MD02G1037000.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
2796503 .. 2797870
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1037000.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGAAGGACAGAAAAGCTAACATAGTAGCTTCATCGTCGATCATCGCGCTCGTTGTTTTTATACTCGTTGCGCGAATCACTCTCAAACTTTCGCCAACTTTCTTCCTCATTTGCGGGGCAGGTGTTGCTGTGATCCTTGCTGTGTTTGTATGGCTAGCGATCAGACACCATTACAATTGCCGGAGAAAGCTCTTGGAATCAAAATACGCGTCAGAAGGAAAGGAACTTCGCATGGAGTATAGTTTTCTTCGAAAAGTTGCGGGGGTTCCCACGAAGTTTAGGTACAAGGAGATAGAGGATGCAACAGATCATTTCAAGGCATTGCTTGGGAAAGGGGCTTCAGCTTCTGTTTACAAAGGGATCCTAAGTGATGGGACTCAAGTGGCAGTGAAAAAGCTCGATGTAGAGGAGCGCGGCGAGAGGGAGTTCAGGTCAGAAGTTGCGGCGATTACAAGCCTGCAACATATCAATCTTGTGCGCCTTCTCGGGTATTGTTGTGTTCCTGCAGGACCACGATTCTTGGTTTATGATTTCATCCCAAATGGATCGTTGGATTCTTGGATTTTCTCTCAGAAGGGAAGGCCTAATCGACGTGGGGGGTGCTTGCCTTGGGACACAAGGTACAGGGTTGCAGTTGACGTTGCTAGAGCGCTTTCTTACCTGCATCGTGATTGCAGGTCAAGGATTTTGCACCTTGATGTGAAGCCAGAGAACATCCTTTTGGACGAGAATTACAGAGCAATTGTCGCGGATTTTGGCCTTTCGAAGTTAATGGGAAAAGACGAGAGTAGAATCATGATCACGATTCGGGGGACCAGGGGCTACTTGGCTCCTGAGTGGCTCTTGGAGCATGGAATTTCCGAAAAAACAGATGTGTACAGTTACGGAATGGTGCTTCTTGAGATGATCGGAGGGCGGAGAAACATTAGCTTCGTCGAAAAGGGCAATGCCACCAACAAGTCCCAGAGGAAAGGGGAGTATTTTCCCAAAATTGTGATCGAGAAAATGGGAGAAGGTAAGCTTATGGAAGTTGTTGATCAAAGGCTGATCGAAAGTGGACGCGTTGACGAAAGGGAGGTAAAAAAACTTGTTCATATAGCTCTATGGTGCGTACAAGAGAGGGCTAGGCTTAGGCCTACCATGTCACATGTGGTGGAGATGCTTGAGGGCCGGACGCCCGTGGAGGAGCCTCCCGACACCCAAATGGTGGTTGTTGATTTTTTGGCGATGGACGACGAGACGAATGACGGCAACAAGAGGGCAAAGATTGGTAGTGCAGCCTTGGCAACACAAGAAGTAGAGAGCAATGATGCATCCACATCAACATGTTCATATGGAAATGCAATGTCCATGATAGCCCCAAGATAG

Protein Analysis

456

Amino Acids

51.21

Weight (kDa)

9.07

Isoelectric Point (pI)

36.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 105 - 388 4.8e-37 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 106 - 386 1.2e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016643)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20050
fragaria_vesca FvH4_1g03860
malus_domestica MD02G1037000.v1.1 MD15G1177100.v1.1
prunus_persica Prupe.7G238400_v2.0.a1 Prupe.7G238400_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0089251
rosa_laevigata RLG00000016008
rosa_multiflora Rmu_sc0008322.1_g000020
rosa_rugosa Rorug01G0488600
rosa_samantha Rh2AG044600 Rh2BG043300 Rh2DG043600
rosa_wichuraiana Rw2G003860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 110
Acc36I ACCTGC 3 cut(s) 110, 666, 669
AccB7I CCANNNNNTGG 1 cut(s) 1207
AccII CGCG 6 cut(s) 47, 73, 209, 414, 749, 1062
AciI CCGC 6 cut(s) 114, 260, 414, 443, 749, 916
AclWI GGATC 4 cut(s) 127, 355, 368, 553
AcsI RAATTY 1 cut(s) 855
AcuI CTGAAG 1 cut(s) 324
AcyI GRCGYC 1 cut(s) 1175
AfaI GTAC 4 cut(s) 284, 623, 878, 1113
AfeI AGCGCT 1 cut(s) 651
AfiI CCNNNNNNNGG 1 cut(s) 1207
AflIII ACRYGT 4 cut(s) 207, 1060, 1147, 1325
AgsI TTSAA 1 cut(s) 316
AjiI CACGTC 1 cut(s) 593
AjnI CCWGG 1 cut(s) 815
AjuI GAANNNNNNNTTGG 2 cut(s) 704, 736
AluBI AGCT 8 cut(s) 17, 29, 190, 344, 397, 930, 1021, 1100
AluI AGCT 8 cut(s) 17, 29, 190, 344, 397, 930, 1021, 1100
Alw26I GTCTC 1 cut(s) 1232
AlwI GGATC 4 cut(s) 127, 355, 368, 553
AlwNI CAGNNNCTG 1 cut(s) 347
Ama87I CYCGRG 1 cut(s) 485
Aor51HI AGCGCT 1 cut(s) 651
AoxI GGCC 4 cut(s) 581, 757, 1133, 1168
ApeKI GCWGC 1 cut(s) 1277
ApoI RAATTY 1 cut(s) 855
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AspLEI GCGC 5 cut(s) 49, 73, 414, 480, 652
AspS9I GGNCC 3 cut(s) 509, 813, 1168
AsuII TTCGAA 2 cut(s) 250, 764
AsuNHI GCTAGC 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 485
AvaII GGWCC 2 cut(s) 509, 813
BamHI GGATCC 1 cut(s) 360
BarI GAAGNNNNNNTAC 2 cut(s) 266, 298
BbvI GCAGC 1 cut(s) 1289
BccI CCATC 2 cut(s) 365, 1222
BceAI ACGGC 1 cut(s) 1264
BciT130I CCWGG 1 cut(s) 817
BclI TGATCA 2 cut(s) 798, 1036
BcoDI GTCTC 1 cut(s) 1232
BfaI CTAG 3 cut(s) 155, 645, 1125
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 1 cut(s) 653
BfuAI ACCTGC 3 cut(s) 110, 666, 669
BisI GCNGC 3 cut(s) 415, 444, 1278
BlsI GCNGC 3 cut(s) 416, 445, 1279
Bme1390I CCNGG 1 cut(s) 817
Bme18I GGWCC 2 cut(s) 509, 813
BmeT110I CYCGRG 1 cut(s) 485
BmgBI CACGTC 1 cut(s) 593
BmgT120I GGNCC 3 cut(s) 509, 813, 1168
BmiI GGNNCC 5 cut(s) 267, 362, 814, 831, 1188
BmrFI CCNGG 1 cut(s) 817
BmsI GCATC 5 cut(s) 289, 673, 1149, 1300, 1322
BmtI GCTAGC 1 cut(s) 158
Bpu10I CCTNAGC 1 cut(s) 1130
Bpu14I TTCGAA 2 cut(s) 250, 764
BpuEI CTTGAG 3 cut(s) 363, 920, 1184
BsaHI GRCGYC 1 cut(s) 1175
BsaJI CCNNGG 4 cut(s) 608, 816, 1179, 1281
BsaXI ACNNNNNCTCC 2 cut(s) 416, 446
Bsc4I CCNNNNNNNGG 1 cut(s) 1207
Bse3DI GCAATG 4 cut(s) 320, 952, 1312, 1350
BseBI CCWGG 1 cut(s) 817
BseDI CCNNGG 4 cut(s) 608, 816, 1179, 1281
BseGI GGATG 4 cut(s) 304, 534, 714, 1313
BseLI CCNNNNNNNGG 1 cut(s) 1207
BseMI GCAATG 4 cut(s) 320, 952, 1312, 1350
BseMII CTCAG 2 cut(s) 584, 825
BseRI GAGGAG 2 cut(s) 422, 1199
BseXI GCAGC 1 cut(s) 1289
BsgI GTGCAG 1 cut(s) 1296
Bsh1236I CGCG 6 cut(s) 47, 73, 209, 414, 749, 1062
BshFI GGCC 4 cut(s) 583, 759, 1135, 1170
BsiHKCI CYCGRG 1 cut(s) 485
BsiSI CCGG 2 cut(s) 181, 1171
BslFI GGGAC 4 cut(s) 388, 626, 826, 946
BslI CCNNNNNNNGG 1 cut(s) 1207
BsmAI GTCTC 1 cut(s) 1232
BsmBI CGTCTC 1 cut(s) 1232
BsmFI GGGAC 4 cut(s) 388, 626, 826, 946
BsnI GGCC 4 cut(s) 583, 759, 1135, 1170
BsoBI CYCGRG 1 cut(s) 485
Bsp119I TTCGAA 2 cut(s) 250, 764
Bsp1407I TGTACA 1 cut(s) 876
BspACI CCGC 6 cut(s) 114, 260, 414, 443, 749, 916
BspANI GGCC 4 cut(s) 583, 759, 1135, 1170
BspCNI CTCAG 2 cut(s) 583, 826
BspFNI CGCG 6 cut(s) 47, 73, 209, 414, 749, 1062
BspHI TCATGA 1 cut(s) 795
BspLI GGNNCC 5 cut(s) 267, 362, 814, 831, 1188
BspMAI CTGCAG 1 cut(s) 508
BspMI ACCTGC 3 cut(s) 110, 666, 669
BspOI GCTAGC 1 cut(s) 158
BspPI GGATC 4 cut(s) 127, 355, 368, 553
BspT104I TTCGAA 2 cut(s) 250, 764
BsrDI GCAATG 4 cut(s) 320, 952, 1312, 1350
BsrGI TGTACA 1 cut(s) 876
BssECI CCNNGG 4 cut(s) 608, 816, 1179, 1281
BssNI GRCGYC 1 cut(s) 1175
BssT1I CCWWGG 2 cut(s) 608, 1281
Bst2UI CCWGG 1 cut(s) 817
Bst4CI ACNGT 1 cut(s) 881
BstACI GRCGYC 1 cut(s) 1175
BstAPI GCANNNNNTGC 1 cut(s) 125
BstAUI TGTACA 1 cut(s) 876
BstBI TTCGAA 2 cut(s) 250, 764
BstC8I GCNNGC 3 cut(s) 156, 458, 605
BstDEI CTNAG 4 cut(s) 365, 570, 834, 1130
BstDSI CCRYGG 1 cut(s) 1179
BstF5I GGATG 4 cut(s) 304, 534, 714, 1313
BstFNI CGCG 6 cut(s) 47, 73, 209, 414, 749, 1062
BstH2I RGCGCY 1 cut(s) 653
BstHHI GCGC 5 cut(s) 49, 73, 414, 480, 652
BstMAI GTCTC 1 cut(s) 1232
BstMWI GCNNNNNNNGC 4 cut(s) 125, 746, 847, 1283
BstNI CCWGG 1 cut(s) 817
BstNSI RCATGY 2 cut(s) 1151, 1329
BstSCI CCNGG 1 cut(s) 815
BstSFI CTRYAG 1 cut(s) 504
BstUI CGCG 6 cut(s) 47, 73, 209, 414, 749, 1062
BstV1I GCAGC 1 cut(s) 1289
BstX2I RGATCY 1 cut(s) 360
BstYI RGATCY 1 cut(s) 360
BsuRI GGCC 4 cut(s) 583, 759, 1135, 1170
BtgI CCRYGG 1 cut(s) 1179
BtgZI GCGATG 2 cut(s) 28, 1241
BtrI CACGTC 1 cut(s) 593
BtsCI GGATG 4 cut(s) 304, 534, 714, 1313
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 1 cut(s) 393
BveI ACCTGC 3 cut(s) 110, 666, 669
Cac8I GCNNGC 3 cut(s) 156, 458, 605
CaiI CAGNNNCTG 1 cut(s) 347
CciI TCATGA 1 cut(s) 795
CfoI GCGC 5 cut(s) 49, 73, 414, 480, 652
Cfr13I GGNCC 3 cut(s) 509, 813, 1168
CseI GACGC 3 cut(s) 198, 1068, 1183
Csp6I GTAC 4 cut(s) 283, 622, 877, 1112
CspCI CAANNNNNGTGG 2 cut(s) 501, 536
CviAII CATG 7 cut(s) 232, 796, 851, 1141, 1148, 1326, 1351
CviQI GTAC 4 cut(s) 283, 622, 877, 1112
DdeI CTNAG 4 cut(s) 365, 570, 834, 1130
EciI GGCGGA 1 cut(s) 931
Eco130I CCWWGG 2 cut(s) 608, 1281
Eco147I AGGCCT 2 cut(s) 583, 1135
Eco47I GGWCC 2 cut(s) 509, 813
Eco47III AGCGCT 1 cut(s) 651
Eco57I CTGAAG 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 485
EcoRII CCWGG 1 cut(s) 815
EcoT14I CCWWGG 2 cut(s) 608, 1281
EcoT22I ATGCAT 1 cut(s) 1315
ErhI CCWWGG 2 cut(s) 608, 1281
Esp3I CGTCTC 1 cut(s) 1232
FaeI CATG 7 cut(s) 235, 799, 854, 1144, 1151, 1329, 1354
FalI AAGNNNNNCTT 2 cut(s) 1005, 1037
FaqI GGGAC 4 cut(s) 388, 626, 826, 946
FatI CATG 7 cut(s) 231, 795, 850, 1140, 1147, 1325, 1350
FauI CCCGC 2 cut(s) 107, 253
FauNDI CATATG 1 cut(s) 1333
FbaI TGATCA 2 cut(s) 798, 1036
Fnu4HI GCNGC 3 cut(s) 415, 444, 1278
FokI GGATG 4 cut(s) 311, 521, 701, 1300
Fsp4HI GCNGC 3 cut(s) 415, 444, 1278
FspBI CTAG 3 cut(s) 155, 645, 1125
GlaI GCGC 5 cut(s) 48, 72, 413, 479, 651
GluI GCNGC 3 cut(s) 415, 444, 1278
HaeII RGCGCY 1 cut(s) 653
HaeIII GGCC 4 cut(s) 583, 759, 1135, 1170
HapII CCGG 2 cut(s) 181, 1171
HgaI GACGC 3 cut(s) 198, 1068, 1183
HhaI GCGC 5 cut(s) 49, 73, 414, 480, 652
Hin1I GRCGYC 1 cut(s) 1175
Hin1II CATG 7 cut(s) 235, 799, 854, 1144, 1151, 1329, 1354
Hin6I GCGC 5 cut(s) 47, 71, 412, 478, 650
HinP1I GCGC 5 cut(s) 47, 71, 412, 478, 650
HincII GTYRAC 2 cut(s) 637, 1066
HindII GTYRAC 2 cut(s) 637, 1066
HindIII AAGCTT 1 cut(s) 1019
HinfI GANTC 7 cut(s) 75, 197, 376, 516, 554, 792, 805
HpaII CCGG 2 cut(s) 181, 1171
Hpy166II GTNNAC 5 cut(s) 352, 637, 877, 1058, 1066
Hpy188I TCNGA 6 cut(s) 164, 214, 436, 573, 862, 911
Hpy188III TCNNGA 7 cut(s) 668, 796, 802, 833, 899, 1000, 1193
Hpy8I GTNNAC 5 cut(s) 352, 637, 877, 1058, 1066
Hpy99I CGWCG 4 cut(s) 40, 594, 938, 1238
HpyAV CCTTC 5 cut(s) 209, 491, 568, 573, 1007
HpyCH4III ACNGT 1 cut(s) 881
HpyCH4IV ACGT 2 cut(s) 592, 639
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 746, 847, 1283
HpyF3I CTNAG 4 cut(s) 365, 570, 834, 1130
HpySE526I ACGT 2 cut(s) 592, 639
Hsp92I GRCGYC 1 cut(s) 1175
Hsp92II CATG 7 cut(s) 235, 799, 854, 1144, 1151, 1329, 1354
HspAI GCGC 5 cut(s) 47, 71, 412, 478, 650
Ksp22I TGATCA 2 cut(s) 798, 1036
LmnI GCTCC 4 cut(s) 409, 835, 847, 1186
Lsp1109I GCAGC 1 cut(s) 1289
LweI GCATC 5 cut(s) 289, 673, 1149, 1300, 1322
MaeI CTAG 3 cut(s) 155, 645, 1125
MaeII ACGT 2 cut(s) 592, 639
MaeIII GTNAC 2 cut(s) 881, 1143
MboII GAAGA 2 cut(s) 94, 239
MfeI CAATTG 2 cut(s) 175, 741
MflI RGATCY 1 cut(s) 360
MluCI AATT 5 cut(s) 175, 730, 741, 855, 990
MluI ACGCGT 2 cut(s) 207, 1060
MlyI GAGTC 1 cut(s) 370
MmeI TCCRAC 1 cut(s) 531
Mph1103I ATGCAT 1 cut(s) 1315
MseI TTAA 1 cut(s) 770
MslI CAYNNNNRTG 3 cut(s) 696, 1202, 1324
MspI CCGG 2 cut(s) 181, 1171
MspR9I CCNGG 1 cut(s) 817
MunI CAATTG 2 cut(s) 175, 741
MvaI CCWGG 1 cut(s) 817
MvnI CGCG 6 cut(s) 47, 73, 209, 414, 749, 1062
MwoI GCNNNNNNNGC 4 cut(s) 125, 746, 847, 1283
NdeI CATATG 1 cut(s) 1333
NheI GCTAGC 1 cut(s) 154
NlaIII CATG 7 cut(s) 235, 799, 854, 1144, 1151, 1329, 1354
NlaIV GGNNCC 5 cut(s) 267, 362, 814, 831, 1188
NmuCI GTSAC 1 cut(s) 1143
NsiI ATGCAT 1 cut(s) 1315
NspI RCATGY 2 cut(s) 1151, 1329
NspV TTCGAA 2 cut(s) 250, 764
PagI TCATGA 1 cut(s) 795
PaqCI CACCTGC 1 cut(s) 110
PceI AGGCCT 2 cut(s) 583, 1135
PciI ACATGT 2 cut(s) 1147, 1325
PfeI GAWTC 6 cut(s) 75, 197, 516, 554, 792, 805
PflMI CCANNNNNTGG 1 cut(s) 1207
PkrI GCNGC 3 cut(s) 416, 445, 1279
PleI GAGTC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 370
PscI ACATGT 2 cut(s) 1147, 1325
Psp6I CCWGG 1 cut(s) 815
PspGI CCWGG 1 cut(s) 815
PspN4I GGNNCC 5 cut(s) 267, 362, 814, 831, 1188
PspPI GGNCC 3 cut(s) 509, 813, 1168
PstI CTGCAG 1 cut(s) 508
PstNI CAGNNNCTG 1 cut(s) 347
PsuI RGATCY 1 cut(s) 360
RsaI GTAC 4 cut(s) 284, 623, 878, 1113
RsaNI GTAC 4 cut(s) 283, 622, 877, 1112
RseI CAYNNNNRTG 3 cut(s) 696, 1202, 1324
SaqAI TTAA 1 cut(s) 770
SatI GCNGC 3 cut(s) 415, 444, 1278
Sau96I GGNCC 3 cut(s) 509, 813, 1168
SbfI CCTGCAGG 1 cut(s) 508
SchI GAGTC 1 cut(s) 370
ScrFI CCNGG 1 cut(s) 817
SdaI CCTGCAGG 1 cut(s) 508
SfaNI GCATC 5 cut(s) 289, 673, 1149, 1300, 1322
SfcI CTRYAG 1 cut(s) 504
SfuI TTCGAA 2 cut(s) 250, 764
SinI GGWCC 2 cut(s) 509, 813
SmiMI CAYNNNNRTG 3 cut(s) 696, 1202, 1324
SmlI CTYRAG 3 cut(s) 378, 899, 1163
SmoI CTYRAG 3 cut(s) 378, 899, 1163
Sse8387I CCTGCAGG 1 cut(s) 508
Sse9I AATT 5 cut(s) 175, 730, 741, 855, 990
SseBI AGGCCT 2 cut(s) 583, 1135
SsiI CCGC 6 cut(s) 114, 260, 414, 443, 749, 916
SspMI CTAG 3 cut(s) 155, 645, 1125
StuI AGGCCT 2 cut(s) 583, 1135
StyD4I CCNGG 1 cut(s) 815
StyI CCWWGG 2 cut(s) 608, 1281
TaaI ACNGT 1 cut(s) 881
TaiI ACGT 2 cut(s) 595, 642
TaqI TCGA 8 cut(s) 38, 250, 399, 589, 764, 936, 999, 1050
TasI AATT 5 cut(s) 175, 730, 741, 855, 990
TatI WGTACW 1 cut(s) 876
TauI GCSGC 2 cut(s) 417, 446
TfiI GAWTC 6 cut(s) 75, 197, 516, 554, 792, 805
Tru1I TTAA 1 cut(s) 770
Tru9I TTAA 1 cut(s) 770
TscAI CASTG 1 cut(s) 393
TseFI GTSAC 1 cut(s) 1143
TseI GCWGC 1 cut(s) 1277
Tsp45I GTSAC 1 cut(s) 1143
TspDTI ATGAA 5 cut(s) 17, 21, 523, 1082, 1320
TspGWI ACGGA 1 cut(s) 900
TspRI CASTG 1 cut(s) 393
Van91I CCANNNNNTGG 1 cut(s) 1207
VpaK11BI GGWCC 2 cut(s) 509, 813
XapI RAATTY 1 cut(s) 855
XceI RCATGY 2 cut(s) 1151, 1329
XcmI CCANNNNNNNNNTGG 2 cut(s) 823, 1147
XspI CTAG 3 cut(s) 155, 645, 1125
Zsp2I ATGCAT 1 cut(s) 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.