Rh1AG473500

WEB family protein At5g16730, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
68484609 .. 68489378
4770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG473500.1

Sequence Viewer

Length: 1926 bp
ATGACCTGTGATGCAAAAAACCAGGCACTGAGCCATGCTGATGATGCAACTAAGATTGCTGAGATTCATGCCGAGAAGGTGGAGATTCTCTCGGCTGAGTTGACCCGGTTGAAGGGCTTACTAGAATCGAAGCAGGAATCAGAGACTAGCGAACATAGCAAGATGGTGCTTCAGCTTGAATCAGAGGTAGAATCTCTCAAGCTGCAACTTGAGAAAGCAAAAGGTTACGAGGAGAGATTGATGGAGAAAGAGACTTCCATTGAACAGCTTAACGTTGAGCTTGAGTCAGCCAAGATGGCTGAATCTTATGCTCACAGTATTGTTGAGGAGTGGAAAATTAGGGTTGAGGAATTAGAGATGCAGGTTGAGGAAGCAAATAAGGCAGAGAAATCTGCATCAGAATCTTTAGATTCAGTCATGAAACAACTAGAGGGAAACCATGACTTATTGCACGATGCAGAATCTGAAATTGCTGCTCTTAAAGAGAAGGTGAGTTTGCTGGAAATGACAATTGTAAGACATAGAGGAGATCTTGAGGAATCAGAACGCTGTCTTGGTACGACCAAGGAAGAAAATCAGAAAATGACAAAAATGGTTGAGTCACTTAAGTCTGAGCTCGAAACTGTGAAGGAGGAGAAATTGCAGGCTTTAAGCAATGAGAAGCTTGCAGCATCAAGTGTTCAAAGCCTGTTAGAAGAAAAAAACAAACTCATAAATGAGTTGGAACATTCCAGGGATGAAGAAGAGAAGAGCAAAAAAGCAATGGAAAGCTTAGCTTCTGCCCTACATGAAGTGTCCACAGAAGCTAGAGAAGCAAAAGAAAAGCTGCTAACCAATCAAGCGGAGCACGATAGTTATGAGTTGCAGATAGAAGACCTTAAAATGGTCTTGAAAGCAACCAATGAAAAGCATGAAGCCATAATTGATGATGCAAAACATGAAATTCATCTTCTTACAAGTAATGTAGAACAATGCAAGACTGAGTTACAACATGCGAAGGCTGACTGGGAGCAAAAAGAACTTCACCTGGTGAATTCTGTAAAGCATTCAGAAGAAGAAAACTCTTCTATGGAAAAAGAAATAAACAGGCTGCTAAATTTGCTCAAAAGCACCGAGGAAGAAGCTTGTGCTATGAAGGAAGAAGAAGCGCAGTTGAAAGATAGCATGAAGGAAGTTGAATCTGAGGTTATCTGTTTGCAAGAAGCTCTTGCAGAAGCAAAGGCTGAGAACATGAAACTAAAGGAAAGCATATTGGACAAAGAAAATGAGTTCCAGAGTGTTATACATGAAAATGAGGAGCTCCAGAACAGGGAGGCTGCTTCTCATAAGAAGGTGGAGGAATTGTCAAAGCTACTTGAAGAAGCTGTGGCCAAGAAGCAAGCCGAGGAAAATGGTGAGCTAACAGACAGTGAGAAGGACTATGATTTGCTTCCTAAGGTAGTCGAATTCTCTGAAGAGAATGGGCATGGAAGAGAAGAGAAACTCAAAGTGGAGCTTCCACCACTTCAAAGTGTGGAACCGAAGAGTGAAAATTTATGCCAAGAGAATAATGTCTCGAATGGCAAGGCTGAACATGTGGATTCTGCTCAAATCGACACTCTGAATGGGAAACCGAAAGGTGATGAAAGCAAAGAGAAAGAAGATGACTCCGTAGAAGTTGAATATAAAATGTGGGAGAGCTGCAAGATTGAAAAGAAGGAATTTTCGCCAGAGAGAGAACAGGAGCAGGAATCCTTCGAAGAGGAAGTGAACTCAAAGGGGGATGGTGGTGAGAAATTGGATCAAATAAATGGATTAACTTCAACTGAAAGTGTTGATGACAGTGCAACTTCTCCATCAAAGCAGCAACAACAGAAGAAGAAGAAGCCTTTACTCCGCAAATTTGGAAGCCTTCTCAAGAAGAAGGGCACTAGCAACAACAAGTAG

Protein Analysis

641

Amino Acids

72.81

Weight (kDa)

4.81

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 352
AciI CCGC 2 cut(s) 842, 1876
AclI AACGTT 1 cut(s) 273
AclWI GGATC 1 cut(s) 1788
AcoI YGGCCR 1 cut(s) 1368
AcsI RAATTY 7 cut(s) 942, 1033, 1096, 1445, 1531, 1700, 1880
AcuI CTGAAG 2 cut(s) 155, 1473
AdeI CACNNNGTG 1 cut(s) 1030
AfaI GTAC 1 cut(s) 559
AfiI CCNNNNNNNGG 3 cut(s) 112, 883, 1309
AflII CTTAAG 1 cut(s) 605
AflIII ACRYGT 1 cut(s) 1573
AjnI CCWGG 3 cut(s) 21, 731, 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 537, 569
Alw21I GWGCWC 3 cut(s) 618, 849, 1302
Alw26I GTCTC 3 cut(s) 137, 245, 1558
AlwI GGATC 1 cut(s) 1788
AlwNI CAGNNNCTG 2 cut(s) 28, 464
AoxI GGCC 1 cut(s) 1368
ApeKI GCWGC 8 cut(s) 202, 473, 668, 826, 1090, 1316, 1680, 1843
ApoI RAATTY 7 cut(s) 942, 1033, 1096, 1445, 1531, 1700, 1880
AspLEI GCGC 1 cut(s) 1150
AsuC2I CCSGG 1 cut(s) 106
AsuHPI GGTGA 6 cut(s) 502, 1016, 1042, 1406, 1631, 1781
AsuII TTCGAA 1 cut(s) 1737
AxyI CCTNAGG 1 cut(s) 1434
BaeGI GKGCMC 1 cut(s) 1910
BalI TGGCCA 1 cut(s) 1370
BanII GRGCYC 2 cut(s) 618, 1302
BbsI GAAGAC 1 cut(s) 879
Bbv12I GWGCWC 3 cut(s) 618, 849, 1302
BbvI GCAGC 8 cut(s) 189, 460, 680, 813, 1077, 1303, 1667, 1855
BccI CCATC 5 cut(s) 157, 235, 289, 1757, 1843
BciT130I CCWGG 3 cut(s) 23, 733, 1028
BcnI CCSGG 1 cut(s) 106
BcoDI GTCTC 3 cut(s) 137, 245, 1558
BfaI CTAG 5 cut(s) 122, 147, 428, 807, 1911
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 352
BglI GCCNNNNNGGC 1 cut(s) 296
BglII AGATCT 1 cut(s) 529
BisI GCNGC 8 cut(s) 203, 474, 669, 827, 1091, 1317, 1681, 1844
BlpI GCTNAGC 1 cut(s) 772
BlsI GCNGC 8 cut(s) 204, 475, 670, 828, 1092, 1318, 1682, 1845
Bme1390I CCNGG 4 cut(s) 23, 106, 733, 1028
BmiI GGNNCC 1 cut(s) 1518
BmrFI CCNGG 4 cut(s) 23, 106, 733, 1028
BmrI ACTGGG 1 cut(s) 1015
BmsI GCATC 6 cut(s) 34, 348, 404, 445, 680, 919
BmuI ACTGGG 1 cut(s) 1015
BpiI GAAGAC 1 cut(s) 879
BplI GAGNNNNNCTC 2 cut(s) 74, 106
BpmI CTGGAG 1 cut(s) 1286
Bpu1102I GCTNAGC 1 cut(s) 772
Bpu14I TTCGAA 1 cut(s) 1737
BpuEI CTTGAG 5 cut(s) 182, 230, 302, 554, 1880
BpuMI CCSGG 1 cut(s) 106
BsaJI CCNNGG 4 cut(s) 564, 732, 1113, 1383
BsaXI ACNNNNNCTCC 2 cut(s) 1328, 1358
Bsc4I CCNNNNNNNGG 3 cut(s) 112, 883, 1309
Bse1I ACTGG 1 cut(s) 1010
Bse21I CCTNAGG 1 cut(s) 1434
Bse3DI GCAATG 2 cut(s) 661, 768
BseBI CCWGG 3 cut(s) 23, 733, 1028
BseDI CCNNGG 4 cut(s) 564, 732, 1113, 1383
BseGI GGATG 2 cut(s) 742, 1768
BseLI CCNNNNNNNGG 3 cut(s) 112, 883, 1309
BseMI GCAATG 2 cut(s) 661, 768
BseMII CTCAG 7 cut(s) 20, 51, 87, 603, 972, 1173, 1215
BseNI ACTGG 1 cut(s) 1010
BseRI GAGGAG 5 cut(s) 245, 341, 540, 647, 1310
BseSI GKGCMC 1 cut(s) 1910
BseXI GCAGC 8 cut(s) 189, 460, 680, 813, 1077, 1303, 1667, 1855
BshFI GGCC 1 cut(s) 1370
BsiHKAI GWGCWC 3 cut(s) 618, 849, 1302
BsiSI CCGG 1 cut(s) 106
BslI CCNNNNNNNGG 3 cut(s) 112, 883, 1309
BsmAI GTCTC 3 cut(s) 137, 245, 1558
BsmI GAATGC 1 cut(s) 1045
BsnI GGCC 1 cut(s) 1370
Bsp119I TTCGAA 1 cut(s) 1737
Bsp1286I GDGCHC 4 cut(s) 618, 849, 1302, 1910
Bsp143I GATC 2 cut(s) 529, 1780
Bsp1720I GCTNAGC 1 cut(s) 772
BspACI CCGC 2 cut(s) 842, 1876
BspANI GGCC 1 cut(s) 1370
BspCNI CTCAG 7 cut(s) 21, 52, 88, 604, 973, 1174, 1216
BspHI TCATGA 1 cut(s) 417
BspLI GGNNCC 1 cut(s) 1518
BspMI ACCTGC 1 cut(s) 352
BspPI GGATC 1 cut(s) 1788
BspQI GCTCTTC 1 cut(s) 743
BspT104I TTCGAA 1 cut(s) 1737
BspTI CTTAAG 1 cut(s) 605
BsrDI GCAATG 2 cut(s) 661, 768
BsrI ACTGG 1 cut(s) 1010
BssECI CCNNGG 4 cut(s) 564, 732, 1113, 1383
BssMI GATC 2 cut(s) 529, 1780
BssT1I CCWWGG 1 cut(s) 564
Bst2UI CCWGG 3 cut(s) 23, 733, 1028
Bst4CI ACNGT 4 cut(s) 317, 625, 1409, 1823
Bst6I CTCTTC 8 cut(s) 738, 743, 1069, 1449, 1465, 1470, 1517, 1734
BstAFI CTTAAG 1 cut(s) 605
BstBI TTCGAA 1 cut(s) 1737
BstC8I GCNNGC 3 cut(s) 645, 666, 1380
BstF5I GGATG 2 cut(s) 742, 1768
BstHHI GCGC 1 cut(s) 1150
BstKTI GATC 2 cut(s) 532, 1783
BstMAI GTCTC 3 cut(s) 137, 245, 1558
BstMBI GATC 2 cut(s) 529, 1780
BstMWI GCNNNNNNNGC 6 cut(s) 44, 156, 296, 380, 812, 1099
BstNI CCWGG 3 cut(s) 23, 733, 1028
BstNSI RCATGY 2 cut(s) 995, 1577
BstSCI CCNGG 4 cut(s) 21, 104, 731, 1026
BstSLI GKGCMC 1 cut(s) 1910
BstV1I GCAGC 8 cut(s) 189, 460, 680, 813, 1077, 1303, 1667, 1855
BstV2I GAAGAC 1 cut(s) 879
BstX2I RGATCY 1 cut(s) 529
BstYI RGATCY 1 cut(s) 529
Bsu36I CCTNAGG 1 cut(s) 1434
BsuRI GGCC 1 cut(s) 1370
BtsCI GGATG 2 cut(s) 742, 1768
BtsIMutI CAGTG 3 cut(s) 26, 1414, 1828
BveI ACCTGC 1 cut(s) 352
Cac8I GCNNGC 3 cut(s) 645, 666, 1380
CaiI CAGNNNCTG 2 cut(s) 28, 464
CciI TCATGA 1 cut(s) 417
CfoI GCGC 1 cut(s) 1150
CsiI ACCWGGT 1 cut(s) 1026
Csp6I GTAC 1 cut(s) 558
CviQI GTAC 1 cut(s) 558
DpnI GATC 2 cut(s) 531, 1782
DpnII GATC 2 cut(s) 529, 1780
DraIII CACNNNGTG 1 cut(s) 1030
EaeI YGGCCR 1 cut(s) 1368
Eam1104I CTCTTC 8 cut(s) 738, 743, 1069, 1449, 1465, 1470, 1517, 1734
EarI CTCTTC 8 cut(s) 738, 743, 1069, 1449, 1465, 1470, 1517, 1734
Ecl136II GAGCTC 2 cut(s) 616, 1300
Eco130I CCWWGG 1 cut(s) 564
Eco24I GRGCYC 2 cut(s) 618, 1302
Eco53kI GAGCTC 2 cut(s) 616, 1300
Eco57I CTGAAG 2 cut(s) 155, 1473
Eco81I CCTNAGG 1 cut(s) 1434
EcoICRI GAGCTC 2 cut(s) 616, 1300
EcoRI GAATTC 2 cut(s) 1033, 1445
EcoRII CCWGG 3 cut(s) 21, 731, 1026
EcoT14I CCWWGG 1 cut(s) 564
EcoT38I GRGCYC 2 cut(s) 618, 1302
ErhI CCWWGG 1 cut(s) 564
FalI AAGNNNNNCTT 6 cut(s) 760, 792, 1191, 1223, 1479, 1511
Fnu4HI GCNGC 8 cut(s) 203, 474, 669, 827, 1091, 1317, 1681, 1844
FokI GGATG 2 cut(s) 749, 1775
FriOI GRGCYC 2 cut(s) 618, 1302
Fsp4HI GCNGC 8 cut(s) 203, 474, 669, 827, 1091, 1317, 1681, 1844
FspBI CTAG 5 cut(s) 122, 147, 428, 807, 1911
GlaI GCGC 1 cut(s) 1149
GluI GCNGC 8 cut(s) 203, 474, 669, 827, 1091, 1317, 1681, 1844
GsuI CTGGAG 1 cut(s) 1286
HaeIII GGCC 1 cut(s) 1370
HapII CCGG 1 cut(s) 106
HhaI GCGC 1 cut(s) 1150
Hin6I GCGC 1 cut(s) 1148
HinP1I GCGC 1 cut(s) 1148
HincII GTYRAC 1 cut(s) 102
HindII GTYRAC 1 cut(s) 102
HindIII AAGCTT 3 cut(s) 662, 769, 1122
HpaII CCGG 1 cut(s) 106
HphI GGTGA 6 cut(s) 502, 1016, 1042, 1406, 1631, 1781
Hpy166II GTNNAC 3 cut(s) 102, 798, 1750
Hpy188III TCNNGA 7 cut(s) 418, 533, 889, 1273, 1303, 1555, 1897
Hpy8I GTNNAC 3 cut(s) 102, 798, 1750
HpyCH4III ACNGT 4 cut(s) 317, 625, 1409, 1823
HpyCH4IV ACGT 1 cut(s) 273
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 156, 296, 380, 812, 1099
HpySE526I ACGT 1 cut(s) 273
HspAI GCGC 1 cut(s) 1148
Kzo9I GATC 2 cut(s) 529, 1780
LguI GCTCTTC 1 cut(s) 743
LmnI GCTCC 6 cut(s) 844, 1009, 1297, 1305, 1492, 1723
Lsp1109I GCAGC 8 cut(s) 189, 460, 680, 813, 1077, 1303, 1667, 1855
LweI GCATC 6 cut(s) 34, 348, 404, 445, 680, 919
MabI ACCWGGT 1 cut(s) 1026
MaeI CTAG 5 cut(s) 122, 147, 428, 807, 1911
MaeII ACGT 1 cut(s) 273
MaeIII GTNAC 3 cut(s) 224, 600, 984
MalI GATC 2 cut(s) 531, 1782
MboI GATC 2 cut(s) 529, 1780
MfeI CAATTG 1 cut(s) 510
MflI RGATCY 1 cut(s) 529
MhlI GDGCHC 4 cut(s) 618, 849, 1302, 1910
MlsI TGGCCA 1 cut(s) 1370
MluNI TGGCCA 1 cut(s) 1370
MlyI GAGTC 3 cut(s) 293, 608, 1640
MmeI TCCRAC 1 cut(s) 702
Mox20I TGGCCA 1 cut(s) 1370
MscI TGGCCA 1 cut(s) 1370
MseI TTAA 6 cut(s) 270, 480, 606, 650, 879, 1796
MslI CAYNNNNRTG 2 cut(s) 39, 1290
Msp20I TGGCCA 1 cut(s) 1370
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 1 cut(s) 106
MspR9I CCNGG 4 cut(s) 23, 106, 733, 1028
MunI CAATTG 1 cut(s) 510
Mva1269I GAATGC 1 cut(s) 1045
MvaI CCWGG 3 cut(s) 23, 733, 1028
MwoI GCNNNNNNNGC 6 cut(s) 44, 156, 296, 380, 812, 1099
NciI CCSGG 1 cut(s) 106
NdeII GATC 2 cut(s) 529, 1780
NlaIV GGNNCC 1 cut(s) 1518
NmeAIII GCCGAG 3 cut(s) 71, 97, 1408
NmuCI GTSAC 1 cut(s) 600
NspI RCATGY 2 cut(s) 995, 1577
NspV TTCGAA 1 cut(s) 1737
PagI TCATGA 1 cut(s) 417
PciI ACATGT 1 cut(s) 1573
PciSI GCTCTTC 1 cut(s) 743
PctI GAATGC 1 cut(s) 1045
PkrI GCNGC 8 cut(s) 204, 475, 670, 828, 1092, 1318, 1682, 1845
PleI GAGTC 3 cut(s) 292, 607, 1640
PpsI GAGTC 3 cut(s) 292, 607, 1640
PscI ACATGT 1 cut(s) 1573
Psp124BI GAGCTC 2 cut(s) 618, 1302
Psp1406I AACGTT 1 cut(s) 273
Psp6I CCWGG 3 cut(s) 21, 731, 1026
PspGI CCWGG 3 cut(s) 21, 731, 1026
PspN4I GGNNCC 1 cut(s) 1518
PstNI CAGNNNCTG 2 cut(s) 28, 464
PsuI RGATCY 1 cut(s) 529
RsaI GTAC 1 cut(s) 559
RsaNI GTAC 1 cut(s) 558
RseI CAYNNNNRTG 2 cut(s) 39, 1290
SacI GAGCTC 2 cut(s) 618, 1302
SapI GCTCTTC 1 cut(s) 743
SaqAI TTAA 6 cut(s) 270, 480, 606, 650, 879, 1796
SatI GCNGC 8 cut(s) 203, 474, 669, 827, 1091, 1317, 1681, 1844
Sau3AI GATC 2 cut(s) 529, 1780
SchI GAGTC 3 cut(s) 293, 608, 1640
ScrFI CCNGG 4 cut(s) 23, 106, 733, 1028
SduI GDGCHC 4 cut(s) 618, 849, 1302, 1910
SexAI ACCWGGT 1 cut(s) 1026
SfaNI GCATC 6 cut(s) 34, 348, 404, 445, 680, 919
SfuI TTCGAA 1 cut(s) 1737
SmiMI CAYNNNNRTG 2 cut(s) 39, 1290
SmlI CTYRAG 6 cut(s) 197, 209, 281, 533, 605, 1895
SmoI CTYRAG 6 cut(s) 197, 209, 281, 533, 605, 1895
SsiI CCGC 2 cut(s) 842, 1876
SspMI CTAG 5 cut(s) 122, 147, 428, 807, 1911
SstI GAGCTC 2 cut(s) 618, 1302
StyD4I CCNGG 4 cut(s) 21, 104, 731, 1026
StyI CCWWGG 1 cut(s) 564
TaaI ACNGT 4 cut(s) 317, 625, 1409, 1823
TaiI ACGT 1 cut(s) 276
TaqI TCGA 6 cut(s) 128, 618, 1443, 1556, 1593, 1737
Tru1I TTAA 6 cut(s) 270, 480, 606, 650, 879, 1796
Tru9I TTAA 6 cut(s) 270, 480, 606, 650, 879, 1796
TscAI CASTG 3 cut(s) 33, 1414, 1828
TseFI GTSAC 1 cut(s) 600
TseI GCWGC 8 cut(s) 202, 473, 668, 826, 1090, 1316, 1680, 1843
Tsp45I GTSAC 1 cut(s) 600
TspGWI ACGGA 1 cut(s) 1639
TspRI CASTG 3 cut(s) 33, 1414, 1828
Vha464I CTTAAG 1 cut(s) 605
XapI RAATTY 7 cut(s) 942, 1033, 1096, 1445, 1531, 1700, 1880
XceI RCATGY 2 cut(s) 995, 1577
XspI CTAG 5 cut(s) 122, 147, 428, 807, 1911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.