Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0015176

Physical Location & Seq

Genomic Coordinates Reverse (-)

18152208 .. 18156666

Gene Structure 4459 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1127800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGAAGGCGACGACGATACATCGGGACCAATGATCGACGATGAGATCTACGCCAACGGCGTCGATGGAGACAACGAGAAGCGGAGCCGACCCATCATCAGCAGCGAGCAACTCGACATCGAGGCCTACGCGAGCCTCTACAGCGGCCGCACCAAGATCATGCGCCTCCTTTTCATCGCCCAGAGGAGCCAGAGCAACGAGGCTATGGAGCTGGAGGCGCTCCGCATGGCCTACGACGAAATTAAGAAGGGGGAGAACACCCAGTTGCACAGGGAGGTCGTGCAGAAGATCGCCGGTCGATTGGGGCCGGAGTACGGAATGGACGTCGCTTGGTGCGACACTGTGGATAGGAGGGCCGAGCAGAAGAAGGAGAAGCTCGAGAACGAGCTCAATGCCTACAGGACAAATCTGATCAAAGAAAGCATAAGAATGGGTTACAATGATTTTGGAGATTTTTATTATGCTCATGGTCAACTTGGGGATGCTTTTAAAAGTTATGTTCGGACTCGTGATTATTGCACTACGTCAAAGCATATTGTTCACATGTGCATGAGTTCAACTCTGGTCAGCATCGAGATGGGTCAATTTACTCATGTCACAAGCTATATTACCAAAGCAGAGCAAATACCAGATGCCCTTGACCCTGTCACTGTGGCTAAACTTCGTTGTGCTGCTGGATTGGCTCACTTGGAATCTAAAAAATACAAACTTGCTGCTCGTAAGTTTCTGGAAACTGGGCCTGAATTAGGAAACCACTACAATGAAGTGATTGCTCCTCAAGATGTTGCAACATATGGTGGGCTTTGTGCACTTGCAACTTTTGACAGAATGGAGCTTAAGAACAAAGTTATAGACAACCTGAATTTCCGGAATTTTTTAGAGTTAGTACCTGAAGTCAGGGAGCTTATCAATGATTTCTACTCAAGCCATTATGCTTCATGCCTGGATTACCTTGGGAATCTCAAAGCAAATTTGCTGCTTGACATCCATTTGCATGATCACCTTGAGACACTCTATGGCCAGATCCGCCACAAGGCTCTCATCCAGTATACGCACCCCTTTGTGTCGGTAGATTTACACATGATGGCCAATGCTTTCAAAACTGATGTTGCAGGGCTTGAGAAAGAACTTGAAGCTTTGATCACTGACAACCAAGTCCAGGCTAGAATTGACTCGCACAACAAAATCCTCTATGCACGACATGCAGATCAAAGGAATGCAACTTTTCAACGGGTGCTACAGACAGGGAATGAGTTTGATCGGGATGTTAAGTCTATGCTCCTTAGGGTAAATCTTATAAAGCATGAGCACAATCTCAGGGCATCAAGGAAACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000338 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009651 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070646 GO:0070647 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PCI RPN7

Protein Analysis

446

Amino Acids

50.92

Weight (kDa)

6.03

Isoelectric Point (pI)

35.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPN7	PF10602	108 - 282	1.4e-55	26S proteasome subunit RPN7
PCI	PF01399	321 - 400	2.4e-17	PCI domain
CSN1_C	PF21151	404 - 429	5.3e-09	COP9 signalosome complex subunit 1, C-terminal helix

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61140
fragaria_vesca	FvH4_7g13330
malus_domestica	MD01G1050400.v1.1 MD07G1127800.v1.1
prunus_persica	Prupe.2G156700_v2.0.a1
pyrus_communis	pycom07g12320
rosa_chinensis	RchiOBHm_Chr1g0352641 RchiOBHm_Chr7g0198471
rosa_laevigata	RLG00000028324
rosa_multiflora	Rmu_sc0005118.1_g000005
rosa_roxburghii	Rroxscaffold_4G00302520
rosa_rugosa	Rorug01G0230400
rosa_samantha	Rh1AG243700 Rh1BG214300 Rh1CG227700 Rh1DG240400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1298
AasI	GACNNNNNNGTC	1 cut(s)	1154
AatII	GACGTC	1 cut(s)	327
AccI	GTMKAC	1 cut(s)	1049
AccII	CGCG	1 cut(s)	131
AccIII	TCCGGA	1 cut(s)	867
AciI	CCGC	5 cut(s)	82, 144, 148, 223, 1027
AclWI	GGATC	1 cut(s)	1018
AcoI	YGGCCR	3 cut(s)	145, 1018, 1086
AcsI	RAATTY	3 cut(s)	862, 871, 970
AcuI	CTGAAG	1 cut(s)	912
AcyI	GRCGYC	2 cut(s)	60, 324
AfaI	GTAC	2 cut(s)	314, 888
AfiI	CCNNNNNNNGG	4 cut(s)	314, 746, 1033, 1159
AflII	CTTAAG	1 cut(s)	836
AflIII	ACRYGT	1 cut(s)	543
AgsI	TTSAA	4 cut(s)	558, 1099, 1133, 1229
AjnI	CCWGG	2 cut(s)	942, 1158
AluBI	AGCT	7 cut(s)	211, 376, 388, 603, 835, 904, 1136
AluI	AGCT	7 cut(s)	211, 376, 388, 603, 835, 904, 1136
Alw21I	GWGCWC	3 cut(s)	390, 811, 1311
Alw26I	GTCTC	2 cut(s)	63, 1001
Alw44I	GTGCAC	1 cut(s)	807
AlwI	GGATC	1 cut(s)	1018
Ama87I	CYCGRG	1 cut(s)	377
Aor13HI	TCCGGA	1 cut(s)	867
AoxI	GGCC	8 cut(s)	123, 145, 228, 305, 354, 737, 1018, 1086
ApaLI	GTGCAC	1 cut(s)	807
ApeKI	GCWGC	4 cut(s)	102, 671, 713, 976
ApoI	RAATTY	3 cut(s)	862, 871, 970
AspLEI	GCGC	2 cut(s)	165, 220
AspS9I	GGNCC	4 cut(s)	26, 305, 354, 737
AsuHPI	GGTGA	1 cut(s)	992
AvaI	CYCGRG	1 cut(s)	377
AvaII	GGWCC	1 cut(s)	26
AxyI	CCTNAGG	1 cut(s)	1283
BaeGI	GKGCMC	1 cut(s)	811
BalI	TGGCCA	2 cut(s)	1020, 1088
BanII	GRGCYC	1 cut(s)	390
BauI	CACGAG	1 cut(s)	507
Bbv12I	GWGCWC	3 cut(s)	390, 811, 1311
BbvI	GCAGC	4 cut(s)	114, 658, 700, 963
BccI	CCATC	4 cut(s)	59, 101, 571, 1078
BceAI	ACGGC	1 cut(s)	73
BcgI	CGANNNNNNTGC	2 cut(s)	374, 408
BciT130I	CCWGG	2 cut(s)	944, 1160
BclI	TGATCA	3 cut(s)	411, 997, 1140
BcoDI	GTCTC	2 cut(s)	63, 1001
BfaI	CTAG	1 cut(s)	1164
BfmI	CTRYAG	3 cut(s)	139, 397, 1238
BfoI	RGCGCY	1 cut(s)	221
BfrI	CTTAAG	1 cut(s)	836
BglII	AGATCT	1 cut(s)	45
BisI	GCNGC	6 cut(s)	103, 145, 148, 672, 714, 977
BlsI	GCNGC	6 cut(s)	104, 146, 149, 673, 715, 978
Bme1390I	CCNGG	2 cut(s)	944, 1160
Bme18I	GGWCC	1 cut(s)	26
BmeT110I	CYCGRG	1 cut(s)	377
BmgT120I	GGNCC	4 cut(s)	26, 305, 354, 737
BmiI	GGNNCC	4 cut(s)	27, 86, 188, 306
BmrFI	CCNGG	2 cut(s)	944, 1160
BmrI	ACTGGG	2 cut(s)	256, 744
BmsI	GCATC	4 cut(s)	472, 579, 622, 1331
BmuI	ACTGGG	2 cut(s)	256, 744
BplI	GAGNNNNNCTC	2 cut(s)	544, 576
BpmI	CTGGAG	1 cut(s)	233
BpuEI	CTTGAG	4 cut(s)	762, 907, 1025, 1139
BsaHI	GRCGYC	2 cut(s)	60, 324
BsaJI	CCNNGG	1 cut(s)	952
BsaWI	WCCGGW	1 cut(s)	867
Bsc4I	CCNNNNNNNGG	4 cut(s)	314, 746, 1033, 1159
Bse118I	RCCGGY	1 cut(s)	293
Bse1I	ACTGG	3 cut(s)	262, 739, 1045
Bse21I	CCTNAGG	1 cut(s)	1283
BseAI	TCCGGA	1 cut(s)	867
BseBI	CCWGG	2 cut(s)	944, 1160
BseDI	CCNNGG	1 cut(s)	952
BseGI	GGATG	4 cut(s)	487, 984, 1041, 1270
BseLI	CCNNNNNNNGG	4 cut(s)	314, 746, 1033, 1159
BseMII	CTCAG	1 cut(s)	1330
BseNI	ACTGG	3 cut(s)	262, 739, 1045
BseRI	GAGGAG	2 cut(s)	199, 765
BseSI	GKGCMC	1 cut(s)	811
BseX3I	CGGCCG	1 cut(s)	145
BseXI	GCAGC	4 cut(s)	114, 658, 700, 963
BsgI	GTGCAG	1 cut(s)	302
Bsh1236I	CGCG	1 cut(s)	131
Bsh1285I	CGRYCG	2 cut(s)	148, 298
BshFI	GGCC	8 cut(s)	125, 147, 230, 307, 356, 739, 1020, 1088
BsiEI	CGRYCG	2 cut(s)	148, 298
BsiHKAI	GWGCWC	3 cut(s)	390, 811, 1311
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	3 cut(s)	294, 308, 868
BslFI	GGGAC	1 cut(s)	39
BslI	CCNNNNNNNGG	4 cut(s)	314, 746, 1033, 1159
BsmAI	GTCTC	2 cut(s)	63, 1001
BsmFI	GGGAC	1 cut(s)	39
BsmI	GAATGC	1 cut(s)	1222
BsnI	GGCC	8 cut(s)	125, 147, 230, 307, 356, 739, 1020, 1088
BsoBI	CYCGRG	1 cut(s)	377
Bsp1286I	GDGCHC	3 cut(s)	390, 811, 1311
Bsp13I	TCCGGA	1 cut(s)	867
BspACI	CCGC	5 cut(s)	82, 144, 148, 223, 1027
BspANI	GGCC	8 cut(s)	125, 147, 230, 307, 356, 739, 1020, 1088
BspCNI	CTCAG	1 cut(s)	1329
BspEI	TCCGGA	1 cut(s)	867
BspFNI	CGCG	1 cut(s)	131
BspLI	GGNNCC	4 cut(s)	27, 86, 188, 306
BspPI	GGATC	1 cut(s)	1018
BspTI	CTTAAG	1 cut(s)	836
BsrFI	RCCGGY	1 cut(s)	293
BsrI	ACTGG	3 cut(s)	262, 739, 1045
BssAI	RCCGGY	1 cut(s)	293
BssECI	CCNNGG	1 cut(s)	952
BssNAI	GTATAC	1 cut(s)	1050
BssNI	GRCGYC	2 cut(s)	60, 324
BssSI	CACGAG	1 cut(s)	507
BssT1I	CCWWGG	1 cut(s)	952
Bst1107I	GTATAC	1 cut(s)	1050
Bst2BI	CACGAG	1 cut(s)	507
Bst2UI	CCWGG	2 cut(s)	944, 1160
Bst4CI	ACNGT	2 cut(s)	343, 652
BstACI	GRCGYC	2 cut(s)	60, 324
BstAFI	CTTAAG	1 cut(s)	836
BstAPI	GCANNNNNTGC	1 cut(s)	1202
BstC8I	GCNNGC	2 cut(s)	107, 133
BstDEI	CTNAG	2 cut(s)	1283, 1316
BstENI	CCTNNNNNAGG	1 cut(s)	744
BstF5I	GGATG	4 cut(s)	487, 984, 1041, 1270
BstFNI	CGCG	1 cut(s)	131
BstH2I	RGCGCY	1 cut(s)	221
BstHHI	GCGC	2 cut(s)	165, 220
BstMAI	GTCTC	2 cut(s)	63, 1001
BstMCI	CGRYCG	2 cut(s)	148, 298
BstMWI	GCNNNNNNNGC	5 cut(s)	141, 217, 680, 1026, 1202
BstNI	CCWGG	2 cut(s)	944, 1160
BstNSI	RCATGY	2 cut(s)	547, 1205
BstSCI	CCNGG	2 cut(s)	942, 1158
BstSFI	CTRYAG	3 cut(s)	139, 397, 1238
BstSLI	GKGCMC	1 cut(s)	811
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	4 cut(s)	114, 658, 700, 963
BstX2I	RGATCY	2 cut(s)	45, 1023
BstYI	RGATCY	2 cut(s)	45, 1023
BstZ17I	GTATAC	1 cut(s)	1050
BstZI	CGGCCG	1 cut(s)	145
Bsu36I	CCTNAGG	1 cut(s)	1283
BsuRI	GGCC	8 cut(s)	125, 147, 230, 307, 356, 739, 1020, 1088
BtgZI	GCGATG	1 cut(s)	160
BtsCI	GGATG	4 cut(s)	487, 984, 1041, 1270
BtsIMutI	CAGTG	4 cut(s)	339, 648, 1143, 1333
Cac8I	GCNNGC	2 cut(s)	107, 133
CciNI	GCGGCCGC	1 cut(s)	145
CfoI	GCGC	2 cut(s)	165, 220
Cfr10I	RCCGGY	1 cut(s)	293
Cfr13I	GGNCC	4 cut(s)	26, 305, 354, 737
CseI	GACGC	1 cut(s)	49
Csp6I	GTAC	2 cut(s)	313, 887
CviQI	GTAC	2 cut(s)	313, 887
DdeI	CTNAG	2 cut(s)	1283, 1316
DraI	TTTAAA	1 cut(s)	490
DrdI	GACNNNNNNGTC	1 cut(s)	1154
DseDI	GACNNNNNNGTC	1 cut(s)	1154
EaeI	YGGCCR	3 cut(s)	145, 1018, 1086
EagI	CGGCCG	1 cut(s)	145
EciI	GGCGGA	1 cut(s)	1016
Ecl136II	GAGCTC	1 cut(s)	388
EclXI	CGGCCG	1 cut(s)	145
Eco130I	CCWWGG	1 cut(s)	952
Eco147I	AGGCCT	1 cut(s)	125
Eco24I	GRGCYC	1 cut(s)	390
Eco47I	GGWCC	1 cut(s)	26
Eco52I	CGGCCG	1 cut(s)	145
Eco53kI	GAGCTC	1 cut(s)	388
Eco57I	CTGAAG	1 cut(s)	912
Eco81I	CCTNAGG	1 cut(s)	1283
Eco88I	CYCGRG	1 cut(s)	377
EcoICRI	GAGCTC	1 cut(s)	388
EcoNI	CCTNNNNNAGG	1 cut(s)	744
EcoRII	CCWGG	2 cut(s)	942, 1158
EcoT14I	CCWWGG	1 cut(s)	952
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	1 cut(s)	952
FaqI	GGGAC	1 cut(s)	39
FauNDI	CATATG	1 cut(s)	793
FbaI	TGATCA	3 cut(s)	411, 997, 1140
FblI	GTMKAC	1 cut(s)	1049
Fnu4HI	GCNGC	6 cut(s)	103, 145, 148, 672, 714, 977
FokI	GGATG	4 cut(s)	494, 971, 1028, 1277
FriOI	GRGCYC	1 cut(s)	390
Fsp4HI	GCNGC	6 cut(s)	103, 145, 148, 672, 714, 977
FspBI	CTAG	1 cut(s)	1164
GlaI	GCGC	2 cut(s)	164, 219
GluI	GCNGC	6 cut(s)	103, 145, 148, 672, 714, 977
GsuI	CTGGAG	1 cut(s)	233
HaeII	RGCGCY	1 cut(s)	221
HaeIII	GGCC	8 cut(s)	125, 147, 230, 307, 356, 739, 1020, 1088
HapII	CCGG	3 cut(s)	294, 308, 868
HgaI	GACGC	1 cut(s)	49
HhaI	GCGC	2 cut(s)	165, 220
Hin1I	GRCGYC	2 cut(s)	60, 324
Hin6I	GCGC	2 cut(s)	163, 218
HinP1I	GCGC	2 cut(s)	163, 218
HincII	GTYRAC	1 cut(s)	473
HindII	GTYRAC	1 cut(s)	473
HindIII	AAGCTT	1 cut(s)	1134
HinfI	GANTC	4 cut(s)	505, 692, 958, 1172
HpaII	CCGG	3 cut(s)	294, 308, 868
HphI	GGTGA	1 cut(s)	992
Hpy166II	GTNNAC	4 cut(s)	473, 541, 809, 1050
Hpy188I	TCNGA	2 cut(s)	411, 504
Hpy188III	TCNNGA	8 cut(s)	24, 379, 509, 574, 728, 779, 868, 1262
Hpy8I	GTNNAC	4 cut(s)	473, 541, 809, 1050
Hpy99I	CGWCG	6 cut(s)	14, 17, 41, 65, 239, 329
HpyAV	CCTTC	2 cut(s)	241, 361
HpyCH4III	ACNGT	2 cut(s)	343, 652
HpyCH4IV	ACGT	2 cut(s)	324, 524
HpyF10VI	GCNNNNNNNGC	5 cut(s)	141, 217, 680, 1026, 1202
HpyF3I	CTNAG	2 cut(s)	1283, 1316
HpySE526I	ACGT	2 cut(s)	324, 524
Hsp92I	GRCGYC	2 cut(s)	60, 324
HspAI	GCGC	2 cut(s)	163, 218
Kpn2I	TCCGGA	1 cut(s)	867
Ksp22I	TGATCA	3 cut(s)	411, 997, 1140
LmnI	GCTCC	8 cut(s)	84, 186, 208, 225, 778, 832, 901, 1284
Lsp1109I	GCAGC	4 cut(s)	114, 658, 700, 963
LweI	GCATC	4 cut(s)	472, 579, 622, 1331
MaeI	CTAG	1 cut(s)	1164
MaeII	ACGT	2 cut(s)	324, 524
MaeIII	GTNAC	3 cut(s)	434, 595, 646
MboII	GAAGA	2 cut(s)	298, 376
MflI	RGATCY	2 cut(s)	45, 1023
MhlI	GDGCHC	3 cut(s)	390, 811, 1311
MlsI	TGGCCA	2 cut(s)	1020, 1088
MluCI	AATT	7 cut(s)	240, 584, 743, 862, 871, 970, 1167
MluNI	TGGCCA	2 cut(s)	1020, 1088
MlyI	GAGTC	2 cut(s)	499, 1166
Mox20I	TGGCCA	2 cut(s)	1020, 1088
MroI	TCCGGA	1 cut(s)	867
MscI	TGGCCA	2 cut(s)	1020, 1088
MseI	TTAA	4 cut(s)	243, 489, 837, 1269
MslI	CAYNNNNRTG	5 cut(s)	428, 548, 575, 759, 993
Msp20I	TGGCCA	2 cut(s)	1020, 1088
MspA1I	CMGCKG	1 cut(s)	144
MspCI	CTTAAG	1 cut(s)	836
MspI	CCGG	3 cut(s)	294, 308, 868
MspR9I	CCNGG	2 cut(s)	944, 1160
Mva1269I	GAATGC	1 cut(s)	1222
MvaI	CCWGG	2 cut(s)	944, 1160
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	5 cut(s)	141, 217, 680, 1026, 1202
NdeI	CATATG	1 cut(s)	793
NlaIV	GGNNCC	4 cut(s)	27, 86, 188, 306
NmeAIII	GCCGAG	1 cut(s)	382
NmuCI	GTSAC	2 cut(s)	595, 646
NotI	GCGGCCGC	1 cut(s)	145
NspI	RCATGY	2 cut(s)	547, 1205
PaeR7I	CTCGAG	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	125
PciI	ACATGT	1 cut(s)	543
PcsI	WCGNNNNNNNCGW	3 cut(s)	57, 321, 333
PctI	GAATGC	1 cut(s)	1222
PfeI	GAWTC	2 cut(s)	692, 958
PflFI	GACNNNGTC	1 cut(s)	644
PkrI	GCNGC	6 cut(s)	104, 146, 149, 673, 715, 978
PleI	GAGTC	2 cut(s)	499, 1166
PpsI	GAGTC	2 cut(s)	499, 1166
PscI	ACATGT	1 cut(s)	543
PsiI	TTATAA	1 cut(s)	1298
Psp124BI	GAGCTC	1 cut(s)	390
Psp6I	CCWGG	2 cut(s)	942, 1158
PspGI	CCWGG	2 cut(s)	942, 1158
PspN4I	GGNNCC	4 cut(s)	27, 86, 188, 306
PspPI	GGNCC	4 cut(s)	26, 305, 354, 737
PsuI	RGATCY	2 cut(s)	45, 1023
PsyI	GACNNNGTC	1 cut(s)	644
RsaI	GTAC	2 cut(s)	314, 888
RsaNI	GTAC	2 cut(s)	313, 887
RseI	CAYNNNNRTG	5 cut(s)	428, 548, 575, 759, 993
SacI	GAGCTC	1 cut(s)	390
SaqAI	TTAA	4 cut(s)	243, 489, 837, 1269
SatI	GCNGC	6 cut(s)	103, 145, 148, 672, 714, 977
Sau96I	GGNCC	4 cut(s)	26, 305, 354, 737
SchI	GAGTC	2 cut(s)	499, 1166
ScrFI	CCNGG	2 cut(s)	944, 1160
SduI	GDGCHC	3 cut(s)	390, 811, 1311
SfaNI	GCATC	4 cut(s)	472, 579, 622, 1331
SfcI	CTRYAG	3 cut(s)	139, 397, 1238
Sfr274I	CTCGAG	1 cut(s)	377
SinI	GGWCC	1 cut(s)	26
SlaI	CTCGAG	1 cut(s)	377
SmiMI	CAYNNNNRTG	5 cut(s)	428, 548, 575, 759, 993
SmlI	CTYRAG	6 cut(s)	377, 777, 836, 922, 1004, 1118
SmoI	CTYRAG	6 cut(s)	377, 777, 836, 922, 1004, 1118
Sse9I	AATT	7 cut(s)	240, 584, 743, 862, 871, 970, 1167
SseBI	AGGCCT	1 cut(s)	125
SsiI	CCGC	5 cut(s)	82, 144, 148, 223, 1027
SspMI	CTAG	1 cut(s)	1164
SstI	GAGCTC	1 cut(s)	390
StuI	AGGCCT	1 cut(s)	125
StyD4I	CCNGG	2 cut(s)	942, 1158
StyI	CCWWGG	1 cut(s)	952
TaaI	ACNGT	2 cut(s)	343, 652
TaiI	ACGT	2 cut(s)	327, 527
TaqI	TCGA	7 cut(s)	36, 63, 114, 120, 298, 378, 573
TasI	AATT	7 cut(s)	240, 584, 743, 862, 871, 970, 1167
TauI	GCSGC	2 cut(s)	147, 150
TfiI	GAWTC	2 cut(s)	692, 958
Tru1I	TTAA	4 cut(s)	243, 489, 837, 1269
Tru9I	TTAA	4 cut(s)	243, 489, 837, 1269
TscAI	CASTG	3 cut(s)	346, 655, 1150
TseFI	GTSAC	2 cut(s)	595, 646
TseI	GCWGC	4 cut(s)	102, 671, 713, 976
Tsp45I	GTSAC	2 cut(s)	595, 646
TspDTI	ATGAA	3 cut(s)	163, 777, 927
TspGWI	ACGGA	1 cut(s)	330
TspRI	CASTG	3 cut(s)	346, 655, 1150
Tth111I	GACNNNGTC	1 cut(s)	644
Vha464I	CTTAAG	1 cut(s)	836
VneI	GTGCAC	1 cut(s)	807
VpaK11BI	GGWCC	1 cut(s)	26
XagI	CCTNNNNNAGG	1 cut(s)	744
XapI	RAATTY	3 cut(s)	862, 871, 970
XceI	RCATGY	2 cut(s)	547, 1205
XhoI	CTCGAG	1 cut(s)	377
XmiI	GTMKAC	1 cut(s)	1049
XspI	CTAG	1 cut(s)	1164
ZraI	GACGTC	1 cut(s)	325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.