Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0010878

Physical Location & Seq

Genomic Coordinates Reverse (-)

3229827 .. 3232856

Gene Structure 3030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1039800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCATCGTCGCCTTCAGAGCTGAGCCTGGACTGCAAGCCCCATAGTTACTCCATGCTCCTCAAATCCTTTGGGGATCTGCAGGCGTCTCACCTCCACGACCAGCCTCAGACTCAGAAGCTTGAAGAATTCCTCTCCCGCCTCGAAGAAGAACGTCTCAAGATCGACGCTTTCAAGCGCGAACTCCCTCTTTCCATGCAACTCCTCACCACTGCTGTGGAGGCTTCAAGGCAGCAGCTACAGGCGTACAGAACAAACAATATCCAAGGCCAAACCAGGCCAGTGCTTGAAGAATTCATACCCCTTAAACATTCAACCTCTGAAGGCTCAGAAAAACCTACCAACCCTACTTCTGATAAGGCAAACTGGATGACCTCCGCCCAACTCTGGAGTCAAGCAACTGATCATAACCCTAGTGCAACGTCCAAAACTCAATCAACTATAACATCTGGCCCGAAAGAAGCCGATATCGGCTTCAGCGTCAGCCCCAAGCTAGGGTTAGACACCAAGCAACCTAGGTCCTACGGTGGAGGAGCATTCCTTCCGTTTTCCAAAGACCGCAGCCCTACTTTGCGGCCTCTTCCGGAACTAGCTCTTGCCTCTCCGGAGAACAAGGCAGAGATTATCTTGGAGGACCATCATGAGAATGGAAATAATAATTCATCATCAGCTGCTGGGAACTGTAATGAACAAGGTAAATTATTAGGAGCTGGTGGAATTAATAATAACTCGGAGGGACAAAATGGACAAACAACTACAGCCGCCGCGGCCGCTCAAACCCATAGAAAGGCAAGGAGGTGTTGGTCTCCGGACTTACACCGTAGATTCGTCAATGCCCTTCAAATGCTTGGTGGTTCCCAAGTGGCGACCCCGAAACAGATCAGAGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGAAGTACAGGCTCCACACAAGACGACCGAGCCCAAGCCCCCAAGCAGGCGGAGGACCAGCGCCACAGCTGGTAGTCCTAGGCGGCATCTGGGTGCCGCAGGAGTACGCTACTGCAACCCACAACGGTCCCACGGCTCTTTACAGCCCGCACCCGGGCTCCCATGCACCAACGCACTATTGCGCCACCCCAATGCCACAAGATTTCTACGCCACGCAGCAGCACCAGCAGCAGCTGCACCACCACACTCTCCAACACCAGCTCCACGTGTACAGGACGTCGACCGCCTCCCACACCCAGAGCTCCCCCGAGTCTGATGGCCGAGGAGCCGGGGACAGGTCAGAGAGCATCGAAGACGGCAAGTCGGAGAGCAGCAGCTGGAAGGGTACTGAGAGCGGTGATCATGTCCATATGAACGGCGGAGATCAGAGAAACGGAGGAGTGTTGGCTGCTCGGAGATCGGAAGACGGCGGGGACAGTAACGGAAGTCAGATCACGCTCAAGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009266 GO:0009628 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010452 GO:0010468 GO:0010476 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032870 GO:0033993 GO:0034968 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0140110 GO:1901564 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

482

Amino Acids

52.38

Weight (kDa)

6.79

Isoelectric Point (pI)

60.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HHO5_N	PF26575	12 - 81	1.6e-23	HHO5-like, N-terminal domain
Myb_DNA-binding	PF00249	265 - 316	1.1e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03500
fragaria_vesca	FvH4_1g04130 FvH4_1g04130
malus_domestica	MD02G1039800.v1.1 MD15G1180700.v1.1
prunus_persica	Prupe.7G235900_v2.0.a1
pyrus_communis	pycom02g03310 pycom15g16210
rosa_chinensis	RchiOBHm_Chr2g0089601
rosa_laevigata	RLG00000016043
rosa_multiflora	Rmu_sc0004662.1_g000005
rosa_roxburghii	Rroxscaffold_2G00151720
rosa_rugosa	Rorug02G0001900 Rorug02G0002000 Rorug02G0002100
rosa_samantha	Rh2AG047200 Rh2BG046000 Rh2CG047900 Rh2DG047400
rosa_wichuraiana	Rw2G003960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1217
AccB1I	GGYRCC	1 cut(s)	1030
AccBSI	CCGCTC	2 cut(s)	773, 1332
AccI	GTMKAC	1 cut(s)	1217
AccII	CGCG	2 cut(s)	180, 767
AccIII	TCCGGA	3 cut(s)	583, 604, 808
AclWI	GGATC	1 cut(s)	84
AcoI	YGGCCR	2 cut(s)	768, 1255
AcsI	RAATTY	2 cut(s)	128, 293
AcuI	CTGAAG	2 cut(s)	342, 460
AcvI	CACGTG	1 cut(s)	1204
AcyI	GRCGYC	2 cut(s)	86, 1214
AfaI	GTAC	5 cut(s)	248, 944, 1043, 1208, 1324
AfiI	CCNNNNNNNGG	8 cut(s)	387, 494, 495, 787, 983, 1090, 1091, 1272
AflIII	ACRYGT	1 cut(s)	1203
AgsI	TTSAA	6 cut(s)	125, 175, 228, 290, 315, 842
AhdI	GACNNNNNGTC	1 cut(s)	1297
AjnI	CCWGG	2 cut(s)	27, 275
AleI	CACNNNNGTG	1 cut(s)	215
Alw21I	GWGCWC	1 cut(s)	1241
Alw26I	GTCTC	3 cut(s)	93, 161, 810
AlwI	GGATC	1 cut(s)	84
AlwNI	CAGNNNCTG	3 cut(s)	674, 1171, 1314
Ama87I	CYCGRG	2 cut(s)	1090, 1244
Aor13HI	TCCGGA	3 cut(s)	583, 604, 808
AoxI	GGCC	6 cut(s)	268, 278, 451, 575, 768, 1255
ApoI	RAATTY	2 cut(s)	128, 293
AseI	ATTAAT	1 cut(s)	720
AspA2I	CCTAGG	2 cut(s)	515, 1015
AspLEI	GCGC	3 cut(s)	180, 1000, 1121
AspS9I	GGNCC	5 cut(s)	452, 519, 634, 992, 1064
AsuC2I	CCSGG	3 cut(s)	1091, 1092, 1267
AsuHPI	GGTGA	3 cut(s)	83, 199, 1346
AvaI	CYCGRG	2 cut(s)	1090, 1244
AvaII	GGWCC	4 cut(s)	519, 634, 992, 1064
AvrII	CCTAGG	2 cut(s)	515, 1015
BanI	GGYRCC	1 cut(s)	1030
BanII	GRGCYC	3 cut(s)	971, 1097, 1241
BarI	GAAGNNNNNNTAC	2 cut(s)	282, 314
BbrPI	CACGTG	1 cut(s)	1204
BbsI	GAAGAC	2 cut(s)	1296, 1407
Bbv12I	GWGCWC	1 cut(s)	1241
BccI	CCATC	2 cut(s)	645, 1247
BceAI	ACGGC	4 cut(s)	1086, 1309, 1369, 1420
BciT130I	CCWGG	2 cut(s)	29, 277
BclI	TGATCA	2 cut(s)	403, 1336
BcnI	CCSGG	3 cut(s)	1091, 1092, 1267
BcoDI	GTCTC	3 cut(s)	93, 161, 810
BfaI	CTAG	5 cut(s)	414, 494, 516, 590, 1016
BfmI	CTRYAG	3 cut(s)	80, 239, 756
BfoI	RGCGCY	1 cut(s)	1001
BglI	GCCNNNNNGGC	1 cut(s)	767
BlnI	CCTAGG	2 cut(s)	515, 1015
BlpI	GCTNAGC	1 cut(s)	23
Bme1390I	CCNGG	5 cut(s)	29, 277, 1091, 1092, 1267
Bme18I	GGWCC	4 cut(s)	519, 634, 992, 1064
BmeRI	GACNNNNNGTC	1 cut(s)	1297
BmeT110I	CYCGRG	2 cut(s)	1090, 1244
BmgT120I	GGNCC	5 cut(s)	452, 519, 634, 992, 1064
BmiI	GGNNCC	6 cut(s)	856, 950, 1032, 1066, 1096, 1264
BmrFI	CCNGG	5 cut(s)	29, 277, 1091, 1092, 1267
BmsI	GCATC	3 cut(s)	14, 1032, 1293
BpiI	GAAGAC	2 cut(s)	1296, 1407
BpmI	CTGGAG	1 cut(s)	409
Bpu1102I	GCTNAGC	1 cut(s)	23
BpuEI	CTTGAG	2 cut(s)	143, 1421
BpuMI	CCSGG	3 cut(s)	1091, 1092, 1267
BsaAI	YACGTR	1 cut(s)	1204
BsaHI	GRCGYC	2 cut(s)	86, 1214
BsaI	GGTCTC	1 cut(s)	810
BsaJI	CCNNGG	8 cut(s)	265, 515, 765, 1015, 1068, 1090, 1258, 1266
BsaWI	WCCGGW	3 cut(s)	583, 604, 808
BsaXI	ACNNNNNCTCC	4 cut(s)	1079, 1109, 1182, 1212
Bsc4I	CCNNNNNNNGG	8 cut(s)	387, 494, 495, 787, 983, 1090, 1091, 1272
Bse1I	ACTGG	2 cut(s)	281, 371
BseAI	TCCGGA	3 cut(s)	583, 604, 808
BseBI	CCWGG	2 cut(s)	29, 277
BseDI	CCNNGG	8 cut(s)	265, 515, 765, 1015, 1068, 1090, 1258, 1266
BseGI	GGATG	1 cut(s)	375
BseLI	CCNNNNNNNGG	8 cut(s)	387, 494, 495, 787, 983, 1090, 1091, 1272
BseMII	CTCAG	5 cut(s)	14, 122, 128, 342, 1317
BseNI	ACTGG	2 cut(s)	281, 371
BseRI	GAGGAG	5 cut(s)	50, 194, 546, 1275, 1389
BseX3I	CGGCCG	1 cut(s)	768
BseYI	CCCAGC	1 cut(s)	674
BsgI	GTGCAG	1 cut(s)	1157
Bsh1236I	CGCG	2 cut(s)	180, 767
Bsh1285I	CGRYCG	3 cut(s)	771, 965, 1221
BshFI	GGCC	6 cut(s)	270, 280, 453, 577, 770, 1257
BshNI	GGYRCC	1 cut(s)	1030
BsiEI	CGRYCG	3 cut(s)	771, 965, 1221
BsiHKAI	GWGCWC	1 cut(s)	1241
BsiHKCI	CYCGRG	2 cut(s)	1090, 1244
BsiSI	CCGG	5 cut(s)	584, 605, 809, 1091, 1266
BslFI	GGGAC	4 cut(s)	750, 1050, 1283, 1424
BslI	CCNNNNNNNGG	8 cut(s)	387, 494, 495, 787, 983, 1090, 1091, 1272
BsmAI	GTCTC	3 cut(s)	93, 161, 810
BsmBI	CGTCTC	2 cut(s)	93, 161
BsmFI	GGGAC	4 cut(s)	750, 1050, 1283, 1424
BsmI	GAATGC	1 cut(s)	536
BsnI	GGCC	6 cut(s)	270, 280, 453, 577, 770, 1257
Bso31I	GGTCTC	1 cut(s)	810
BsoBI	CYCGRG	2 cut(s)	1090, 1244
Bsp1286I	GDGCHC	3 cut(s)	971, 1097, 1241
Bsp13I	TCCGGA	3 cut(s)	583, 604, 808
Bsp1407I	TGTACA	1 cut(s)	1206
Bsp143I	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
Bsp1720I	GCTNAGC	1 cut(s)	23
BspANI	GGCC	6 cut(s)	270, 280, 453, 577, 770, 1257
BspCNI	CTCAG	5 cut(s)	15, 121, 127, 341, 1318
BspEI	TCCGGA	3 cut(s)	583, 604, 808
BspFNI	CGCG	2 cut(s)	180, 767
BspHI	TCATGA	1 cut(s)	640
BspLI	GGNNCC	6 cut(s)	856, 950, 1032, 1066, 1096, 1264
BspMAI	CTGCAG	1 cut(s)	84
BspPI	GGATC	1 cut(s)	84
BspT107I	GGYRCC	1 cut(s)	1030
BspTNI	GGTCTC	1 cut(s)	810
BsrBI	CCGCTC	2 cut(s)	773, 1332
BsrGI	TGTACA	1 cut(s)	1206
BsrI	ACTGG	2 cut(s)	281, 371
BssECI	CCNNGG	8 cut(s)	265, 515, 765, 1015, 1068, 1090, 1258, 1266
BssMI	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
BssNI	GRCGYC	2 cut(s)	86, 1214
BssT1I	CCWWGG	3 cut(s)	265, 515, 1015
Bst2UI	CCWGG	2 cut(s)	29, 277
Bst4CI	ACNGT	6 cut(s)	527, 683, 821, 905, 1064, 1415
Bst6I	CTCTTC	1 cut(s)	585
BstACI	GRCGYC	2 cut(s)	86, 1214
BstAPI	GCANNNNNTGC	1 cut(s)	1171
BstAUI	TGTACA	1 cut(s)	1206
BstBAI	YACGTR	1 cut(s)	1204
BstC8I	GCNNGC	4 cut(s)	38, 84, 985, 1085
BstDEI	CTNAG	5 cut(s)	23, 108, 114, 328, 1326
BstDSI	CCRYGG	2 cut(s)	765, 1068
BstF5I	GGATG	1 cut(s)	375
BstFNI	CGCG	2 cut(s)	180, 767
BstH2I	RGCGCY	1 cut(s)	1001
BstHHI	GCGC	3 cut(s)	180, 1000, 1121
BstKTI	GATC	8 cut(s)	79, 165, 406, 882, 1339, 1363, 1397, 1431
BstMAI	GTCTC	3 cut(s)	93, 161, 810
BstMBI	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
BstMCI	CGRYCG	3 cut(s)	771, 965, 1221
BstMWI	GCNNNNNNNGC	8 cut(s)	19, 33, 221, 767, 770, 1162, 1165, 1171
BstNI	CCWGG	2 cut(s)	29, 277
BstSCI	CCNGG	5 cut(s)	27, 275, 1089, 1090, 1265
BstSFI	CTRYAG	3 cut(s)	80, 239, 756
BstUI	CGCG	2 cut(s)	180, 767
BstV2I	GAAGAC	2 cut(s)	1296, 1407
BstX2I	RGATCY	1 cut(s)	76
BstXI	CCANNNNNNTGG	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	76
BstZI	CGGCCG	1 cut(s)	768
BsuRI	GGCC	6 cut(s)	270, 280, 453, 577, 770, 1257
BtgI	CCRYGG	2 cut(s)	765, 1068
BtsCI	GGATG	1 cut(s)	375
BtsI	GCAGTG	1 cut(s)	210
BtsIMutI	CAGTG	2 cut(s)	210, 288
Cac8I	GCNNGC	4 cut(s)	38, 84, 985, 1085
CaiI	CAGNNNCTG	3 cut(s)	674, 1171, 1314
CciI	TCATGA	1 cut(s)	640
CciNI	GCGGCCGC	1 cut(s)	768
CfoI	GCGC	3 cut(s)	180, 1000, 1121
Cfr13I	GGNCC	5 cut(s)	452, 519, 634, 992, 1064
Cfr42I	CCGCGG	1 cut(s)	768
Cfr9I	CCCGGG	1 cut(s)	1090
CseI	GACGC	3 cut(s)	75, 176, 469
Csp6I	GTAC	5 cut(s)	247, 943, 1042, 1207, 1323
CviAII	CATG	5 cut(s)	55, 196, 641, 1100, 1340
CviQI	GTAC	5 cut(s)	247, 943, 1042, 1207, 1323
DdeI	CTNAG	5 cut(s)	23, 108, 114, 328, 1326
DpnI	GATC	8 cut(s)	78, 164, 405, 881, 1338, 1362, 1396, 1430
DpnII	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
DriI	GACNNNNNGTC	1 cut(s)	1297
EaeI	YGGCCR	2 cut(s)	768, 1255
EagI	CGGCCG	1 cut(s)	768
Eam1104I	CTCTTC	1 cut(s)	585
Eam1105I	GACNNNNNGTC	1 cut(s)	1297
EarI	CTCTTC	1 cut(s)	585
EciI	GGCGGA	3 cut(s)	367, 1002, 1371
Ecl136II	GAGCTC	1 cut(s)	1239
EclXI	CGGCCG	1 cut(s)	768
Eco130I	CCWWGG	3 cut(s)	265, 515, 1015
Eco24I	GRGCYC	3 cut(s)	971, 1097, 1241
Eco31I	GGTCTC	1 cut(s)	810
Eco32I	GATATC	1 cut(s)	469
Eco47I	GGWCC	4 cut(s)	519, 634, 992, 1064
Eco52I	CGGCCG	1 cut(s)	768
Eco53kI	GAGCTC	1 cut(s)	1239
Eco57I	CTGAAG	2 cut(s)	342, 460
Eco72I	CACGTG	1 cut(s)	1204
Eco88I	CYCGRG	2 cut(s)	1090, 1244
EcoICRI	GAGCTC	1 cut(s)	1239
EcoO109I	RGGNCCY	1 cut(s)	519
EcoRI	GAATTC	2 cut(s)	128, 293
EcoRII	CCWGG	2 cut(s)	27, 275
EcoRV	GATATC	1 cut(s)	469
EcoT14I	CCWWGG	3 cut(s)	265, 515, 1015
EcoT38I	GRGCYC	3 cut(s)	971, 1097, 1241
ErhI	CCWWGG	3 cut(s)	265, 515, 1015
Esp3I	CGTCTC	2 cut(s)	93, 161
FaeI	CATG	5 cut(s)	58, 199, 644, 1103, 1343
FaqI	GGGAC	4 cut(s)	750, 1050, 1283, 1424
FatI	CATG	5 cut(s)	54, 195, 640, 1099, 1339
FauI	CCCGC	3 cut(s)	146, 1092, 1400
FauNDI	CATATG	1 cut(s)	1347
FbaI	TGATCA	2 cut(s)	403, 1336
FblI	GTMKAC	1 cut(s)	1217
FokI	GGATG	1 cut(s)	382
FriOI	GRGCYC	3 cut(s)	971, 1097, 1241
FspBI	CTAG	5 cut(s)	414, 494, 516, 590, 1016
GlaI	GCGC	3 cut(s)	179, 999, 1120
GsaI	CCCAGC	1 cut(s)	678
GsuI	CTGGAG	1 cut(s)	409
HaeII	RGCGCY	1 cut(s)	1001
HaeIII	GGCC	6 cut(s)	270, 280, 453, 577, 770, 1257
HapII	CCGG	5 cut(s)	584, 605, 809, 1091, 1266
HgaI	GACGC	3 cut(s)	75, 176, 469
HhaI	GCGC	3 cut(s)	180, 1000, 1121
Hin1I	GRCGYC	2 cut(s)	86, 1214
Hin1II	CATG	5 cut(s)	58, 199, 644, 1103, 1343
Hin6I	GCGC	3 cut(s)	178, 998, 1119
HinP1I	GCGC	3 cut(s)	178, 998, 1119
HincII	GTYRAC	2 cut(s)	901, 1218
HindII	GTYRAC	2 cut(s)	901, 1218
HindIII	AAGCTT	1 cut(s)	119
HinfI	GANTC	4 cut(s)	112, 391, 825, 1247
HpaII	CCGG	5 cut(s)	584, 605, 809, 1091, 1266
HphI	GGTGA	3 cut(s)	83, 199, 1346
Hpy166II	GTNNAC	3 cut(s)	901, 1207, 1218
Hpy188III	TCNNGA	6 cut(s)	160, 388, 584, 605, 641, 809
Hpy8I	GTNNAC	3 cut(s)	901, 1207, 1218
Hpy99I	CGWCG	3 cut(s)	13, 170, 1219
HpyAV	CCTTC	6 cut(s)	24, 317, 551, 848, 889, 1312
HpyCH4III	ACNGT	6 cut(s)	527, 683, 821, 905, 1064, 1415
HpyCH4IV	ACGT	4 cut(s)	154, 422, 1203, 1214
HpyCH4V	TGCA	8 cut(s)	36, 82, 199, 419, 937, 1052, 1103, 1174
HpyF10VI	GCNNNNNNNGC	8 cut(s)	19, 33, 221, 767, 770, 1162, 1165, 1171
HpyF3I	CTNAG	5 cut(s)	23, 108, 114, 328, 1326
HpySE526I	ACGT	4 cut(s)	154, 422, 1203, 1214
Hsp92I	GRCGYC	2 cut(s)	86, 1214
Hsp92II	CATG	5 cut(s)	58, 199, 644, 1103, 1343
HspAI	GCGC	3 cut(s)	178, 998, 1119
Kpn2I	TCCGGA	3 cut(s)	583, 604, 808
Ksp22I	TGATCA	2 cut(s)	403, 1336
KspI	CCGCGG	1 cut(s)	768
Kzo9I	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
LmnI	GCTCC	8 cut(s)	63, 533, 707, 954, 1100, 1203, 1244, 1262
LweI	GCATC	3 cut(s)	14, 1032, 1293
MaeI	CTAG	5 cut(s)	414, 494, 516, 590, 1016
MaeII	ACGT	4 cut(s)	154, 422, 1203, 1214
MaeIII	GTNAC	2 cut(s)	47, 1415
MalI	GATC	8 cut(s)	78, 164, 405, 881, 1338, 1362, 1396, 1430
MbiI	CCGCTC	2 cut(s)	773, 1332
MboI	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
MboII	GAAGA	7 cut(s)	137, 158, 161, 302, 572, 1301, 1412
MflI	RGATCY	1 cut(s)	76
MhlI	GDGCHC	3 cut(s)	971, 1097, 1241
MluCI	AATT	5 cut(s)	128, 293, 658, 698, 717
MlyI	GAGTC	3 cut(s)	106, 400, 1256
MmeI	TCCRAC	2 cut(s)	1213, 1281
MroI	TCCGGA	3 cut(s)	583, 604, 808
MseI	TTAA	3 cut(s)	306, 720, 924
MslI	CAYNNNNRTG	4 cut(s)	215, 645, 1028, 1127
MspA1I	CMGCKG	5 cut(s)	671, 767, 1006, 1171, 1314
MspI	CCGG	5 cut(s)	584, 605, 809, 1091, 1266
MspR9I	CCNGG	5 cut(s)	29, 277, 1091, 1092, 1267
Mva1269I	GAATGC	1 cut(s)	536
MvaI	CCWGG	2 cut(s)	29, 277
MvnI	CGCG	2 cut(s)	180, 767
MwoI	GCNNNNNNNGC	8 cut(s)	19, 33, 221, 767, 770, 1162, 1165, 1171
NciI	CCSGG	3 cut(s)	1091, 1092, 1267
NdeI	CATATG	1 cut(s)	1347
NdeII	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
NlaIII	CATG	5 cut(s)	58, 199, 644, 1103, 1343
NlaIV	GGNNCC	6 cut(s)	856, 950, 1032, 1066, 1096, 1264
NmeAIII	GCCGAG	1 cut(s)	1283
NotI	GCGGCCGC	1 cut(s)	768
OliI	CACNNNNGTG	1 cut(s)	215
PagI	TCATGA	1 cut(s)	640
PcsI	WCGNNNNNNNCGW	1 cut(s)	477
PctI	GAATGC	1 cut(s)	536
PfeI	GAWTC	1 cut(s)	825
PleI	GAGTC	3 cut(s)	106, 399, 1255
PmaCI	CACGTG	1 cut(s)	1204
PmlI	CACGTG	1 cut(s)	1204
PpsI	GAGTC	3 cut(s)	106, 399, 1255
Ppu21I	YACGTR	1 cut(s)	1204
PpuMI	RGGWCCY	1 cut(s)	519
PshBI	ATTAAT	1 cut(s)	720
Psp124BI	GAGCTC	1 cut(s)	1241
Psp5II	RGGWCCY	1 cut(s)	519
Psp6I	CCWGG	2 cut(s)	27, 275
PspCI	CACGTG	1 cut(s)	1204
PspFI	CCCAGC	1 cut(s)	674
PspGI	CCWGG	2 cut(s)	27, 275
PspN4I	GGNNCC	6 cut(s)	856, 950, 1032, 1066, 1096, 1264
PspPI	GGNCC	5 cut(s)	452, 519, 634, 992, 1064
PspPPI	RGGWCCY	1 cut(s)	519
PstI	CTGCAG	1 cut(s)	84
PstNI	CAGNNNCTG	3 cut(s)	674, 1171, 1314
PsuI	RGATCY	1 cut(s)	76
PvuII	CAGCTG	4 cut(s)	671, 1006, 1171, 1314
RsaI	GTAC	5 cut(s)	248, 944, 1043, 1208, 1324
RsaNI	GTAC	5 cut(s)	247, 943, 1042, 1207, 1323
RseI	CAYNNNNRTG	4 cut(s)	215, 645, 1028, 1127
SacI	GAGCTC	1 cut(s)	1241
SacII	CCGCGG	1 cut(s)	768
SalI	GTCGAC	1 cut(s)	1216
SaqAI	TTAA	3 cut(s)	306, 720, 924
Sau3AI	GATC	8 cut(s)	76, 162, 403, 879, 1336, 1360, 1394, 1428
Sau96I	GGNCC	5 cut(s)	452, 519, 634, 992, 1064
SchI	GAGTC	3 cut(s)	106, 400, 1256
ScrFI	CCNGG	5 cut(s)	29, 277, 1091, 1092, 1267
SduI	GDGCHC	3 cut(s)	971, 1097, 1241
SfaNI	GCATC	3 cut(s)	14, 1032, 1293
SfcI	CTRYAG	3 cut(s)	80, 239, 756
Sfr303I	CCGCGG	1 cut(s)	768
SgrBI	CCGCGG	1 cut(s)	768
SinI	GGWCC	4 cut(s)	519, 634, 992, 1064
SmaI	CCCGGG	1 cut(s)	1092
SmiMI	CAYNNNNRTG	4 cut(s)	215, 645, 1028, 1127
SmlI	CTYRAG	2 cut(s)	158, 1436
SmoI	CTYRAG	2 cut(s)	158, 1436
Sse9I	AATT	5 cut(s)	128, 293, 658, 698, 717
SspMI	CTAG	5 cut(s)	414, 494, 516, 590, 1016
SstI	GAGCTC	1 cut(s)	1241
StyD4I	CCNGG	5 cut(s)	27, 275, 1089, 1090, 1265
StyI	CCWWGG	3 cut(s)	265, 515, 1015
TaaI	ACNGT	6 cut(s)	527, 683, 821, 905, 1064, 1415
TaiI	ACGT	4 cut(s)	157, 425, 1206, 1217
TaqI	TCGA	4 cut(s)	144, 165, 1217, 1287
TaqII	GACCGA	1 cut(s)	979
TasI	AATT	5 cut(s)	128, 293, 658, 698, 717
TatI	WGTACW	2 cut(s)	942, 1206
TauI	GCSGC	7 cut(s)	577, 764, 767, 770, 773, 1023, 1036
TfiI	GAWTC	1 cut(s)	825
Tru1I	TTAA	3 cut(s)	306, 720, 924
Tru9I	TTAA	3 cut(s)	306, 720, 924
TscAI	CASTG	2 cut(s)	217, 288
TspDTI	ATGAA	6 cut(s)	286, 651, 702, 908, 933, 1364
TspGWI	ACGGA	3 cut(s)	534, 1386, 1434
TspMI	CCCGGG	1 cut(s)	1090
TspRI	CASTG	2 cut(s)	217, 288
VpaK11BI	GGWCC	4 cut(s)	519, 634, 992, 1064
VspI	ATTAAT	1 cut(s)	720
XapI	RAATTY	2 cut(s)	128, 293
XcmI	CCANNNNNNNNNTGG	1 cut(s)	644
XmaI	CCCGGG	1 cut(s)	1090
XmaJI	CCTAGG	2 cut(s)	515, 1015
XmiI	GTMKAC	1 cut(s)	1217
XspI	CTAG	5 cut(s)	414, 494, 516, 590, 1016
ZraI	GACGTC	1 cut(s)	1215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.