Cop9 signalosome complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61140 |
| fragaria_vesca | FvH4_7g13330 |
| malus_domestica | MD01G1050400.v1.1 MD07G1127800.v1.1 |
| prunus_persica | Prupe.2G156700_v2.0.a1 |
| pyrus_communis | pycom07g12320 |
| rosa_chinensis | RchiOBHm_Chr1g0352641 RchiOBHm_Chr7g0198471 |
| rosa_laevigata | RLG00000028324 |
| rosa_multiflora | Rmu_sc0005118.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00302520 |
| rosa_rugosa | Rorug01G0230400 |
| rosa_samantha | Rh1AG243700 Rh1BG214300 Rh1CG227700 Rh1DG240400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 198 |
| AfaI | GTAC | 2 cut(s) | 136, 243 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 196 |
| AflIII | ACRYGT | 1 cut(s) | 131 |
| AluBI | AGCT | 3 cut(s) | 84, 213, 251 |
| AluI | AGCT | 3 cut(s) | 84, 213, 251 |
| Alw26I | GTCTC | 1 cut(s) | 180 |
| AoxI | GGCC | 1 cut(s) | 114 |
| AspS9I | GGNCC | 1 cut(s) | 177 |
| AsuII | TTCGAA | 1 cut(s) | 18 |
| AvaII | GGWCC | 1 cut(s) | 177 |
| BccI | CCATC | 2 cut(s) | 132, 264 |
| BcoDI | GTCTC | 1 cut(s) | 180 |
| BfmI | CTRYAG | 1 cut(s) | 194 |
| BfuAI | ACCTGC | 1 cut(s) | 198 |
| Bme18I | GGWCC | 1 cut(s) | 177 |
| BmgT120I | GGNCC | 1 cut(s) | 177 |
| BmiI | GGNNCC | 1 cut(s) | 33 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 197, 229 |
| BpmI | CTGGAG | 1 cut(s) | 131 |
| Bpu14I | TTCGAA | 1 cut(s) | 18 |
| BsaI | GGTCTC | 1 cut(s) | 180 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 196 |
| Bse1I | ACTGG | 2 cut(s) | 33, 114 |
| BseGI | GGATG | 1 cut(s) | 275 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BseNI | ACTGG | 2 cut(s) | 33, 114 |
| BseRI | GAGGAG | 1 cut(s) | 133 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 196 |
| BsmAI | GTCTC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bso31I | GGTCTC | 1 cut(s) | 180 |
| Bsp119I | TTCGAA | 1 cut(s) | 18 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BspLI | GGNNCC | 1 cut(s) | 33 |
| BspMI | ACCTGC | 1 cut(s) | 198 |
| BspT104I | TTCGAA | 1 cut(s) | 18 |
| BspTNI | GGTCTC | 1 cut(s) | 180 |
| BsrI | ACTGG | 2 cut(s) | 33, 114 |
| BstBI | TTCGAA | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 194 |
| BstF5I | GGATG | 1 cut(s) | 275 |
| BstMAI | GTCTC | 1 cut(s) | 180 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 81 |
| BstNSI | RCATGY | 3 cut(s) | 8, 49, 135 |
| BstSFI | CTRYAG | 1 cut(s) | 194 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BtsCI | GGATG | 1 cut(s) | 275 |
| BtsIMutI | CAGTG | 2 cut(s) | 26, 101 |
| BveI | ACCTGC | 1 cut(s) | 198 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 1 cut(s) | 177 |
| Csp6I | GTAC | 2 cut(s) | 135, 242 |
| CviAII | CATG | 5 cut(s) | 5, 9, 46, 132, 216 |
| CviJI | RGCY | 4 cut(s) | 84, 116, 213, 251 |
| CviKI_1 | RGCY | 4 cut(s) | 84, 116, 213, 251 |
| CviQI | GTAC | 2 cut(s) | 135, 242 |
| Eco31I | GGTCTC | 1 cut(s) | 180 |
| Eco47I | GGWCC | 1 cut(s) | 177 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 194 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 10 |
| FaeI | CATG | 5 cut(s) | 8, 12, 49, 135, 219 |
| FatI | CATG | 5 cut(s) | 4, 8, 45, 131, 215 |
| FokI | GGATG | 1 cut(s) | 282 |
| GsuI | CTGGAG | 1 cut(s) | 131 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| Hin1II | CATG | 5 cut(s) | 8, 12, 49, 135, 219 |
| HindIII | AAGCTT | 1 cut(s) | 82 |
| HinfI | GANTC | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 8, 45 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 81 |
| Hsp92II | CATG | 5 cut(s) | 8, 12, 49, 135, 219 |
| LpnPI | CCDG | 4 cut(s) | 14, 95, 182, 203 |
| MfeI | CAATTG | 1 cut(s) | 289 |
| MluCI | AATT | 1 cut(s) | 289 |
| MlyI | GAGTC | 1 cut(s) | 134 |
| MmeI | TCCRAC | 2 cut(s) | 204, 247 |
| MnlI | CCTC | 2 cut(s) | 106, 154 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 10 |
| MunI | CAATTG | 1 cut(s) | 289 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 81 |
| NlaIII | CATG | 5 cut(s) | 8, 12, 49, 135, 219 |
| NlaIV | GGNNCC | 1 cut(s) | 33 |
| NsiI | ATGCAT | 2 cut(s) | 6, 10 |
| NspI | RCATGY | 3 cut(s) | 8, 49, 135 |
| NspV | TTCGAA | 1 cut(s) | 18 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PciI | ACATGT | 1 cut(s) | 131 |
| PleI | GAGTC | 1 cut(s) | 134 |
| PpsI | GAGTC | 1 cut(s) | 134 |
| PscI | ACATGT | 1 cut(s) | 131 |
| PspN4I | GGNNCC | 1 cut(s) | 33 |
| PspPI | GGNCC | 1 cut(s) | 177 |
| RsaI | GTAC | 2 cut(s) | 136, 243 |
| RsaNI | GTAC | 2 cut(s) | 135, 242 |
| Sau96I | GGNCC | 1 cut(s) | 177 |
| SchI | GAGTC | 1 cut(s) | 134 |
| SetI | ASST | 4 cut(s) | 86, 192, 215, 253 |
| SfcI | CTRYAG | 1 cut(s) | 194 |
| SfuI | TTCGAA | 1 cut(s) | 18 |
| SinI | GGWCC | 1 cut(s) | 177 |
| SphI | GCATGC | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 289 |
| TaqI | TCGA | 1 cut(s) | 18 |
| TasI | AATT | 1 cut(s) | 289 |
| TatI | WGTACW | 1 cut(s) | 241 |
| TscAI | CASTG | 2 cut(s) | 33, 108 |
| TspDTI | ATGAA | 1 cut(s) | 297 |
| TspGWI | ACGGA | 1 cut(s) | 198 |
| TspRI | CASTG | 2 cut(s) | 33, 108 |
| VpaK11BI | GGWCC | 1 cut(s) | 177 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 194 |
| XceI | RCATGY | 3 cut(s) | 8, 49, 135 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 10 |