Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010878

Physical Location & Seq

Genomic Coordinates Reverse (-)

229323 .. 233932

Gene Structure 4610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0002000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGCCCAAGAAGAAGGCGAACCCGCACTCTCCGATTCTCTATTAGATCCATCTCTATCTCTCTCCCGAACCGTTTCCTTTAGCCGCCGCCTCAATGCCCAGGCCCCCGAGTTCGTCCCCAATCGCACCTCCGCCGCCCCACCCGCAGTGGTACCACCTCCTCCTCCTGTCGCTCAGGTCCACGTCTACTCTCCGCCTCCCACGCCTTTCCATGTTCCGATCCAGGTCGTCCCTCCTCCTCCGCCTCCTCACGTGGTGCCCGTCCATCACCGTCATCACTTGCCGGTTCAGTACCATCACCATCATCATCAGTATTACGCTGCTGGATTTGCCGGAGACCAAGAGCCGCCGCCGCCAGAGGATCAACCTCCGCCGGATCACGCTGCCTCCTCCAAGTCTCACAAGCTTTCCGATGAAGCCACTTCCAAGATTTTGAATCAGGTGGAGTATTATTTCAGTGATCTGAACTTAGCTACTACTGATCATCTTATGAGGTTCATAAACAAAGACCCTGAAGGATTTGTGCCAATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCGTAAGTAGTCATTCCCAGCTTGCAACTGTATTGCGGAACTCCTCAAAGCTTGTAGTACATGAAGATGGGAAGAAGGTCAGACGCCAGCATCCCCTGACTCAGTCAGATATGGAAGAGTTGCAATCTCGCATTGTTGTTGCTGAAAATTTGCCTGAGGATCATTGCCACCAAAACCTGATGAAGATTTTCTCTGCTGCTGGGAGTGTGAAGACAATTCGTACCTGCCAGCCGCAAACCTCAAATAGTAATTCTTCCTCAGCATCCAGATCAGCAAAAGCAGATGGCATGCATTTCAGTAACAAGTTGCATGCATTTGTGGAATATGAATCCCCTGAGCTGGCGGAGAAAGCTGTGGCCGAACTTAATGATGAGGGGAACTGGAGGAGTGGACTTAGAGTACGATTAATGCTTAAACGCATGTCAAAACCTGGTCAAGTGCGAGGGAAAAAGGGGCAGGATGGGGAACTGCAATTAGAGGAAGAGGATGCTTCTACACATGAACAAATACATCATGCCAATGAGAAACAATCAGAAGATTCTTCCCGGCAATTTGATGCTCATTCACATGAACAAGGAGAGGAACATGCGAATGATAAGGAGGGTGGACAAAGGAAAGCGCGTAATCGACAAGGAGGACGCGGCAAGGGGCGTGGGCGGGGTCAATACCACCACAATAATCGAAATCATGTTGGGACTCCTCACAACAGTTCAATTGGTAGTAGTGAGCAGCCGGGTATAGGTGTAGGTGTAGCCAGACAGCCTCCTGGACCTCGTATGCCAGATGGCACAAGAGGATTTGCAATGGGTCGGGGGAGGCCAGTTGCTGTTAATATTGCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009266 GO:0009628 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010452 GO:0010468 GO:0010476 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032870 GO:0033993 GO:0034968 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0140110 GO:1901564 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

469

Amino Acids

51.62

Weight (kDa)

7.52

Isoelectric Point (pI)

61.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
La	PF05383	144 - 202	3.1e-20	La domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03500
fragaria_vesca	FvH4_1g04130 FvH4_1g04130
malus_domestica	MD02G1039800.v1.1 MD15G1180700.v1.1
prunus_persica	Prupe.7G235900_v2.0.a1
pyrus_communis	pycom02g03310 pycom15g16210
rosa_chinensis	RchiOBHm_Chr2g0089601
rosa_laevigata	RLG00000016043
rosa_multiflora	Rmu_sc0004662.1_g000005
rosa_roxburghii	Rroxscaffold_2G00151720
rosa_rugosa	Rorug02G0001900 Rorug02G0002000 Rorug02G0002100
rosa_samantha	Rh2AG047200 Rh2BG046000 Rh2CG047900 Rh2DG047400
rosa_wichuraiana	Rw2G003960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	797
Acc65I	GGTACC	1 cut(s)	151
AccB1I	GGYRCC	2 cut(s)	151, 256
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	2 cut(s)	1186, 1206
AclWI	GGATC	5 cut(s)	41, 214, 369, 384, 732
AcoI	YGGCCR	1 cut(s)	921
AcsI	RAATTY	1 cut(s)	712
AcuI	CTGAAG	1 cut(s)	534
AcvI	CACGTG	1 cut(s)	253
AcyI	GRCGYC	1 cut(s)	649
AdeI	CACNNNGTG	1 cut(s)	256
AfaI	GTAC	5 cut(s)	153, 293, 624, 787, 966
AfiI	CCNNNNNNNGG	2 cut(s)	904, 1304
AgsI	TTSAA	3 cut(s)	436, 550, 1278
AjiI	CACGTC	1 cut(s)	184
AjnI	CCWGG	4 cut(s)	99, 222, 994, 1330
AluBI	AGCT	6 cut(s)	406, 473, 586, 616, 904, 917
AluI	AGCT	6 cut(s)	406, 473, 586, 616, 904, 917
Alw26I	GTCTC	2 cut(s)	330, 402
AlwI	GGATC	5 cut(s)	41, 214, 369, 384, 732
AlwNI	CAGNNNCTG	1 cut(s)	1391
Ama87I	CYCGRG	1 cut(s)	107
AoxI	GGCC	5 cut(s)	3, 102, 561, 921, 1382
ApeKI	GCWGC	4 cut(s)	320, 383, 761, 1294
ApoI	RAATTY	1 cut(s)	712
AseI	ATTAAT	1 cut(s)	971
Asp700I	GAANNNNTTC	2 cut(s)	73, 752
Asp718I	GGTACC	1 cut(s)	151
AspLEI	GCGC	1 cut(s)	1186
AspS9I	GGNCC	5 cut(s)	4, 103, 178, 562, 1334
AsuC2I	CCSGG	2 cut(s)	1111, 1299
AsuHPI	GGTGA	2 cut(s)	260, 290
AvaI	CYCGRG	1 cut(s)	107
AvaII	GGWCC	2 cut(s)	178, 1334
AxyI	CCTNAGG	1 cut(s)	720
BaeGI	GKGCMC	1 cut(s)	261
BanI	GGYRCC	2 cut(s)	151, 256
BbrPI	CACGTG	1 cut(s)	253
BbsI	GAAGAC	1 cut(s)	782
BbvCI	CCTCAGC	1 cut(s)	823
BbvI	GCAGC	4 cut(s)	307, 370, 748, 1306
BccI	CCATC	8 cut(s)	58, 273, 303, 309, 626, 842, 1019, 1343
BciT130I	CCWGG	4 cut(s)	101, 224, 996, 1332
BclI	TGATCA	1 cut(s)	481
BcnI	CCSGG	2 cut(s)	1111, 1299
BcoDI	GTCTC	2 cut(s)	330, 402
BfuAI	ACCTGC	1 cut(s)	797
Bme1390I	CCNGG	6 cut(s)	101, 224, 996, 1111, 1299, 1332
Bme18I	GGWCC	2 cut(s)	178, 1334
BmeT110I	CYCGRG	1 cut(s)	107
BmgBI	CACGTC	1 cut(s)	184
BmgT120I	GGNCC	5 cut(s)	4, 103, 178, 562, 1334
BmiI	GGNNCC	3 cut(s)	105, 153, 258
BmrFI	CCNGG	6 cut(s)	101, 224, 996, 1111, 1299, 1332
BmsI	GCATC	5 cut(s)	551, 664, 836, 1042, 1111
BpiI	GAAGAC	1 cut(s)	782
BpmI	CTGGAG	1 cut(s)	967
Bpu10I	CCTNAGC	3 cut(s)	174, 823, 900
BpuMI	CCSGG	2 cut(s)	1111, 1299
BsaAI	YACGTR	1 cut(s)	253
BsaHI	GRCGYC	1 cut(s)	649
BsaI	GGTCTC	1 cut(s)	330
BsaJI	CCNNGG	1 cut(s)	99
BsaXI	ACNNNNNCTCC	2 cut(s)	371, 401
Bsc4I	CCNNNNNNNGG	2 cut(s)	904, 1304
Bse118I	RCCGGY	1 cut(s)	283
Bse1I	ACTGG	2 cut(s)	950, 1385
Bse21I	CCTNAGG	1 cut(s)	720
Bse3DI	GCAATG	2 cut(s)	727, 1374
BseBI	CCWGG	4 cut(s)	101, 224, 996, 1332
BseDI	CCNNGG	1 cut(s)	99
BseGI	GGATG	4 cut(s)	655, 827, 1030, 1057
BseLI	CCNNNNNNNGG	2 cut(s)	904, 1304
BseMI	GCAATG	2 cut(s)	727, 1374
BseMII	CTCAG	5 cut(s)	188, 680, 711, 837, 891
BseNI	ACTGG	2 cut(s)	950, 1385
BseRI	GAGGAG	9 cut(s)	150, 153, 225, 228, 237, 379, 598, 964, 1254
BseSI	GKGCMC	1 cut(s)	261
BseXI	GCAGC	4 cut(s)	307, 370, 748, 1306
BseYI	CCCAGC	2 cut(s)	582, 764
Bsh1236I	CGCG	2 cut(s)	1186, 1206
BshFI	GGCC	5 cut(s)	5, 104, 563, 923, 1384
BshNI	GGYRCC	2 cut(s)	151, 256
BsiHKCI	CYCGRG	1 cut(s)	107
BsiSI	CCGG	5 cut(s)	284, 333, 374, 1111, 1298
BslFI	GGGAC	3 cut(s)	101, 215, 1273
BslI	CCNNNNNNNGG	2 cut(s)	904, 1304
BsmAI	GTCTC	2 cut(s)	330, 402
BsmFI	GGGAC	3 cut(s)	101, 215, 1273
BsnI	GGCC	5 cut(s)	5, 104, 563, 923, 1384
Bso31I	GGTCTC	1 cut(s)	330
BsoBI	CYCGRG	1 cut(s)	107
Bsp1286I	GDGCHC	1 cut(s)	261
Bsp143I	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
BspANI	GGCC	5 cut(s)	5, 104, 563, 923, 1384
BspCNI	CTCAG	5 cut(s)	187, 679, 712, 836, 892
BspFNI	CGCG	2 cut(s)	1186, 1206
BspLI	GGNNCC	3 cut(s)	105, 153, 258
BspMI	ACCTGC	1 cut(s)	797
BspPI	GGATC	5 cut(s)	41, 214, 369, 384, 732
BspT107I	GGYRCC	2 cut(s)	151, 256
BspTNI	GGTCTC	1 cut(s)	330
BsrDI	GCAATG	2 cut(s)	727, 1374
BsrFI	RCCGGY	1 cut(s)	283
BsrI	ACTGG	2 cut(s)	950, 1385
BssAI	RCCGGY	1 cut(s)	283
BssECI	CCNNGG	1 cut(s)	99
BssMI	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
BssNI	GRCGYC	1 cut(s)	649
Bst2UI	CCWGG	4 cut(s)	101, 224, 996, 1332
Bst4CI	ACNGT	4 cut(s)	73, 272, 595, 1274
Bst6I	CTCTTC	2 cut(s)	675, 1041
BstACI	GRCGYC	1 cut(s)	649
BstBAI	YACGTR	1 cut(s)	253
BstC8I	GCNNGC	6 cut(s)	588, 653, 794, 854, 876, 906
BstDEI	CTNAG	7 cut(s)	174, 469, 666, 720, 823, 900, 959
BstF5I	GGATG	4 cut(s)	655, 827, 1030, 1057
BstFNI	CGCG	2 cut(s)	1186, 1206
BstHHI	GCGC	1 cut(s)	1186
BstKTI	GATC	8 cut(s)	49, 222, 364, 379, 463, 484, 727, 836
BstMAI	GTCTC	2 cut(s)	330, 402
BstMBI	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
BstMWI	GCNNNNNNNGC	5 cut(s)	143, 202, 329, 352, 914
BstNI	CCWGG	4 cut(s)	101, 224, 996, 1332
BstNSI	RCATGY	4 cut(s)	856, 878, 988, 1154
BstSCI	CCNGG	6 cut(s)	99, 222, 994, 1109, 1297, 1330
BstSLI	GKGCMC	1 cut(s)	261
BstUI	CGCG	2 cut(s)	1186, 1206
BstV1I	GCAGC	4 cut(s)	307, 370, 748, 1306
BstV2I	GAAGAC	1 cut(s)	782
BstX2I	RGATCY	1 cut(s)	46
BstYI	RGATCY	1 cut(s)	46
Bsu36I	CCTNAGG	1 cut(s)	720
BsuRI	GGCC	5 cut(s)	5, 104, 563, 923, 1384
BtrI	CACGTC	1 cut(s)	184
BtsCI	GGATG	4 cut(s)	655, 827, 1030, 1057
BtsI	GCAGTG	1 cut(s)	153
BtsIMutI	CAGTG	2 cut(s)	153, 463
BveI	ACCTGC	1 cut(s)	797
Cac8I	GCNNGC	6 cut(s)	588, 653, 794, 854, 876, 906
CaiI	CAGNNNCTG	1 cut(s)	1391
CfoI	GCGC	1 cut(s)	1186
Cfr10I	RCCGGY	1 cut(s)	283
Cfr13I	GGNCC	5 cut(s)	4, 103, 178, 562, 1334
CseI	GACGC	2 cut(s)	657, 1212
CsiI	ACCWGGT	1 cut(s)	994
Csp6I	GTAC	5 cut(s)	152, 292, 623, 786, 965
CspCI	CAANNNNNGTGG	2 cut(s)	1198, 1233
CviQI	GTAC	5 cut(s)	152, 292, 623, 786, 965
DdeI	CTNAG	7 cut(s)	174, 469, 666, 720, 823, 900, 959
DpnI	GATC	8 cut(s)	48, 221, 363, 378, 462, 483, 726, 835
DpnII	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
DraIII	CACNNNGTG	1 cut(s)	256
EaeI	YGGCCR	1 cut(s)	921
Eam1104I	CTCTTC	2 cut(s)	675, 1041
EarI	CTCTTC	2 cut(s)	675, 1041
EciI	GGCGGA	5 cut(s)	121, 183, 231, 360, 923
Eco31I	GGTCTC	1 cut(s)	330
Eco47I	GGWCC	2 cut(s)	178, 1334
Eco57I	CTGAAG	1 cut(s)	534
Eco72I	CACGTG	1 cut(s)	253
Eco81I	CCTNAGG	1 cut(s)	720
Eco88I	CYCGRG	1 cut(s)	107
EcoO109I	RGGNCCY	2 cut(s)	103, 562
EcoRII	CCWGG	4 cut(s)	99, 222, 994, 1330
EcoT22I	ATGCAT	2 cut(s)	858, 880
FaqI	GGGAC	3 cut(s)	101, 215, 1273
FauI	CCCGC	3 cut(s)	31, 151, 1215
FbaI	TGATCA	1 cut(s)	481
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	4 cut(s)	642, 814, 1037, 1064
GlaI	GCGC	1 cut(s)	1185
GsaI	CCCAGC	2 cut(s)	586, 768
GsuI	CTGGAG	1 cut(s)	967
HaeIII	GGCC	5 cut(s)	5, 104, 563, 923, 1384
HapII	CCGG	5 cut(s)	284, 333, 374, 1111, 1298
HgaI	GACGC	2 cut(s)	657, 1212
HhaI	GCGC	1 cut(s)	1186
Hin1I	GRCGYC	1 cut(s)	649
Hin6I	GCGC	1 cut(s)	1184
HinP1I	GCGC	1 cut(s)	1184
HindIII	AAGCTT	2 cut(s)	404, 614
HinfI	GANTC	6 cut(s)	35, 436, 664, 893, 1103, 1261
HpaII	CCGG	5 cut(s)	284, 333, 374, 1111, 1298
HphI	GGTGA	2 cut(s)	260, 290
Hpy166II	GTNNAC	4 cut(s)	181, 187, 956, 1172
Hpy188I	TCNGA	7 cut(s)	34, 219, 412, 465, 647, 673, 1099
Hpy188III	TCNNGA	3 cut(s)	66, 550, 831
Hpy8I	GTNNAC	4 cut(s)	181, 187, 956, 1172
HpyAV	CCTTC	3 cut(s)	8, 509, 634
HpyCH4III	ACNGT	4 cut(s)	73, 272, 595, 1274
HpyCH4IV	ACGT	2 cut(s)	183, 252
HpyCH4V	TGCA	9 cut(s)	542, 590, 688, 856, 874, 878, 1036, 1367, 1403
HpyF10VI	GCNNNNNNNGC	5 cut(s)	143, 202, 329, 352, 914
HpyF3I	CTNAG	7 cut(s)	174, 469, 666, 720, 823, 900, 959
HpySE526I	ACGT	2 cut(s)	183, 252
Hsp92I	GRCGYC	1 cut(s)	649
HspAI	GCGC	1 cut(s)	1184
KpnI	GGTACC	1 cut(s)	155
Ksp22I	TGATCA	1 cut(s)	481
Kzo9I	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
Lsp1109I	GCAGC	4 cut(s)	307, 370, 748, 1306
LweI	GCATC	5 cut(s)	551, 664, 836, 1042, 1111
MabI	ACCWGGT	1 cut(s)	994
MaeII	ACGT	2 cut(s)	183, 252
MaeIII	GTNAC	1 cut(s)	863
MalI	GATC	8 cut(s)	48, 221, 363, 378, 462, 483, 726, 835
MboI	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
MfeI	CAATTG	1 cut(s)	1278
MflI	RGATCY	1 cut(s)	46
MhlI	GDGCHC	1 cut(s)	261
MluCI	AATT	6 cut(s)	712, 780, 814, 1037, 1115, 1278
MlyI	GAGTC	2 cut(s)	658, 1255
Mph1103I	ATGCAT	2 cut(s)	858, 880
MroXI	GAANNNNTTC	2 cut(s)	73, 752
MseI	TTAA	5 cut(s)	558, 930, 971, 978, 1395
MslI	CAYNNNNRTG	4 cut(s)	630, 1083, 1131, 1155
MspI	CCGG	5 cut(s)	284, 333, 374, 1111, 1298
MspR9I	CCNGG	6 cut(s)	101, 224, 996, 1111, 1299, 1332
MunI	CAATTG	1 cut(s)	1278
MvaI	CCWGG	4 cut(s)	101, 224, 996, 1332
MvnI	CGCG	2 cut(s)	1186, 1206
MwoI	GCNNNNNNNGC	5 cut(s)	143, 202, 329, 352, 914
NciI	CCSGG	2 cut(s)	1111, 1299
NdeII	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
NlaIV	GGNNCC	3 cut(s)	105, 153, 258
NsiI	ATGCAT	2 cut(s)	858, 880
NspI	RCATGY	4 cut(s)	856, 878, 988, 1154
PaeI	GCATGC	2 cut(s)	856, 878
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PdmI	GAANNNNTTC	2 cut(s)	73, 752
PfeI	GAWTC	4 cut(s)	35, 436, 893, 1103
PflFI	GACNNNGTC	1 cut(s)	667
PfoI	TCCNGGA	1 cut(s)	1330
PleI	GAGTC	2 cut(s)	658, 1255
PmaCI	CACGTG	1 cut(s)	253
PmlI	CACGTG	1 cut(s)	253
PpsI	GAGTC	2 cut(s)	658, 1255
Ppu21I	YACGTR	1 cut(s)	253
PshBI	ATTAAT	1 cut(s)	971
Psp6I	CCWGG	4 cut(s)	99, 222, 994, 1330
PspCI	CACGTG	1 cut(s)	253
PspFI	CCCAGC	2 cut(s)	582, 764
PspGI	CCWGG	4 cut(s)	99, 222, 994, 1330
PspN4I	GGNNCC	3 cut(s)	105, 153, 258
PspPI	GGNCC	5 cut(s)	4, 103, 178, 562, 1334
PstNI	CAGNNNCTG	1 cut(s)	1391
PsuI	RGATCY	1 cut(s)	46
PsyI	GACNNNGTC	1 cut(s)	667
RsaI	GTAC	5 cut(s)	153, 293, 624, 787, 966
RsaNI	GTAC	5 cut(s)	152, 292, 623, 786, 965
RseI	CAYNNNNRTG	4 cut(s)	630, 1083, 1131, 1155
SaqAI	TTAA	5 cut(s)	558, 930, 971, 978, 1395
Sau3AI	GATC	8 cut(s)	46, 219, 361, 376, 460, 481, 724, 833
Sau96I	GGNCC	5 cut(s)	4, 103, 178, 562, 1334
SchI	GAGTC	2 cut(s)	658, 1255
ScrFI	CCNGG	6 cut(s)	101, 224, 996, 1111, 1299, 1332
SduI	GDGCHC	1 cut(s)	261
SexAI	ACCWGGT	1 cut(s)	994
SfaNI	GCATC	5 cut(s)	551, 664, 836, 1042, 1111
SinI	GGWCC	2 cut(s)	178, 1334
SmiMI	CAYNNNNRTG	4 cut(s)	630, 1083, 1131, 1155
SphI	GCATGC	2 cut(s)	856, 878
Sse9I	AATT	6 cut(s)	712, 780, 814, 1037, 1115, 1278
SspI	AATATT	1 cut(s)	1399
StyD4I	CCNGG	6 cut(s)	99, 222, 994, 1109, 1297, 1330
TaaI	ACNGT	4 cut(s)	73, 272, 595, 1274
TaiI	ACGT	2 cut(s)	186, 255
TaqI	TCGA	2 cut(s)	1192, 1246
TasI	AATT	6 cut(s)	712, 780, 814, 1037, 1115, 1278
TatI	WGTACW	1 cut(s)	622
TauI	GCSGC	8 cut(s)	87, 90, 137, 349, 352, 355, 799, 1209
TfiI	GAWTC	4 cut(s)	35, 436, 893, 1103
Tru1I	TTAA	5 cut(s)	558, 930, 971, 978, 1395
Tru9I	TTAA	5 cut(s)	558, 930, 971, 978, 1395
TscAI	CASTG	2 cut(s)	153, 463
TseI	GCWGC	4 cut(s)	320, 383, 761, 1294
TspDTI	ATGAA	7 cut(s)	429, 487, 642, 761, 906, 1080, 1149
TspRI	CASTG	2 cut(s)	153, 463
Tth111I	GACNNNGTC	1 cut(s)	667
VpaK11BI	GGWCC	2 cut(s)	178, 1334
VspI	ATTAAT	1 cut(s)	971
XapI	RAATTY	1 cut(s)	712
XceI	RCATGY	4 cut(s)	856, 878, 988, 1154
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	2 cut(s)	73, 752
Zsp2I	ATGCAT	2 cut(s)	858, 880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.