Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0009532

Physical Location & Seq

Genomic Coordinates Reverse (-)

69642460 .. 69645835

Gene Structure 3376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG444700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGTCTTCCAAGTCCAAATCTAGTGTATCTGAAACTCCTAAAAAGGCAGCATCTGAAATTCCTAAGAAAGCAGCATCTGAAACTCCTAAGAAAGCATCACCAGCAACCCCGCGAGTGAGTAAACTGAGCAGGGCAGCGGGAGCAGCTGCTAAATCAGAATCGGATTCAGCAGCATCTCCTTCTCCTTTGCAGAATTCTCGCCTTTCAATTGATCGGTCCCCGCGCCCTGTCAACTCCCCCAAGCCAACAACAATTGAGCGTCGATCACCCAAGATCACTACCCCGCCGCCAGCTGAAAAACAACCCACAGGGGGCACTAAGGGATCAGAATTACAGGCTCAGTTGAGTCTTGTTCAGGAAGATCTAAAGAAAGCAAAGGAGCAGATAGATTTGATTGAAAAAGAGAAGGCAAAAGCAATCGATGATTTGAAAGAAGCACAGAGAGTGTCTGAGGAGGCAAATGAGAAGCTCAGAGAGGCGTTGGTGGCTCAAAAGCGAGCCCAAGAGGATTCAGAAATCGAGAAGTTTCGTGCTGTTGAGTTGGAACAGGCAGGAATTGAAGCAGCCCAGAAGAAGGAAGGTGAATGGGAGAAAGAGCTTGAAGCTGTTAGGAATCAGCATGCGCTGGATGTGGCTACTCTACTCTCTACTACTCAAGAACTTCAAAAGCTGAAGCAAGAACTGACCATGACCTGTGATGCAAAAAACCAGGCACTGAGCCATGCTGATGATGCAACTAAGATTGCTGAGATTCATGCCGAGAAGGTGGAGATTCTCTCGGCTGAGTTGACCCGGTTGAGGGGCTTACTAGAATCAAAGCAGGAATCAGAGACTAGCGAACATAGCAAGATGGTGCTTCAGCTTGAATCAGAGGTAGAATCTCTCAAGCAGCAACTTGAGAAAGCAAAAGGTTACGAGGAGAGATTGATGGAGAAAGAGACTTCCATTGAACAGCTTAACGTTGAGCTTGAGGCAGCCAAGATGGCTGAATCTTATGCTCACAGTATTGTTGAGGAGTGGAAAATTAGGGTTGAGGAATTAGAGATGCAGGTTGAGGAAGCAAATAAGGCAGAGAAATCTGCATCAGAATCTTTAGATTCAGTCATGAAACAACTAGAGGGAAACCATGACTTATTGCACGATGCAGAATCTGAAATTGCTGCTCTTAAAGAGAAGGTGAGTTTGCTGGAAATGACAATTGTAAGACATAGAGGAGATCTTGAGGAATCAGAACGCTGTCTTGGTACGACCAAGGAAGAAAATCAGAAAATGACAAAAATGGTTGAGTCACTTAAGTCTGAGCTCGAAACTGTGAAGGAGGAGAAATTGCAGGCTTTAAGCAATGAGAAGCTTGCAGCATCAAGTGTTCAAAGCCTGTTAGAAGAAAAAAACAAACTCATAAATGAGTTGGAACATTCCAGGGATGAAGAAGAGAAGAGCAAAAAAGCAATGGAAAGCTTAGCTTCTGCCCTACATGAAGTCTCCACAGAAGCTAGAGAAGCAAAAGAAAAGCTGCTAACCAATCAAGCGGAGCACGATAGTTATGAGTTGCAGATAGAAGACCTTAAAATGGCCTTGAAAGCAACCAATGAAAAGCATGAAGCCATAATTGATGATGCAAAACATGAAATTCATCTTCTTACAAGTAATGTAGAACAATGCAAGAATGAGTTACAACATGCGAAGGCTGACTGGGAGCAAAAAGAACTTCACCTGGTGAATTCTGTAAAGCATTCAGAAGAAGAAAACTCTTCTATGGAAAAAGAAATAAACAGGCTGCTAAATTTGCTCAAAAGCACCGAGGAAGAAGCTTGTGCTATGAAGGAAGAAGAAGCGCAGTTGAAAGATAGCATGAAGGAAGTTGAATCTGAGGTTATCTGTTTGCAGGAAGCTCTTGCAGAAGCAAAGGCTGAGAACATGAAACTAAAGGAAAGCATATTGGACAAAGAAAATGAGTTCCAGAGTGTTATACATGAAAATGAGGAGCTCCAGAACAGGGAGGCTGCTTCTCATAAGAAGGTGGAGGAATTGTCAAAGCTACTTGAAGAAGCTGTGGCCAAGAAGCAAGCCGAAGAAAATGGTGAGCTAACAGACAGTGAGAAGGACTATGATTTGCTTCCTAAGGTAGTCGAATTCTCTGAAGAGAATGGGCATGGAAGAGAAGAGAAACTCAAAGTGGAGCTTCCACCACCTCAAAGTGTGGAACCGAAGAGTGAAAATTTATGCCAAGAGAATAATGTCTCGAATGGCAAGGCTGAACATGTGGATTCTGCTCAAATTGATACTCTGAATGGGAAACCGAAAGGTGATGAAAGCAAAGAGAAAGAAGATGACTCCGTAGAAGTTGAATATAAAATGTGGGAGAGCTGCAATATTGAAAAGAAGGAATTTTCGCCAGAGAGAGAACAGGAGCAGGAATCCTTCGAAGAGGAAGTGGACTCAAAGGGGGATGGCGGTGAGAAATTGGATCAAATAAATGGATTAACTTCAACTGAAAGTGTTGATGACAGTGCAACTTCTCCATCAAAGCAGCAACAACAGAAGAAGAAGAAGCCTTTACTCCGCAAATTTGGAAGCCTTCTCAAGAAGAAGGGCACTAGCAACAACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000795 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005856 GO:0005875 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009987 GO:0015630 GO:0016043 GO:0022402 GO:0022414 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048285 GO:0051321 GO:0061982 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0099086 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

870

Amino Acids

97.7

Weight (kDa)

4.97

Isoelectric Point (pI)

57.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	110 - 530	8.8e-17	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009532)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02930 AT3G02930 AT3G02930 AT5G16730
fragaria_vesca	FvH4_7g34141 FvH4_7g34141
malus_domestica	MD01G1237800.v1.1 MD01G1238300.v1.1
prunus_persica	Prupe.2G328200_v2.0.a1 Prupe.2G328200_v2.0.a1
pyrus_communis	pycom01g24550 pycom01g24570
rosa_chinensis	RchiOBHm_Chr1g0384501
rosa_laevigata	RLG00000026036
rosa_multiflora	Rmu_sc0006005.1_g000004
rosa_roxburghii	Rroxscaffold_4G00276650
rosa_rugosa	Rorug01G0448300
rosa_samantha	Rh1AG473500 Rh1BG431600 Rh1CG444700 Rh1DG464000
rosa_wichuraiana	Rw1G039910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1039
AccII	CGCG	2 cut(s)	112, 223
AciI	CCGC	8 cut(s)	110, 137, 221, 284, 287, 1529, 2454, 2563
AclI	AACGTT	1 cut(s)	960
AclWI	GGATC	2 cut(s)	331, 2475
AcoI	YGGCCR	1 cut(s)	2055
AcsI	RAATTY	9 cut(s)	57, 193, 1629, 1720, 1783, 2132, 2218, 2387, 2567
AcuI	CTGAAG	3 cut(s)	692, 842, 2160
AdeI	CACNNNGTG	1 cut(s)	1717
AfaI	GTAC	1 cut(s)	1246
AfiI	CCNNNNNNNGG	6 cut(s)	311, 574, 798, 799, 1570, 1996
AflII	CTTAAG	1 cut(s)	1292
AflIII	ACRYGT	1 cut(s)	2260
AjnI	CCWGG	3 cut(s)	708, 1418, 1713
AjuI	GAANNNNNNNTTGG	2 cut(s)	1224, 1256
Alw21I	GWGCWC	3 cut(s)	1305, 1536, 1989
Alw26I	GTCTC	4 cut(s)	824, 932, 1486, 2245
AlwI	GGATC	2 cut(s)	331, 2475
AlwNI	CAGNNNCTG	4 cut(s)	53, 77, 715, 1151
AoxI	GGCC	2 cut(s)	1572, 2055
ApoI	RAATTY	9 cut(s)	57, 193, 1629, 1720, 1783, 2132, 2218, 2387, 2567
AspLEI	GCGC	3 cut(s)	225, 625, 1837
AspS9I	GGNCC	1 cut(s)	216
AsuC2I	CCSGG	1 cut(s)	793
AsuHPI	GGTGA	9 cut(s)	90, 258, 593, 1189, 1703, 1729, 2093, 2318, 2468
AsuII	TTCGAA	1 cut(s)	2424
AvaII	GGWCC	1 cut(s)	216
AxyI	CCTNAGG	1 cut(s)	2121
BaeGI	GKGCMC	2 cut(s)	317, 2597
BalI	TGGCCA	1 cut(s)	2057
BanII	GRGCYC	3 cut(s)	502, 1305, 1989
BbsI	GAAGAC	1 cut(s)	1566
Bbv12I	GWGCWC	3 cut(s)	1305, 1536, 1989
BccI	CCATC	5 cut(s)	844, 922, 976, 2444, 2530
BcgI	CGANNNNNNTGC	2 cut(s)	179, 213
BciT130I	CCWGG	3 cut(s)	710, 1420, 1715
BcnI	CCSGG	1 cut(s)	793
BcoDI	GTCTC	4 cut(s)	824, 932, 1486, 2245
BfaI	CTAG	6 cut(s)	21, 809, 834, 1115, 1494, 2598
BfrI	CTTAAG	1 cut(s)	1292
BfuAI	ACCTGC	1 cut(s)	1039
BglI	GCCNNNNNGGC	1 cut(s)	983
BglII	AGATCT	2 cut(s)	361, 1216
BlpI	GCTNAGC	1 cut(s)	1459
Bme1390I	CCNGG	4 cut(s)	710, 793, 1420, 1715
Bme18I	GGWCC	1 cut(s)	216
BmgT120I	GGNCC	1 cut(s)	216
BmiI	GGNNCC	2 cut(s)	218, 2205
BmrFI	CCNGG	4 cut(s)	710, 793, 1420, 1715
BmrI	ACTGGG	1 cut(s)	1702
BmuI	ACTGGG	1 cut(s)	1702
BpiI	GAAGAC	1 cut(s)	1566
BplI	GAGNNNNNCTC	2 cut(s)	761, 793
BpmI	CTGGAG	1 cut(s)	1973
Bpu1102I	GCTNAGC	1 cut(s)	1459
Bpu14I	TTCGAA	1 cut(s)	2424
BpuEI	CTTGAG	6 cut(s)	639, 869, 917, 989, 1241, 2567
BpuMI	CCSGG	1 cut(s)	793
Bsa29I	ATCGAT	1 cut(s)	420
BsaJI	CCNNGG	3 cut(s)	1251, 1419, 1800
BsaXI	ACNNNNNCTCC	2 cut(s)	2015, 2045
Bsc4I	CCNNNNNNNGG	6 cut(s)	311, 574, 798, 799, 1570, 1996
Bse1I	ACTGG	1 cut(s)	1697
Bse21I	CCTNAGG	1 cut(s)	2121
Bse3DI	GCAATG	2 cut(s)	1348, 1455
BseBI	CCWGG	3 cut(s)	710, 1420, 1715
BseCI	ATCGAT	1 cut(s)	420
BseDI	CCNNGG	3 cut(s)	1251, 1419, 1800
BseGI	GGATG	3 cut(s)	634, 1429, 2455
BseLI	CCNNNNNNNGG	6 cut(s)	311, 574, 798, 799, 1570, 1996
BseMI	GCAATG	2 cut(s)	1348, 1455
BseNI	ACTGG	1 cut(s)	1697
BseRI	GAGGAG	6 cut(s)	467, 932, 1028, 1227, 1334, 1997
BseSI	GKGCMC	2 cut(s)	317, 2597
Bsh1236I	CGCG	2 cut(s)	112, 223
BshFI	GGCC	2 cut(s)	1574, 2057
BshVI	ATCGAT	1 cut(s)	420
BsiHKAI	GWGCWC	3 cut(s)	1305, 1536, 1989
BsiSI	CCGG	1 cut(s)	793
BslFI	GGGAC	1 cut(s)	202
BslI	CCNNNNNNNGG	6 cut(s)	311, 574, 798, 799, 1570, 1996
BsmAI	GTCTC	4 cut(s)	824, 932, 1486, 2245
BsmFI	GGGAC	1 cut(s)	202
BsmI	GAATGC	1 cut(s)	1732
BsnI	GGCC	2 cut(s)	1574, 2057
Bsp119I	TTCGAA	1 cut(s)	2424
Bsp1286I	GDGCHC	6 cut(s)	317, 502, 1305, 1536, 1989, 2597
Bsp143I	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
Bsp1720I	GCTNAGC	1 cut(s)	1459
BspACI	CCGC	8 cut(s)	110, 137, 221, 284, 287, 1529, 2454, 2563
BspANI	GGCC	2 cut(s)	1574, 2057
BspDI	ATCGAT	1 cut(s)	420
BspFNI	CGCG	2 cut(s)	112, 223
BspHI	TCATGA	1 cut(s)	1104
BspLI	GGNNCC	2 cut(s)	218, 2205
BspMI	ACCTGC	1 cut(s)	1039
BspPI	GGATC	2 cut(s)	331, 2475
BspQI	GCTCTTC	1 cut(s)	1430
BspT104I	TTCGAA	1 cut(s)	2424
BspTI	CTTAAG	1 cut(s)	1292
BsrDI	GCAATG	2 cut(s)	1348, 1455
BsrI	ACTGG	1 cut(s)	1697
BssECI	CCNNGG	3 cut(s)	1251, 1419, 1800
BssMI	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
BssT1I	CCWWGG	1 cut(s)	1251
Bst2UI	CCWGG	3 cut(s)	710, 1420, 1715
Bst4CI	ACNGT	4 cut(s)	1004, 1312, 2096, 2510
Bst6I	CTCTTC	8 cut(s)	1425, 1430, 1756, 2136, 2152, 2157, 2204, 2421
BstAFI	CTTAAG	1 cut(s)	1292
BstBI	TTCGAA	1 cut(s)	2424
BstC8I	GCNNGC	6 cut(s)	291, 498, 621, 1332, 1353, 2067
BstF5I	GGATG	3 cut(s)	634, 1429, 2455
BstFNI	CGCG	2 cut(s)	112, 223
BstHHI	GCGC	3 cut(s)	225, 625, 1837
BstKTI	GATC	7 cut(s)	214, 266, 276, 326, 364, 1219, 2470
BstMAI	GTCTC	4 cut(s)	824, 932, 1486, 2245
BstMBI	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
BstNI	CCWGG	3 cut(s)	710, 1420, 1715
BstNSI	RCATGY	3 cut(s)	623, 1682, 2264
BstSCI	CCNGG	4 cut(s)	708, 791, 1418, 1713
BstSLI	GKGCMC	2 cut(s)	317, 2597
BstUI	CGCG	2 cut(s)	112, 223
BstV2I	GAAGAC	1 cut(s)	1566
BstX2I	RGATCY	2 cut(s)	361, 1216
BstYI	RGATCY	2 cut(s)	361, 1216
Bsu15I	ATCGAT	1 cut(s)	420
Bsu36I	CCTNAGG	1 cut(s)	2121
BsuRI	GGCC	2 cut(s)	1574, 2057
BsuTUI	ATCGAT	1 cut(s)	420
BtsCI	GGATG	3 cut(s)	634, 1429, 2455
BtsIMutI	CAGTG	3 cut(s)	713, 2101, 2515
BveI	ACCTGC	1 cut(s)	1039
Cac8I	GCNNGC	6 cut(s)	291, 498, 621, 1332, 1353, 2067
CaiI	CAGNNNCTG	4 cut(s)	53, 77, 715, 1151
CciI	TCATGA	1 cut(s)	1104
CfoI	GCGC	3 cut(s)	225, 625, 1837
Cfr13I	GGNCC	1 cut(s)	216
ClaI	ATCGAT	1 cut(s)	420
CseI	GACGC	1 cut(s)	248
CsiI	ACCWGGT	1 cut(s)	1713
Csp6I	GTAC	1 cut(s)	1245
CviQI	GTAC	1 cut(s)	1245
DpnI	GATC	7 cut(s)	213, 265, 275, 325, 363, 1218, 2469
DpnII	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
DraIII	CACNNNGTG	1 cut(s)	1717
EaeI	YGGCCR	1 cut(s)	2055
Eam1104I	CTCTTC	8 cut(s)	1425, 1430, 1756, 2136, 2152, 2157, 2204, 2421
EarI	CTCTTC	8 cut(s)	1425, 1430, 1756, 2136, 2152, 2157, 2204, 2421
Ecl136II	GAGCTC	2 cut(s)	1303, 1987
Eco130I	CCWWGG	1 cut(s)	1251
Eco24I	GRGCYC	3 cut(s)	502, 1305, 1989
Eco47I	GGWCC	1 cut(s)	216
Eco53kI	GAGCTC	2 cut(s)	1303, 1987
Eco57I	CTGAAG	3 cut(s)	692, 842, 2160
Eco81I	CCTNAGG	1 cut(s)	2121
EcoICRI	GAGCTC	2 cut(s)	1303, 1987
EcoRI	GAATTC	3 cut(s)	193, 1720, 2132
EcoRII	CCWGG	3 cut(s)	708, 1418, 1713
EcoT14I	CCWWGG	1 cut(s)	1251
EcoT38I	GRGCYC	3 cut(s)	502, 1305, 1989
ErhI	CCWWGG	1 cut(s)	1251
FalI	AAGNNNNNCTT	4 cut(s)	1447, 1479, 2166, 2198
FaqI	GGGAC	1 cut(s)	202
FauI	CCCGC	4 cut(s)	117, 130, 228, 291
FokI	GGATG	3 cut(s)	641, 1436, 2462
FriOI	GRGCYC	3 cut(s)	502, 1305, 1989
FspBI	CTAG	6 cut(s)	21, 809, 834, 1115, 1494, 2598
GlaI	GCGC	3 cut(s)	224, 624, 1836
GsuI	CTGGAG	1 cut(s)	1973
HaeIII	GGCC	2 cut(s)	1574, 2057
HapII	CCGG	1 cut(s)	793
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	3 cut(s)	225, 625, 1837
Hin6I	GCGC	3 cut(s)	223, 623, 1835
HinP1I	GCGC	3 cut(s)	223, 623, 1835
HincII	GTYRAC	2 cut(s)	232, 789
HindII	GTYRAC	2 cut(s)	232, 789
HindIII	AAGCTT	3 cut(s)	1349, 1456, 1809
HpaII	CCGG	1 cut(s)	793
HphI	GGTGA	9 cut(s)	90, 258, 593, 1189, 1703, 1729, 2093, 2318, 2468
Hpy166II	GTNNAC	4 cut(s)	122, 232, 789, 2437
Hpy188III	TCNNGA	9 cut(s)	356, 520, 656, 1105, 1220, 1960, 1990, 2242, 2584
Hpy8I	GTNNAC	4 cut(s)	122, 232, 789, 2437
Hpy99I	CGWCG	1 cut(s)	264
HpyCH4III	ACNGT	4 cut(s)	1004, 1312, 2096, 2510
HpyCH4IV	ACGT	1 cut(s)	960
HpySE526I	ACGT	1 cut(s)	960
HspAI	GCGC	3 cut(s)	223, 623, 1835
Kzo9I	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
LguI	GCTCTTC	1 cut(s)	1430
LmnI	GCTCC	8 cut(s)	140, 379, 1531, 1696, 1984, 1992, 2179, 2410
MabI	ACCWGGT	1 cut(s)	1713
MaeI	CTAG	6 cut(s)	21, 809, 834, 1115, 1494, 2598
MaeII	ACGT	1 cut(s)	960
MaeIII	GTNAC	3 cut(s)	911, 1287, 1671
MalI	GATC	7 cut(s)	213, 265, 275, 325, 363, 1218, 2469
MboI	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
MfeI	CAATTG	3 cut(s)	207, 252, 1197
MflI	RGATCY	2 cut(s)	361, 1216
MhlI	GDGCHC	6 cut(s)	317, 502, 1305, 1536, 1989, 2597
MlsI	TGGCCA	1 cut(s)	2057
MluNI	TGGCCA	1 cut(s)	2057
MlyI	GAGTC	4 cut(s)	355, 1295, 2327, 2432
MmeI	TCCRAC	2 cut(s)	522, 1389
Mox20I	TGGCCA	1 cut(s)	2057
MscI	TGGCCA	1 cut(s)	2057
MseI	TTAA	6 cut(s)	957, 1167, 1293, 1337, 1566, 2483
MslI	CAYNNNNRTG	2 cut(s)	726, 1977
Msp20I	TGGCCA	1 cut(s)	2057
MspA1I	CMGCKG	3 cut(s)	137, 146, 293
MspCI	CTTAAG	1 cut(s)	1292
MspI	CCGG	1 cut(s)	793
MspR9I	CCNGG	4 cut(s)	710, 793, 1420, 1715
MunI	CAATTG	3 cut(s)	207, 252, 1197
Mva1269I	GAATGC	1 cut(s)	1732
MvaI	CCWGG	3 cut(s)	710, 1420, 1715
MvnI	CGCG	2 cut(s)	112, 223
NciI	CCSGG	1 cut(s)	793
NdeII	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
NlaIV	GGNNCC	2 cut(s)	218, 2205
NmeAIII	GCCGAG	2 cut(s)	758, 784
NmuCI	GTSAC	1 cut(s)	1287
NspI	RCATGY	3 cut(s)	623, 1682, 2264
NspV	TTCGAA	1 cut(s)	2424
PaeI	GCATGC	1 cut(s)	623
PagI	TCATGA	1 cut(s)	1104
PciI	ACATGT	1 cut(s)	2260
PciSI	GCTCTTC	1 cut(s)	1430
PctI	GAATGC	1 cut(s)	1732
PleI	GAGTC	4 cut(s)	354, 1294, 2327, 2432
PpsI	GAGTC	4 cut(s)	354, 1294, 2327, 2432
PscI	ACATGT	1 cut(s)	2260
Psp124BI	GAGCTC	2 cut(s)	1305, 1989
Psp1406I	AACGTT	1 cut(s)	960
Psp6I	CCWGG	3 cut(s)	708, 1418, 1713
PspGI	CCWGG	3 cut(s)	708, 1418, 1713
PspN4I	GGNNCC	2 cut(s)	218, 2205
PspPI	GGNCC	1 cut(s)	216
PstNI	CAGNNNCTG	4 cut(s)	53, 77, 715, 1151
PsuI	RGATCY	2 cut(s)	361, 1216
PvuII	CAGCTG	2 cut(s)	146, 293
RsaI	GTAC	1 cut(s)	1246
RsaNI	GTAC	1 cut(s)	1245
RseI	CAYNNNNRTG	2 cut(s)	726, 1977
SacI	GAGCTC	2 cut(s)	1305, 1989
SapI	GCTCTTC	1 cut(s)	1430
SaqAI	TTAA	6 cut(s)	957, 1167, 1293, 1337, 1566, 2483
Sau3AI	GATC	7 cut(s)	211, 263, 273, 323, 361, 1216, 2467
Sau96I	GGNCC	1 cut(s)	216
SchI	GAGTC	4 cut(s)	355, 1295, 2327, 2432
ScrFI	CCNGG	4 cut(s)	710, 793, 1420, 1715
SduI	GDGCHC	6 cut(s)	317, 502, 1305, 1536, 1989, 2597
SexAI	ACCWGGT	1 cut(s)	1713
SfuI	TTCGAA	1 cut(s)	2424
SinI	GGWCC	1 cut(s)	216
SmiMI	CAYNNNNRTG	2 cut(s)	726, 1977
SmlI	CTYRAG	7 cut(s)	654, 884, 896, 968, 1220, 1292, 2582
SmoI	CTYRAG	7 cut(s)	654, 884, 896, 968, 1220, 1292, 2582
SphI	GCATGC	1 cut(s)	623
SsiI	CCGC	8 cut(s)	110, 137, 221, 284, 287, 1529, 2454, 2563
SspI	AATATT	1 cut(s)	2374
SspMI	CTAG	6 cut(s)	21, 809, 834, 1115, 1494, 2598
SstI	GAGCTC	2 cut(s)	1305, 1989
StyD4I	CCNGG	4 cut(s)	708, 791, 1418, 1713
StyI	CCWWGG	1 cut(s)	1251
TaaI	ACNGT	4 cut(s)	1004, 1312, 2096, 2510
TaiI	ACGT	1 cut(s)	963
TaqI	TCGA	7 cut(s)	262, 420, 519, 1305, 2130, 2243, 2424
TaqII	GACCGA	1 cut(s)	204
TauI	GCSGC	1 cut(s)	289
Tru1I	TTAA	6 cut(s)	957, 1167, 1293, 1337, 1566, 2483
Tru9I	TTAA	6 cut(s)	957, 1167, 1293, 1337, 1566, 2483
TscAI	CASTG	3 cut(s)	720, 2101, 2515
TseFI	GTSAC	1 cut(s)	1287
Tsp45I	GTSAC	1 cut(s)	1287
TspGWI	ACGGA	1 cut(s)	2326
TspRI	CASTG	3 cut(s)	720, 2101, 2515
Vha464I	CTTAAG	1 cut(s)	1292
VpaK11BI	GGWCC	1 cut(s)	216
XapI	RAATTY	9 cut(s)	57, 193, 1629, 1720, 1783, 2132, 2218, 2387, 2567
XceI	RCATGY	3 cut(s)	623, 1682, 2264
XspI	CTAG	6 cut(s)	21, 809, 834, 1115, 1494, 2598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.