Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0016643

Physical Location & Seq

Genomic Coordinates Forward (+)

20605566 .. 20607480

Gene Structure 1915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G238400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGAGGACAAAAAAGCTAACATAGTAGCTGCATCATCAGTTATCACCCTCATCATCTTCATAATTGTTGCTCGTGTCTCTCTCAAACTTTCCCCTACTTTCTTTCTCATTTGTGGGGCAGGTATTGCTGTGATCCTTGCTGTGTTTGCATGGCTTATAATCAGACACCATTACAATTGCAGGCGAAAGCTGATGGAATCAAATTACGCATCAGAAGGCCGTGAGCTGCGAATAGAGTACAGTTTCCTTAGAAGAGTTGCTGGTGTTCCCACAAAGTTTAGGTACAAAGAGCTGGAGGATGCGACAGACCATTTTCAGGCATTGCTTGGCAAAGGGGCTTCTGCTTCTGTTTACAAAGGGATCCTTAGTGATGGCACTCCTGTGGCAGTCAAAAAGCTTGATGCTGAAGAGCGCCGCGAGAAGGAATTCAGATCAGAAGTTGCAGCAATTGCTAGCCTGCAACATGTCAATCTTGTGCGCCTTCTCGGTTATTGTTGTGTTCCTGCAGGACCTCGTTTCTTGGTCTATGATTTCATCTCAAATGGATCATTGGATTCTTGGATTTTCTCTAGAAAGGAAAGGCCTAACCGGCGTGGGGGTTGCTTGTCTTGGGATTTAAGGTACAGGGTTGCTGTTGATGTTGCTAAGGCACTTTCTTATCTGCATCATGATTGCAGGTCAAGGATTTTGCACCTTGATGTTAAGCCAGAGAATATACTCTTGGATGAGAGTTACAGGGCAGTTGTGGCAGATTTTGGTCTGTCAAAGCTAATGGGAAAAGATGAGAGTAAAATTATGATAACGATCCGAGGCACTAGAGGTTACTTAGCCCCTGAGTGGCTCTTGGAGCATGGAATTTCAGAGAAATCTGATGTCTATAGTTATGGAATGGTTCTGCTGGAGATGATCGGAGGCCGAAGAAACATCAGCTTCGTCGAAAAAGGGAATGACAGGTCTCAAAGGAAACGGCAGTATTTTCCCAAAACTGTGAGTGAGAAAATGAGAGAAGGAAAGCTTATGGAAGTTGTTGATCAAAGGCTAATAGAAAGTGGAGGTATTGATGAAAGGGAGGTTAAAAAACTGGTTCTCATAGCTCTCTGGTGCATACAAGAGAGGGCTAGGCTTAGGCCTAGCATGTCTCATGTGGTTGATATGCTTGAAGGCCGTGTGACAGTGGAGGAGCCTCCTGACACACATATGGTGGTGGTTGATTTTTTGGCAATAGATGAAGATCCAGCAAATGGTCATGAGAGGCCAAAGATTGCTGCTGCATTGGCAGCAAAACAATTTGATTGCAAAGATGCTTCCACATCAACATGCTCATATGCAAATACAATGTCTTCGATATCCCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

453

Amino Acids

51.05

Weight (kDa)

8.97

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20050
fragaria_vesca	FvH4_1g03860
malus_domestica	MD02G1037000.v1.1 MD15G1177100.v1.1
prunus_persica	Prupe.7G238400_v2.0.a1 Prupe.7G238400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0089251
rosa_laevigata	RLG00000016008
rosa_multiflora	Rmu_sc0008322.1_g000020
rosa_rugosa	Rorug01G0488600
rosa_samantha	Rh2AG044600 Rh2BG043300 Rh2DG043600
rosa_wichuraiana	Rw2G003860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	158
Acc36I	ACCTGC	2 cut(s)	110, 666
AccB7I	CCANNNNNTGG	1 cut(s)	1241
AccII	CGCG	1 cut(s)	417
AciI	CCGC	1 cut(s)	415
AclWI	GGATC	6 cut(s)	127, 355, 368, 553, 799, 1226
AcsI	RAATTY	2 cut(s)	425, 855
AcuI	CTGAAG	1 cut(s)	426
AfaI	GTAC	3 cut(s)	239, 284, 623
AfiI	CCNNNNNNNGG	5 cut(s)	316, 421, 595, 837, 1241
AflIII	ACRYGT	1 cut(s)	463
AgsI	TTSAA	1 cut(s)	1160
AjuI	GAANNNNNNNTTGG	2 cut(s)	704, 736
AleI	CACNNNNGTG	1 cut(s)	380
Alw26I	GTCTC	3 cut(s)	82, 960, 1143
AlwI	GGATC	6 cut(s)	127, 355, 368, 553, 799, 1226
AoxI	GGCC	6 cut(s)	217, 581, 913, 1127, 1162, 1253
ApeKI	GCWGC	6 cut(s)	29, 226, 443, 1265, 1268, 1277
ApoI	RAATTY	2 cut(s)	425, 855
ArsI	GACNNNNNNTTYG	2 cut(s)	1322, 1354
Asp700I	GAANNNNTTC	1 cut(s)	425
AspLEI	GCGC	2 cut(s)	414, 480
AspS9I	GGNCC	1 cut(s)	509
AsuHPI	GGTGA	1 cut(s)	37
AsuNHI	GCTAGC	1 cut(s)	452
AvaII	GGWCC	1 cut(s)	509
BamHI	GGATCC	1 cut(s)	360
BauI	CACGAG	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	1332
BbvI	GCAGC	6 cut(s)	16, 213, 455, 1252, 1255, 1289
BccI	CCATC	2 cut(s)	187, 365
BceAI	ACGGC	3 cut(s)	204, 983, 1149
BclI	TGATCA	1 cut(s)	1030
BcoDI	GTCTC	3 cut(s)	82, 960, 1143
BfaI	CTAG	5 cut(s)	453, 570, 816, 1119, 1131
BfmI	CTRYAG	2 cut(s)	504, 877
BfoI	RGCGCY	1 cut(s)	415
BfuAI	ACCTGC	2 cut(s)	110, 666
BglI	GCCNNNNNGGC	1 cut(s)	589
BisI	GCNGC	7 cut(s)	30, 227, 415, 444, 1266, 1269, 1278
BlsI	GCNGC	7 cut(s)	31, 228, 416, 445, 1267, 1270, 1279
Bme18I	GGWCC	1 cut(s)	509
BmgT120I	GGNCC	1 cut(s)	509
BmiI	GGNNCC	2 cut(s)	362, 1182
BmsI	GCATC	6 cut(s)	41, 218, 289, 391, 673, 1291
BmtI	GCTAGC	1 cut(s)	456
BpiI	GAAGAC	1 cut(s)	1332
BpmI	CTGGAG	2 cut(s)	314, 920
Bpu10I	CCTNAGC	2 cut(s)	645, 1124
BsaBI	GATNNNNATC	2 cut(s)	803, 1230
BsaI	GGTCTC	1 cut(s)	960
BsaJI	CCNNGG	1 cut(s)	808
Bsc4I	CCNNNNNNNGG	5 cut(s)	316, 421, 595, 837, 1241
Bse118I	RCCGGY	1 cut(s)	588
Bse1I	ACTGG	1 cut(s)	1086
Bse3DI	GCAATG	1 cut(s)	320
Bse8I	GATNNNNATC	2 cut(s)	803, 1230
BseDI	CCNNGG	1 cut(s)	808
BseGI	GGATG	2 cut(s)	304, 730
BseJI	GATNNNNATC	2 cut(s)	803, 1230
BseLI	CCNNNNNNNGG	5 cut(s)	316, 421, 595, 837, 1241
BseMI	GCAATG	1 cut(s)	320
BseMII	CTCAG	1 cut(s)	825
BseNI	ACTGG	1 cut(s)	1086
BseRI	GAGGAG	1 cut(s)	1193
BseXI	GCAGC	6 cut(s)	16, 213, 455, 1252, 1255, 1289
Bsh1236I	CGCG	1 cut(s)	417
BshFI	GGCC	6 cut(s)	219, 583, 915, 1129, 1164, 1255
BsiSI	CCGG	1 cut(s)	589
BslI	CCNNNNNNNGG	5 cut(s)	316, 421, 595, 837, 1241
BsmAI	GTCTC	3 cut(s)	82, 960, 1143
BsnI	GGCC	6 cut(s)	219, 583, 915, 1129, 1164, 1255
Bso31I	GGTCTC	1 cut(s)	960
Bsp143I	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
BspACI	CCGC	1 cut(s)	415
BspANI	GGCC	6 cut(s)	219, 583, 915, 1129, 1164, 1255
BspCNI	CTCAG	1 cut(s)	826
BspFNI	CGCG	1 cut(s)	417
BspHI	TCATGA	2 cut(s)	667, 1246
BspLI	GGNNCC	2 cut(s)	362, 1182
BspMAI	CTGCAG	1 cut(s)	508
BspMI	ACCTGC	2 cut(s)	110, 666
BspOI	GCTAGC	1 cut(s)	456
BspPI	GGATC	6 cut(s)	127, 355, 368, 553, 799, 1226
BspQI	GCTCTTC	1 cut(s)	402
BspTNI	GGTCTC	1 cut(s)	960
BsrDI	GCAATG	1 cut(s)	320
BsrFI	RCCGGY	1 cut(s)	588
BsrI	ACTGG	1 cut(s)	1086
BssAI	RCCGGY	1 cut(s)	588
BssECI	CCNNGG	1 cut(s)	808
BssMI	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
BssSI	CACGAG	1 cut(s)	72
Bst2BI	CACGAG	1 cut(s)	72
Bst4CI	ACNGT	3 cut(s)	242, 988, 1174
Bst6I	CTCTTC	2 cut(s)	247, 402
BstAPI	GCANNNNNTGC	2 cut(s)	125, 449
BstC8I	GCNNGC	3 cut(s)	182, 454, 458
BstDEI	CTNAG	6 cut(s)	248, 365, 645, 826, 834, 1124
BstF5I	GGATG	2 cut(s)	304, 730
BstFNI	CGCG	1 cut(s)	417
BstH2I	RGCGCY	1 cut(s)	415
BstHHI	GCGC	2 cut(s)	414, 480
BstKTI	GATC	8 cut(s)	135, 363, 434, 548, 807, 909, 1033, 1234
BstMAI	GTCTC	3 cut(s)	82, 960, 1143
BstMBI	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
BstMWI	GCNNNNNNNGC	8 cut(s)	125, 146, 449, 589, 746, 847, 1274, 1277
BstNSI	RCATGY	3 cut(s)	467, 1138, 1320
BstSFI	CTRYAG	2 cut(s)	504, 877
BstUI	CGCG	1 cut(s)	417
BstV1I	GCAGC	6 cut(s)	16, 213, 455, 1252, 1255, 1289
BstV2I	GAAGAC	1 cut(s)	1332
BstX2I	RGATCY	2 cut(s)	360, 1231
BstYI	RGATCY	2 cut(s)	360, 1231
BsuRI	GGCC	6 cut(s)	219, 583, 915, 1129, 1164, 1255
BtsCI	GGATG	2 cut(s)	304, 730
BtsIMutI	CAGTG	1 cut(s)	1179
BveI	ACCTGC	2 cut(s)	110, 666
Cac8I	GCNNGC	3 cut(s)	182, 454, 458
CciI	TCATGA	2 cut(s)	667, 1246
CfoI	GCGC	2 cut(s)	414, 480
Cfr10I	RCCGGY	1 cut(s)	588
Cfr13I	GGNCC	1 cut(s)	509
Csp6I	GTAC	3 cut(s)	238, 283, 622
CviAII	CATG	8 cut(s)	150, 464, 668, 851, 1135, 1142, 1247, 1317
CviQI	GTAC	3 cut(s)	238, 283, 622
DdeI	CTNAG	6 cut(s)	248, 365, 645, 826, 834, 1124
DpnI	GATC	8 cut(s)	134, 362, 433, 547, 806, 908, 1032, 1233
DpnII	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
Eam1104I	CTCTTC	2 cut(s)	247, 402
EarI	CTCTTC	2 cut(s)	247, 402
Eco147I	AGGCCT	2 cut(s)	583, 1129
Eco31I	GGTCTC	1 cut(s)	960
Eco32I	GATATC	1 cut(s)	1347
Eco47I	GGWCC	1 cut(s)	509
Eco57I	CTGAAG	1 cut(s)	426
EcoO109I	RGGNCCY	1 cut(s)	509
EcoRI	GAATTC	1 cut(s)	425
EcoRV	GATATC	1 cut(s)	1347
FaeI	CATG	8 cut(s)	153, 467, 671, 854, 1138, 1145, 1250, 1320
FalI	AAGNNNNNCTT	4 cut(s)	348, 380, 999, 1031
FatI	CATG	8 cut(s)	149, 463, 667, 850, 1134, 1141, 1246, 1316
FauNDI	CATATG	2 cut(s)	1197, 1324
FbaI	TGATCA	1 cut(s)	1030
Fnu4HI	GCNGC	7 cut(s)	30, 227, 415, 444, 1266, 1269, 1278
FokI	GGATG	2 cut(s)	311, 737
Fsp4HI	GCNGC	7 cut(s)	30, 227, 415, 444, 1266, 1269, 1278
FspBI	CTAG	5 cut(s)	453, 570, 816, 1119, 1131
GlaI	GCGC	2 cut(s)	413, 479
GluI	GCNGC	7 cut(s)	30, 227, 415, 444, 1266, 1269, 1278
GsuI	CTGGAG	2 cut(s)	314, 920
HaeII	RGCGCY	1 cut(s)	415
HaeIII	GGCC	6 cut(s)	219, 583, 915, 1129, 1164, 1255
HapII	CCGG	1 cut(s)	589
HhaI	GCGC	2 cut(s)	414, 480
Hin1II	CATG	8 cut(s)	153, 467, 671, 854, 1138, 1145, 1250, 1320
Hin6I	GCGC	2 cut(s)	412, 478
HinP1I	GCGC	2 cut(s)	412, 478
HindIII	AAGCTT	2 cut(s)	395, 1013
HinfI	GANTC	2 cut(s)	197, 554
HpaII	CCGG	1 cut(s)	589
HphI	GGTGA	1 cut(s)	37
Hpy166II	GTNNAC	1 cut(s)	352
Hpy188I	TCNGA	8 cut(s)	164, 214, 431, 436, 809, 862, 871, 911
Hpy188III	TCNNGA	4 cut(s)	570, 668, 1187, 1247
Hpy8I	GTNNAC	1 cut(s)	352
Hpy99I	CGWCG	1 cut(s)	938
HpyAV	CCTTC	5 cut(s)	209, 415, 491, 1001, 1154
HpyCH4III	ACNGT	3 cut(s)	242, 988, 1174
HpyF10VI	GCNNNNNNNGC	8 cut(s)	125, 146, 449, 589, 746, 847, 1274, 1277
HpyF3I	CTNAG	6 cut(s)	248, 365, 645, 826, 834, 1124
Hsp92II	CATG	8 cut(s)	153, 467, 671, 854, 1138, 1145, 1250, 1320
HspAI	GCGC	2 cut(s)	412, 478
Ksp22I	TGATCA	1 cut(s)	1030
Kzo9I	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	2 cut(s)	847, 1180
Lsp1109I	GCAGC	6 cut(s)	16, 213, 455, 1252, 1255, 1289
LweI	GCATC	6 cut(s)	41, 218, 289, 391, 673, 1291
MaeI	CTAG	5 cut(s)	453, 570, 816, 1119, 1131
MaeIII	GTNAC	3 cut(s)	731, 821, 1168
MalI	GATC	8 cut(s)	134, 362, 433, 547, 806, 908, 1032, 1233
MboI	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
MboII	GAAGA	6 cut(s)	49, 264, 419, 930, 1241, 1332
MfeI	CAATTG	2 cut(s)	175, 447
MflI	RGATCY	2 cut(s)	360, 1231
MluCI	AATT	8 cut(s)	63, 175, 202, 425, 447, 792, 855, 1286
MroXI	GAANNNNTTC	1 cut(s)	425
MseI	TTAA	3 cut(s)	617, 702, 1074
MslI	CAYNNNNRTG	4 cut(s)	380, 696, 1196, 1315
MspI	CCGG	1 cut(s)	589
MunI	CAATTG	2 cut(s)	175, 447
MvnI	CGCG	1 cut(s)	417
MwoI	GCNNNNNNNGC	8 cut(s)	125, 146, 449, 589, 746, 847, 1274, 1277
NdeI	CATATG	2 cut(s)	1197, 1324
NdeII	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
NheI	GCTAGC	1 cut(s)	452
NlaIII	CATG	8 cut(s)	153, 467, 671, 854, 1138, 1145, 1250, 1320
NlaIV	GGNNCC	2 cut(s)	362, 1182
NmuCI	GTSAC	1 cut(s)	1168
NspI	RCATGY	3 cut(s)	467, 1138, 1320
OliI	CACNNNNGTG	1 cut(s)	380
PagI	TCATGA	2 cut(s)	667, 1246
PceI	AGGCCT	2 cut(s)	583, 1129
PciI	ACATGT	1 cut(s)	463
PciSI	GCTCTTC	1 cut(s)	402
PdmI	GAANNNNTTC	1 cut(s)	425
PfeI	GAWTC	2 cut(s)	197, 554
PflMI	CCANNNNNTGG	1 cut(s)	1241
PkrI	GCNGC	7 cut(s)	31, 228, 416, 445, 1267, 1270, 1279
PpuMI	RGGWCCY	1 cut(s)	509
PscI	ACATGT	1 cut(s)	463
PsiI	TTATAA	1 cut(s)	158
Psp5II	RGGWCCY	1 cut(s)	509
PspN4I	GGNNCC	2 cut(s)	362, 1182
PspPI	GGNCC	1 cut(s)	509
PspPPI	RGGWCCY	1 cut(s)	509
PstI	CTGCAG	1 cut(s)	508
PsuI	RGATCY	2 cut(s)	360, 1231
RsaI	GTAC	3 cut(s)	239, 284, 623
RsaNI	GTAC	3 cut(s)	238, 283, 622
RseI	CAYNNNNRTG	4 cut(s)	380, 696, 1196, 1315
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	3 cut(s)	617, 702, 1074
SatI	GCNGC	7 cut(s)	30, 227, 415, 444, 1266, 1269, 1278
Sau3AI	GATC	8 cut(s)	132, 360, 431, 545, 804, 906, 1030, 1231
Sau96I	GGNCC	1 cut(s)	509
SbfI	CCTGCAGG	1 cut(s)	508
SdaI	CCTGCAGG	1 cut(s)	508
SfaNI	GCATC	6 cut(s)	41, 218, 289, 391, 673, 1291
SfcI	CTRYAG	2 cut(s)	504, 877
SinI	GGWCC	1 cut(s)	509
SmiMI	CAYNNNNRTG	4 cut(s)	380, 696, 1196, 1315
Sse8387I	CCTGCAGG	1 cut(s)	508
Sse9I	AATT	8 cut(s)	63, 175, 202, 425, 447, 792, 855, 1286
SseBI	AGGCCT	2 cut(s)	583, 1129
SsiI	CCGC	1 cut(s)	415
SspMI	CTAG	5 cut(s)	453, 570, 816, 1119, 1131
StuI	AGGCCT	2 cut(s)	583, 1129
TaaI	ACNGT	3 cut(s)	242, 988, 1174
TaqI	TCGA	2 cut(s)	936, 1343
TasI	AATT	8 cut(s)	63, 175, 202, 425, 447, 792, 855, 1286
TatI	WGTACW	1 cut(s)	237
TauI	GCSGC	1 cut(s)	417
TfiI	GAWTC	2 cut(s)	197, 554
Tru1I	TTAA	3 cut(s)	617, 702, 1074
Tru9I	TTAA	3 cut(s)	617, 702, 1074
TscAI	CASTG	1 cut(s)	1179
TseFI	GTSAC	1 cut(s)	1168
TseI	GCWGC	6 cut(s)	29, 226, 443, 1265, 1268, 1277
Tsp45I	GTSAC	1 cut(s)	1168
TspDTI	ATGAA	4 cut(s)	49, 523, 1077, 1242
TspRI	CASTG	1 cut(s)	1179
Van91I	CCANNNNNTGG	1 cut(s)	1241
VpaK11BI	GGWCC	1 cut(s)	509
XapI	RAATTY	2 cut(s)	425, 855
XbaI	TCTAGA	1 cut(s)	569
XceI	RCATGY	3 cut(s)	467, 1138, 1320
XmnI	GAANNNNTTC	1 cut(s)	425
XspI	CTAG	5 cut(s)	453, 570, 816, 1119, 1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.