Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0009532

Physical Location & Seq

Genomic Coordinates Reverse (-)

32471527 .. 32475050

Gene Structure 3524 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1238300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGTCTTCCAAGCCCAAATCTACTGTATCTGATACTCCTAAAAAAGCATCACCAGCAGCAACCCCTCCACCTCGACTTAGTAAACTCGGCCGGGGAGTTGCTAAATCCGAATCCGATTCACCTTCACCTTTGCAAAATTCTCGCCTTTCAGTTGATCGCTCCCCGCGCTCTGTCAAATCCAAGCCCGCCCTTGAGCGTCGGTCACCCAAGATCACTACCCCCACCTCCACCCCCCCTGAAAAACAACCGACACGGGTTGCAAAGGGATCAGAGATACAGGCTCAATTAGGTCTTGTTCAGGAAGATCTGAAGAAGGCAAAGGAGCAGATAATTTTGATTGAGAAAGAGAAGGCAAAAGCAATTGACGAATTGAAAGAAGCGCAGAAAGTGGCCGATGAGGCACATGAGAAACTCAGAGAGGCTTTGGTGGCTCAAAAGCGAGCCGAGGACAATTCTGAAATTGAGAAGTTTCGCGCTGTTGAGTTGGAGCAGGCAGGAATCGAAGCATCCCAAAAGAAGGAAGAGGAATGGGTGAAAGAGCTTGAAGCTGTGAGGAACCAACATGCTCTGGATGTGTCCACTCTACTCTCTACCACTCAGGAACTTCAAAGGGTGAAGCAAGAACTGACCATGACCTGTGATGCCAAAAACCAGGCACTGACTCATGCTGATGATGCAACCAAGATTGCCGAGATCCATGCCAATAAGGTGGAGATTCTTTTAGCTGAGTTGGCTCAGTTAAGGGCATTACTAGATGCAAAGCTTGAAACAGAGGCTAGCGAGAGCAACAAGATGGTGGTAAGCCTTAAATCGGAGGTAGATTCTCTCAAACAAGAGCTTGATAAAGCAAAAGGTTACAAGGAGAGATTAATAGAGAAAGAGGCTTCCATTGAACAGCTCAACGTTGAGCTAGAATCAGCCAAGATGGCTGAATCTTATGCACGTAGTGTAGTTGAGGAGTGGAAAATTAGGGTTGAGGAATTAGAGATGCAGGTTGAAGAAGCAAATAAGTTGGAGAGGTCTGCATCAGAGTCTTTAGATTCAGTCATGAAACAACTCGAGGGAAACAATGAGTTGTTGCATGATGCAGAATCTGAAATTTCTGCTCTTAAAGGGAAGGTCAGCTTGCTGGAAATTACAATTGGAAGACATAGAGGGGATCTTGAGGACTCAGAACTTTGTCTTGAGATGGCCAAAAGAGAAAATTATGAAATGGCGAAAATGGTTGAGTCGCTTAAGTCTGAGCTTGAAACTCTGAAGGAGGAGAAAATGCAGGCTTTAAGCAATAAGAAGCTTGCCTCATCCAGTATTCAAACCCTATTAGAAGAGAAAAACAAACTCATAAATGAGTTGGAAAATTCTAGGGATGAAGAAGAGAAGAGCAAGAAAGCAATGGAAAGCTTAGCTTCCGCCTTACATGAAGTCTCCGCAGAAGCAAGAGAAGCCAAAGAAAAGCTGCTGTCTAATCAAGCTGAGCTTGAGAGTAACAAGTCGCAGATAGAAGACCTGAAAATGGTCTTGAAAGCAACCAACGAAAAGTATGAAGGCATGCTTGATGATGCAAAACACGAAGTCTATCTTGTTACAAGTAACCTTGAACAATGCAAGACTGAATTCCAAAACGCAAAGGCCGACTGGGAGAAGAGAGAACTTCACCTGGCGAATTGGGTGAAACATTCAGAAGAAGAAAACTCTTTGAAGGAAAAAGAAATAAGCAGGCTGCAAAATTTGCTCACAAAATCCAATGAAGAAGCTTGTGCTTTGAAGGACGAAGAAGCCCAGTTGAAAGAGAGTCTGAACGAAGTTGAATCTGAAGTGATCTATTTGCAGGAAGCTCTTGCAGAAGCAAAGGCCGAGAACATGAAATTAAAGGAAAGCATATTGGACAAAGAAAATGAGTTCCAGTGTATTGTTCACGAAAACGATGAACTCCAAGACAAGGAGGCAGCTTCTCTTAAAAAGGTTGGGGAATTGTCTAGGTTACTGGAAGAAGCTGTAGCGAAGAAGCGAGCCAAGGAAAATGGTGAGCTGACAGATAGTGAGAAAGACTATGATTTGCTTCCAAAGGTAGTTGAATTCTCTGAAGAGAATGGGCATGGAGGAGAAGAGAAACAGAAAATGGACCTTGCACCAAGTCAAGGTGAGGAGCACAAGAAGGAAAGCTTATGGGAAGAGAATAATAATGTTGTCATTAATGGCAAGGCTGAGGAAATGGACTACGCTAAAAGTGATAATGTGAAGGGCAAACCAAAAGAAGATGAGAGCAAAGAGAAGGAAGATGAATCAGTAGAGGTGGAGTATAAGATGTGGGAGAGCTGCAAGATTGAAAAGAAGGAATTCTCGCTGGAGAGGGAACAAGAGCAGGAATCGTTTGAAGAGGAAGTGGAGTCAAAGGTGGGGGGTGGCGAGGGGTTTGATGAGATAAATGGAGTAACTTCAACGGAATGTGTGGACGAAAGCAGGACCTCTCCATCAAAGCAACAGAAGAAGAAGAAGCCTTTACTCCGCAAGTTCGGAAGCCTACTGAAGAAGAAGGGCACAAGCAACAACCAGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005856 GO:0005875 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0015630 GO:0016043 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048285 GO:0051321 GO:0061982 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

853

Amino Acids

96.24

Weight (kDa)

5.02

Isoelectric Point (pI)

54.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	86 - 513	3.3e-16	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009532)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02930 AT3G02930 AT3G02930 AT5G16730
fragaria_vesca	FvH4_7g34141 FvH4_7g34141
malus_domestica	MD01G1237800.v1.1 MD01G1238300.v1.1
prunus_persica	Prupe.2G328200_v2.0.a1 Prupe.2G328200_v2.0.a1
pyrus_communis	pycom01g24550 pycom01g24570
rosa_chinensis	RchiOBHm_Chr1g0384501
rosa_laevigata	RLG00000026036
rosa_multiflora	Rmu_sc0006005.1_g000004
rosa_roxburghii	Rroxscaffold_4G00276650
rosa_rugosa	Rorug01G0448300
rosa_samantha	Rh1AG473500 Rh1BG431600 Rh1CG444700 Rh1DG464000
rosa_wichuraiana	Rw1G039910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	982
AccII	CGCG	2 cut(s)	166, 474
AciI	CCGC	5 cut(s)	164, 186, 1410, 1428, 2506
AclI	AACGTT	1 cut(s)	903
AclWI	GGATC	3 cut(s)	274, 688, 1167
AcoI	YGGCCR	3 cut(s)	88, 390, 1191
AcsI	RAATTY	7 cut(s)	136, 1098, 1357, 1613, 1726, 2075, 2336
AcuI	CTGAAG	5 cut(s)	329, 1277, 1833, 2103, 2546
AdeI	CACNNNGTG	1 cut(s)	947
AfiI	CCNNNNNNNGG	5 cut(s)	517, 811, 1513, 1939, 2138
AflII	CTTAAG	1 cut(s)	1235
AjnI	CCWGG	2 cut(s)	651, 1656
AjuI	GAANNNNNNNTTGG	2 cut(s)	1125, 1157
Alw21I	GWGCWC	1 cut(s)	2151
Alw26I	GTCTC	1 cut(s)	1429
AlwI	GGATC	3 cut(s)	274, 688, 1167
AlwNI	CAGNNNCTG	2 cut(s)	658, 1094
Ama87I	CYCGRG	1 cut(s)	1058
AoxI	GGCC	5 cut(s)	88, 390, 1191, 1629, 1851
ApeKI	GCWGC	5 cut(s)	56, 1456, 1720, 1946, 2316
ApoI	RAATTY	7 cut(s)	136, 1098, 1357, 1613, 1726, 2075, 2336
AseI	ATTAAT	2 cut(s)	869, 2193
Asp700I	GAANNNNTTC	1 cut(s)	2336
AspLEI	GCGC	3 cut(s)	168, 382, 476
AspS9I	GGNCC	2 cut(s)	2122, 2463
AsuC2I	CCSGG	1 cut(s)	92
AsuNHI	GCTAGC	1 cut(s)	776
AvaI	CYCGRG	1 cut(s)	1058
AvaII	GGWCC	2 cut(s)	2122, 2463
BaeGI	GKGCMC	1 cut(s)	2540
BalI	TGGCCA	1 cut(s)	1193
BbsI	GAAGAC	2 cut(s)	1153, 1509
Bbv12I	GWGCWC	1 cut(s)	2151
BbvCI	CCTCAGC	1 cut(s)	2205
BbvI	GCAGC	5 cut(s)	68, 1443, 1707, 1958, 2303
BccI	CCATC	4 cut(s)	787, 919, 1183, 2479
BcgI	CGANNNNNNTGC	4 cut(s)	122, 156, 680, 714
BciT130I	CCWGG	2 cut(s)	653, 1658
BcnI	CCSGG	1 cut(s)	92
BcoDI	GTCTC	1 cut(s)	1429
BfaI	CTAG	5 cut(s)	752, 777, 911, 1362, 1977
BfmI	CTRYAG	1 cut(s)	1995
BfrI	CTTAAG	1 cut(s)	1235
BfuAI	ACCTGC	1 cut(s)	982
BglI	GCCNNNNNGGC	2 cut(s)	398, 926
BglII	AGATCT	1 cut(s)	304
BisI	GCNGC	5 cut(s)	57, 1457, 1721, 1947, 2317
BlpI	GCTNAGC	2 cut(s)	1402, 1473
BlsI	GCNGC	5 cut(s)	58, 1458, 1722, 1948, 2318
Bme1390I	CCNGG	3 cut(s)	92, 653, 1658
Bme18I	GGWCC	2 cut(s)	2122, 2463
BmeT110I	CYCGRG	1 cut(s)	1058
BmgT120I	GGNCC	2 cut(s)	2122, 2463
BmiI	GGNNCC	1 cut(s)	557
BmrFI	CCNGG	3 cut(s)	92, 653, 1658
BmrI	ACTGGG	2 cut(s)	1645, 1774
BmsI	GCATC	9 cut(s)	56, 515, 631, 664, 745, 978, 1034, 1075, 1549
BmtI	GCTAGC	1 cut(s)	780
BmuI	ACTGGG	2 cut(s)	1645, 1774
BpiI	GAAGAC	2 cut(s)	1153, 1509
BpmI	CTGGAG	1 cut(s)	2366
Bpu10I	CCTNAGC	1 cut(s)	2205
Bpu1102I	GCTNAGC	2 cut(s)	1402, 1473
BpuEI	CTTGAG	4 cut(s)	212, 1184, 1205, 1499
BpuMI	CCSGG	1 cut(s)	92
BsaAI	YACGTR	1 cut(s)	944
BsaJI	CCNNGG	3 cut(s)	91, 444, 2013
Bsc4I	CCNNNNNNNGG	5 cut(s)	517, 811, 1513, 1939, 2138
Bse1I	ACTGG	5 cut(s)	1305, 1640, 1780, 1903, 1989
Bse3DI	GCAATG	1 cut(s)	1398
BseBI	CCWGG	2 cut(s)	653, 1658
BseDI	CCNNGG	3 cut(s)	91, 444, 2013
BseGI	GGATG	4 cut(s)	506, 577, 1301, 1372
BseLI	CCNNNNNNNGG	5 cut(s)	517, 811, 1513, 1939, 2138
BseMI	GCAATG	1 cut(s)	1398
BseMII	CTCAG	8 cut(s)	427, 611, 717, 749, 1185, 1233, 1464, 2196
BseNI	ACTGG	5 cut(s)	1305, 1640, 1780, 1903, 1989
BseRI	GAGGAG	4 cut(s)	971, 1277, 2115, 2159
BseSI	GKGCMC	1 cut(s)	2540
BseX3I	CGGCCG	1 cut(s)	88
BseXI	GCAGC	5 cut(s)	68, 1443, 1707, 1958, 2303
Bsh1236I	CGCG	2 cut(s)	166, 474
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	5 cut(s)	90, 392, 1193, 1631, 1853
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	1 cut(s)	2151
BsiHKCI	CYCGRG	1 cut(s)	1058
BsiSI	CCGG	1 cut(s)	91
BslI	CCNNNNNNNGG	5 cut(s)	517, 811, 1513, 1939, 2138
BsmAI	GTCTC	1 cut(s)	1429
BsnI	GGCC	5 cut(s)	90, 392, 1193, 1631, 1853
BsoBI	CYCGRG	1 cut(s)	1058
Bsp1286I	GDGCHC	2 cut(s)	2151, 2540
Bsp143I	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
Bsp1720I	GCTNAGC	2 cut(s)	1402, 1473
BspACI	CCGC	5 cut(s)	164, 186, 1410, 1428, 2506
BspANI	GGCC	5 cut(s)	90, 392, 1193, 1631, 1853
BspCNI	CTCAG	8 cut(s)	426, 610, 718, 748, 1184, 1234, 1465, 2197
BspFNI	CGCG	2 cut(s)	166, 474
BspHI	TCATGA	1 cut(s)	1047
BspLI	GGNNCC	1 cut(s)	557
BspMI	ACCTGC	1 cut(s)	982
BspOI	GCTAGC	1 cut(s)	780
BspPI	GGATC	3 cut(s)	274, 688, 1167
BspQI	GCTCTTC	1 cut(s)	1373
BspTI	CTTAAG	1 cut(s)	1235
BsrDI	GCAATG	1 cut(s)	1398
BsrI	ACTGG	5 cut(s)	1305, 1640, 1780, 1903, 1989
BssECI	CCNNGG	3 cut(s)	91, 444, 2013
BssMI	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
BssT1I	CCWWGG	1 cut(s)	2013
Bst2UI	CCWGG	2 cut(s)	653, 1658
Bst4CI	ACNGT	1 cut(s)	25
Bst6I	CTCTTC	9 cut(s)	516, 1320, 1368, 1373, 1637, 2079, 2100, 2166, 2370
BstAFI	CTTAAG	1 cut(s)	1235
BstAPI	GCANNNNNTGC	1 cut(s)	1729
BstBAI	YACGTR	1 cut(s)	944
BstEII	GGTNACC	1 cut(s)	201
BstF5I	GGATG	4 cut(s)	506, 577, 1301, 1372
BstFNI	CGCG	2 cut(s)	166, 474
BstHHI	GCGC	3 cut(s)	168, 382, 476
BstKTI	GATC	7 cut(s)	157, 213, 269, 307, 696, 1162, 1821
BstMAI	GTCTC	1 cut(s)	1429
BstMBI	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 165, 398, 428, 674, 731, 926, 1442, 1729
BstNI	CCWGG	2 cut(s)	653, 1658
BstNSI	RCATGY	2 cut(s)	566, 1552
BstPI	GGTNACC	1 cut(s)	201
BstSCI	CCNGG	3 cut(s)	90, 651, 1656
BstSFI	CTRYAG	1 cut(s)	1995
BstSLI	GKGCMC	1 cut(s)	2540
BstUI	CGCG	2 cut(s)	166, 474
BstV1I	GCAGC	5 cut(s)	68, 1443, 1707, 1958, 2303
BstV2I	GAAGAC	2 cut(s)	1153, 1509
BstX2I	RGATCY	3 cut(s)	304, 693, 1159
BstXI	CCANNNNNNTGG	1 cut(s)	709
BstYI	RGATCY	3 cut(s)	304, 693, 1159
BstZI	CGGCCG	1 cut(s)	88
BsuRI	GGCC	5 cut(s)	90, 392, 1193, 1631, 1853
BtsCI	GGATG	4 cut(s)	506, 577, 1301, 1372
BtsIMutI	CAGTG	2 cut(s)	656, 1910
BveI	ACCTGC	1 cut(s)	982
CaiI	CAGNNNCTG	2 cut(s)	658, 1094
CciI	TCATGA	1 cut(s)	1047
CfoI	GCGC	3 cut(s)	168, 382, 476
Cfr13I	GGNCC	2 cut(s)	2122, 2463
CseI	GACGC	1 cut(s)	185
DpnI	GATC	7 cut(s)	156, 212, 268, 306, 695, 1161, 1820
DpnII	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
DraIII	CACNNNGTG	1 cut(s)	947
EaeI	YGGCCR	3 cut(s)	88, 390, 1191
EagI	CGGCCG	1 cut(s)	88
Eam1104I	CTCTTC	9 cut(s)	516, 1320, 1368, 1373, 1637, 2079, 2100, 2166, 2370
EarI	CTCTTC	9 cut(s)	516, 1320, 1368, 1373, 1637, 2079, 2100, 2166, 2370
EciI	GGCGGA	1 cut(s)	1399
EclXI	CGGCCG	1 cut(s)	88
Eco130I	CCWWGG	1 cut(s)	2013
Eco47I	GGWCC	2 cut(s)	2122, 2463
Eco52I	CGGCCG	1 cut(s)	88
Eco57I	CTGAAG	5 cut(s)	329, 1277, 1833, 2103, 2546
Eco88I	CYCGRG	1 cut(s)	1058
Eco91I	GGTNACC	1 cut(s)	201
EcoO109I	RGGNCCY	1 cut(s)	2463
EcoO65I	GGTNACC	1 cut(s)	201
EcoRI	GAATTC	3 cut(s)	1613, 2075, 2336
EcoRII	CCWGG	2 cut(s)	651, 1656
EcoT14I	CCWWGG	1 cut(s)	2013
ErhI	CCWWGG	1 cut(s)	2013
FauI	CCCGC	2 cut(s)	171, 193
Fnu4HI	GCNGC	5 cut(s)	57, 1457, 1721, 1947, 2317
FokI	GGATG	4 cut(s)	493, 584, 1288, 1379
Fsp4HI	GCNGC	5 cut(s)	57, 1457, 1721, 1947, 2317
FspBI	CTAG	5 cut(s)	752, 777, 911, 1362, 1977
GlaI	GCGC	3 cut(s)	167, 381, 475
GluI	GCNGC	5 cut(s)	57, 1457, 1721, 1947, 2317
GsuI	CTGGAG	1 cut(s)	2366
HaeIII	GGCC	5 cut(s)	90, 392, 1193, 1631, 1853
HapII	CCGG	1 cut(s)	91
HgaI	GACGC	1 cut(s)	185
HhaI	GCGC	3 cut(s)	168, 382, 476
Hin6I	GCGC	3 cut(s)	166, 380, 474
HinP1I	GCGC	3 cut(s)	166, 380, 474
HindIII	AAGCTT	5 cut(s)	761, 1292, 1399, 1752, 2161
HpaII	CCGG	1 cut(s)	91
Hpy166II	GTNNAC	4 cut(s)	83, 579, 1915, 2452
Hpy188III	TCNNGA	8 cut(s)	299, 569, 599, 1048, 1163, 1184, 1519, 1916
Hpy8I	GTNNAC	4 cut(s)	83, 579, 1915, 2452
Hpy99I	CGWCG	1 cut(s)	201
HpyCH4III	ACNGT	1 cut(s)	25
HpyCH4IV	ACGT	2 cut(s)	903, 943
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 165, 398, 428, 674, 731, 926, 1442, 1729
HpySE526I	ACGT	2 cut(s)	903, 943
HspAI	GCGC	3 cut(s)	166, 380, 474
Kzo9I	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
LguI	GCTCTTC	1 cut(s)	1373
LmnI	GCTCC	4 cut(s)	164, 322, 487, 2146
Lsp1109I	GCAGC	5 cut(s)	68, 1443, 1707, 1958, 2303
LweI	GCATC	9 cut(s)	56, 515, 631, 664, 745, 978, 1034, 1075, 1549
MaeI	CTAG	5 cut(s)	752, 777, 911, 1362, 1977
MaeII	ACGT	2 cut(s)	903, 943
MaeIII	GTNAC	7 cut(s)	201, 854, 1484, 1582, 1589, 1980, 2431
MalI	GATC	7 cut(s)	156, 212, 268, 306, 695, 1161, 1820
MboI	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
MfeI	CAATTG	2 cut(s)	360, 1140
MflI	RGATCY	3 cut(s)	304, 693, 1159
MhlI	GDGCHC	2 cut(s)	2151, 2540
MlsI	TGGCCA	1 cut(s)	1193
MluNI	TGGCCA	1 cut(s)	1193
MlyI	GAGTC	6 cut(s)	655, 1040, 1163, 1238, 1801, 2396
MmeI	TCCRAC	3 cut(s)	465, 993, 1332
Mox20I	TGGCCA	1 cut(s)	1193
MroXI	GAANNNNTTC	1 cut(s)	2336
MscI	TGGCCA	1 cut(s)	1193
MseI	TTAA	9 cut(s)	740, 807, 869, 1110, 1236, 1280, 1868, 1956, 2193
MslI	CAYNNNNRTG	1 cut(s)	669
Msp20I	TGGCCA	1 cut(s)	1193
MspCI	CTTAAG	1 cut(s)	1235
MspI	CCGG	1 cut(s)	91
MspR9I	CCNGG	3 cut(s)	92, 653, 1658
MunI	CAATTG	2 cut(s)	360, 1140
MvaI	CCWGG	2 cut(s)	653, 1658
MvnI	CGCG	2 cut(s)	166, 474
MwoI	GCNNNNNNNGC	9 cut(s)	53, 165, 398, 428, 674, 731, 926, 1442, 1729
NciI	CCSGG	1 cut(s)	92
NdeII	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
NheI	GCTAGC	1 cut(s)	776
NlaIV	GGNNCC	1 cut(s)	557
NmeAIII	GCCGAG	4 cut(s)	66, 469, 715, 1879
NmuCI	GTSAC	1 cut(s)	201
NspI	RCATGY	2 cut(s)	566, 1552
PaeI	GCATGC	1 cut(s)	1552
PaeR7I	CTCGAG	1 cut(s)	1058
PagI	TCATGA	1 cut(s)	1047
PciSI	GCTCTTC	1 cut(s)	1373
PcsI	WCGNNNNNNNCGW	1 cut(s)	1629
PdmI	GAANNNNTTC	1 cut(s)	2336
PkrI	GCNGC	5 cut(s)	58, 1458, 1722, 1948, 2318
PleI	GAGTC	6 cut(s)	655, 1039, 1163, 1237, 1800, 2395
PpsI	GAGTC	6 cut(s)	655, 1039, 1163, 1237, 1800, 2395
Ppu21I	YACGTR	1 cut(s)	944
PpuMI	RGGWCCY	1 cut(s)	2463
PshBI	ATTAAT	2 cut(s)	869, 2193
Psp1406I	AACGTT	1 cut(s)	903
Psp5II	RGGWCCY	1 cut(s)	2463
Psp6I	CCWGG	2 cut(s)	651, 1656
PspEI	GGTNACC	1 cut(s)	201
PspGI	CCWGG	2 cut(s)	651, 1656
PspN4I	GGNNCC	1 cut(s)	557
PspPI	GGNCC	2 cut(s)	2122, 2463
PspPPI	RGGWCCY	1 cut(s)	2463
PspXI	VCTCGAGB	1 cut(s)	1058
PstNI	CAGNNNCTG	2 cut(s)	658, 1094
PsuI	RGATCY	3 cut(s)	304, 693, 1159
RseI	CAYNNNNRTG	1 cut(s)	669
SapI	GCTCTTC	1 cut(s)	1373
SaqAI	TTAA	9 cut(s)	740, 807, 869, 1110, 1236, 1280, 1868, 1956, 2193
SatI	GCNGC	5 cut(s)	57, 1457, 1721, 1947, 2317
Sau3AI	GATC	7 cut(s)	154, 210, 266, 304, 693, 1159, 1818
Sau96I	GGNCC	2 cut(s)	2122, 2463
SchI	GAGTC	6 cut(s)	655, 1040, 1163, 1238, 1801, 2396
ScrFI	CCNGG	3 cut(s)	92, 653, 1658
SduI	GDGCHC	2 cut(s)	2151, 2540
SfaNI	GCATC	9 cut(s)	56, 515, 631, 664, 745, 978, 1034, 1075, 1549
SfcI	CTRYAG	1 cut(s)	1995
Sfr274I	CTCGAG	1 cut(s)	1058
SinI	GGWCC	2 cut(s)	2122, 2463
SlaI	CTCGAG	1 cut(s)	1058
SmiMI	CAYNNNNRTG	1 cut(s)	669
SmlI	CTYRAG	6 cut(s)	191, 1058, 1163, 1184, 1235, 1478
SmoI	CTYRAG	6 cut(s)	191, 1058, 1163, 1184, 1235, 1478
SphI	GCATGC	1 cut(s)	1552
SsiI	CCGC	5 cut(s)	164, 186, 1410, 1428, 2506
SspMI	CTAG	5 cut(s)	752, 777, 911, 1362, 1977
StyD4I	CCNGG	3 cut(s)	90, 651, 1656
StyI	CCWWGG	1 cut(s)	2013
TaaI	ACNGT	1 cut(s)	25
TaiI	ACGT	2 cut(s)	906, 946
TaqI	TCGA	3 cut(s)	73, 501, 1059
TaqII	GACCGA	1 cut(s)	189
Tru1I	TTAA	9 cut(s)	740, 807, 869, 1110, 1236, 1280, 1868, 1956, 2193
Tru9I	TTAA	9 cut(s)	740, 807, 869, 1110, 1236, 1280, 1868, 1956, 2193
TscAI	CASTG	2 cut(s)	663, 1910
TseFI	GTSAC	1 cut(s)	201
TseI	GCWGC	5 cut(s)	56, 1456, 1720, 1946, 2316
Tsp45I	GTSAC	1 cut(s)	201
TspDTI	ATGAA	9 cut(s)	1064, 1224, 1383, 1434, 1557, 1761, 1877, 1941, 2295
TspGWI	ACGGA	1 cut(s)	2456
TspRI	CASTG	2 cut(s)	663, 1910
Vha464I	CTTAAG	1 cut(s)	1235
VpaK11BI	GGWCC	2 cut(s)	2122, 2463
VspI	ATTAAT	2 cut(s)	869, 2193
XapI	RAATTY	7 cut(s)	136, 1098, 1357, 1613, 1726, 2075, 2336
XceI	RCATGY	2 cut(s)	566, 1552
XhoI	CTCGAG	1 cut(s)	1058
XmnI	GAANNNNTTC	1 cut(s)	2336
XspI	CTAG	5 cut(s)	752, 777, 911, 1362, 1977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.