Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0011015

Physical Location & Seq

Genomic Coordinates Forward (+)

1511066 .. 1514881

Gene Structure 3816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1021600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGTTCGTCGGCAGCCTCAATACGGCGGAGGACCCCGAATCCATCACCGCCCCGTTAATCTCGCGCCAGCGATCCGCCCCGAACTCCACGTCGCAGGTGGCTCTGGTGGGCGCCAATGTCTGCCCGATCGAGAGCCTCGATTACGAGATTCTCGAGAACGAGTTCTTCAAGCAGGACTGGCGGAGCCGCGGGAAGGTCCACGCGTTCCAGTACCTATTCATGAAGTGGGTCTCGTGTTTCCTCATCGGCATCGTTGTTGGACTCATCGGATTTTGCAACAACCTCGCTGTCGAAAACATCGCCGGAATTAAGTTCGTTGTCACTTCCAACATGATGTTGCAGCGCAGGTTTTGGCTGGCTTTTGCTGTCTTCTTCTTGTCGAATTTTGGTCTCACTCTGTTTGCGGTTGTGATCACGGCTTTGGTGGCGCCGGCGGCCGCGGGCTCCGGTATACCGGAGGTGAAGGCTTACCTGAACGGCGTCGATGCGCCCAGAATATTTTCCATTAAGACTTTGTTTGTTAAGATTGTTGGTAGTGTTACTGCAGTGTCATCGTCTCTTCTTATCGGAAAGGCAGGGCCCATGGTGCATACCGGTGCATGTGTTGCATCATTGGTGGGTCAGGGAGGATCGAAGAAGTATGGCTTGACATGGAAATGGCTGCGATACTTCAAGAATGATCGTGACCGTAGGGATCTCGTAACGTGTGGAGCAGCTGCTGGAATTGCTGCCTCTTTCCGTTCCCCTGTTGGTGGTGTACTCTTTGCATTTGAAGAAATGGCATCTTGGTGGAGAAGTGCACTTCTGTGGAGAGCTTTCTTTACAACTGCTCTAATCGCGATTGTACTTCGAGCTCTGATTGATGTTTGCTACAGCGGGAAATGTGGGCTATTTGGTACTGGGGGGCTGATAATGTTTGATGTTTATTCAGCTAGTATATCATATCACATTACCGATGTGCCTCCTGTGCTCCTCCTTGGCTTTGTAGGCGGCATGTTGGGCAGCCTATACAATTCTCTATTAACAAGAGTTCTCCGAGTATACAATATCATCCATGAGAGAGGTGTCATGTATAAAATTCTTATAGCTTGCACAATCTCCGTTTTCACATCTTGTCTTCTCTTTGGATTACCATGGCTTGCATCTTGTCGACCTTGCCCACCTCATGCAGCAGAAGCCTGCCCTACGATTGGACGGTCTGGTAACTACAAGAAGTTTCAGTGCCCTCCTGGTCATTATAATGACCTTGCCAGCCTCATATTTAACACGAATGATGATGCTATTAGAAACCTCTTCAGCAAGAACACTGATTCTGAGTTTCAATATTCCTCAATTATCATATTCTTTGTCACCTGTTTTTTCTTAAGTATCTTCAGCTACGGGGTTGTTGTGCCAGCTGGTCTTTTCGTACCTGTTATTGTGACTGGTGCATCTTATGGGCGTTTTGTCGGAATGCTAGTTGGCAAACACTCGAATCTCAATCATGGTCTATATGCTGTGTTGGGTGCTGCTTCTTTTCTTGGTGGAACCATGAGGATGACGGTCTCGCTCTGTGTAATTATTCTGGAATTGACCAATAATCTGTTATTGCTGCCATTAATAATGGTGGTTCTTCTTGTTTCCAAGACAACGGCGGATGCTTTCAATGGTAATATATATGATCTTATTATGAAAGCAAAGGGTCTTCCCTATCTGGAAAGTCATGTTGAACCGTACATGAGGCAGCTGACAGTAGCGGATGTAGTAATAGGGCCACTTCAACTCTTTCAAGGCATTGAGAAGGTTGGTAACATAGTACACGTCCTCCGGACTACAGGGCATAATGGGTTCCCTGTGATTGATGAGCCTCCGTTGTCTGAAACCCCCGTTTTGTATGGTTTAGTCCTCCGCGCTCATCTTATTGAATTGTTGAAGAAGAAAGCATTCGTGTCCACCCCAGTTCGGACGAGCACCAATTCTTTTAAACTCTTCTCATCGGTGGATTTTGCCAAGAGGGGTTCAGGCAACGGTGACAAGATAGAAGACATAGAATTGACTGAGGAAGAGAAGGAAATGTTCATTGACTTGCATCCCTTCACCAATGCTTCACCGTATACGGTTGTGGAGACAATGTCACTAGCAAAGGCGCTCACACTTTTCCGAGAAGTTGGCTTAAGGCACCTTCTAGTGATACCCAAGTTGTCCAATAGATCACCCGTGGTGGGTATATTGACGAGGCACGACTTCATTCCAGAACATATACTGAGCTTACACCCTATGCTGGTAAGGAGCAGGTGGAAAAGATTAAGATTCCGGCTGCCACCTCCGTCTAAACTCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005247 GO:0005253 GO:0005254 GO:0005575 GO:0006810 GO:0006811 GO:0006820 GO:0006821 GO:0008150 GO:0008308 GO:0008509 GO:0015075 GO:0015103 GO:0015108 GO:0015267 GO:0015318 GO:0015698 GO:0016020 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0034220 GO:0051179 GO:0051234 GO:0055085 GO:0098656 GO:0098660 GO:0098661 GO:1902476

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

774

Amino Acids

85.02

Weight (kDa)

9.21

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	132 - 545	8.3e-79	Voltage gated chloride channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011015)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G33280
fragaria_vesca	FvH4_1g02460 FvH4_1g02460 FvH4_1g02460 FvH4_1g02460
malus_domestica	MD02G1021600.v1.1 MD15G1164600.v1.1
prunus_persica	Prupe.7G250100_v2.0.a1
pyrus_communis	pycom02g01900 pycom15g14760
rosa_chinensis	RchiOBHm_Chr2g0087431
rosa_laevigata	RLG00000015868
rosa_multiflora	Rmu_sc0006064.1_g000011
rosa_roxburghii	Rroxscaffold_2G00153540
rosa_rugosa	Rorug01G0475300
rosa_samantha	Rh2AG028700 Rh2BG029000 Rh2CG029000 Rh2DG028800
rosa_wichuraiana	Rw2G002290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1239
AarI	CACCTGC	2 cut(s)	85, 2262
Acc36I	ACCTGC	3 cut(s)	85, 336, 2262
AccB1I	GGYRCC	3 cut(s)	110, 427, 2157
AccI	GTMKAC	4 cut(s)	451, 1041, 1150, 2093
AccII	CGCG	6 cut(s)	64, 189, 203, 440, 839, 1890
AccIII	TCCGGA	1 cut(s)	1806
AclWI	GGATC	3 cut(s)	66, 637, 702
AcoI	YGGCCR	1 cut(s)	435
AcsI	RAATTY	2 cut(s)	382, 1077
AcuI	CTGAAG	2 cut(s)	1279, 1357
AcyI	GRCGYC	3 cut(s)	111, 428, 480
AfaI	GTAC	7 cut(s)	212, 759, 846, 898, 1410, 1715, 1797
AfiI	CCNNNNNNNGG	7 cut(s)	22, 193, 752, 1190, 1941, 2201, 2260
AflII	CTTAAG	2 cut(s)	1363, 2152
AflIII	ACRYGT	3 cut(s)	201, 704, 1798
AgeI	ACCGGT	1 cut(s)	593
AjiI	CACGTC	2 cut(s)	90, 1801
AjnI	CCWGG	1 cut(s)	1228
AleI	CACNNNNGTG	1 cut(s)	805
AluBI	AGCT	9 cut(s)	716, 815, 854, 932, 1088, 1377, 1397, 1726, 2247
AluI	AGCT	9 cut(s)	716, 815, 854, 932, 1088, 1377, 1397, 1726, 2247
Alw21I	GWGCWC	4 cut(s)	802, 856, 972, 1952
Alw26I	GTCTC	5 cut(s)	235, 395, 561, 1549, 2099
Alw44I	GTGCAC	1 cut(s)	798
AlwI	GGATC	3 cut(s)	66, 637, 702
AlwNI	CAGNNNCTG	1 cut(s)	719
Ama87I	CYCGRG	1 cut(s)	152
Aor13HI	TCCGGA	1 cut(s)	1806
AoxI	GGCC	3 cut(s)	435, 578, 1751
ApaI	GGGCCC	1 cut(s)	582
ApaLI	GTGCAC	1 cut(s)	798
ApoI	RAATTY	2 cut(s)	382, 1077
ArsI	GACNNNNNNTTYG	2 cut(s)	74, 106
AseI	ATTAAT	1 cut(s)	1598
AsiGI	ACCGGT	1 cut(s)	593
Asp700I	GAANNNNTTC	3 cut(s)	161, 499, 1922
AspLEI	GCGC	7 cut(s)	66, 113, 345, 430, 490, 1892, 2128
AspS9I	GGNCC	5 cut(s)	31, 196, 578, 579, 1751
AsuHPI	GGTGA	7 cut(s)	37, 472, 1342, 2021, 2068, 2079, 2184
AvaI	CYCGRG	1 cut(s)	152
AvaII	GGWCC	2 cut(s)	31, 196
BaeGI	GKGCMC	3 cut(s)	582, 802, 1226
BaeI	ACNNNNGTAYC	2 cut(s)	2162, 2195
BanI	GGYRCC	3 cut(s)	110, 427, 2157
BanII	GRGCYC	3 cut(s)	446, 582, 856
BauI	CACGAG	1 cut(s)	232
BbsI	GAAGAC	4 cut(s)	361, 1109, 1676, 2028
Bbv12I	GWGCWC	4 cut(s)	802, 856, 972, 1952
BccI	CCATC	1 cut(s)	50
BceAI	ACGGC	4 cut(s)	39, 432, 493, 1647
BcgI	CGANNNNNNTGC	4 cut(s)	265, 299, 534, 568
BciT130I	CCWGG	1 cut(s)	1230
BclI	TGATCA	1 cut(s)	411
BcoDI	GTCTC	5 cut(s)	235, 395, 561, 1549, 2099
BfaI	CTAG	4 cut(s)	933, 1457, 2117, 2165
BfmI	CTRYAG	3 cut(s)	543, 871, 1812
BfoI	RGCGCY	3 cut(s)	114, 431, 2129
BfrI	CTTAAG	2 cut(s)	1363, 2152
BfuAI	ACCTGC	3 cut(s)	85, 336, 2262
Bme1390I	CCNGG	1 cut(s)	1230
Bme18I	GGWCC	2 cut(s)	31, 196
BmeT110I	CYCGRG	1 cut(s)	152
BmgBI	CACGTC	2 cut(s)	90, 1801
BmgT120I	GGNCC	5 cut(s)	31, 196, 578, 579, 1751
BmiI	GGNNCC	9 cut(s)	33, 112, 185, 429, 445, 580, 1528, 1829, 2159
BmrFI	CCNGG	1 cut(s)	1230
BmrI	ACTGGG	2 cut(s)	909, 1931
BmsI	GCATC	9 cut(s)	258, 475, 617, 791, 1151, 1267, 1439, 1627, 2077
BmuI	ACTGGG	2 cut(s)	909, 1931
BpiI	GAAGAC	4 cut(s)	361, 1109, 1676, 2028
BsaHI	GRCGYC	3 cut(s)	111, 428, 480
BsaI	GGTCTC	3 cut(s)	235, 395, 1549
BsaJI	CCNNGG	6 cut(s)	187, 438, 582, 976, 1133, 2196
BsaWI	WCCGGW	4 cut(s)	446, 454, 593, 1806
BsaXI	ACNNNNNCTCC	4 cut(s)	1788, 1818, 2096, 2126
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 193, 752, 1190, 1941, 2201, 2260
Bse118I	RCCGGY	2 cut(s)	430, 593
Bse1I	ACTGG	5 cut(s)	182, 208, 904, 1429, 1937
BseAI	TCCGGA	1 cut(s)	1806
BseBI	CCWGG	1 cut(s)	1230
BseDI	CCNNGG	6 cut(s)	187, 438, 582, 976, 1133, 2196
BseGI	GGATG	5 cut(s)	1050, 1542, 1642, 1744, 2068
BseLI	CCNNNNNNNGG	7 cut(s)	22, 193, 752, 1190, 1941, 2201, 2260
BseMII	CTCAG	3 cut(s)	1305, 2028, 2234
BseNI	ACTGG	5 cut(s)	182, 208, 904, 1429, 1937
BseRI	GAGGAG	1 cut(s)	962
BseSI	GKGCMC	3 cut(s)	582, 802, 1226
BseX3I	CGGCCG	1 cut(s)	435
Bsh1236I	CGCG	6 cut(s)	64, 189, 203, 440, 839, 1890
Bsh1285I	CGRYCG	2 cut(s)	129, 438
BshFI	GGCC	3 cut(s)	437, 580, 1753
BshNI	GGYRCC	3 cut(s)	110, 427, 2157
BshTI	ACCGGT	1 cut(s)	593
BsiEI	CGRYCG	2 cut(s)	129, 438
BsiHKAI	GWGCWC	4 cut(s)	802, 856, 972, 1952
BsiHKCI	CYCGRG	1 cut(s)	152
BsiSI	CCGG	7 cut(s)	303, 431, 447, 455, 594, 1807, 2293
BslI	CCNNNNNNNGG	7 cut(s)	22, 193, 752, 1190, 1941, 2201, 2260
BsmAI	GTCTC	5 cut(s)	235, 395, 561, 1549, 2099
BsmBI	CGTCTC	1 cut(s)	561
BsmI	GAATGC	2 cut(s)	1458, 1922
BsnI	GGCC	3 cut(s)	437, 580, 1753
Bso31I	GGTCTC	3 cut(s)	235, 395, 1549
BsoBI	CYCGRG	1 cut(s)	152
Bsp120I	GGGCCC	1 cut(s)	578
Bsp1286I	GDGCHC	7 cut(s)	446, 582, 802, 856, 972, 1226, 1952
Bsp13I	TCCGGA	1 cut(s)	1806
Bsp143I	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
Bsp19I	CCATGG	2 cut(s)	582, 1133
Bsp68I	TCGCGA	1 cut(s)	839
BspANI	GGCC	3 cut(s)	437, 580, 1753
BspCNI	CTCAG	3 cut(s)	1306, 2029, 2235
BspEI	TCCGGA	1 cut(s)	1806
BspFNI	CGCG	6 cut(s)	64, 189, 203, 440, 839, 1890
BspHI	TCATGA	1 cut(s)	219
BspLI	GGNNCC	9 cut(s)	33, 112, 185, 429, 445, 580, 1528, 1829, 2159
BspMAI	CTGCAG	1 cut(s)	547
BspMI	ACCTGC	3 cut(s)	85, 336, 2262
BspPI	GGATC	3 cut(s)	66, 637, 702
BspT107I	GGYRCC	3 cut(s)	110, 427, 2157
BspTI	CTTAAG	2 cut(s)	1363, 2152
BspTNI	GGTCTC	3 cut(s)	235, 395, 1549
BsrFI	RCCGGY	2 cut(s)	430, 593
BsrI	ACTGG	5 cut(s)	182, 208, 904, 1429, 1937
BssAI	RCCGGY	2 cut(s)	430, 593
BssECI	CCNNGG	6 cut(s)	187, 438, 582, 976, 1133, 2196
BssMI	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
BssNAI	GTATAC	3 cut(s)	452, 1042, 2094
BssNI	GRCGYC	3 cut(s)	111, 428, 480
BssSI	CACGAG	1 cut(s)	232
BssT1I	CCWWGG	3 cut(s)	582, 976, 1133
Bst1107I	GTATAC	3 cut(s)	452, 1042, 2094
Bst2BI	CACGAG	1 cut(s)	232
Bst2UI	CCWGG	1 cut(s)	1230
Bst4CI	ACNGT	8 cut(s)	689, 1197, 1543, 1713, 1732, 2009, 2091, 2098
Bst6I	CTCTTC	4 cut(s)	564, 1298, 1973, 2037
BstACI	GRCGYC	3 cut(s)	111, 428, 480
BstAFI	CTTAAG	2 cut(s)	1363, 2152
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstC8I	GCNNGC	9 cut(s)	68, 357, 432, 442, 1090, 1140, 1180, 1252, 1395
BstDEI	CTNAG	3 cut(s)	1314, 2037, 2243
BstDSI	CCRYGG	5 cut(s)	187, 438, 582, 1133, 2196
BstF5I	GGATG	5 cut(s)	1050, 1542, 1642, 1744, 2068
BstFNI	CGCG	6 cut(s)	64, 189, 203, 440, 839, 1890
BstH2I	RGCGCY	3 cut(s)	114, 431, 2129
BstHHI	GCGC	7 cut(s)	66, 113, 345, 430, 490, 1892, 2128
BstKTI	GATC	8 cut(s)	74, 129, 414, 632, 682, 697, 1663, 2192
BstMAI	GTCTC	5 cut(s)	235, 395, 561, 1549, 2099
BstMBI	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
BstMCI	CGRYCG	2 cut(s)	129, 438
BstNI	CCWGG	1 cut(s)	1230
BstNSI	RCATGY	2 cut(s)	603, 997
BstSCI	CCNGG	1 cut(s)	1228
BstSFI	CTRYAG	3 cut(s)	543, 871, 1812
BstSLI	GKGCMC	3 cut(s)	582, 802, 1226
BstUI	CGCG	6 cut(s)	64, 189, 203, 440, 839, 1890
BstV2I	GAAGAC	4 cut(s)	361, 1109, 1676, 2028
BstX2I	RGATCY	1 cut(s)	694
BstYI	RGATCY	1 cut(s)	694
BstZ17I	GTATAC	3 cut(s)	452, 1042, 2094
BstZI	CGGCCG	1 cut(s)	435
BsuRI	GGCC	3 cut(s)	437, 580, 1753
BtgI	CCRYGG	5 cut(s)	187, 438, 582, 1133, 2196
BtgZI	GCGATG	1 cut(s)	283
BtrI	CACGTC	2 cut(s)	90, 1801
BtsCI	GGATG	5 cut(s)	1050, 1542, 1642, 1744, 2068
BtsI	GCAGTG	1 cut(s)	552
BtsIMutI	CAGTG	3 cut(s)	552, 1226, 1305
BtuMI	TCGCGA	1 cut(s)	839
BveI	ACCTGC	3 cut(s)	85, 336, 2262
Cac8I	GCNNGC	9 cut(s)	68, 357, 432, 442, 1090, 1140, 1180, 1252, 1395
CaiI	CAGNNNCTG	1 cut(s)	719
CciI	TCATGA	1 cut(s)	219
CciNI	GCGGCCGC	1 cut(s)	435
CfoI	GCGC	7 cut(s)	66, 113, 345, 430, 490, 1892, 2128
Cfr10I	RCCGGY	2 cut(s)	430, 593
Cfr13I	GGNCC	5 cut(s)	31, 196, 578, 579, 1751
Cfr42I	CCGCGG	2 cut(s)	190, 441
CseI	GACGC	1 cut(s)	469
Csp6I	GTAC	7 cut(s)	211, 758, 845, 897, 1409, 1714, 1796
CspAI	ACCGGT	1 cut(s)	593
CviQI	GTAC	7 cut(s)	211, 758, 845, 897, 1409, 1714, 1796
DdeI	CTNAG	3 cut(s)	1314, 2037, 2243
DinI	GGCGCC	2 cut(s)	112, 429
DpnI	GATC	8 cut(s)	73, 128, 413, 631, 681, 696, 1662, 2191
DpnII	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
DraI	TTTAAA	1 cut(s)	1963
EaeI	YGGCCR	1 cut(s)	435
EagI	CGGCCG	1 cut(s)	435
Eam1104I	CTCTTC	4 cut(s)	564, 1298, 1973, 2037
EarI	CTCTTC	4 cut(s)	564, 1298, 1973, 2037
EciI	GGCGGA	4 cut(s)	41, 64, 196, 1649
Ecl136II	GAGCTC	1 cut(s)	854
EclXI	CGGCCG	1 cut(s)	435
Eco130I	CCWWGG	3 cut(s)	582, 976, 1133
Eco24I	GRGCYC	3 cut(s)	446, 582, 856
Eco31I	GGTCTC	3 cut(s)	235, 395, 1549
Eco47I	GGWCC	2 cut(s)	31, 196
Eco52I	CGGCCG	1 cut(s)	435
Eco53kI	GAGCTC	1 cut(s)	854
Eco57I	CTGAAG	2 cut(s)	1279, 1357
Eco88I	CYCGRG	1 cut(s)	152
EcoICRI	GAGCTC	1 cut(s)	854
EcoO109I	RGGNCCY	2 cut(s)	31, 578
EcoRII	CCWGG	1 cut(s)	1228
EcoT14I	CCWWGG	3 cut(s)	582, 976, 1133
EcoT38I	GRGCYC	3 cut(s)	446, 582, 856
EgeI	GGCGCC	2 cut(s)	112, 429
EheI	GGCGCC	2 cut(s)	112, 429
ErhI	CCWWGG	3 cut(s)	582, 976, 1133
Esp3I	CGTCTC	1 cut(s)	561
FalI	AAGNNNNNCTT	2 cut(s)	629, 661
FauI	CCCGC	3 cut(s)	182, 433, 869
FbaI	TGATCA	1 cut(s)	411
FblI	GTMKAC	4 cut(s)	451, 1041, 1150, 2093
FokI	GGATG	5 cut(s)	1037, 1549, 1649, 1751, 2055
FriOI	GRGCYC	3 cut(s)	446, 582, 856
FspBI	CTAG	4 cut(s)	933, 1457, 2117, 2165
GlaI	GCGC	7 cut(s)	65, 112, 344, 429, 489, 1891, 2127
HaeII	RGCGCY	3 cut(s)	114, 431, 2129
HaeIII	GGCC	3 cut(s)	437, 580, 1753
HapII	CCGG	7 cut(s)	303, 431, 447, 455, 594, 1807, 2293
HgaI	GACGC	1 cut(s)	469
HhaI	GCGC	7 cut(s)	66, 113, 345, 430, 490, 1892, 2128
Hin1I	GRCGYC	3 cut(s)	111, 428, 480
Hin6I	GCGC	7 cut(s)	64, 111, 343, 428, 488, 1890, 2126
HinP1I	GCGC	7 cut(s)	64, 111, 343, 428, 488, 1890, 2126
HincII	GTYRAC	1 cut(s)	1151
HindII	GTYRAC	1 cut(s)	1151
HinfI	GANTC	6 cut(s)	38, 148, 261, 1310, 1474, 2289
HpaII	CCGG	7 cut(s)	303, 431, 447, 455, 594, 1807, 2293
HphI	GGTGA	7 cut(s)	37, 472, 1342, 2021, 2068, 2079, 2184
Hpy166II	GTNNAC	9 cut(s)	199, 452, 758, 800, 1042, 1151, 1798, 1932, 2094
Hpy188I	TCNGA	9 cut(s)	269, 569, 858, 1037, 1315, 1451, 1858, 1944, 2141
Hpy8I	GTNNAC	9 cut(s)	199, 452, 758, 800, 1042, 1151, 1798, 1932, 2094
Hpy99I	CGWCG	3 cut(s)	11, 94, 485
HpyAV	CCTTC	6 cut(s)	187, 457, 1774, 2041, 2083, 2171
HpyCH4III	ACNGT	8 cut(s)	689, 1197, 1543, 1713, 1732, 2009, 2091, 2098
HpyCH4IV	ACGT	3 cut(s)	89, 704, 1800
HpyF3I	CTNAG	3 cut(s)	1314, 2037, 2243
HpySE526I	ACGT	3 cut(s)	89, 704, 1800
Hsp92I	GRCGYC	3 cut(s)	111, 428, 480
HspAI	GCGC	7 cut(s)	64, 111, 343, 428, 488, 1890, 2126
KasI	GGCGCC	2 cut(s)	110, 427
Kpn2I	TCCGGA	1 cut(s)	1806
KroI	GCCGGC	1 cut(s)	430
KroNI	GCCGGC	1 cut(s)	432
Ksp22I	TGATCA	1 cut(s)	411
KspI	CCGCGG	2 cut(s)	190, 441
Kzo9I	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
LmnI	GCTCC	5 cut(s)	183, 449, 710, 975, 2268
LweI	GCATC	9 cut(s)	258, 475, 617, 791, 1151, 1267, 1439, 1627, 2077
MaeI	CTAG	4 cut(s)	933, 1457, 2117, 2165
MaeII	ACGT	3 cut(s)	89, 704, 1800
MalI	GATC	8 cut(s)	73, 128, 413, 631, 681, 696, 1662, 2191
MboI	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
MflI	RGATCY	1 cut(s)	694
MhlI	GDGCHC	7 cut(s)	446, 582, 802, 856, 972, 1226, 1952
MluI	ACGCGT	1 cut(s)	201
Mly113I	GGCGCC	2 cut(s)	111, 428
MlyI	GAGTC	1 cut(s)	255
MmeI	TCCRAC	3 cut(s)	238, 351, 1429
MreI	CGCCGGCG	1 cut(s)	430
MroI	TCCGGA	1 cut(s)	1806
MroNI	GCCGGC	1 cut(s)	430
MroXI	GAANNNNTTC	3 cut(s)	161, 499, 1922
MslI	CAYNNNNRTG	6 cut(s)	594, 655, 787, 805, 1239, 1535
MspA1I	CMGCKG	6 cut(s)	189, 440, 716, 876, 1397, 1726
MspCI	CTTAAG	2 cut(s)	1363, 2152
MspI	CCGG	7 cut(s)	303, 431, 447, 455, 594, 1807, 2293
MspR9I	CCNGG	1 cut(s)	1230
Mva1269I	GAATGC	2 cut(s)	1458, 1922
MvaI	CCWGG	1 cut(s)	1230
MvnI	CGCG	6 cut(s)	64, 189, 203, 440, 839, 1890
NaeI	GCCGGC	1 cut(s)	432
NarI	GGCGCC	2 cut(s)	111, 428
NcoI	CCATGG	2 cut(s)	582, 1133
NdeII	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
NgoMIV	GCCGGC	1 cut(s)	430
NlaIV	GGNNCC	9 cut(s)	33, 112, 185, 429, 445, 580, 1528, 1829, 2159
NmuCI	GTSAC	6 cut(s)	319, 683, 1348, 1420, 2009, 2112
NotI	GCGGCCGC	1 cut(s)	435
NruI	TCGCGA	1 cut(s)	839
NspI	RCATGY	2 cut(s)	603, 997
OliI	CACNNNNGTG	1 cut(s)	805
PaeR7I	CTCGAG	1 cut(s)	152
PagI	TCATGA	1 cut(s)	219
PaqCI	CACCTGC	2 cut(s)	85, 2262
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 150
PctI	GAATGC	2 cut(s)	1458, 1922
PdiI	GCCGGC	1 cut(s)	432
PdmI	GAANNNNTTC	3 cut(s)	161, 499, 1922
PfeI	GAWTC	5 cut(s)	38, 148, 1310, 1474, 2289
PflFI	GACNNNGTC	1 cut(s)	2110
PinAI	ACCGGT	1 cut(s)	593
Ple19I	CGATCG	1 cut(s)	129
PleI	GAGTC	1 cut(s)	255
PluTI	GGCGCC	2 cut(s)	114, 431
PpsI	GAGTC	1 cut(s)	255
PpuMI	RGGWCCY	1 cut(s)	31
PshBI	ATTAAT	1 cut(s)	1598
PsiI	TTATAA	1 cut(s)	1239
Psp124BI	GAGCTC	1 cut(s)	856
Psp5II	RGGWCCY	1 cut(s)	31
Psp6I	CCWGG	1 cut(s)	1228
PspGI	CCWGG	1 cut(s)	1228
PspN4I	GGNNCC	9 cut(s)	33, 112, 185, 429, 445, 580, 1528, 1829, 2159
PspOMI	GGGCCC	1 cut(s)	578
PspPI	GGNCC	5 cut(s)	31, 196, 578, 579, 1751
PspPPI	RGGWCCY	1 cut(s)	31
PstI	CTGCAG	1 cut(s)	547
PstNI	CAGNNNCTG	1 cut(s)	719
PsuI	RGATCY	1 cut(s)	694
PsyI	GACNNNGTC	1 cut(s)	2110
PvuI	CGATCG	1 cut(s)	129
PvuII	CAGCTG	3 cut(s)	716, 1397, 1726
RruI	TCGCGA	1 cut(s)	839
RsaI	GTAC	7 cut(s)	212, 759, 846, 898, 1410, 1715, 1797
RsaNI	GTAC	7 cut(s)	211, 758, 845, 897, 1409, 1714, 1796
RseI	CAYNNNNRTG	6 cut(s)	594, 655, 787, 805, 1239, 1535
SacI	GAGCTC	1 cut(s)	856
SacII	CCGCGG	2 cut(s)	190, 441
SalI	GTCGAC	1 cut(s)	1149
Sau3AI	GATC	8 cut(s)	71, 126, 411, 629, 679, 694, 1660, 2189
Sau96I	GGNCC	5 cut(s)	31, 196, 578, 579, 1751
SchI	GAGTC	1 cut(s)	255
ScrFI	CCNGG	1 cut(s)	1230
SduI	GDGCHC	7 cut(s)	446, 582, 802, 856, 972, 1226, 1952
SfaNI	GCATC	9 cut(s)	258, 475, 617, 791, 1151, 1267, 1439, 1627, 2077
SfcI	CTRYAG	3 cut(s)	543, 871, 1812
SfoI	GGCGCC	2 cut(s)	112, 429
Sfr274I	CTCGAG	1 cut(s)	152
Sfr303I	CCGCGG	2 cut(s)	190, 441
SgrAI	CRCCGGYG	1 cut(s)	430
SgrBI	CCGCGG	2 cut(s)	190, 441
SinI	GGWCC	2 cut(s)	31, 196
SlaI	CTCGAG	1 cut(s)	152
SmiMI	CAYNNNNRTG	6 cut(s)	594, 655, 787, 805, 1239, 1535
SmlI	CTYRAG	3 cut(s)	152, 1363, 2152
SmoI	CTYRAG	3 cut(s)	152, 1363, 2152
SspDI	GGCGCC	2 cut(s)	110, 427
SspI	AATATT	2 cut(s)	498, 1325
SspMI	CTAG	4 cut(s)	933, 1457, 2117, 2165
SstI	GAGCTC	1 cut(s)	856
StyD4I	CCNGG	1 cut(s)	1228
StyI	CCWWGG	3 cut(s)	582, 976, 1133
TaaI	ACNGT	8 cut(s)	689, 1197, 1543, 1713, 1732, 2009, 2091, 2098
TaiI	ACGT	3 cut(s)	92, 707, 1803
TatI	WGTACW	3 cut(s)	757, 844, 1795
TauI	GCSGC	4 cut(s)	189, 437, 440, 993
TfiI	GAWTC	5 cut(s)	38, 148, 1310, 1474, 2289
TscAI	CASTG	3 cut(s)	552, 1226, 1312
TseFI	GTSAC	6 cut(s)	319, 683, 1348, 1420, 2009, 2112
Tsp45I	GTSAC	6 cut(s)	319, 683, 1348, 1420, 2009, 2112
TspDTI	ATGAA	5 cut(s)	208, 236, 1685, 2047, 2215
TspGWI	ACGGA	4 cut(s)	728, 1090, 1839, 2295
TspRI	CASTG	3 cut(s)	552, 1226, 1312
Tth111I	GACNNNGTC	1 cut(s)	2110
Vha464I	CTTAAG	2 cut(s)	1363, 2152
VneI	GTGCAC	1 cut(s)	798
VpaK11BI	GGWCC	2 cut(s)	31, 196
VspI	ATTAAT	1 cut(s)	1598
XapI	RAATTY	2 cut(s)	382, 1077
XceI	RCATGY	2 cut(s)	603, 997
XcmI	CCANNNNNNNNNTGG	1 cut(s)	94
XhoI	CTCGAG	1 cut(s)	152
XmiI	GTMKAC	4 cut(s)	451, 1041, 1150, 2093
XmnI	GAANNNNTTC	3 cut(s)	161, 499, 1922
XspI	CTAG	4 cut(s)	933, 1457, 2117, 2165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.