Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0008481

Physical Location & Seq

Genomic Coordinates Forward (+)

21508812 .. 21525007

Gene Structure 16196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1103100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3195 bp

ATGGGACTTTTTGATGGATTGCCCGTGTCTTCAGACAAGGCATATCTGAGGGAAGAGATTGCAAAGATAGATGAGAGCTGGGCTGCTGCTCGTTTTGATTCATTACCTCATGTTGTTCATATTTTGACATCCAAAGATCGTGAAGGTGACATCCAGGTTTTGAAGGAGCAAAGTGATGTTGTTGAGGAGGTTGTGGATGAAGTTGTGCATAATTATCACAGTGGCTTCAACAAAGCTATTCAAAATTATTCTCAGATCTTGCGGTTGTTCAGCGAATCTACTGAAAGTGTTGGTGTCCTAAAGGTTGATTTGGCTGAAGCAAAGAAGCATCTCAGTGCCCGTAGTAAACAACTGCATCAGTTATGGTACCGGTCAGTTACTTTGCGTCACATAATATCCCTCTTAGATCAAATTGAGGGCATATCTAAGGTTCCAGCTCGGATTGAGAAGCTGATTGCTGAAAAGCAGTATTATGCTGCTGTTCAGTTTCATGTTCAATCAATGTTGATGCTTGAAAGAGAGGGGCTTCAAACGGTCGGTGCCCTTCAAGATGTTCGCTCTGAGTTGACAAAGTTGCGAGGAGTTCTGTTTCATAAAGTGCTAGAGGATTTGCATGCTCATCTTTACAACAAGGGTGAATATAGCTCAGCTGCTTTAAGTTTGCAAGAAATGGATGATGAGGTACCAACCACCACTGCTGCTGTATTGACTGATTCACAATCCCTGTCTCGAAGAACCAGGCTGTTAAAAGGTGACAATCAGTTCGGTATTCAAGGAGATGGATCATATAGGACAGGTTCTATTGATGGAGGTTCATCTTTTGATGGAGTTGCTGAGGAGGGCACTTTGGAACTGCATGAGGAAGCTACCTCAGATGGGCAGACATCAGTGAGGGTCAATGGTGATGTCAAAATTGTTCCTCGTGAGATGCCAACATGGCTTCAGTATTCCACTCCGGACGAATTTCTTGAAGCAATAAAGAAAAGTGATGCCCCACTTCATGTCAAGTATTTGCAGACTATGGTTGAGTGCCTTTGCATGCTTAGGAAAGTTGCAGCTGCTGGTGCTATAATATGCCAAAGATTGCGACCTACAATTCATGAGATCATCACATCCAAGATTAAAGCTCATGCTGAACTTGCTAATTCTTCAAGGTCTAGCATTGGGCAAGCTTCCCGCACAACAGCTGGTCTACATTTCATGAAGGGACAGTTACAAAGTTATCAGTTGCCAAAACAGAAGCGTCAGAATGGGATATCACTGTCTGGAACTCTATTGGCAGTAAGCCCAGTCTCATCTGTAATGGCTCCTGCAGGGAAAGCACAAGCCGTGGCAAAAGAACTTCTTGATTCAATTTTGGATGCTGTTGTTCGGATATTTGAGAACCATGTTGTTGTTGGGGAGCTTTTGGAATCAAAGTCCTCTGTTCAAATAGACATGAACACACCAAAATCAATGCCAACAGATGTAAATTGGAATACTGATTTGGAAGCATCTCAAGTTACTGGAGGCTATAGCATTGGTTTTTCCTTGACAGTATTACAGAGTGAATGCCAACAACTTATTTGTGAGATTCTGCGGGCAACTCCTGAAGCTGCATCTGCTGATGCTGCTGTACAAACAGCTAGACTTGCAAACAAGGTCCCTTCCAAAGACAAGAGGGATGATGCAGAAGGGGGTCTTACCTTTGCTTTTCGCTTCACAGATGCTGCTATTTCTGTTCCCAACCAAGGGGTTGATCTCATTCGTCAAGGCTGGAGTAGGAAAGGTCCAAATGTTTCACAAGAAGGTTATGGGTCCGCAGCTATCTTGCCTGAGCAAGGCATATATCTTGCAGCATCTGTATACCGGCCTGTTATTCAGTTTACAGATAAGGTCGCATCAATGCTTCCGAAAAAGTATTCCCAGCTGGGTAACGATGGATTGCTGGCTTTTGTGGAGAACTTTGTGAAGGACCATTTTCTACCCACGATGTTTGTGGACTACAGAAAAGGAGTACAGCAAGCTATATCAAGTCCAGCTGCATTCCGGCCCAGGGCACATGCTGCTGCATCTTATACTCCTTCAGTTGAGAAGGGTCGACCTGTCTTACAGGGACTGTTGGCAATAGATTTTTTAGCAAAAGAGGTGCTGGGTTGGGCACAAGCTATGCCTAAATTTGCCATAGACCTTGTGAAATATGTGCAAACTTTCCTTGAGCGAACCTATGAACGATGCCGGACCTCATACATGGAGGCGGTTCTGGAGAAACAGAGCTATATGCTCATTGGAAGGTATGATATTGAGCAATTGATGCGTCTCGATCCAGCAAGTACATGTTTACCAATTTCCTTTGGTCAGTCAAACATTGAAACCCATGCTTCAGATTCTGAAAATCTTGAGGTTGAATTACAATTAAGCGACCTATTATTGAATTTGCGGCCTATTAAGCAGGATAATCTAATTCGTGATGATAACAAACTAATATTGCTGGCTTCCCTTAGTGATTCGTTGGAGTATGTTGCGGACTCTATTGAAAGGCTTGGGCAGACAACCTTCAGGTCTCCAAATGAAGTAGAAGAGAGTGGTATGAACCATCATCAACGAACAACTAGTGCTGCTTCTAGGGATCTGGCATCGTTTGCAGATGAGTATAGAAAATTGGCAATTGACTGCCTCAAGGTTTTACGTGTTGAGATGCAATTGGAGACGATTTTCCATATGCAGGAAATGACAAATAGGGAATACATGGAAGACCAGGATGCAGAAGAACCAGATGATTTCATTATTTCACTTACTGCACAGATAACACGCAGGGATGAGGAAATGGCACCTTTTGTTGTGGGAACGAAGCGAAACTACATATTTGGTGGGATTTGTAGCATCGCTGCAAATGCATCCATCAAGGCTTTGGCTGATATGAAATCCATCAACCTTTTTGGCGTTCAGCAGATATGTCGGAATTCAATCGCCCTGGAACAGGCCCTGGCTGCTATCCCATCAATTAACAGTGAAGGTGTCCAACAACGACTAGATCATGTCCGAACTTACTATGAACTCCTAAACATGCCATTCGAGGCCTTGCTAGCTTTCATCACAGAGCACGAGCACTTGTTCACGACTACAGAGTATGCAAATCTTCTGAAGGTCCAGGTTCCAGGAAGGGAGATTCCTGCCGATGCTCAAGATCGTGTATCAGAGATTTTATCCCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0003006 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0006605 GO:0006612 GO:0006810 GO:0006886 GO:0006887 GO:0006892 GO:0006893 GO:0006903 GO:0007154 GO:0007275 GO:0008037 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009506 GO:0009791 GO:0009856 GO:0009875 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0022414 GO:0030054 GO:0031982 GO:0032501 GO:0032502 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043230 GO:0044237 GO:0044249 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0045184 GO:0046903 GO:0046907 GO:0048193 GO:0048316 GO:0048354 GO:0048359 GO:0048544 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051704 GO:0055044 GO:0060321 GO:0061458 GO:0070062 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072657 GO:0090150 GO:0098876 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec8_exocyst

Protein Analysis

1065

Amino Acids

118.28

Weight (kDa)

5.44

Isoelectric Point (pI)

47.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec8_N	PF04048	16 - 151	1e-36	Exocyst complex component Sec8 N-terminal
Vps54_N	PF10475	23 - 205	5.8e-08	Vacuolar-sorting protein 54, of GARP complex
EXOC6_Sec15_N	PF20651	60 - 215	8.8e-08	Exocyst complex component EXOC6/Sec15, N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10380 AT3G10380
fragaria_vesca	FvH4_7g18760 FvH4_7g18760
malus_domestica	MD01G1103100.v1.1 MD07G1169800.v1.1
prunus_persica	Prupe.2G208700_v2.0.a1 Prupe.2G208700_v2.0.a1
pyrus_communis	pycom01g12960 pycom07g16370
rosa_chinensis	RchiOBHm_Chr1g0362571
rosa_laevigata	RLG00000027638
rosa_multiflora	Rmu_sc0005725.1_g000007
rosa_roxburghii	Rroxscaffold_4G00293960
rosa_rugosa	Rorug01G0299600 Rorug01G0299600 Rorug01G0299600 Rorug01G0299700
rosa_samantha	Rh1AG308300 Rh1BG271600 Rh1CG289200 Rh1DG301900
rosa_wichuraiana	Rw1G027370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	366, 682
AccB1I	GGYRCC	4 cut(s)	366, 539, 682, 2809
AccI	GTMKAC	3 cut(s)	1192, 1845, 2080
AccIII	TCCGGA	1 cut(s)	955
AciI	CCGC	7 cut(s)	262, 1177, 1579, 1800, 2237, 2419, 2504
AclWI	GGATC	3 cut(s)	790, 2297, 2616
AcsI	RAATTY	4 cut(s)	962, 2156, 2413, 2941
AcuI	CTGAAG	8 cut(s)	15, 336, 926, 1611, 2049, 2346, 2521, 3143
AfaI	GTAC	5 cut(s)	368, 684, 1617, 1998, 2314
AfiI	CCNNNNNNNGG	7 cut(s)	876, 1730, 1731, 1820, 2035, 2704, 2959
AflIII	ACRYGT	2 cut(s)	2315, 2668
AgeI	ACCGGT	1 cut(s)	369
AhlI	ACTAGT	1 cut(s)	2591
AjnI	CCWGG	8 cut(s)	153, 737, 2033, 2736, 2952, 2964, 3129, 3136
AjuI	GAANNNNNNNTTGG	2 cut(s)	1469, 1501
Alw21I	GWGCWC	2 cut(s)	3084, 3090
Alw26I	GTCTC	5 cut(s)	732, 1297, 2303, 2547, 2681
AlwI	GGATC	3 cut(s)	790, 2297, 2616
AlwNI	CAGNNNCTG	6 cut(s)	1061, 1709, 1841, 2098, 2369, 2965
Aor13HI	TCCGGA	1 cut(s)	955
AoxI	GGCC	5 cut(s)	1850, 2030, 2420, 2961, 3057
ApoI	RAATTY	4 cut(s)	962, 2156, 2413, 2941
ArsI	GACNNNNNNTTYG	2 cut(s)	746, 778
AsiGI	ACCGGT	1 cut(s)	369
Asp718I	GGTACC	2 cut(s)	366, 682
AspS9I	GGNCC	8 cut(s)	1642, 1769, 1797, 1954, 2031, 2220, 2962, 3127
AsuHPI	GGTGA	4 cut(s)	158, 647, 764, 914
AsuNHI	GCTAGC	1 cut(s)	3064
AvaII	GGWCC	6 cut(s)	1642, 1769, 1797, 1954, 2220, 3127
BaeGI	GKGCMC	5 cut(s)	340, 544, 845, 2041, 2143
BanI	GGYRCC	4 cut(s)	366, 539, 682, 2809
BarI	GAAGNNNNNNTAC	2 cut(s)	2822, 2854
BauI	CACGAG	2 cut(s)	921, 3083
BbsI	GAAGAC	2 cut(s)	21, 2739
Bbv12I	GWGCWC	2 cut(s)	3084, 3090
BbvCI	CCTCAGC	1 cut(s)	834
BceAI	ACGGC	1 cut(s)	1313
BcgI	CGANNNNNNTGC	2 cut(s)	2918, 2952
BciT130I	CCWGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
BcoDI	GTCTC	5 cut(s)	732, 1297, 2303, 2547, 2681
BcuI	ACTAGT	1 cut(s)	2591
BfaI	CTAG	7 cut(s)	602, 1158, 1626, 2592, 2604, 3011, 3065
BfmI	CTRYAG	4 cut(s)	1311, 1513, 1984, 3102
BglI	GCCNNNNNGGC	1 cut(s)	937
BglII	AGATCT	1 cut(s)	255
BlpI	GCTNAGC	1 cut(s)	646
Bme1390I	CCNGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
Bme18I	GGWCC	6 cut(s)	1642, 1769, 1797, 1954, 2220, 3127
BmgT120I	GGNCC	8 cut(s)	1642, 1769, 1797, 1954, 2031, 2220, 2962, 3127
BmiI	GGNNCC	9 cut(s)	368, 432, 541, 684, 1308, 1644, 1798, 2811, 3135
BmrFI	CCNGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
BmrI	ACTGGG	1 cut(s)	1283
BmtI	GCTAGC	1 cut(s)	3068
BmuI	ACTGGG	1 cut(s)	1283
BpiI	GAAGAC	2 cut(s)	21, 2739
BpmI	CTGGAG	3 cut(s)	1527, 1777, 2264
Bpu10I	CCTNAGC	3 cut(s)	834, 1043, 1815
Bpu1102I	GCTNAGC	1 cut(s)	646
BpuEI	CTTGAG	5 cut(s)	1482, 2216, 2399, 2642, 3147
BsaAI	YACGTR	1 cut(s)	2669
BsaI	GGTCTC	1 cut(s)	2547
BsaJI	CCNNGG	6 cut(s)	1329, 1729, 2033, 2034, 2952, 2964
BsaWI	WCCGGW	2 cut(s)	369, 955
Bsc4I	CCNNNNNNNGG	7 cut(s)	876, 1730, 1731, 1820, 2035, 2704, 2959
Bse118I	RCCGGY	2 cut(s)	369, 1848
Bse1I	ACTGG	2 cut(s)	1289, 1510
BseAI	TCCGGA	1 cut(s)	955
BseBI	CCWGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
BseDI	CCNNGG	6 cut(s)	1329, 1729, 2033, 2034, 2952, 2964
BseLI	CCNNNNNNNGG	7 cut(s)	876, 1730, 1731, 1820, 2035, 2704, 2959
BseMII	CTCAG	8 cut(s)	38, 266, 346, 552, 660, 825, 885, 1806
BseNI	ACTGG	2 cut(s)	1289, 1510
BseRI	GAGGAG	3 cut(s)	200, 594, 851
BseSI	GKGCMC	5 cut(s)	340, 544, 845, 2041, 2143
BseYI	CCCAGC	4 cut(s)	78, 1905, 1909, 2131
BsgI	GTGCAG	1 cut(s)	2763
Bsh1285I	CGRYCG	1 cut(s)	537
BshFI	GGCC	5 cut(s)	1852, 2032, 2422, 2963, 3059
BshNI	GGYRCC	4 cut(s)	366, 539, 682, 2809
BshTI	ACCGGT	1 cut(s)	369
BsiEI	CGRYCG	1 cut(s)	537
BsiHKAI	GWGCWC	2 cut(s)	3084, 3090
BsiSI	CCGG	5 cut(s)	370, 956, 1849, 2029, 2218
BslFI	GGGAC	4 cut(s)	18, 1221, 1628, 2109
BslI	CCNNNNNNNGG	7 cut(s)	876, 1730, 1731, 1820, 2035, 2704, 2959
BsmAI	GTCTC	5 cut(s)	732, 1297, 2303, 2547, 2681
BsmBI	CGTCTC	2 cut(s)	2303, 2681
BsmFI	GGGAC	4 cut(s)	18, 1221, 1628, 2109
BsmI	GAATGC	2 cut(s)	1556, 2024
BsnI	GGCC	5 cut(s)	1852, 2032, 2422, 2963, 3059
Bso31I	GGTCTC	1 cut(s)	2547
Bsp1286I	GDGCHC	7 cut(s)	340, 544, 845, 2041, 2143, 3084, 3090
Bsp13I	TCCGGA	1 cut(s)	955
Bsp1407I	TGTACA	1 cut(s)	1615
Bsp1720I	GCTNAGC	1 cut(s)	646
BspACI	CCGC	7 cut(s)	262, 1177, 1579, 1800, 2237, 2419, 2504
BspANI	GGCC	5 cut(s)	1852, 2032, 2422, 2963, 3059
BspCNI	CTCAG	8 cut(s)	39, 265, 345, 553, 659, 826, 884, 1807
BspEI	TCCGGA	1 cut(s)	955
BspHI	TCATGA	2 cut(s)	1099, 1200
BspLI	GGNNCC	9 cut(s)	368, 432, 541, 684, 1308, 1644, 1798, 2811, 3135
BspMAI	CTGCAG	1 cut(s)	1315
BspOI	GCTAGC	1 cut(s)	3068
BspPI	GGATC	3 cut(s)	790, 2297, 2616
BspT107I	GGYRCC	4 cut(s)	366, 539, 682, 2809
BspTNI	GGTCTC	1 cut(s)	2547
BsrFI	RCCGGY	2 cut(s)	369, 1848
BsrGI	TGTACA	1 cut(s)	1615
BsrI	ACTGG	2 cut(s)	1289, 1510
BssAI	RCCGGY	2 cut(s)	369, 1848
BssECI	CCNNGG	6 cut(s)	1329, 1729, 2033, 2034, 2952, 2964
BssNAI	GTATAC	1 cut(s)	1846
BssSI	CACGAG	2 cut(s)	921, 3083
BssT1I	CCWWGG	1 cut(s)	1729
Bst1107I	GTATAC	1 cut(s)	1846
Bst2BI	CACGAG	2 cut(s)	921, 3083
Bst2UI	CCWGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
Bst4CI	ACNGT	7 cut(s)	221, 535, 1212, 1263, 1537, 2100, 2990
Bst6I	CTCTTC	2 cut(s)	48, 2553
BstAPI	GCANNNNNTGC	3 cut(s)	2045, 2293, 2621
BstAUI	TGTACA	1 cut(s)	1615
BstBAI	YACGTR	1 cut(s)	2669
BstC8I	GCNNGC	8 cut(s)	615, 1040, 1170, 1581, 1929, 2004, 2472, 3066
BstDSI	CCRYGG	1 cut(s)	1329
BstENI	CCTNNNNNAGG	2 cut(s)	1818, 2957
BstMAI	GTCTC	5 cut(s)	732, 1297, 2303, 2547, 2681
BstMCI	CGRYCG	1 cut(s)	537
BstNI	CCWGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
BstNSI	RCATGY	5 cut(s)	617, 1042, 2045, 2319, 3049
BstSCI	CCNGG	8 cut(s)	153, 737, 2033, 2736, 2952, 2964, 3129, 3136
BstSFI	CTRYAG	4 cut(s)	1311, 1513, 1984, 3102
BstSLI	GKGCMC	5 cut(s)	340, 544, 845, 2041, 2143
BstV2I	GAAGAC	2 cut(s)	21, 2739
BstX2I	RGATCY	2 cut(s)	255, 2608
BstYI	RGATCY	2 cut(s)	255, 2608
BstZ17I	GTATAC	1 cut(s)	1846
BsuRI	GGCC	5 cut(s)	1852, 2032, 2422, 2963, 3059
BtgI	CCRYGG	1 cut(s)	1329
BtgZI	GCGATG	1 cut(s)	2848
BtsI	GCAGTG	1 cut(s)	693
BtsIMutI	CAGTG	6 cut(s)	226, 340, 693, 894, 1259, 2995
Cac8I	GCNNGC	8 cut(s)	615, 1040, 1170, 1581, 1929, 2004, 2472, 3066
CaiI	CAGNNNCTG	6 cut(s)	1061, 1709, 1841, 2098, 2369, 2965
CciI	TCATGA	2 cut(s)	1099, 1200
Cfr10I	RCCGGY	2 cut(s)	369, 1848
Cfr13I	GGNCC	8 cut(s)	1642, 1769, 1797, 1954, 2031, 2220, 2962, 3127
CseI	GACGC	3 cut(s)	374, 1232, 2285
Csp6I	GTAC	5 cut(s)	367, 683, 1616, 1997, 2313
CspAI	ACCGGT	1 cut(s)	369
CspCI	CAANNNNNGTGG	2 cut(s)	1957, 1992
CviQI	GTAC	5 cut(s)	367, 683, 1616, 1997, 2313
Eam1104I	CTCTTC	2 cut(s)	48, 2553
EarI	CTCTTC	2 cut(s)	48, 2553
Eco130I	CCWWGG	1 cut(s)	1729
Eco147I	AGGCCT	1 cut(s)	3059
Eco31I	GGTCTC	1 cut(s)	2547
Eco32I	GATATC	1 cut(s)	1257
Eco47I	GGWCC	6 cut(s)	1642, 1769, 1797, 1954, 2220, 3127
Eco57I	CTGAAG	8 cut(s)	15, 336, 926, 1611, 2049, 2346, 2521, 3143
EcoNI	CCTNNNNNAGG	2 cut(s)	1818, 2957
EcoO109I	RGGNCCY	2 cut(s)	1642, 2962
EcoRI	GAATTC	1 cut(s)	2941
EcoRII	CCWGG	8 cut(s)	153, 737, 2033, 2736, 2952, 2964, 3129, 3136
EcoRV	GATATC	1 cut(s)	1257
EcoT14I	CCWWGG	1 cut(s)	1729
EcoT22I	ATGCAT	1 cut(s)	2878
ErhI	CCWWGG	1 cut(s)	1729
Esp3I	CGTCTC	2 cut(s)	2303, 2681
FalI	AAGNNNNNCTT	4 cut(s)	1329, 1361, 1665, 1697
FaqI	GGGAC	4 cut(s)	18, 1221, 1628, 2109
FauI	CCCGC	2 cut(s)	1184, 1572
FauNDI	CATATG	1 cut(s)	2700
FblI	GTMKAC	3 cut(s)	1192, 1845, 2080
FspBI	CTAG	7 cut(s)	602, 1158, 1626, 2592, 2604, 3011, 3065
GsaI	CCCAGC	4 cut(s)	82, 1909, 1913, 2135
GsuI	CTGGAG	3 cut(s)	1527, 1777, 2264
HaeIII	GGCC	5 cut(s)	1852, 2032, 2422, 2963, 3059
HapII	CCGG	5 cut(s)	370, 956, 1849, 2029, 2218
HgaI	GACGC	3 cut(s)	374, 1232, 2285
HincII	GTYRAC	2 cut(s)	567, 2081
HindII	GTYRAC	2 cut(s)	567, 2081
HindIII	AAGCTT	1 cut(s)	1170
HpaII	CCGG	5 cut(s)	370, 956, 1849, 2029, 2218
HphI	GGTGA	4 cut(s)	158, 647, 764, 914
Hpy166II	GTNNAC	9 cut(s)	347, 567, 1193, 1846, 1866, 1981, 2081, 2321, 3096
Hpy8I	GTNNAC	9 cut(s)	347, 567, 1193, 1846, 1866, 1981, 2081, 2321, 3096
HpyCH4III	ACNGT	7 cut(s)	221, 535, 1212, 1263, 1537, 2100, 2990
HpyCH4IV	ACGT	1 cut(s)	2668
HpySE526I	ACGT	1 cut(s)	2668
Kpn2I	TCCGGA	1 cut(s)	955
KpnI	GGTACC	2 cut(s)	370, 686
LmnI	GCTCC	3 cut(s)	166, 1312, 1402
MaeI	CTAG	7 cut(s)	602, 1158, 1626, 2592, 2604, 3011, 3065
MaeII	ACGT	1 cut(s)	2668
MaeIII	GTNAC	7 cut(s)	146, 376, 386, 752, 1212, 1501, 1913
MboII	GAAGA	8 cut(s)	21, 65, 744, 1140, 2570, 2744, 2759, 3110
MfeI	CAATTG	3 cut(s)	2288, 2646, 2681
MflI	RGATCY	2 cut(s)	255, 2608
MhlI	GDGCHC	7 cut(s)	340, 544, 845, 2041, 2143, 3084, 3090
MlyI	GAGTC	1 cut(s)	2501
MmeI	TCCRAC	3 cut(s)	2472, 2918, 3025
Mph1103I	ATGCAT	1 cut(s)	2878
MroI	TCCGGA	1 cut(s)	955
MseI	TTAA	6 cut(s)	656, 746, 1122, 2396, 2427, 2985
MslI	CAYNNNNRTG	1 cut(s)	333
MspA1I	CMGCKG	5 cut(s)	650, 1058, 1187, 1909, 2021
MspI	CCGG	5 cut(s)	370, 956, 1849, 2029, 2218
MspR9I	CCNGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
MunI	CAATTG	3 cut(s)	2288, 2646, 2681
Mva1269I	GAATGC	2 cut(s)	1556, 2024
MvaI	CCWGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
NdeI	CATATG	1 cut(s)	2700
NheI	GCTAGC	1 cut(s)	3064
NlaIV	GGNNCC	9 cut(s)	368, 432, 541, 684, 1308, 1644, 1798, 2811, 3135
NmuCI	GTSAC	3 cut(s)	146, 386, 752
NsiI	ATGCAT	1 cut(s)	2878
NspI	RCATGY	5 cut(s)	617, 1042, 2045, 2319, 3049
PaeI	GCATGC	2 cut(s)	617, 1042
PagI	TCATGA	2 cut(s)	1099, 1200
PasI	CCCWGGG	1 cut(s)	2034
PceI	AGGCCT	1 cut(s)	3059
PciI	ACATGT	1 cut(s)	2315
PctI	GAATGC	2 cut(s)	1556, 2024
PfeI	GAWTC	9 cut(s)	98, 275, 713, 1349, 1412, 1573, 2366, 2486, 3148
PfoI	TCCNGGA	1 cut(s)	3136
PinAI	ACCGGT	1 cut(s)	369
PleI	GAGTC	1 cut(s)	2501
PpsI	GAGTC	1 cut(s)	2501
Ppu21I	YACGTR	1 cut(s)	2669
PpuMI	RGGWCCY	1 cut(s)	1642
PscI	ACATGT	1 cut(s)	2315
Psp5II	RGGWCCY	1 cut(s)	1642
Psp6I	CCWGG	8 cut(s)	153, 737, 2033, 2736, 2952, 2964, 3129, 3136
PspFI	CCCAGC	4 cut(s)	78, 1905, 1909, 2131
PspGI	CCWGG	8 cut(s)	153, 737, 2033, 2736, 2952, 2964, 3129, 3136
PspN4I	GGNNCC	9 cut(s)	368, 432, 541, 684, 1308, 1644, 1798, 2811, 3135
PspPI	GGNCC	8 cut(s)	1642, 1769, 1797, 1954, 2031, 2220, 2962, 3127
PspPPI	RGGWCCY	1 cut(s)	1642
PstI	CTGCAG	1 cut(s)	1315
PstNI	CAGNNNCTG	6 cut(s)	1061, 1709, 1841, 2098, 2369, 2965
PsuI	RGATCY	2 cut(s)	255, 2608
PvuII	CAGCTG	5 cut(s)	650, 1058, 1187, 1909, 2021
RsaI	GTAC	5 cut(s)	368, 684, 1617, 1998, 2314
RsaNI	GTAC	5 cut(s)	367, 683, 1616, 1997, 2313
RseI	CAYNNNNRTG	1 cut(s)	333
SalI	GTCGAC	1 cut(s)	2079
SaqAI	TTAA	6 cut(s)	656, 746, 1122, 2396, 2427, 2985
Sau96I	GGNCC	8 cut(s)	1642, 1769, 1797, 1954, 2031, 2220, 2962, 3127
SbfI	CCTGCAGG	1 cut(s)	1315
SchI	GAGTC	1 cut(s)	2501
ScrFI	CCNGG	8 cut(s)	155, 739, 2035, 2738, 2954, 2966, 3131, 3138
SdaI	CCTGCAGG	1 cut(s)	1315
SduI	GDGCHC	7 cut(s)	340, 544, 845, 2041, 2143, 3084, 3090
SfcI	CTRYAG	4 cut(s)	1311, 1513, 1984, 3102
SinI	GGWCC	6 cut(s)	1642, 1769, 1797, 1954, 2220, 3127
SmiMI	CAYNNNNRTG	1 cut(s)	333
SmlI	CTYRAG	5 cut(s)	1497, 2195, 2378, 2657, 3162
SmoI	CTYRAG	5 cut(s)	1497, 2195, 2378, 2657, 3162
SpeI	ACTAGT	1 cut(s)	2591
SphI	GCATGC	2 cut(s)	617, 1042
Sse8387I	CCTGCAGG	1 cut(s)	1315
SseBI	AGGCCT	1 cut(s)	3059
SsiI	CCGC	7 cut(s)	262, 1177, 1579, 1800, 2237, 2419, 2504
SspI	AATATT	1 cut(s)	2466
SspMI	CTAG	7 cut(s)	602, 1158, 1626, 2592, 2604, 3011, 3065
StuI	AGGCCT	1 cut(s)	3059
StyD4I	CCNGG	8 cut(s)	153, 737, 2033, 2736, 2952, 2964, 3129, 3136
StyI	CCWWGG	1 cut(s)	1729
TaaI	ACNGT	7 cut(s)	221, 535, 1212, 1263, 1537, 2100, 2990
TaiI	ACGT	1 cut(s)	2671
TaqI	TCGA	4 cut(s)	730, 2080, 2301, 3054
TatI	WGTACW	3 cut(s)	1615, 1996, 2312
TauI	GCSGC	1 cut(s)	2422
TfiI	GAWTC	9 cut(s)	98, 275, 713, 1349, 1412, 1573, 2366, 2486, 3148
Tru1I	TTAA	6 cut(s)	656, 746, 1122, 2396, 2427, 2985
Tru9I	TTAA	6 cut(s)	656, 746, 1122, 2396, 2427, 2985
TscAI	CASTG	6 cut(s)	226, 340, 700, 894, 1266, 2995
TseFI	GTSAC	3 cut(s)	146, 386, 752
Tsp45I	GTSAC	3 cut(s)	146, 386, 752
TspRI	CASTG	6 cut(s)	226, 340, 700, 894, 1266, 2995
VpaK11BI	GGWCC	6 cut(s)	1642, 1769, 1797, 1954, 2220, 3127
XagI	CCTNNNNNAGG	2 cut(s)	1818, 2957
XapI	RAATTY	4 cut(s)	962, 2156, 2413, 2941
XceI	RCATGY	5 cut(s)	617, 1042, 2045, 2319, 3049
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1394, 1975, 2887
XmiI	GTMKAC	3 cut(s)	1192, 1845, 2080
XspI	CTAG	7 cut(s)	602, 1158, 1626, 2592, 2604, 3011, 3065
Zsp2I	ATGCAT	1 cut(s)	2878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.