Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0008481

Physical Location & Seq

Genomic Coordinates Reverse (-)

13410608 .. 13426498

Gene Structure 15891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027638

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3204 bp

ATGGGAATTTTTGATGGATTGCCTGTGTCTCGAGACAAGGAATATCTGAGGGAAGAGATTTCAAGAATAGATGAGAGCTGGGCTGCAGCTCGTTTTGATTCATTACCTCATGTTGTTCATATTTTGACATCCAAAGACCGTGAAAGTGAAGTCGAGTTTCTGAAGCAGCAAAGTGATGTTGTTGAGGAGGTTGTGGATGAAGTTGTACACAATTATCACAGTGGCTTCAACAAAGCAATTCAAAATTATTCCCAGATCTTGCGATTGTTCAGCGAATCTACCGAAAATATTGGTGTCTTAAAGGTTGATTTGGCTGAAGCAAAAAGGCGTCTTAGTTCCCGCAATAAACAACTGCATCAGTTATGGTACCGGTCGGTGACATTGCGCCACATAATCTCCCTATTAGATCAAATTGAGGGAATATCTAAGGTTCCAGCTCGTATAGAGAAGCTCATTTCCGAAAAGCAGTACTATGCCGCTGTTCAGTTTCATGTTCAGTCGATGTTGATGCTTGAACGTGAGGGGCTTCAGACGGTCGGTGCCCTTCAAGATGTTCGCTCTGAGTTAACAAAGTTGAGAGGAGTTCTGTTTTATAAAGTGCTAGAGGATCTACACGCTCATCTTTATAACAAGGGGGAATATAGCTCTGCTGCATTGAGCTTGCATGAAAGGGAAGATGAGGTACCAACCACCACAGCCGTTGTATTTTCTATGAGTAATTCACAATCCCTGTCTCGAAGAACCAGGTTGTTAAAAGGTGATAATCAGCTTGGTATTCATGGAGATGGATCATATAGGGCAGGTTCTGTTGATGGAGGTTCTTCTGTTGATGGTCCTGATGAGGAGGGCACTGAATTGCATGATGAAGCTACCTCAGATGGGCATTCAACATCAGCTAGGGCCAACGGTGATGTCAAAATTGTTCCTCGTCAAATGCCAACATGGCTTCAGTATTCCACTCCGGATGAATTTCTTGAAACAATCAAGAAAAGTGATGCGCCACTTCATGTCAAGTATTTGCAGACTATGGTCGAGTGCCTTTGCATGCTTAGGAAAGTTGCGGCTGCTGGTGCTATGATATGCCAAAGACTGCGACCTACACTTCATGATATTATCACATCCAAAATTAAAACTCATGCCGAAGTAGTTAATTCTTCGAGGTCTGGCATCGGTCAGGCTGCCAGAACTGCTACTCCTGGTCTACATTTCATGAAGGGACAGTTAGAAAGTTATCAGTTGCCAAAACAGAAGCGTCAGAATGGGATATCACTAGCTGGAACTCTATTGGCAGCGAGCCCTGTCTCACCTGTGATGGCACCTGCGGGGAAAGCACAGGCTGCAGCAAAAGATCTTCTGAATTCTATTTTGGATGCTGTTGTTCGGATATTTGAGAACCATGTTGTTGTTGGGGAGCTTTTAGAATTAAAGTCATCTCAACAAGCAGACATGAATACACCAAAATCAATGCCAACAGACATAAATATTAATCCCGATTCTGAATCATCTCAAGTTACTGGAGGCTACAGCATTGGTTTTTCCTTAACGGTATTACAGAGTGAATGCCAGCAACTTATTTGTGAGATACTGCGGGCAACTCCTGAAGCTGCATCTGCAGATGCTGCTGTACAAACAGCTAGATTTGCGAGCAAGGCCCCTTCCAAAGATAAGAGGGACAGTTCAGAGGAGGGTCTTACCTTTGCTTTTCGCTTCACAGATGCTACTATTTCCATTCCCAACCAAGGGGTTGATCTCATTCGTCAAGGCTGGAGTAGAAAGGGTCCAAATGTATTACAAGAAGGTTATGGGTCGGCAGCTGTCTTGCCTGAGCAAGGCATATATCTAGCAGCATCTGTATACCGGCCTGTTATTCAGTTTACAGATAAGGTCGCTTCTATGCTTCCAAAAAAGTATTCCCAGCTAAGTAATGATGGGTTGCTGGCTTTTGTGGAGAACTTTGTGAAGGACCATTTCTTACCAACGATGTTTGTAGACTACAGAAAAGGCGTACAACAAGCTATATCAAGTCCAGCTTCATTCCGACCGAGAGCTCATGCTGCTGCATCTTATACTCCTTCAATTGAGAAGGGTCGTCCCGTCTTACAGGGACTTCTGGCAATAGATTTTCTAGCAAAAGAGGTGCTTGGTTGGGCACAAGCTATGCCTAAATTTGCTGGTGACCTTGCAAAGTATGTTCAAACTTTTCTGGAGCGAACCTATGAAAGATGCCGGACCTCATACATGGAGGCTGTTCTGGAGAAGCAGAGTTACATGCTCATTGGCAGACATGATATCGAGCAATTGATGCGACTTGATCCTGCAAGTGCATATTTACCAAATGCATTTGGGCAGTCAAACATGGAAACCCATGCTTCGGATGCTGAAAATTACGAGGTTGAACTAGAAATGAGTGAGTTACTGTTGAATTTGCGGCCTATTAAGCAGGATAATCTGATTCGTGATGACAACAAGCTTATATTGCTGGCTTCCCTCAGTGATTCATTGGAGTATGTTGCAGAATCTATTGAAAGGCTTGGAGAGACTACATTTAACGCTCCAAATCAAGTAGAAGATAATGGCAAGAACCGTCACCGACGAACAAGTAGTGCTCCTGCTAGGGATCTGGCATCTTTTGCAGATGAGTACAGAAAATTGGCGATTGACTGCCTTAAGGTTTTACGTGTTGAGATGCAATTGGAGACAATTTTCCATATGCAGGAAATGACAAACAGGGAATATATGGAAGACCAGGATGCTGAAGAGCCAGATGACTTCATTATTTCACTGACTGCACAGATAACGCGTAGGGATGAGGAGATGGCACCTTTTGTTTCGGCGCTGAAGCGGAATTACATATTTGGTGGGATTTGTAGCGTTGCAGCAAATGCATCCATCAGGGCTTTGGCTGATATGAAATGCATTAATCTTTTTGGGGTTCAGCAGATATGTCGGAATTCAATTGCACTTGAACAGGCACTGGCTGCTATCCCAGCAATTAACAGTGAAGGTGTACAACAGAGACTTGATCATGTCCGAACTTACTATGAGCTTCTAAACATGCCATTTGAGGCCGTGCTTGCCTTCATAACGGAGCATGAGCACTTGTTTACAGCTGCCGAGTATGCAAATCTTCTAAAGGTCCAGGTACCTGGTAGGGAGATTCCAGCAGACGCAAAAGATCGTGTATCGGAGATTCTATCCCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0003006 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0005938 GO:0006605 GO:0006612 GO:0006810 GO:0006886 GO:0006887 GO:0006892 GO:0006893 GO:0006903 GO:0007154 GO:0007275 GO:0008037 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009506 GO:0009791 GO:0009856 GO:0009875 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0022414 GO:0030054 GO:0031982 GO:0032501 GO:0032502 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043230 GO:0044237 GO:0044249 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0045184 GO:0046903 GO:0046907 GO:0048193 GO:0048316 GO:0048354 GO:0048359 GO:0048544 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051704 GO:0055044 GO:0060321 GO:0061458 GO:0070062 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0072657 GO:0090150 GO:0098876 GO:0099023 GO:0099568 GO:1903561

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec8_exocyst

Protein Analysis

1068

Amino Acids

118.95

Weight (kDa)

5.64

Isoelectric Point (pI)

49.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec8_N	PF04048	16 - 151	1.6e-37	Exocyst complex component Sec8 N-terminal
Vps54_N	PF10475	23 - 200	9.1e-08	Vacuolar-sorting protein 54, of GARP complex
EXOC6_Sec15_N	PF20651	61 - 215	3.4e-08	Exocyst complex component EXOC6/Sec15, N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10380 AT3G10380
fragaria_vesca	FvH4_7g18760 FvH4_7g18760
malus_domestica	MD01G1103100.v1.1 MD07G1169800.v1.1
prunus_persica	Prupe.2G208700_v2.0.a1 Prupe.2G208700_v2.0.a1
pyrus_communis	pycom01g12960 pycom07g16370
rosa_chinensis	RchiOBHm_Chr1g0362571
rosa_laevigata	RLG00000027638
rosa_multiflora	Rmu_sc0005725.1_g000007
rosa_roxburghii	Rroxscaffold_4G00293960
rosa_rugosa	Rorug01G0299600 Rorug01G0299600 Rorug01G0299600 Rorug01G0299700
rosa_samantha	Rh1AG308300 Rh1BG271600 Rh1CG289200 Rh1DG301900
rosa_wichuraiana	Rw1G027370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	594, 627
AarI	CACCTGC	1 cut(s)	1327
Acc36I	ACCTGC	2 cut(s)	791, 1327
Acc65I	GGTACC	3 cut(s)	366, 682, 3142
AccB1I	GGYRCC	6 cut(s)	366, 539, 682, 1315, 2818, 3142
AccI	GTMKAC	3 cut(s)	1201, 1854, 1989
AccII	CGCG	1 cut(s)	2800
AccIII	TCCGGA	1 cut(s)	961
AciI	CCGC	7 cut(s)	340, 477, 1061, 1322, 1588, 2428, 2842
AclWI	GGATC	4 cut(s)	615, 796, 2306, 2625
AcsI	RAATTY	6 cut(s)	6, 968, 1357, 2165, 2422, 2950
AcuI	CTGAAG	7 cut(s)	182, 336, 512, 932, 1620, 2775, 2858
AcyI	GRCGYC	1 cut(s)	328
AfaI	GTAC	9 cut(s)	207, 368, 470, 684, 1626, 2007, 2642, 3009, 3144
AfiI	CCNNNNNNNGG	6 cut(s)	879, 1739, 1740, 1829, 2371, 2713
AflII	CTTAAG	1 cut(s)	2666
AflIII	ACRYGT	2 cut(s)	2677, 2798
AgeI	ACCGGT	1 cut(s)	369
AjnI	CCWGG	5 cut(s)	743, 1195, 2745, 3138, 3145
AjuI	GAANNNNNNNTTGG	4 cut(s)	1349, 1381, 1894, 1926
AloI	GAACNNNNNNTCC	2 cut(s)	1177, 1209
Alw21I	GWGCWC	3 cut(s)	2050, 2608, 3099
Alw26I	GTCTC	7 cut(s)	27, 33, 738, 1306, 2531, 2690, 3010
AlwI	GGATC	4 cut(s)	615, 796, 2306, 2625
AlwNI	CAGNNNCTG	4 cut(s)	806, 1619, 1850, 2974
Ama87I	CYCGRG	1 cut(s)	30
Aor13HI	TCCGGA	1 cut(s)	961
AoxI	GGCC	5 cut(s)	900, 1650, 1859, 2429, 3066
ApoI	RAATTY	6 cut(s)	6, 968, 1357, 2165, 2422, 2950
AseI	ATTAAT	2 cut(s)	1485, 2919
AsiGI	ACCGGT	1 cut(s)	369
Asp718I	GGTACC	3 cut(s)	366, 682, 3142
AspLEI	GCGC	3 cut(s)	387, 1000, 2836
AspS9I	GGNCC	7 cut(s)	833, 900, 1651, 1778, 1963, 2229, 3136
AsuHPI	GGTGA	6 cut(s)	388, 770, 920, 1296, 2186, 2579
AvaI	CYCGRG	1 cut(s)	30
AvaII	GGWCC	5 cut(s)	833, 1778, 1963, 2229, 3136
BaeGI	GKGCMC	3 cut(s)	544, 851, 2152
BanI	GGYRCC	6 cut(s)	366, 539, 682, 1315, 2818, 3142
BanII	GRGCYC	2 cut(s)	1298, 2050
BarI	GAAGNNNNNNTAC	6 cut(s)	666, 698, 2249, 2281, 2831, 2863
BbsI	GAAGAC	1 cut(s)	2748
Bbv12I	GWGCWC	3 cut(s)	2050, 2608, 3099
BccI	CCATC	9 cut(s)	8, 779, 806, 824, 872, 1306, 1922, 2809, 2897
BceAI	ACGGC	2 cut(s)	683, 3053
BcgI	CGANNNNNNTGC	4 cut(s)	490, 524, 2927, 2961
BciT130I	CCWGG	5 cut(s)	745, 1197, 2747, 3140, 3147
BclI	TGATCA	1 cut(s)	3022
BcoDI	GTCTC	7 cut(s)	27, 33, 738, 1306, 2531, 2690, 3010
BfaI	CTAG	8 cut(s)	602, 897, 1271, 1635, 1841, 2126, 2399, 2613
BfmI	CTRYAG	5 cut(s)	84, 1338, 1522, 1611, 1993
BfoI	RGCGCY	1 cut(s)	2837
BfrI	CTTAAG	1 cut(s)	2666
BfuAI	ACCTGC	2 cut(s)	791, 1327
BglI	GCCNNNNNGGC	1 cut(s)	943
BglII	AGATCT	2 cut(s)	255, 1348
BmcAI	AGTACT	1 cut(s)	470
Bme1390I	CCNGG	5 cut(s)	745, 1197, 2747, 3140, 3147
Bme18I	GGWCC	5 cut(s)	833, 1778, 1963, 2229, 3136
BmeT110I	CYCGRG	1 cut(s)	30
BmgT120I	GGNCC	7 cut(s)	833, 900, 1651, 1778, 1963, 2229, 3136
BmiI	GGNNCC	9 cut(s)	368, 432, 541, 684, 1317, 1653, 1779, 2820, 3144
BmrFI	CCNGG	5 cut(s)	745, 1197, 2747, 3140, 3147
BoxI	GACNNNNGTC	1 cut(s)	1028
BpiI	GAAGAC	1 cut(s)	2748
BpmI	CTGGAG	4 cut(s)	1536, 1786, 2225, 2273
Bpu10I	CCTNAGC	2 cut(s)	1049, 1824
BpuEI	CTTGAG	1 cut(s)	1491
BsaAI	YACGTR	1 cut(s)	2678
BsaHI	GRCGYC	1 cut(s)	328
BsaJI	CCNNGG	1 cut(s)	1738
BsaWI	WCCGGW	2 cut(s)	369, 961
BsaXI	ACNNNNNCTCC	4 cut(s)	380, 410, 1177, 1207
Bsc4I	CCNNNNNNNGG	6 cut(s)	879, 1739, 1740, 1829, 2371, 2713
Bse118I	RCCGGY	2 cut(s)	369, 1857
Bse1I	ACTGG	2 cut(s)	1519, 2979
Bse3DI	GCAATG	1 cut(s)	380
BseAI	TCCGGA	1 cut(s)	961
BseBI	CCWGG	5 cut(s)	745, 1197, 2747, 3140, 3147
BseDI	CCNNGG	1 cut(s)	1738
BseGI	GGATG	9 cut(s)	128, 202, 970, 1118, 1375, 2380, 2755, 2812, 2885
BseLI	CCNNNNNNNGG	6 cut(s)	879, 1739, 1740, 1829, 2371, 2713
BseMI	GCAATG	1 cut(s)	380
BseMII	CTCAG	5 cut(s)	38, 552, 888, 1815, 2503
BseNI	ACTGG	2 cut(s)	1519, 2979
BseRI	GAGGAG	5 cut(s)	200, 594, 857, 1697, 2825
BseSI	GKGCMC	3 cut(s)	544, 851, 2152
BseYI	CCCAGC	3 cut(s)	78, 1914, 2986
BsgI	GTGCAG	1 cut(s)	2772
Bsh1236I	CGCG	1 cut(s)	2800
Bsh1285I	CGRYCG	3 cut(s)	374, 537, 2042
BshFI	GGCC	5 cut(s)	902, 1652, 1861, 2431, 3068
BshNI	GGYRCC	6 cut(s)	366, 539, 682, 1315, 2818, 3142
BshTI	ACCGGT	1 cut(s)	369
BsiEI	CGRYCG	3 cut(s)	374, 537, 2042
BsiHKAI	GWGCWC	3 cut(s)	2050, 2608, 3099
BsiHKCI	CYCGRG	1 cut(s)	30
BsiSI	CCGG	4 cut(s)	370, 962, 1858, 2227
BslFI	GGGAC	4 cut(s)	1230, 1685, 2076, 2118
BslI	CCNNNNNNNGG	6 cut(s)	879, 1739, 1740, 1829, 2371, 2713
BsmAI	GTCTC	7 cut(s)	27, 33, 738, 1306, 2531, 2690, 3010
BsmFI	GGGAC	4 cut(s)	1230, 1685, 2076, 2118
BsmI	GAATGC	2 cut(s)	883, 1565
BsnI	GGCC	5 cut(s)	902, 1652, 1861, 2431, 3068
BsoBI	CYCGRG	1 cut(s)	30
Bsp1286I	GDGCHC	7 cut(s)	544, 851, 1298, 2050, 2152, 2608, 3099
Bsp13I	TCCGGA	1 cut(s)	961
Bsp1407I	TGTACA	3 cut(s)	205, 1624, 3007
BspACI	CCGC	7 cut(s)	340, 477, 1061, 1322, 1588, 2428, 2842
BspANI	GGCC	5 cut(s)	902, 1652, 1861, 2431, 3068
BspCNI	CTCAG	5 cut(s)	39, 553, 887, 1816, 2502
BspEI	TCCGGA	1 cut(s)	961
BspFNI	CGCG	1 cut(s)	2800
BspHI	TCATGA	2 cut(s)	1105, 1209
BspLI	GGNNCC	9 cut(s)	368, 432, 541, 684, 1317, 1653, 1779, 2820, 3144
BspMAI	CTGCAG	3 cut(s)	88, 1342, 1615
BspMI	ACCTGC	2 cut(s)	791, 1327
BspPI	GGATC	4 cut(s)	615, 796, 2306, 2625
BspQI	GCTCTTC	1 cut(s)	2751
BspT107I	GGYRCC	6 cut(s)	366, 539, 682, 1315, 2818, 3142
BspTI	CTTAAG	1 cut(s)	2666
BsrDI	GCAATG	1 cut(s)	380
BsrFI	RCCGGY	2 cut(s)	369, 1857
BsrGI	TGTACA	3 cut(s)	205, 1624, 3007
BsrI	ACTGG	2 cut(s)	1519, 2979
BssAI	RCCGGY	2 cut(s)	369, 1857
BssECI	CCNNGG	1 cut(s)	1738
BssNAI	GTATAC	1 cut(s)	1855
BssNI	GRCGYC	1 cut(s)	328
BssT1I	CCWWGG	1 cut(s)	1738
Bst1107I	GTATAC	1 cut(s)	1855
Bst2UI	CCWGG	5 cut(s)	745, 1197, 2747, 3140, 3147
Bst6I	CTCTTC	2 cut(s)	48, 2751
BstACI	GRCGYC	1 cut(s)	328
BstAFI	CTTAAG	1 cut(s)	2666
BstAPI	GCANNNNNTGC	6 cut(s)	1337, 1619, 2302, 2630, 2882, 2978
BstAUI	TGTACA	3 cut(s)	205, 1624, 3007
BstBAI	YACGTR	1 cut(s)	2678
BstC8I	GCNNGC	9 cut(s)	662, 1046, 1294, 1565, 1590, 1645, 1938, 2481, 3075
BstDEI	CTNAG	9 cut(s)	47, 332, 426, 561, 874, 1049, 1824, 1919, 2489
BstEII	GGTNACC	1 cut(s)	2174
BstENI	CCTNNNNNAGG	1 cut(s)	1827
BstF5I	GGATG	9 cut(s)	128, 202, 970, 1118, 1375, 2380, 2755, 2812, 2885
BstFNI	CGCG	1 cut(s)	2800
BstH2I	RGCGCY	1 cut(s)	2837
BstHHI	GCGC	3 cut(s)	387, 1000, 2836
BstMAI	GTCTC	7 cut(s)	27, 33, 738, 1306, 2531, 2690, 3010
BstMCI	CGRYCG	3 cut(s)	374, 537, 2042
BstNI	CCWGG	5 cut(s)	745, 1197, 2747, 3140, 3147
BstNSI	RCATGY	3 cut(s)	1048, 2272, 3058
BstPAI	GACNNNNGTC	1 cut(s)	1028
BstPI	GGTNACC	1 cut(s)	2174
BstSCI	CCNGG	5 cut(s)	743, 1195, 2745, 3138, 3145
BstSFI	CTRYAG	5 cut(s)	84, 1338, 1522, 1611, 1993
BstSLI	GKGCMC	3 cut(s)	544, 851, 2152
BstUI	CGCG	1 cut(s)	2800
BstV2I	GAAGAC	1 cut(s)	2748
BstX2I	RGATCY	4 cut(s)	255, 607, 1348, 2617
BstXI	CCANNNNNNTGG	1 cut(s)	3146
BstYI	RGATCY	4 cut(s)	255, 607, 1348, 2617
BstZ17I	GTATAC	1 cut(s)	1855
BsuRI	GGCC	5 cut(s)	902, 1652, 1861, 2431, 3068
BtsCI	GGATG	9 cut(s)	128, 202, 970, 1118, 1375, 2380, 2755, 2812, 2885
BtsIMutI	CAGTG	6 cut(s)	226, 849, 2497, 2780, 2972, 3004
BveI	ACCTGC	2 cut(s)	791, 1327
Cac8I	GCNNGC	9 cut(s)	662, 1046, 1294, 1565, 1590, 1645, 1938, 2481, 3075
CaiI	CAGNNNCTG	4 cut(s)	806, 1619, 1850, 2974
CciI	TCATGA	2 cut(s)	1105, 1209
CfoI	GCGC	3 cut(s)	387, 1000, 2836
Cfr10I	RCCGGY	2 cut(s)	369, 1857
Cfr13I	GGNCC	7 cut(s)	833, 900, 1651, 1778, 1963, 2229, 3136
CseI	GACGC	3 cut(s)	317, 1241, 3176
CsiI	ACCWGGT	2 cut(s)	743, 3145
Csp6I	GTAC	9 cut(s)	206, 367, 469, 683, 1625, 2006, 2641, 3008, 3143
CspAI	ACCGGT	1 cut(s)	369
CspCI	CAANNNNNGTGG	2 cut(s)	682, 717
CviQI	GTAC	9 cut(s)	206, 367, 469, 683, 1625, 2006, 2641, 3008, 3143
DdeI	CTNAG	9 cut(s)	47, 332, 426, 561, 874, 1049, 1824, 1919, 2489
Eam1104I	CTCTTC	2 cut(s)	48, 2751
EarI	CTCTTC	2 cut(s)	48, 2751
Ecl136II	GAGCTC	1 cut(s)	2048
Eco130I	CCWWGG	1 cut(s)	1738
Eco24I	GRGCYC	2 cut(s)	1298, 2050
Eco32I	GATATC	2 cut(s)	1266, 2290
Eco47I	GGWCC	5 cut(s)	833, 1778, 1963, 2229, 3136
Eco53kI	GAGCTC	1 cut(s)	2048
Eco57I	CTGAAG	7 cut(s)	182, 336, 512, 932, 1620, 2775, 2858
Eco88I	CYCGRG	1 cut(s)	30
Eco91I	GGTNACC	1 cut(s)	2174
EcoICRI	GAGCTC	1 cut(s)	2048
EcoNI	CCTNNNNNAGG	1 cut(s)	1827
EcoO109I	RGGNCCY	1 cut(s)	1651
EcoO65I	GGTNACC	1 cut(s)	2174
EcoRI	GAATTC	2 cut(s)	1357, 2950
EcoRII	CCWGG	5 cut(s)	743, 1195, 2745, 3138, 3145
EcoRV	GATATC	2 cut(s)	1266, 2290
EcoT14I	CCWWGG	1 cut(s)	1738
EcoT22I	ATGCAT	3 cut(s)	2341, 2887, 2918
EcoT38I	GRGCYC	2 cut(s)	1298, 2050
ErhI	CCWWGG	1 cut(s)	1738
FalI	AAGNNNNNCTT	4 cut(s)	2014, 2046, 2124, 2156
FaqI	GGGAC	4 cut(s)	1230, 1685, 2076, 2118
FauI	CCCGC	3 cut(s)	347, 1315, 1581
FauNDI	CATATG	1 cut(s)	2709
FbaI	TGATCA	1 cut(s)	3022
FblI	GTMKAC	3 cut(s)	1201, 1854, 1989
FokI	GGATG	9 cut(s)	115, 209, 977, 1105, 1382, 2387, 2762, 2819, 2872
FriOI	GRGCYC	2 cut(s)	1298, 2050
FspBI	CTAG	8 cut(s)	602, 897, 1271, 1635, 1841, 2126, 2399, 2613
GlaI	GCGC	3 cut(s)	386, 999, 2835
GsaI	CCCAGC	3 cut(s)	82, 1918, 2990
GsuI	CTGGAG	4 cut(s)	1536, 1786, 2225, 2273
HaeII	RGCGCY	1 cut(s)	2837
HaeIII	GGCC	5 cut(s)	902, 1652, 1861, 2431, 3068
HapII	CCGG	4 cut(s)	370, 962, 1858, 2227
HgaI	GACGC	3 cut(s)	317, 1241, 3176
HhaI	GCGC	3 cut(s)	387, 1000, 2836
Hin1I	GRCGYC	1 cut(s)	328
Hin6I	GCGC	3 cut(s)	385, 998, 2834
HinP1I	GCGC	3 cut(s)	385, 998, 2834
HincII	GTYRAC	1 cut(s)	567
HindII	GTYRAC	1 cut(s)	567
HindIII	AAGCTT	1 cut(s)	2468
HinfI	GANTC	9 cut(s)	98, 275, 1493, 1499, 2452, 2495, 2516, 3157, 3190
HpaI	GTTAAC	1 cut(s)	567
HpaII	CCGG	4 cut(s)	370, 962, 1858, 2227
HphI	GGTGA	6 cut(s)	388, 770, 920, 1296, 2186, 2579
Hpy166II	GTNNAC	8 cut(s)	208, 567, 1202, 1855, 1875, 1990, 3008, 3105
Hpy8I	GTNNAC	8 cut(s)	208, 567, 1202, 1855, 1875, 1990, 3008, 3105
Hpy99I	CGWCG	1 cut(s)	2595
HpyAV	CCTTC	9 cut(s)	554, 1207, 1665, 1790, 1954, 2077, 2082, 2996, 3088
HpyCH4IV	ACGT	2 cut(s)	517, 2677
HpyF3I	CTNAG	9 cut(s)	47, 332, 426, 561, 874, 1049, 1824, 1919, 2489
HpySE526I	ACGT	2 cut(s)	517, 2677
Hsp92I	GRCGYC	1 cut(s)	328
HspAI	GCGC	3 cut(s)	385, 998, 2834
Kpn2I	TCCGGA	1 cut(s)	961
KpnI	GGTACC	3 cut(s)	370, 686, 3146
Ksp22I	TGATCA	1 cut(s)	3022
KspAI	GTTAAC	1 cut(s)	567
LguI	GCTCTTC	1 cut(s)	2751
LmnI	GCTCC	5 cut(s)	1411, 2206, 2557, 2611, 3088
MabI	ACCWGGT	2 cut(s)	743, 3145
MaeI	CTAG	8 cut(s)	602, 897, 1271, 1635, 1841, 2126, 2399, 2613
MaeII	ACGT	2 cut(s)	517, 2677
MaeIII	GTNAC	6 cut(s)	376, 1510, 2174, 2264, 2412, 2585
MfeI	CAATTG	4 cut(s)	2076, 2297, 2690, 2955
MflI	RGATCY	4 cut(s)	255, 607, 1348, 2617
MhlI	GDGCHC	7 cut(s)	544, 851, 1298, 2050, 2152, 2608, 3099
MluI	ACGCGT	1 cut(s)	2798
MmeI	TCCRAC	2 cut(s)	2062, 2927
Mph1103I	ATGCAT	3 cut(s)	2341, 2887, 2918
MroI	TCCGGA	1 cut(s)	961
MslI	CAYNNNNRTG	1 cut(s)	783
MspA1I	CMGCKG	3 cut(s)	479, 1814, 3110
MspCI	CTTAAG	1 cut(s)	2666
MspI	CCGG	4 cut(s)	370, 962, 1858, 2227
MspR9I	CCNGG	5 cut(s)	745, 1197, 2747, 3140, 3147
MunI	CAATTG	4 cut(s)	2076, 2297, 2690, 2955
Mva1269I	GAATGC	2 cut(s)	883, 1565
MvaI	CCWGG	5 cut(s)	745, 1197, 2747, 3140, 3147
MvnI	CGCG	1 cut(s)	2800
NdeI	CATATG	1 cut(s)	2709
NlaIV	GGNNCC	9 cut(s)	368, 432, 541, 684, 1317, 1653, 1779, 2820, 3144
NmeAIII	GCCGAG	1 cut(s)	3139
NmuCI	GTSAC	3 cut(s)	376, 2174, 2585
NsiI	ATGCAT	3 cut(s)	2341, 2887, 2918
NspI	RCATGY	3 cut(s)	1048, 2272, 3058
PaeI	GCATGC	1 cut(s)	1048
PaeR7I	CTCGAG	1 cut(s)	30
PagI	TCATGA	2 cut(s)	1105, 1209
PaqCI	CACCTGC	1 cut(s)	1327
PciSI	GCTCTTC	1 cut(s)	2751
PctI	GAATGC	2 cut(s)	883, 1565
PfeI	GAWTC	9 cut(s)	98, 275, 1493, 1499, 2452, 2495, 2516, 3157, 3190
PinAI	ACCGGT	1 cut(s)	369
Ppu21I	YACGTR	1 cut(s)	2678
PshAI	GACNNNNGTC	1 cut(s)	1028
PshBI	ATTAAT	2 cut(s)	1485, 2919
PsiI	TTATAA	2 cut(s)	594, 627
Psp124BI	GAGCTC	1 cut(s)	2050
Psp6I	CCWGG	5 cut(s)	743, 1195, 2745, 3138, 3145
PspEI	GGTNACC	1 cut(s)	2174
PspFI	CCCAGC	3 cut(s)	78, 1914, 2986
PspGI	CCWGG	5 cut(s)	743, 1195, 2745, 3138, 3145
PspN4I	GGNNCC	9 cut(s)	368, 432, 541, 684, 1317, 1653, 1779, 2820, 3144
PspPI	GGNCC	7 cut(s)	833, 900, 1651, 1778, 1963, 2229, 3136
PstI	CTGCAG	3 cut(s)	88, 1342, 1615
PstNI	CAGNNNCTG	4 cut(s)	806, 1619, 1850, 2974
PsuI	RGATCY	4 cut(s)	255, 607, 1348, 2617
PvuII	CAGCTG	2 cut(s)	1814, 3110
RsaI	GTAC	9 cut(s)	207, 368, 470, 684, 1626, 2007, 2642, 3009, 3144
RsaNI	GTAC	9 cut(s)	206, 367, 469, 683, 1625, 2006, 2641, 3008, 3143
RseI	CAYNNNNRTG	1 cut(s)	783
SacI	GAGCTC	1 cut(s)	2050
SapI	GCTCTTC	1 cut(s)	2751
Sau96I	GGNCC	7 cut(s)	833, 900, 1651, 1778, 1963, 2229, 3136
ScaI	AGTACT	1 cut(s)	470
ScrFI	CCNGG	5 cut(s)	745, 1197, 2747, 3140, 3147
SduI	GDGCHC	7 cut(s)	544, 851, 1298, 2050, 2152, 2608, 3099
SexAI	ACCWGGT	2 cut(s)	743, 3145
SfcI	CTRYAG	5 cut(s)	84, 1338, 1522, 1611, 1993
Sfr274I	CTCGAG	1 cut(s)	30
SinI	GGWCC	5 cut(s)	833, 1778, 1963, 2229, 3136
SlaI	CTCGAG	1 cut(s)	30
SmiMI	CAYNNNNRTG	1 cut(s)	783
SmlI	CTYRAG	3 cut(s)	30, 1506, 2666
SmoI	CTYRAG	3 cut(s)	30, 1506, 2666
SphI	GCATGC	1 cut(s)	1048
SsiI	CCGC	7 cut(s)	340, 477, 1061, 1322, 1588, 2428, 2842
SspI	AATATT	2 cut(s)	289, 1483
SspMI	CTAG	8 cut(s)	602, 897, 1271, 1635, 1841, 2126, 2399, 2613
SstI	GAGCTC	1 cut(s)	2050
StyD4I	CCNGG	5 cut(s)	743, 1195, 2745, 3138, 3145
StyI	CCWWGG	1 cut(s)	1738
TaiI	ACGT	2 cut(s)	520, 2680
TaqI	TCGA	7 cut(s)	31, 153, 500, 736, 1032, 1157, 2292
TaqII	GACCGA	2 cut(s)	1160, 2056
TatI	WGTACW	5 cut(s)	205, 468, 1624, 2640, 3007
TauI	GCSGC	3 cut(s)	479, 1064, 2431
TfiI	GAWTC	9 cut(s)	98, 275, 1493, 1499, 2452, 2495, 2516, 3157, 3190
TscAI	CASTG	6 cut(s)	226, 856, 2497, 2787, 2979, 3004
TseFI	GTSAC	3 cut(s)	376, 2174, 2585
Tsp45I	GTSAC	3 cut(s)	376, 2174, 2585
TspGWI	ACGGA	1 cut(s)	3101
TspRI	CASTG	6 cut(s)	226, 856, 2497, 2787, 2979, 3004
Vha464I	CTTAAG	1 cut(s)	2666
VpaK11BI	GGWCC	5 cut(s)	833, 1778, 1963, 2229, 3136
VspI	ATTAAT	2 cut(s)	1485, 2919
XagI	CCTNNNNNAGG	1 cut(s)	1827
XapI	RAATTY	6 cut(s)	6, 968, 1357, 2165, 2422, 2950
XceI	RCATGY	3 cut(s)	1048, 2272, 3058
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1403, 2896
XhoI	CTCGAG	1 cut(s)	30
XmiI	GTMKAC	3 cut(s)	1201, 1854, 1989
XspI	CTAG	8 cut(s)	602, 897, 1271, 1635, 1841, 2126, 2399, 2613
ZrmI	AGTACT	1 cut(s)	470
Zsp2I	ATGCAT	3 cut(s)	2341, 2887, 2918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.