Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0015176

Physical Location & Seq

Genomic Coordinates Forward (+)

45634180 .. 45637640

Gene Structure 3461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG240400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGACGCCGACGACGAGACCTCCGGACCGATGATCGACGACGAGATCTATGCCAACGGCGACGGGGGGGAAGACGAGAAGCGCAACCGTCCCATCATCTCCGGCGAGCCGCTCGACGTGGAGGCCTACGCGAGCCTCTACAGCGGGCGCACTAAGATCTCGCGGCTGCTGTTCATCGCCGACCACAGCCGGGGCAACGAGGCGGTGGAGCTGGAGGCGCTGCGGATGGCCTACGACGAAATCAAGAAGGGCGAGAACACGCAGTGGTTAAGAGACGTGGCGCAGAGGATCGATGGGAGGTTGGGGCCGGAGTATCAGATGGACTTGGCTTGGTGCGAGTCTGTGGATAGGAGAGCCGAGCAGAAAAGGGAGAAGCTTGAGAACGAGCTCAATGCTTACAGGACAAATCTGATCAAAGAAAGCATAAGAATGGGCTACAATGATTTTGGAGATTTTCATTATTCTCATGGGCAACTGGGGGATGCTTTTAAGAACTATGTTCGTACTCGTGATTATTGTACTACATCAAAGCATATTGTTCATATGTGCATGTGTTCCATTCTGGTCAGCATAGAGATGGGTCAATTTACTCATGTCGCAAGCTATGTTAGCAAAGCAGAACAAACACCAGAAGCTCTGGACACAATTACTGTTGCAAAACTTCGCTGTGCTGCTGGATTGGCTCTCTTGGAAGCTAAGAAATACAAGCTTGCTGCTCGTAAGTTCTTGGAAACTGGGCATGAGTTAGGAAACCACTACAATGAAGTCATTGCACCTCAAGATATTGCAACGTATGGTGGGCTTTGTGCACTTGCAAGTTTTGACCGAACGGAGCTGAAGAACAAAGTTATAGACAACCTGAATTTCCGGAACTTTTTAGAATTGGTGCCTGAAATAAGGGAGATCATCAATGATTTCTACTCGAGCCGTTATGCTTCATGCTTGGACTACCTCGAGAATCTCAAAGCTAACTTGTTGCTGGACATCCATTTGCATGACCACCTTGAAACACTCTATGACCAGATCCGCAACAAGGCCCTTATACAGTACACACACCCCTTTGTGTCTGTAGATCTAAACATGATGGCCAATGCTTTCAAAACTGATGTTGCTGGGCTGGAGAAAGAACTTGAAGCTTTGATCACCGACAACCAAGTTCAGGCTCGTATAGACTCTCACAACAAAATTCTATATGCACGGCATGCGGATCAAAGGAATGCAACTTTCCAGCGGGCCCTACAGACAGGGAATGAGTTTGATCGGGATGTGAAGTCGATGCTGCTCAGGGTAAATCTTATCAAGCACGAAATCAATCTTAAGCAATCAAAGAAGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000338 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009651 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070646 GO:0070647 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PCI RPN7

Protein Analysis

445

Amino Acids

50.93

Weight (kDa)

5.59

Isoelectric Point (pI)

33.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPN7	PF10602	108 - 282	4.1e-55	26S proteasome subunit RPN7
PCI	PF01399	319 - 400	1.4e-17	PCI domain
CSN1_C	PF21151	404 - 429	1.1e-09	COP9 signalosome complex subunit 1, C-terminal helix

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61140
fragaria_vesca	FvH4_7g13330
malus_domestica	MD01G1050400.v1.1 MD07G1127800.v1.1
prunus_persica	Prupe.2G156700_v2.0.a1
pyrus_communis	pycom07g12320
rosa_chinensis	RchiOBHm_Chr1g0352641 RchiOBHm_Chr7g0198471
rosa_laevigata	RLG00000028324
rosa_multiflora	Rmu_sc0005118.1_g000005
rosa_roxburghii	Rroxscaffold_4G00302520
rosa_rugosa	Rorug01G0230400
rosa_samantha	Rh1AG243700 Rh1BG214300 Rh1CG227700 Rh1DG240400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	886
AccBSI	CCGCTC	1 cut(s)	112
AccII	CGCG	2 cut(s)	131, 163
AccIII	TCCGGA	2 cut(s)	23, 867
AciI	CCGC	8 cut(s)	110, 144, 163, 203, 223, 1027, 1205, 1231
AclWI	GGATC	3 cut(s)	296, 1018, 1215
AcoI	YGGCCR	1 cut(s)	1086
AcsI	RAATTY	2 cut(s)	862, 1185
AcuI	CTGAAG	1 cut(s)	857
AcyI	GRCGYC	1 cut(s)	6
AdeI	CACNNNGTG	1 cut(s)	264
AfaI	GTAC	3 cut(s)	505, 520, 1049
AfiI	CCNNNNNNNGG	3 cut(s)	190, 1033, 1159
AflII	CTTAAG	1 cut(s)	1316
AgsI	TTSAA	3 cut(s)	1007, 1099, 1133
AjiI	CACGTC	2 cut(s)	118, 277
Alw21I	GWGCWC	2 cut(s)	390, 811
Alw26I	GTCTC	2 cut(s)	11, 267
Alw44I	GTGCAC	1 cut(s)	807
AlwI	GGATC	3 cut(s)	296, 1018, 1215
Ama87I	CYCGRG	2 cut(s)	922, 953
Aor13HI	TCCGGA	2 cut(s)	23, 867
AoxI	GGCC	6 cut(s)	123, 228, 305, 1035, 1086, 1233
ApaI	GGGCCC	1 cut(s)	1237
ApaLI	GTGCAC	1 cut(s)	807
ApeKI	GCWGC	5 cut(s)	166, 220, 671, 713, 1279
ApoI	RAATTY	2 cut(s)	862, 1185
AspLEI	GCGC	4 cut(s)	84, 150, 220, 283
AspS9I	GGNCC	5 cut(s)	26, 305, 1036, 1233, 1234
AsuC2I	CCSGG	1 cut(s)	191
AsuHPI	GGTGA	1 cut(s)	1135
AvaI	CYCGRG	2 cut(s)	922, 953
AvaII	GGWCC	1 cut(s)	26
BaeGI	GKGCMC	2 cut(s)	811, 1237
BalI	TGGCCA	1 cut(s)	1088
BanI	GGYRCC	1 cut(s)	886
BanII	GRGCYC	2 cut(s)	390, 1237
BauI	CACGAG	1 cut(s)	507
BbsI	GAAGAC	1 cut(s)	78
Bbv12I	GWGCWC	2 cut(s)	390, 811
BbvI	GCAGC	5 cut(s)	153, 207, 658, 700, 1266
BccI	CCATC	6 cut(s)	101, 220, 287, 313, 571, 1078
BceAI	ACGGC	3 cut(s)	73, 912, 1214
BcgI	CGANNNNNNTGC	4 cut(s)	32, 66, 374, 408
BclI	TGATCA	2 cut(s)	411, 1140
BcnI	CCSGG	1 cut(s)	191
BcoDI	GTCTC	2 cut(s)	11, 267
BfmI	CTRYAG	3 cut(s)	139, 1068, 1238
BfoI	RGCGCY	1 cut(s)	221
BfrI	CTTAAG	1 cut(s)	1316
BglII	AGATCT	3 cut(s)	45, 156, 1072
BisI	GCNGC	7 cut(s)	110, 164, 167, 221, 672, 714, 1280
BlsI	GCNGC	7 cut(s)	111, 165, 168, 222, 673, 715, 1281
Bme1390I	CCNGG	1 cut(s)	191
Bme18I	GGWCC	1 cut(s)	26
BmeT110I	CYCGRG	2 cut(s)	922, 953
BmgBI	CACGTC	2 cut(s)	118, 277
BmgT120I	GGNCC	5 cut(s)	26, 305, 1036, 1233, 1234
BmiI	GGNNCC	3 cut(s)	306, 888, 1235
BmrFI	CCNGG	1 cut(s)	191
BmrI	ACTGGG	2 cut(s)	485, 744
BmsI	GCATC	2 cut(s)	472, 1266
BmuI	ACTGGG	2 cut(s)	485, 744
BpiI	GAAGAC	1 cut(s)	78
BpmI	CTGGAG	2 cut(s)	233, 1139
Bpu10I	CCTNAGC	1 cut(s)	1283
BpuEI	CTTGAG	2 cut(s)	398, 762
BpuMI	CCSGG	1 cut(s)	191
Bsa29I	ATCGAT	1 cut(s)	291
BsaHI	GRCGYC	1 cut(s)	6
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	1 cut(s)	190
BsaWI	WCCGGW	2 cut(s)	23, 867
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	3 cut(s)	190, 1033, 1159
Bse1I	ACTGG	2 cut(s)	480, 739
Bse3DI	GCAATG	1 cut(s)	768
BseAI	TCCGGA	2 cut(s)	23, 867
BseCI	ATCGAT	1 cut(s)	291
BseDI	CCNNGG	1 cut(s)	190
BseGI	GGATG	4 cut(s)	231, 487, 984, 1270
BseLI	CCNNNNNNNGG	3 cut(s)	190, 1033, 1159
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	1 cut(s)	1297
BseNI	ACTGG	2 cut(s)	480, 739
BseSI	GKGCMC	2 cut(s)	811, 1237
BseXI	GCAGC	5 cut(s)	153, 207, 658, 700, 1266
BseYI	CCCAGC	1 cut(s)	1112
Bsh1236I	CGCG	2 cut(s)	131, 163
BshFI	GGCC	6 cut(s)	125, 230, 307, 1037, 1088, 1235
BshNI	GGYRCC	1 cut(s)	886
BshVI	ATCGAT	1 cut(s)	291
BsiHKAI	GWGCWC	2 cut(s)	390, 811
BsiHKCI	CYCGRG	2 cut(s)	922, 953
BsiSI	CCGG	5 cut(s)	24, 102, 190, 308, 868
BslFI	GGGAC	1 cut(s)	75
BslI	CCNNNNNNNGG	3 cut(s)	190, 1033, 1159
BsmAI	GTCTC	2 cut(s)	11, 267
BsmBI	CGTCTC	1 cut(s)	267
BsmFI	GGGAC	1 cut(s)	75
BsmI	GAATGC	1 cut(s)	1222
BsnI	GGCC	6 cut(s)	125, 230, 307, 1037, 1088, 1235
Bso31I	GGTCTC	1 cut(s)	11
BsoBI	CYCGRG	2 cut(s)	922, 953
Bsp120I	GGGCCC	1 cut(s)	1233
Bsp1286I	GDGCHC	3 cut(s)	390, 811, 1237
Bsp13I	TCCGGA	2 cut(s)	23, 867
BspACI	CCGC	8 cut(s)	110, 144, 163, 203, 223, 1027, 1205, 1231
BspANI	GGCC	6 cut(s)	125, 230, 307, 1037, 1088, 1235
BspCNI	CTCAG	1 cut(s)	1296
BspDI	ATCGAT	1 cut(s)	291
BspEI	TCCGGA	2 cut(s)	23, 867
BspFNI	CGCG	2 cut(s)	131, 163
BspLI	GGNNCC	3 cut(s)	306, 888, 1235
BspPI	GGATC	3 cut(s)	296, 1018, 1215
BspT107I	GGYRCC	1 cut(s)	886
BspTI	CTTAAG	1 cut(s)	1316
BspTNI	GGTCTC	1 cut(s)	11
BsrBI	CCGCTC	1 cut(s)	112
BsrDI	GCAATG	1 cut(s)	768
BsrI	ACTGG	2 cut(s)	480, 739
BssECI	CCNNGG	1 cut(s)	190
BssNI	GRCGYC	1 cut(s)	6
BssSI	CACGAG	1 cut(s)	507
Bst2BI	CACGAG	1 cut(s)	507
Bst4CI	ACNGT	3 cut(s)	89, 652, 1047
BstACI	GRCGYC	1 cut(s)	6
BstAFI	CTTAAG	1 cut(s)	1316
BstAPI	GCANNNNNTGC	1 cut(s)	1202
BstC8I	GCNNGC	7 cut(s)	107, 133, 146, 601, 711, 1203, 1233
BstDEI	CTNAG	3 cut(s)	153, 696, 1283
BstF5I	GGATG	4 cut(s)	231, 487, 984, 1270
BstFNI	CGCG	2 cut(s)	131, 163
BstH2I	RGCGCY	1 cut(s)	221
BstHHI	GCGC	4 cut(s)	84, 150, 220, 283
BstMAI	GTCTC	2 cut(s)	11, 267
BstMWI	GCNNNNNNNGC	5 cut(s)	141, 217, 609, 680, 1202
BstNSI	RCATGY	2 cut(s)	553, 1205
BstSCI	CCNGG	1 cut(s)	189
BstSFI	CTRYAG	3 cut(s)	139, 1068, 1238
BstSLI	GKGCMC	2 cut(s)	811, 1237
BstUI	CGCG	2 cut(s)	131, 163
BstV1I	GCAGC	5 cut(s)	153, 207, 658, 700, 1266
BstV2I	GAAGAC	1 cut(s)	78
BstX2I	RGATCY	4 cut(s)	45, 156, 1023, 1072
BstYI	RGATCY	4 cut(s)	45, 156, 1023, 1072
Bsu15I	ATCGAT	1 cut(s)	291
BsuRI	GGCC	6 cut(s)	125, 230, 307, 1037, 1088, 1235
BsuTUI	ATCGAT	1 cut(s)	291
BtgZI	GCGATG	1 cut(s)	160
BtrI	CACGTC	2 cut(s)	118, 277
BtsCI	GGATG	4 cut(s)	231, 487, 984, 1270
BtsI	GCAGTG	1 cut(s)	269
BtsIMutI	CAGTG	1 cut(s)	269
Cac8I	GCNNGC	7 cut(s)	107, 133, 146, 601, 711, 1203, 1233
CfoI	GCGC	4 cut(s)	84, 150, 220, 283
Cfr13I	GGNCC	5 cut(s)	26, 305, 1036, 1233, 1234
ClaI	ATCGAT	1 cut(s)	291
CpoI	CGGWCCG	1 cut(s)	26
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	3 cut(s)	504, 519, 1048
CspI	CGGWCCG	1 cut(s)	26
CviAII	CATG	8 cut(s)	467, 550, 593, 740, 939, 995, 1081, 1202
CviQI	GTAC	3 cut(s)	504, 519, 1048
DdeI	CTNAG	3 cut(s)	153, 696, 1283
DraIII	CACNNNGTG	1 cut(s)	264
EaeI	YGGCCR	1 cut(s)	1086
Ecl136II	GAGCTC	1 cut(s)	388
Eco147I	AGGCCT	1 cut(s)	125
Eco24I	GRGCYC	2 cut(s)	390, 1237
Eco31I	GGTCTC	1 cut(s)	11
Eco47I	GGWCC	1 cut(s)	26
Eco53kI	GAGCTC	1 cut(s)	388
Eco57I	CTGAAG	1 cut(s)	857
Eco88I	CYCGRG	2 cut(s)	922, 953
EcoICRI	GAGCTC	1 cut(s)	388
EcoO109I	RGGNCCY	2 cut(s)	1036, 1234
EcoT38I	GRGCYC	2 cut(s)	390, 1237
Esp3I	CGTCTC	1 cut(s)	267
FaeI	CATG	8 cut(s)	470, 553, 596, 743, 942, 998, 1084, 1205
FaqI	GGGAC	1 cut(s)	75
FatI	CATG	8 cut(s)	466, 549, 592, 739, 938, 994, 1080, 1201
FauI	CCCGC	2 cut(s)	137, 1224
FauNDI	CATATG	1 cut(s)	543
FbaI	TGATCA	2 cut(s)	411, 1140
Fnu4HI	GCNGC	7 cut(s)	110, 164, 167, 221, 672, 714, 1280
FokI	GGATG	4 cut(s)	238, 494, 971, 1277
FriOI	GRGCYC	2 cut(s)	390, 1237
Fsp4HI	GCNGC	7 cut(s)	110, 164, 167, 221, 672, 714, 1280
GlaI	GCGC	4 cut(s)	83, 149, 219, 282
GluI	GCNGC	7 cut(s)	110, 164, 167, 221, 672, 714, 1280
GsaI	CCCAGC	1 cut(s)	1116
GsuI	CTGGAG	2 cut(s)	233, 1139
HaeII	RGCGCY	1 cut(s)	221
HaeIII	GGCC	6 cut(s)	125, 230, 307, 1037, 1088, 1235
HapII	CCGG	5 cut(s)	24, 102, 190, 308, 868
HgaI	GACGC	1 cut(s)	14
HhaI	GCGC	4 cut(s)	84, 150, 220, 283
Hin1I	GRCGYC	1 cut(s)	6
Hin1II	CATG	8 cut(s)	470, 553, 596, 743, 942, 998, 1084, 1205
Hin6I	GCGC	4 cut(s)	82, 148, 218, 281
HinP1I	GCGC	4 cut(s)	82, 148, 218, 281
HindIII	AAGCTT	3 cut(s)	374, 707, 1134
HinfI	GANTC	3 cut(s)	338, 958, 1172
HpaII	CCGG	5 cut(s)	24, 102, 190, 308, 868
HphI	GGTGA	1 cut(s)	1135
Hpy166II	GTNNAC	2 cut(s)	809, 1050
Hpy188I	TCNGA	2 cut(s)	318, 411
Hpy188III	TCNNGA	9 cut(s)	24, 244, 509, 638, 779, 868, 955, 1262, 1335
Hpy8I	GTNNAC	2 cut(s)	809, 1050
Hpy99I	CGWCG	7 cut(s)	14, 17, 41, 44, 65, 119, 239
HpyAV	CCTTC	1 cut(s)	241
HpyCH4III	ACNGT	3 cut(s)	89, 652, 1047
HpyCH4IV	ACGT	3 cut(s)	117, 276, 791
HpyCH4V	TGCA	9 cut(s)	549, 656, 773, 788, 809, 815, 994, 1196, 1220
HpyF10VI	GCNNNNNNNGC	5 cut(s)	141, 217, 609, 680, 1202
HpyF3I	CTNAG	3 cut(s)	153, 696, 1283
HpySE526I	ACGT	3 cut(s)	117, 276, 791
Hsp92I	GRCGYC	1 cut(s)	6
Hsp92II	CATG	8 cut(s)	470, 553, 596, 743, 942, 998, 1084, 1205
HspAI	GCGC	4 cut(s)	82, 148, 218, 281
Kpn2I	TCCGGA	2 cut(s)	23, 867
Ksp22I	TGATCA	2 cut(s)	411, 1140
LmnI	GCTCC	2 cut(s)	208, 832
Lsp1109I	GCAGC	5 cut(s)	153, 207, 658, 700, 1266
LweI	GCATC	2 cut(s)	472, 1266
MaeII	ACGT	3 cut(s)	117, 276, 791
MbiI	CCGCTC	1 cut(s)	112
MboII	GAAGA	2 cut(s)	83, 850
MflI	RGATCY	4 cut(s)	45, 156, 1023, 1072
MhlI	GDGCHC	3 cut(s)	390, 811, 1237
MlsI	TGGCCA	1 cut(s)	1088
MluCI	AATT	5 cut(s)	584, 645, 862, 881, 1185
MluNI	TGGCCA	1 cut(s)	1088
MlyI	GAGTC	2 cut(s)	347, 1166
MnlI	CCTC	9 cut(s)	31, 115, 146, 193, 208, 279, 291, 786, 962
Mox20I	TGGCCA	1 cut(s)	1088
MroI	TCCGGA	2 cut(s)	23, 867
MscI	TGGCCA	1 cut(s)	1088
MseI	TTAA	3 cut(s)	269, 489, 1317
MslI	CAYNNNNRTG	4 cut(s)	428, 575, 759, 993
Msp20I	TGGCCA	1 cut(s)	1088
MspA1I	CMGCKG	2 cut(s)	144, 1231
MspCI	CTTAAG	1 cut(s)	1316
MspI	CCGG	5 cut(s)	24, 102, 190, 308, 868
MspR9I	CCNGG	1 cut(s)	191
Mva1269I	GAATGC	1 cut(s)	1222
MvnI	CGCG	2 cut(s)	131, 163
MwoI	GCNNNNNNNGC	5 cut(s)	141, 217, 609, 680, 1202
NciI	CCSGG	1 cut(s)	191
NdeI	CATATG	1 cut(s)	543
NlaIII	CATG	8 cut(s)	470, 553, 596, 743, 942, 998, 1084, 1205
NlaIV	GGNNCC	3 cut(s)	306, 888, 1235
NmeAIII	GCCGAG	1 cut(s)	382
NspI	RCATGY	2 cut(s)	553, 1205
PaeI	GCATGC	1 cut(s)	1205
PaeR7I	CTCGAG	2 cut(s)	922, 953
PceI	AGGCCT	1 cut(s)	125
PcsI	WCGNNNNNNNCGW	1 cut(s)	12
PctI	GAATGC	1 cut(s)	1222
PfeI	GAWTC	1 cut(s)	958
PkrI	GCNGC	7 cut(s)	111, 165, 168, 222, 673, 715, 1281
PleI	GAGTC	2 cut(s)	346, 1166
PpsI	GAGTC	2 cut(s)	346, 1166
Psp124BI	GAGCTC	1 cut(s)	390
PspFI	CCCAGC	1 cut(s)	1112
PspN4I	GGNNCC	3 cut(s)	306, 888, 1235
PspOMI	GGGCCC	1 cut(s)	1233
PspPI	GGNCC	5 cut(s)	26, 305, 1036, 1233, 1234
PspXI	VCTCGAGB	1 cut(s)	922
PsuI	RGATCY	4 cut(s)	45, 156, 1023, 1072
RsaI	GTAC	3 cut(s)	505, 520, 1049
RsaNI	GTAC	3 cut(s)	504, 519, 1048
RseI	CAYNNNNRTG	4 cut(s)	428, 575, 759, 993
Rsr2I	CGGWCCG	1 cut(s)	26
RsrII	CGGWCCG	1 cut(s)	26
SacI	GAGCTC	1 cut(s)	390
SaqAI	TTAA	3 cut(s)	269, 489, 1317
SatI	GCNGC	7 cut(s)	110, 164, 167, 221, 672, 714, 1280
Sau96I	GGNCC	5 cut(s)	26, 305, 1036, 1233, 1234
SchI	GAGTC	2 cut(s)	347, 1166
ScrFI	CCNGG	1 cut(s)	191
SduI	GDGCHC	3 cut(s)	390, 811, 1237
SfaNI	GCATC	2 cut(s)	472, 1266
SfcI	CTRYAG	3 cut(s)	139, 1068, 1238
Sfr274I	CTCGAG	2 cut(s)	922, 953
SinI	GGWCC	1 cut(s)	26
SlaI	CTCGAG	2 cut(s)	922, 953
SmiMI	CAYNNNNRTG	4 cut(s)	428, 575, 759, 993
SmlI	CTYRAG	5 cut(s)	377, 777, 922, 953, 1316
SmoI	CTYRAG	5 cut(s)	377, 777, 922, 953, 1316
SphI	GCATGC	1 cut(s)	1205
Sse9I	AATT	5 cut(s)	584, 645, 862, 881, 1185
SseBI	AGGCCT	1 cut(s)	125
SsiI	CCGC	8 cut(s)	110, 144, 163, 203, 223, 1027, 1205, 1231
SstI	GAGCTC	1 cut(s)	390
StuI	AGGCCT	1 cut(s)	125
StyD4I	CCNGG	1 cut(s)	189
TaaI	ACNGT	3 cut(s)	89, 652, 1047
TaiI	ACGT	3 cut(s)	120, 279, 794
TaqI	TCGA	6 cut(s)	36, 114, 291, 923, 954, 1274
TaqII	GACCGA	2 cut(s)	43, 840
TasI	AATT	5 cut(s)	584, 645, 862, 881, 1185
TatI	WGTACW	2 cut(s)	518, 1047
TauI	GCSGC	2 cut(s)	112, 166
TfiI	GAWTC	1 cut(s)	958
Tru1I	TTAA	3 cut(s)	269, 489, 1317
Tru9I	TTAA	3 cut(s)	269, 489, 1317
TscAI	CASTG	1 cut(s)	269
TseI	GCWGC	5 cut(s)	166, 220, 671, 713, 1279
TspDTI	ATGAA	5 cut(s)	163, 446, 530, 777, 927
TspGWI	ACGGA	1 cut(s)	845
TspRI	CASTG	1 cut(s)	269
Vha464I	CTTAAG	1 cut(s)	1316
VneI	GTGCAC	1 cut(s)	807
VpaK11BI	GGWCC	1 cut(s)	26
XapI	RAATTY	2 cut(s)	862, 1185
XceI	RCATGY	2 cut(s)	553, 1205
XhoI	CTCGAG	2 cut(s)	922, 953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.