chloride
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G33280 |
| fragaria_vesca | FvH4_1g02460 FvH4_1g02460 FvH4_1g02460 FvH4_1g02460 |
| malus_domestica | MD02G1021600.v1.1 MD15G1164600.v1.1 |
| prunus_persica | Prupe.7G250100_v2.0.a1 |
| pyrus_communis | pycom02g01900 pycom15g14760 |
| rosa_chinensis | RchiOBHm_Chr2g0087431 |
| rosa_laevigata | RLG00000015868 |
| rosa_multiflora | Rmu_sc0006064.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00153540 |
| rosa_rugosa | Rorug01G0475300 |
| rosa_samantha | Rh2AG028700 Rh2BG029000 Rh2CG029000 Rh2DG028800 |
| rosa_wichuraiana | Rw2G002290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1086 |
| AarI | CACCTGC | 1 cut(s) | 2274 |
| Acc36I | ACCTGC | 3 cut(s) | 97, 348, 2274 |
| AccB1I | GGYRCC | 4 cut(s) | 122, 439, 608, 2169 |
| AccI | GTMKAC | 2 cut(s) | 495, 1162 |
| AccII | CGCG | 1 cut(s) | 500 |
| AciI | CCGC | 6 cut(s) | 60, 452, 557, 1002, 1862, 1978 |
| AclWI | GGATC | 3 cut(s) | 649, 714, 730 |
| AcoI | YGGCCR | 1 cut(s) | 2319 |
| AcsI | RAATTY | 1 cut(s) | 323 |
| AcyI | GRCGYC | 4 cut(s) | 123, 440, 492, 1077 |
| AfaI | GTAC | 4 cut(s) | 224, 910, 1422, 1809 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 669, 764, 819, 1202, 1977, 2213 |
| AflII | CTTAAG | 2 cut(s) | 1375, 2164 |
| AflIII | ACRYGT | 2 cut(s) | 716, 1810 |
| AjnI | CCWGG | 2 cut(s) | 662, 1240 |
| AleI | CACNNNNGTG | 1 cut(s) | 1949 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 158, 190 |
| Alw21I | GWGCWC | 2 cut(s) | 861, 1964 |
| Alw26I | GTCTC | 5 cut(s) | 266, 690, 1505, 1561, 2111 |
| AlwI | GGATC | 3 cut(s) | 649, 714, 730 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 731, 1748 |
| Ama87I | CYCGRG | 1 cut(s) | 73 |
| AoxI | GGCC | 4 cut(s) | 271, 590, 1763, 2319 |
| ApeKI | GCWGC | 6 cut(s) | 449, 728, 740, 1181, 1520, 1735 |
| ApoI | RAATTY | 1 cut(s) | 323 |
| AseI | ATTAAT | 1 cut(s) | 68 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 173, 239, 511, 671, 1934 |
| AspLEI | GCGC | 3 cut(s) | 125, 442, 502 |
| AspS9I | GGNCC | 3 cut(s) | 43, 590, 1763 |
| AsuC2I | CCSGG | 3 cut(s) | 47, 504, 863 |
| AsuHPI | GGTGA | 6 cut(s) | 49, 325, 484, 1354, 2033, 2091 |
| AvaI | CYCGRG | 1 cut(s) | 73 |
| AvaII | GGWCC | 1 cut(s) | 43 |
| BaeGI | GKGCMC | 2 cut(s) | 814, 1906 |
| BanI | GGYRCC | 4 cut(s) | 122, 439, 608, 2169 |
| BanII | GRGCYC | 2 cut(s) | 458, 868 |
| BauI | CACGAG | 1 cut(s) | 2197 |
| BbsI | GAAGAC | 3 cut(s) | 373, 1121, 1688 |
| Bbv12I | GWGCWC | 2 cut(s) | 861, 1964 |
| BbvI | GCAGC | 6 cut(s) | 436, 715, 727, 1193, 1507, 1747 |
| BccI | CCATC | 5 cut(s) | 62, 146, 589, 784, 1914 |
| BceAI | ACGGC | 4 cut(s) | 28, 183, 284, 505 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 277, 307, 311, 341 |
| BciT130I | CCWGG | 2 cut(s) | 664, 1242 |
| BclI | TGATCA | 1 cut(s) | 423 |
| BcnI | CCSGG | 3 cut(s) | 47, 504, 863 |
| BcoDI | GTCTC | 5 cut(s) | 266, 690, 1505, 1561, 2111 |
| BfaI | CTAG | 3 cut(s) | 2129, 2177, 2273 |
| BfmI | CTRYAG | 1 cut(s) | 1824 |
| BfoI | RGCGCY | 2 cut(s) | 126, 443 |
| BfrI | CTTAAG | 2 cut(s) | 1375, 2164 |
| BfuAI | ACCTGC | 3 cut(s) | 97, 348, 2274 |
| BglII | AGATCT | 1 cut(s) | 2201 |
| BisI | GCNGC | 7 cut(s) | 450, 729, 741, 1003, 1182, 1521, 1736 |
| BlsI | GCNGC | 7 cut(s) | 451, 730, 742, 1004, 1183, 1522, 1737 |
| Bme1390I | CCNGG | 5 cut(s) | 47, 504, 664, 863, 1242 |
| Bme18I | GGWCC | 1 cut(s) | 43 |
| BmeT110I | CYCGRG | 1 cut(s) | 73 |
| BmgT120I | GGNCC | 3 cut(s) | 43, 590, 1763 |
| BmrFI | CCNGG | 5 cut(s) | 47, 504, 664, 863, 1242 |
| BmrI | ACTGGG | 1 cut(s) | 1943 |
| BmuI | ACTGGG | 1 cut(s) | 1943 |
| BpiI | GAAGAC | 3 cut(s) | 373, 1121, 1688 |
| BpmI | CTGGAG | 2 cut(s) | 211, 1727 |
| BpuMI | CCSGG | 3 cut(s) | 47, 504, 863 |
| BsaHI | GRCGYC | 4 cut(s) | 123, 440, 492, 1077 |
| BsaI | GGTCTC | 3 cut(s) | 266, 690, 1505 |
| BsaJI | CCNNGG | 3 cut(s) | 199, 988, 1145 |
| BsaWI | WCCGGW | 2 cut(s) | 466, 675 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 158, 184, 188, 214, 2108, 2138, 2188, 2218 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 669, 764, 819, 1202, 1977, 2213 |
| Bse118I | RCCGGY | 2 cut(s) | 314, 442 |
| Bse1I | ACTGG | 4 cut(s) | 194, 610, 1441, 1949 |
| Bse3DI | GCAATG | 2 cut(s) | 960, 2023 |
| BseBI | CCWGG | 2 cut(s) | 664, 1242 |
| BseDI | CCNNGG | 3 cut(s) | 199, 988, 1145 |
| BseGI | GGATG | 2 cut(s) | 1554, 2080 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 669, 764, 819, 1202, 1977, 2213 |
| BseMI | GCAATG | 2 cut(s) | 960, 2023 |
| BseMII | CTCAG | 2 cut(s) | 1317, 1831 |
| BseNI | ACTGG | 4 cut(s) | 194, 610, 1441, 1949 |
| BseRI | GAGGAG | 3 cut(s) | 2066, 2069, 2304 |
| BseSI | GKGCMC | 2 cut(s) | 814, 1906 |
| BseXI | GCAGC | 6 cut(s) | 436, 715, 727, 1193, 1507, 1747 |
| BseYI | CCCAGC | 2 cut(s) | 731, 1171 |
| Bsh1236I | CGCG | 1 cut(s) | 500 |
| BshFI | GGCC | 4 cut(s) | 273, 592, 1765, 2321 |
| BshNI | GGYRCC | 4 cut(s) | 122, 439, 608, 2169 |
| BsiHKAI | GWGCWC | 2 cut(s) | 861, 1964 |
| BsiHKCI | CYCGRG | 1 cut(s) | 73 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 669, 764, 819, 1202, 1977, 2213 |
| BsmAI | GTCTC | 5 cut(s) | 266, 690, 1505, 1561, 2111 |
| BsnI | GGCC | 4 cut(s) | 273, 592, 1765, 2321 |
| Bso31I | GGTCTC | 3 cut(s) | 266, 690, 1505 |
| BsoBI | CYCGRG | 1 cut(s) | 73 |
| Bsp1286I | GDGCHC | 6 cut(s) | 458, 814, 861, 868, 1906, 1964 |
| Bsp143I | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| BspACI | CCGC | 6 cut(s) | 60, 452, 557, 1002, 1862, 1978 |
| BspANI | GGCC | 4 cut(s) | 273, 592, 1765, 2321 |
| BspCNI | CTCAG | 2 cut(s) | 1318, 1830 |
| BspFNI | CGCG | 1 cut(s) | 500 |
| BspHI | TCATGA | 1 cut(s) | 231 |
| BspMI | ACCTGC | 3 cut(s) | 97, 348, 2274 |
| BspPI | GGATC | 3 cut(s) | 649, 714, 730 |
| BspQI | GCTCTTC | 1 cut(s) | 347 |
| BspT107I | GGYRCC | 4 cut(s) | 122, 439, 608, 2169 |
| BspTI | CTTAAG | 2 cut(s) | 1375, 2164 |
| BspTNI | GGTCTC | 3 cut(s) | 266, 690, 1505 |
| BsrDI | GCAATG | 2 cut(s) | 960, 2023 |
| BsrFI | RCCGGY | 2 cut(s) | 314, 442 |
| BsrI | ACTGG | 4 cut(s) | 194, 610, 1441, 1949 |
| BssAI | RCCGGY | 2 cut(s) | 314, 442 |
| BssECI | CCNNGG | 3 cut(s) | 199, 988, 1145 |
| BssMI | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| BssNI | GRCGYC | 4 cut(s) | 123, 440, 492, 1077 |
| BssSI | CACGAG | 1 cut(s) | 2197 |
| BssT1I | CCWWGG | 1 cut(s) | 988 |
| Bst2BI | CACGAG | 1 cut(s) | 2197 |
| Bst2UI | CCWGG | 2 cut(s) | 664, 1242 |
| Bst4CI | ACNGT | 6 cut(s) | 701, 1146, 1209, 1555, 1744, 2110 |
| Bst6I | CTCTTC | 4 cut(s) | 347, 576, 780, 1533 |
| BstACI | GRCGYC | 4 cut(s) | 123, 440, 492, 1077 |
| BstAFI | CTTAAG | 2 cut(s) | 1375, 2164 |
| BstC8I | GCNNGC | 8 cut(s) | 316, 369, 454, 1102, 1152, 1192, 1264, 2310 |
| BstDEI | CTNAG | 2 cut(s) | 1326, 1817 |
| BstDSI | CCRYGG | 2 cut(s) | 199, 1145 |
| BstF5I | GGATG | 2 cut(s) | 1554, 2080 |
| BstFNI | CGCG | 1 cut(s) | 500 |
| BstH2I | RGCGCY | 2 cut(s) | 126, 443 |
| BstHHI | GCGC | 3 cut(s) | 125, 442, 502 |
| BstKTI | GATC | 7 cut(s) | 86, 426, 644, 709, 725, 1675, 2204 |
| BstMAI | GTCTC | 5 cut(s) | 266, 690, 1505, 1561, 2111 |
| BstMBI | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 446, 598, 617, 737, 848, 979, 1181, 1187, 2318 |
| BstNI | CCWGG | 2 cut(s) | 664, 1242 |
| BstSCI | CCNGG | 5 cut(s) | 45, 502, 662, 861, 1240 |
| BstSFI | CTRYAG | 1 cut(s) | 1824 |
| BstSLI | GKGCMC | 2 cut(s) | 814, 1906 |
| BstUI | CGCG | 1 cut(s) | 500 |
| BstV1I | GCAGC | 6 cut(s) | 436, 715, 727, 1193, 1507, 1747 |
| BstV2I | GAAGAC | 3 cut(s) | 373, 1121, 1688 |
| BstX2I | RGATCY | 2 cut(s) | 706, 2201 |
| BstYI | RGATCY | 2 cut(s) | 706, 2201 |
| BsuRI | GGCC | 4 cut(s) | 273, 592, 1765, 2321 |
| BtgI | CCRYGG | 2 cut(s) | 199, 1145 |
| BtgZI | GCGATG | 1 cut(s) | 295 |
| BtsCI | GGATG | 2 cut(s) | 1554, 2080 |
| BtsI | GCAGTG | 1 cut(s) | 1641 |
| BtsIMutI | CAGTG | 3 cut(s) | 1317, 1641, 1956 |
| BveI | ACCTGC | 3 cut(s) | 97, 348, 2274 |
| Cac8I | GCNNGC | 8 cut(s) | 316, 369, 454, 1102, 1152, 1192, 1264, 2310 |
| CaiI | CAGNNNCTG | 2 cut(s) | 731, 1748 |
| CciI | TCATGA | 1 cut(s) | 231 |
| CfoI | GCGC | 3 cut(s) | 125, 442, 502 |
| Cfr10I | RCCGGY | 2 cut(s) | 314, 442 |
| Cfr13I | GGNCC | 3 cut(s) | 43, 590, 1763 |
| CseI | GACGC | 4 cut(s) | 405, 481, 506, 1066 |
| Csp6I | GTAC | 4 cut(s) | 223, 909, 1421, 1808 |
| CviAII | CATG | 6 cut(s) | 232, 343, 1496, 1543, 1715, 2239 |
| CviQI | GTAC | 4 cut(s) | 223, 909, 1421, 1808 |
| DdeI | CTNAG | 2 cut(s) | 1326, 1817 |
| DinI | GGCGCC | 2 cut(s) | 124, 441 |
| DpnI | GATC | 7 cut(s) | 85, 425, 643, 708, 724, 1674, 2203 |
| DpnII | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| EaeI | YGGCCR | 1 cut(s) | 2319 |
| Eam1104I | CTCTTC | 4 cut(s) | 347, 576, 780, 1533 |
| EarI | CTCTTC | 4 cut(s) | 347, 576, 780, 1533 |
| Eco130I | CCWWGG | 1 cut(s) | 988 |
| Eco24I | GRGCYC | 2 cut(s) | 458, 868 |
| Eco31I | GGTCTC | 3 cut(s) | 266, 690, 1505 |
| Eco47I | GGWCC | 1 cut(s) | 43 |
| Eco88I | CYCGRG | 1 cut(s) | 73 |
| EcoO109I | RGGNCCY | 1 cut(s) | 43 |
| EcoRII | CCWGG | 2 cut(s) | 662, 1240 |
| EcoT14I | CCWWGG | 1 cut(s) | 988 |
| EcoT38I | GRGCYC | 2 cut(s) | 458, 868 |
| EgeI | GGCGCC | 2 cut(s) | 124, 441 |
| EheI | GGCGCC | 2 cut(s) | 124, 441 |
| ErhI | CCWWGG | 1 cut(s) | 988 |
| FaeI | CATG | 6 cut(s) | 235, 346, 1499, 1546, 1718, 2242 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 227, 259 |
| FatI | CATG | 6 cut(s) | 231, 342, 1495, 1542, 1714, 2238 |
| FauI | CCCGC | 1 cut(s) | 445 |
| FbaI | TGATCA | 1 cut(s) | 423 |
| FblI | GTMKAC | 2 cut(s) | 495, 1162 |
| Fnu4HI | GCNGC | 7 cut(s) | 450, 729, 741, 1003, 1182, 1521, 1736 |
| FokI | GGATG | 2 cut(s) | 1561, 2067 |
| FriOI | GRGCYC | 2 cut(s) | 458, 868 |
| Fsp4HI | GCNGC | 7 cut(s) | 450, 729, 741, 1003, 1182, 1521, 1736 |
| FspBI | CTAG | 3 cut(s) | 2129, 2177, 2273 |
| GlaI | GCGC | 3 cut(s) | 124, 441, 501 |
| GluI | GCNGC | 7 cut(s) | 450, 729, 741, 1003, 1182, 1521, 1736 |
| GsaI | CCCAGC | 2 cut(s) | 735, 1175 |
| GsuI | CTGGAG | 2 cut(s) | 211, 1727 |
| HaeII | RGCGCY | 2 cut(s) | 126, 443 |
| HaeIII | GGCC | 4 cut(s) | 273, 592, 1765, 2321 |
| HgaI | GACGC | 4 cut(s) | 405, 481, 506, 1066 |
| HhaI | GCGC | 3 cut(s) | 125, 442, 502 |
| Hin1I | GRCGYC | 4 cut(s) | 123, 440, 492, 1077 |
| Hin1II | CATG | 6 cut(s) | 235, 346, 1499, 1546, 1718, 2242 |
| Hin6I | GCGC | 3 cut(s) | 123, 440, 500 |
| HinP1I | GCGC | 3 cut(s) | 123, 440, 500 |
| HincII | GTYRAC | 4 cut(s) | 10, 80, 496, 1163 |
| HindII | GTYRAC | 4 cut(s) | 10, 80, 496, 1163 |
| HindIII | AAGCTT | 2 cut(s) | 1015, 1932 |
| HinfI | GANTC | 7 cut(s) | 50, 631, 1322, 1486, 1871, 1967, 2301 |
| HpaI | GTTAAC | 1 cut(s) | 10 |
| HphI | GGTGA | 6 cut(s) | 49, 325, 484, 1354, 2033, 2091 |
| Hpy166II | GTNNAC | 7 cut(s) | 10, 80, 496, 1163, 1478, 1810, 1944 |
| Hpy188I | TCNGA | 8 cut(s) | 870, 1049, 1327, 1677, 1820, 1870, 1990, 2153 |
| Hpy188III | TCNNGA | 6 cut(s) | 232, 685, 704, 1222, 1577, 1706 |
| Hpy8I | GTNNAC | 7 cut(s) | 10, 80, 496, 1163, 1478, 1810, 1944 |
| Hpy99I | CGWCG | 6 cut(s) | 272, 305, 497, 500, 705, 1960 |
| HpyAV | CCTTC | 4 cut(s) | 469, 824, 1786, 2183 |
| HpyCH4III | ACNGT | 6 cut(s) | 701, 1146, 1209, 1555, 1744, 2110 |
| HpyCH4IV | ACGT | 3 cut(s) | 716, 1752, 1812 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 446, 598, 617, 737, 848, 979, 1181, 1187, 2318 |
| HpyF3I | CTNAG | 2 cut(s) | 1326, 1817 |
| HpySE526I | ACGT | 3 cut(s) | 716, 1752, 1812 |
| Hsp92I | GRCGYC | 4 cut(s) | 123, 440, 492, 1077 |
| Hsp92II | CATG | 6 cut(s) | 235, 346, 1499, 1546, 1718, 2242 |
| HspAI | GCGC | 3 cut(s) | 123, 440, 500 |
| KasI | GGCGCC | 2 cut(s) | 122, 439 |
| KroI | GCCGGC | 1 cut(s) | 314 |
| KroNI | GCCGGC | 1 cut(s) | 316 |
| Ksp22I | TGATCA | 1 cut(s) | 423 |
| KspAI | GTTAAC | 1 cut(s) | 10 |
| Kzo9I | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| LguI | GCTCTTC | 1 cut(s) | 347 |
| LmnI | GCTCC | 4 cut(s) | 461, 864, 1408, 2317 |
| Lsp1109I | GCAGC | 6 cut(s) | 436, 715, 727, 1193, 1507, 1747 |
| MaeI | CTAG | 3 cut(s) | 2129, 2177, 2273 |
| MaeII | ACGT | 3 cut(s) | 716, 1752, 1812 |
| MaeIII | GTNAC | 8 cut(s) | 712, 1214, 1244, 1360, 1432, 1756, 2021, 2124 |
| MalI | GATC | 7 cut(s) | 85, 425, 643, 708, 724, 1674, 2203 |
| MboI | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| MfeI | CAATTG | 2 cut(s) | 852, 1200 |
| MflI | RGATCY | 2 cut(s) | 706, 2201 |
| MhlI | GDGCHC | 6 cut(s) | 458, 814, 861, 868, 1906, 1964 |
| Mly113I | GGCGCC | 2 cut(s) | 123, 440 |
| MlyI | GAGTC | 1 cut(s) | 640 |
| MmeI | TCCRAC | 3 cut(s) | 363, 1441, 2040 |
| MroNI | GCCGGC | 1 cut(s) | 314 |
| MroXI | GAANNNNTTC | 5 cut(s) | 173, 239, 511, 671, 1934 |
| MslI | CAYNNNNRTG | 6 cut(s) | 230, 606, 799, 1251, 1547, 1949 |
| MspA1I | CMGCKG | 4 cut(s) | 728, 842, 1175, 1738 |
| MspCI | CTTAAG | 2 cut(s) | 1375, 2164 |
| MspR9I | CCNGG | 5 cut(s) | 47, 504, 664, 863, 1242 |
| MunI | CAATTG | 2 cut(s) | 852, 1200 |
| MvaI | CCWGG | 2 cut(s) | 664, 1242 |
| MvnI | CGCG | 1 cut(s) | 500 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 446, 598, 617, 737, 848, 979, 1181, 1187, 2318 |
| NaeI | GCCGGC | 1 cut(s) | 316 |
| NarI | GGCGCC | 2 cut(s) | 123, 440 |
| NciI | CCSGG | 3 cut(s) | 47, 504, 863 |
| NdeII | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| NgoMIV | GCCGGC | 1 cut(s) | 314 |
| NlaIII | CATG | 6 cut(s) | 235, 346, 1499, 1546, 1718, 2242 |
| NmuCI | GTSAC | 5 cut(s) | 1244, 1360, 1432, 2021, 2124 |
| OliI | CACNNNNGTG | 1 cut(s) | 1949 |
| PagI | TCATGA | 1 cut(s) | 231 |
| PaqCI | CACCTGC | 1 cut(s) | 2274 |
| PciSI | GCTCTTC | 1 cut(s) | 347 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 147 |
| PdiI | GCCGGC | 1 cut(s) | 316 |
| PdmI | GAANNNNTTC | 5 cut(s) | 173, 239, 511, 671, 1934 |
| PfeI | GAWTC | 6 cut(s) | 50, 1322, 1486, 1871, 1967, 2301 |
| PflFI | GACNNNGTC | 1 cut(s) | 2122 |
| PkrI | GCNGC | 7 cut(s) | 451, 730, 742, 1004, 1183, 1522, 1737 |
| PleI | GAGTC | 1 cut(s) | 639 |
| PluTI | GGCGCC | 2 cut(s) | 126, 443 |
| PpsI | GAGTC | 1 cut(s) | 639 |
| PpuMI | RGGWCCY | 1 cut(s) | 43 |
| PshBI | ATTAAT | 1 cut(s) | 68 |
| PsiI | TTATAA | 1 cut(s) | 1086 |
| Psp5II | RGGWCCY | 1 cut(s) | 43 |
| Psp6I | CCWGG | 2 cut(s) | 662, 1240 |
| PspFI | CCCAGC | 2 cut(s) | 731, 1171 |
| PspGI | CCWGG | 2 cut(s) | 662, 1240 |
| PspPI | GGNCC | 3 cut(s) | 43, 590, 1763 |
| PspPPI | RGGWCCY | 1 cut(s) | 43 |
| PstNI | CAGNNNCTG | 2 cut(s) | 731, 1748 |
| PsuI | RGATCY | 2 cut(s) | 706, 2201 |
| PsyI | GACNNNGTC | 1 cut(s) | 2122 |
| PvuII | CAGCTG | 4 cut(s) | 728, 842, 1175, 1738 |
| RsaI | GTAC | 4 cut(s) | 224, 910, 1422, 1809 |
| RsaNI | GTAC | 4 cut(s) | 223, 909, 1421, 1808 |
| RseI | CAYNNNNRTG | 6 cut(s) | 230, 606, 799, 1251, 1547, 1949 |
| SalI | GTCGAC | 2 cut(s) | 494, 1161 |
| SapI | GCTCTTC | 1 cut(s) | 347 |
| SatI | GCNGC | 7 cut(s) | 450, 729, 741, 1003, 1182, 1521, 1736 |
| Sau3AI | GATC | 7 cut(s) | 83, 423, 641, 706, 722, 1672, 2201 |
| Sau96I | GGNCC | 3 cut(s) | 43, 590, 1763 |
| SchI | GAGTC | 1 cut(s) | 640 |
| ScrFI | CCNGG | 5 cut(s) | 47, 504, 664, 863, 1242 |
| SduI | GDGCHC | 6 cut(s) | 458, 814, 861, 868, 1906, 1964 |
| SfcI | CTRYAG | 1 cut(s) | 1824 |
| SfoI | GGCGCC | 2 cut(s) | 124, 441 |
| SgrDI | CGTCGACG | 1 cut(s) | 494 |
| SinI | GGWCC | 1 cut(s) | 43 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 230, 606, 799, 1251, 1547, 1949 |
| SmlI | CTYRAG | 2 cut(s) | 1375, 2164 |
| SmoI | CTYRAG | 2 cut(s) | 1375, 2164 |
| SsiI | CCGC | 6 cut(s) | 60, 452, 557, 1002, 1862, 1978 |
| SspDI | GGCGCC | 2 cut(s) | 122, 439 |
| SspI | AATATT | 1 cut(s) | 510 |
| SspMI | CTAG | 3 cut(s) | 2129, 2177, 2273 |
| StyD4I | CCNGG | 5 cut(s) | 45, 502, 662, 861, 1240 |
| StyI | CCWWGG | 1 cut(s) | 988 |
| TaaI | ACNGT | 6 cut(s) | 701, 1146, 1209, 1555, 1744, 2110 |
| TaiI | ACGT | 3 cut(s) | 719, 1755, 1815 |
| TaqI | TCGA | 6 cut(s) | 141, 150, 303, 495, 1162, 1484 |
| TatI | WGTACW | 2 cut(s) | 222, 1807 |
| TauI | GCSGC | 1 cut(s) | 1005 |
| TfiI | GAWTC | 6 cut(s) | 50, 1322, 1486, 1871, 1967, 2301 |
| TscAI | CASTG | 3 cut(s) | 1324, 1648, 1956 |
| TseFI | GTSAC | 5 cut(s) | 1244, 1360, 1432, 2021, 2124 |
| TseI | GCWGC | 6 cut(s) | 449, 728, 740, 1181, 1520, 1735 |
| Tsp45I | GTSAC | 5 cut(s) | 1244, 1360, 1432, 2021, 2124 |
| TspDTI | ATGAA | 6 cut(s) | 220, 248, 1322, 1697, 2059, 2227 |
| TspGWI | ACGGA | 2 cut(s) | 740, 1889 |
| TspRI | CASTG | 3 cut(s) | 1324, 1648, 1956 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2122 |
| Vha464I | CTTAAG | 2 cut(s) | 1375, 2164 |
| VpaK11BI | GGWCC | 1 cut(s) | 43 |
| VspI | ATTAAT | 1 cut(s) | 68 |
| XapI | RAATTY | 1 cut(s) | 323 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1238 |
| XmiI | GTMKAC | 2 cut(s) | 495, 1162 |
| XmnI | GAANNNNTTC | 5 cut(s) | 173, 239, 511, 671, 1934 |
| XspI | CTAG | 3 cut(s) | 2129, 2177, 2273 |