Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0010878

Physical Location & Seq

Genomic Coordinates Reverse (-)

2175881 .. 2178296

Gene Structure 2416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g03310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGCATCGTCGCCTTCAGAGCTGATCAGTTACTCCATGCTCCTCAAATCCTTTGGGGATCTGCAGGCGTCTCACCTCCACGACCAGCCTCAGACTCAGAAGCTTGAAGAATTCCTCTCCCGCCTCGAAGAAGAACGTCTCAAGATCGACGCTTTCAAGCGCGAACTCCCTCTTTCTATGCAACTCCTCACCACTGCTGTGGAGGCTTCAAGGCAGCAGCTACAGGCGTACAGAACAAGCAATATCCAAGGCCAAACCAGGCCAGTGCTTGAAGAATTCATACCCCTTAAACATTCAACCTCTGAAGGCTCAGAAAAACCTACCAACCCTACTTCTGATAAGGCAAACTGGATGACCTCCGCCCAACTCTGGAGTCAAGCAACTGATCATAATCCTAGTGCAACGTCCAAAACTCAATCAACTATAACATCTGGCCCGAAAGAAGCCGATATCGGCTTCAGCGTCAGCCCCAAGCTAGGGTTAGACACCAAGCAACCTAGGTCCTACGGTGGAGGAGCATTCCTTCCGTTTTCCAAAGACCGCAGCCCTACTTTGCGGCCTCTTCCGGAACTAGCTCTTGCCTCTCCGGAGAACAAGGCAGAGATTATCTTGGAGGACCATCATGAGAATGGAAATAATAATTCATCATCAGCTGCTGGGAACTGTAATGAACAAGGTAAATTATTAGGAGCTGGTGGAATTAATAATAACTCGGAGGGACAAAATGGACAAACAACTACAGCCGCGGCCGCCGCTCAAACCCATAGAAAGGCAAGGAGGTGTTGGTCTCCGGACTTACACCGCAGATTCGTCAATGCCCTTCAAATGCTTGGTGGTTCTCAAGTGGCGACCCCGAAACAGATCAGAGAGCTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGAAGTACAGGCTCCACACGAGACGACCAAGCCCAAGCCCCCAAGCAGGCGGAGGACCAGCGCCACAGCTGGTAGTCCTAGGCGGCATCTGGGTGCCGCAGGAGTACGCCACTGCAGCCCACAACGGTCCCACGGCTCTTTACAGCCCGCACCCGGGCTCCCATGCACCAACGCACTATTGCGCCACCCCAATGCCACAAGATTTCTGCGCCATGCAGCAGCAGCAGCTGCACCACCACACTCTCCAACACCAGCTCCACATGTACAGGACGTCGACCGCCTCCCACACCCAGAGCTCCCCCGAGTCTGATGGCCGAGGAGCCGGGGACAGGTCAGGGAGTATCGAAGAAGGCAAGTCGGATAGCAGCAGCTGGAAGGGTACTGAGAGCGGTGATCGATGTTCACATGAACGGCGGAGATCAGAGAAACGGAGGAGGGTTGGCTGCGAGGAGATCGGAAGACGGCGGGGACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009266 GO:0009628 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010452 GO:0010468 GO:0010476 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032870 GO:0033993 GO:0034968 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0140110 GO:1901564 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

465

Amino Acids

50.89

Weight (kDa)

8.79

Isoelectric Point (pI)

67.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HHO5_N	PF26575	10 - 75	1.4e-22	HHO5-like, N-terminal domain
Myb_DNA-binding	PF00249	259 - 310	1e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03500
fragaria_vesca	FvH4_1g04130 FvH4_1g04130
malus_domestica	MD02G1039800.v1.1 MD15G1180700.v1.1
prunus_persica	Prupe.7G235900_v2.0.a1
pyrus_communis	pycom02g03310 pycom15g16210
rosa_chinensis	RchiOBHm_Chr2g0089601
rosa_laevigata	RLG00000016043
rosa_multiflora	Rmu_sc0004662.1_g000005
rosa_roxburghii	Rroxscaffold_2G00151720
rosa_rugosa	Rorug02G0001900 Rorug02G0002000 Rorug02G0002100
rosa_samantha	Rh2AG047200 Rh2BG046000 Rh2CG047900 Rh2DG047400
rosa_wichuraiana	Rw2G003960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1193
AccB1I	GGYRCC	1 cut(s)	1012
AccBSI	CCGCTC	2 cut(s)	755, 1308
AccI	GTMKAC	1 cut(s)	1193
AccII	CGCG	2 cut(s)	162, 746
AccIII	TCCGGA	3 cut(s)	565, 586, 790
AclWI	GGATC	1 cut(s)	66
AcoI	YGGCCR	2 cut(s)	747, 1231
AcsI	RAATTY	2 cut(s)	110, 275
AcuI	CTGAAG	2 cut(s)	324, 442
AcyI	GRCGYC	2 cut(s)	68, 1190
AfaI	GTAC	5 cut(s)	230, 926, 1025, 1184, 1300
AfiI	CCNNNNNNNGG	8 cut(s)	369, 476, 477, 769, 965, 1072, 1073, 1248
AflIII	ACRYGT	1 cut(s)	1179
AgsI	TTSAA	6 cut(s)	107, 157, 210, 272, 297, 824
AjnI	CCWGG	1 cut(s)	257
AleI	CACNNNNGTG	1 cut(s)	197
Alw21I	GWGCWC	1 cut(s)	1217
Alw26I	GTCTC	4 cut(s)	75, 143, 792, 934
AlwI	GGATC	1 cut(s)	66
AlwNI	CAGNNNCTG	3 cut(s)	656, 1147, 1290
Ama87I	CYCGRG	2 cut(s)	1072, 1220
Aor13HI	TCCGGA	3 cut(s)	565, 586, 790
AoxI	GGCC	6 cut(s)	250, 260, 433, 557, 747, 1231
ApoI	RAATTY	2 cut(s)	110, 275
AseI	ATTAAT	1 cut(s)	702
AspA2I	CCTAGG	2 cut(s)	497, 997
AspLEI	GCGC	4 cut(s)	162, 982, 1103, 1130
AspS9I	GGNCC	5 cut(s)	434, 501, 616, 974, 1046
AsuC2I	CCSGG	3 cut(s)	1073, 1074, 1243
AsuHPI	GGTGA	3 cut(s)	65, 181, 1322
AvaI	CYCGRG	2 cut(s)	1072, 1220
AvaII	GGWCC	4 cut(s)	501, 616, 974, 1046
AvrII	CCTAGG	2 cut(s)	497, 997
BanI	GGYRCC	1 cut(s)	1012
BanII	GRGCYC	2 cut(s)	1079, 1217
BarI	GAAGNNNNNNTAC	2 cut(s)	264, 296
BauI	CACGAG	1 cut(s)	937
BbsI	GAAGAC	1 cut(s)	1384
Bbv12I	GWGCWC	1 cut(s)	1217
BccI	CCATC	2 cut(s)	627, 1223
BceAI	ACGGC	2 cut(s)	1068, 1346
BciT130I	CCWGG	1 cut(s)	259
BclI	TGATCA	2 cut(s)	24, 385
BcnI	CCSGG	3 cut(s)	1073, 1074, 1243
BcoDI	GTCTC	4 cut(s)	75, 143, 792, 934
BfaI	CTAG	5 cut(s)	396, 476, 498, 572, 998
BfmI	CTRYAG	4 cut(s)	62, 221, 738, 1032
BfoI	RGCGCY	1 cut(s)	983
BlnI	CCTAGG	2 cut(s)	497, 997
Bme1390I	CCNGG	4 cut(s)	259, 1073, 1074, 1243
Bme18I	GGWCC	4 cut(s)	501, 616, 974, 1046
BmeT110I	CYCGRG	2 cut(s)	1072, 1220
BmgT120I	GGNCC	5 cut(s)	434, 501, 616, 974, 1046
BmiI	GGNNCC	5 cut(s)	932, 1014, 1048, 1078, 1240
BmrFI	CCNGG	4 cut(s)	259, 1073, 1074, 1243
BmsI	GCATC	2 cut(s)	14, 1014
BpiI	GAAGAC	1 cut(s)	1384
BpmI	CTGGAG	1 cut(s)	391
BpuEI	CTTGAG	2 cut(s)	125, 825
BpuMI	CCSGG	3 cut(s)	1073, 1074, 1243
Bsa29I	ATCGAT	1 cut(s)	1315
BsaBI	GATNNNNATC	1 cut(s)	390
BsaHI	GRCGYC	2 cut(s)	68, 1190
BsaI	GGTCTC	1 cut(s)	792
BsaJI	CCNNGG	8 cut(s)	247, 497, 744, 997, 1050, 1072, 1234, 1242
BsaWI	WCCGGW	3 cut(s)	565, 586, 790
BsaXI	ACNNNNNCTCC	4 cut(s)	1061, 1091, 1158, 1188
Bsc4I	CCNNNNNNNGG	8 cut(s)	369, 476, 477, 769, 965, 1072, 1073, 1248
Bse1I	ACTGG	2 cut(s)	263, 353
Bse8I	GATNNNNATC	1 cut(s)	390
BseAI	TCCGGA	3 cut(s)	565, 586, 790
BseBI	CCWGG	1 cut(s)	259
BseCI	ATCGAT	1 cut(s)	1315
BseDI	CCNNGG	8 cut(s)	247, 497, 744, 997, 1050, 1072, 1234, 1242
BseGI	GGATG	1 cut(s)	357
BseJI	GATNNNNATC	1 cut(s)	390
BseLI	CCNNNNNNNGG	8 cut(s)	369, 476, 477, 769, 965, 1072, 1073, 1248
BseMII	CTCAG	4 cut(s)	104, 110, 324, 1293
BseNI	ACTGG	2 cut(s)	263, 353
BseRI	GAGGAG	6 cut(s)	32, 176, 528, 1251, 1366, 1382
BseX3I	CGGCCG	1 cut(s)	747
BseYI	CCCAGC	1 cut(s)	656
BsgI	GTGCAG	1 cut(s)	1133
Bsh1236I	CGCG	2 cut(s)	162, 746
Bsh1285I	CGRYCG	2 cut(s)	750, 1197
BshFI	GGCC	6 cut(s)	252, 262, 435, 559, 749, 1233
BshNI	GGYRCC	1 cut(s)	1012
BshVI	ATCGAT	1 cut(s)	1315
BsiEI	CGRYCG	2 cut(s)	750, 1197
BsiHKAI	GWGCWC	1 cut(s)	1217
BsiHKCI	CYCGRG	2 cut(s)	1072, 1220
BsiSI	CCGG	5 cut(s)	566, 587, 791, 1073, 1242
BslFI	GGGAC	3 cut(s)	732, 1032, 1259
BslI	CCNNNNNNNGG	8 cut(s)	369, 476, 477, 769, 965, 1072, 1073, 1248
BsmAI	GTCTC	4 cut(s)	75, 143, 792, 934
BsmBI	CGTCTC	3 cut(s)	75, 143, 934
BsmFI	GGGAC	3 cut(s)	732, 1032, 1259
BsmI	GAATGC	1 cut(s)	518
BsnI	GGCC	6 cut(s)	252, 262, 435, 559, 749, 1233
Bso31I	GGTCTC	1 cut(s)	792
BsoBI	CYCGRG	2 cut(s)	1072, 1220
Bsp1286I	GDGCHC	2 cut(s)	1079, 1217
Bsp13I	TCCGGA	3 cut(s)	565, 586, 790
Bsp1407I	TGTACA	1 cut(s)	1182
Bsp143I	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
BspANI	GGCC	6 cut(s)	252, 262, 435, 559, 749, 1233
BspCNI	CTCAG	4 cut(s)	103, 109, 323, 1294
BspDI	ATCGAT	1 cut(s)	1315
BspEI	TCCGGA	3 cut(s)	565, 586, 790
BspFNI	CGCG	2 cut(s)	162, 746
BspHI	TCATGA	1 cut(s)	622
BspLI	GGNNCC	5 cut(s)	932, 1014, 1048, 1078, 1240
BspMAI	CTGCAG	2 cut(s)	66, 1036
BspPI	GGATC	1 cut(s)	66
BspT107I	GGYRCC	1 cut(s)	1012
BspTNI	GGTCTC	1 cut(s)	792
BsrBI	CCGCTC	2 cut(s)	755, 1308
BsrGI	TGTACA	1 cut(s)	1182
BsrI	ACTGG	2 cut(s)	263, 353
BssECI	CCNNGG	8 cut(s)	247, 497, 744, 997, 1050, 1072, 1234, 1242
BssMI	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
BssNI	GRCGYC	2 cut(s)	68, 1190
BssSI	CACGAG	1 cut(s)	937
BssT1I	CCWWGG	3 cut(s)	247, 497, 997
Bst2BI	CACGAG	1 cut(s)	937
Bst2UI	CCWGG	1 cut(s)	259
Bst4CI	ACNGT	5 cut(s)	509, 665, 887, 1046, 1392
Bst6I	CTCTTC	1 cut(s)	567
BstACI	GRCGYC	2 cut(s)	68, 1190
BstAPI	GCANNNNNTGC	1 cut(s)	1147
BstAUI	TGTACA	1 cut(s)	1182
BstC8I	GCNNGC	3 cut(s)	66, 967, 1067
BstDEI	CTNAG	4 cut(s)	90, 96, 310, 1302
BstDSI	CCRYGG	2 cut(s)	744, 1050
BstF5I	GGATG	1 cut(s)	357
BstFNI	CGCG	2 cut(s)	162, 746
BstH2I	RGCGCY	1 cut(s)	983
BstHHI	GCGC	4 cut(s)	162, 982, 1103, 1130
BstKTI	GATC	8 cut(s)	27, 61, 147, 388, 864, 1315, 1340, 1374
BstMAI	GTCTC	4 cut(s)	75, 143, 792, 934
BstMBI	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
BstMCI	CGRYCG	2 cut(s)	750, 1197
BstMWI	GCNNNNNNNGC	8 cut(s)	19, 203, 749, 752, 1034, 1141, 1144, 1147
BstNI	CCWGG	1 cut(s)	259
BstNSI	RCATGY	1 cut(s)	1183
BstSCI	CCNGG	4 cut(s)	257, 1071, 1072, 1241
BstSFI	CTRYAG	4 cut(s)	62, 221, 738, 1032
BstUI	CGCG	2 cut(s)	162, 746
BstV2I	GAAGAC	1 cut(s)	1384
BstX2I	RGATCY	1 cut(s)	58
BstXI	CCANNNNNNTGG	1 cut(s)	199
BstYI	RGATCY	1 cut(s)	58
BstZI	CGGCCG	1 cut(s)	747
Bsu15I	ATCGAT	1 cut(s)	1315
BsuRI	GGCC	6 cut(s)	252, 262, 435, 559, 749, 1233
BsuTUI	ATCGAT	1 cut(s)	1315
BtgI	CCRYGG	2 cut(s)	744, 1050
BtsCI	GGATG	1 cut(s)	357
BtsI	GCAGTG	2 cut(s)	192, 1029
BtsIMutI	CAGTG	3 cut(s)	192, 270, 1029
Cac8I	GCNNGC	3 cut(s)	66, 967, 1067
CaiI	CAGNNNCTG	3 cut(s)	656, 1147, 1290
CciI	TCATGA	1 cut(s)	622
CciNI	GCGGCCGC	1 cut(s)	747
CfoI	GCGC	4 cut(s)	162, 982, 1103, 1130
Cfr13I	GGNCC	5 cut(s)	434, 501, 616, 974, 1046
Cfr42I	CCGCGG	1 cut(s)	747
Cfr9I	CCCGGG	1 cut(s)	1072
ClaI	ATCGAT	1 cut(s)	1315
CseI	GACGC	3 cut(s)	57, 158, 451
Csp6I	GTAC	5 cut(s)	229, 925, 1024, 1183, 1299
CviAII	CATG	6 cut(s)	37, 623, 1082, 1132, 1180, 1325
CviQI	GTAC	5 cut(s)	229, 925, 1024, 1183, 1299
DdeI	CTNAG	4 cut(s)	90, 96, 310, 1302
DpnI	GATC	8 cut(s)	26, 60, 146, 387, 863, 1314, 1339, 1373
DpnII	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
EaeI	YGGCCR	2 cut(s)	747, 1231
EagI	CGGCCG	1 cut(s)	747
Eam1104I	CTCTTC	1 cut(s)	567
EarI	CTCTTC	1 cut(s)	567
EciI	GGCGGA	3 cut(s)	349, 984, 1348
Ecl136II	GAGCTC	1 cut(s)	1215
EclXI	CGGCCG	1 cut(s)	747
Eco130I	CCWWGG	3 cut(s)	247, 497, 997
Eco24I	GRGCYC	2 cut(s)	1079, 1217
Eco31I	GGTCTC	1 cut(s)	792
Eco32I	GATATC	1 cut(s)	451
Eco47I	GGWCC	4 cut(s)	501, 616, 974, 1046
Eco52I	CGGCCG	1 cut(s)	747
Eco53kI	GAGCTC	1 cut(s)	1215
Eco57I	CTGAAG	2 cut(s)	324, 442
Eco88I	CYCGRG	2 cut(s)	1072, 1220
EcoICRI	GAGCTC	1 cut(s)	1215
EcoO109I	RGGNCCY	1 cut(s)	501
EcoRI	GAATTC	2 cut(s)	110, 275
EcoRII	CCWGG	1 cut(s)	257
EcoRV	GATATC	1 cut(s)	451
EcoT14I	CCWWGG	3 cut(s)	247, 497, 997
EcoT38I	GRGCYC	2 cut(s)	1079, 1217
ErhI	CCWWGG	3 cut(s)	247, 497, 997
Esp3I	CGTCTC	3 cut(s)	75, 143, 934
FaeI	CATG	6 cut(s)	40, 626, 1085, 1135, 1183, 1328
FaqI	GGGAC	3 cut(s)	732, 1032, 1259
FatI	CATG	6 cut(s)	36, 622, 1081, 1131, 1179, 1324
FauI	CCCGC	3 cut(s)	128, 1074, 1377
FbaI	TGATCA	2 cut(s)	24, 385
FblI	GTMKAC	1 cut(s)	1193
FokI	GGATG	1 cut(s)	364
FriOI	GRGCYC	2 cut(s)	1079, 1217
FspBI	CTAG	5 cut(s)	396, 476, 498, 572, 998
GlaI	GCGC	4 cut(s)	161, 981, 1102, 1129
GsaI	CCCAGC	1 cut(s)	660
GsuI	CTGGAG	1 cut(s)	391
HaeII	RGCGCY	1 cut(s)	983
HaeIII	GGCC	6 cut(s)	252, 262, 435, 559, 749, 1233
HapII	CCGG	5 cut(s)	566, 587, 791, 1073, 1242
HgaI	GACGC	3 cut(s)	57, 158, 451
HhaI	GCGC	4 cut(s)	162, 982, 1103, 1130
Hin1I	GRCGYC	2 cut(s)	68, 1190
Hin1II	CATG	6 cut(s)	40, 626, 1085, 1135, 1183, 1328
Hin6I	GCGC	4 cut(s)	160, 980, 1101, 1128
HinP1I	GCGC	4 cut(s)	160, 980, 1101, 1128
HincII	GTYRAC	2 cut(s)	883, 1194
HindII	GTYRAC	2 cut(s)	883, 1194
HindIII	AAGCTT	1 cut(s)	101
HinfI	GANTC	4 cut(s)	94, 373, 807, 1223
HpaII	CCGG	5 cut(s)	566, 587, 791, 1073, 1242
HphI	GGTGA	3 cut(s)	65, 181, 1322
Hpy166II	GTNNAC	3 cut(s)	883, 1194, 1322
Hpy188III	TCNNGA	6 cut(s)	142, 370, 566, 587, 623, 791
Hpy8I	GTNNAC	3 cut(s)	883, 1194, 1322
Hpy99I	CGWCG	3 cut(s)	13, 152, 1195
HpyAV	CCTTC	7 cut(s)	24, 299, 533, 830, 871, 1262, 1288
HpyCH4III	ACNGT	5 cut(s)	509, 665, 887, 1046, 1392
HpyCH4IV	ACGT	3 cut(s)	136, 404, 1190
HpyCH4V	TGCA	8 cut(s)	64, 181, 401, 919, 1034, 1085, 1135, 1150
HpyF10VI	GCNNNNNNNGC	8 cut(s)	19, 203, 749, 752, 1034, 1141, 1144, 1147
HpyF3I	CTNAG	4 cut(s)	90, 96, 310, 1302
HpySE526I	ACGT	3 cut(s)	136, 404, 1190
Hsp92I	GRCGYC	2 cut(s)	68, 1190
Hsp92II	CATG	6 cut(s)	40, 626, 1085, 1135, 1183, 1328
HspAI	GCGC	4 cut(s)	160, 980, 1101, 1128
Kpn2I	TCCGGA	3 cut(s)	565, 586, 790
Ksp22I	TGATCA	2 cut(s)	24, 385
KspI	CCGCGG	1 cut(s)	747
Kzo9I	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
LmnI	GCTCC	8 cut(s)	45, 515, 689, 936, 1082, 1179, 1220, 1238
LweI	GCATC	2 cut(s)	14, 1014
MaeI	CTAG	5 cut(s)	396, 476, 498, 572, 998
MaeII	ACGT	3 cut(s)	136, 404, 1190
MaeIII	GTNAC	1 cut(s)	29
MalI	GATC	8 cut(s)	26, 60, 146, 387, 863, 1314, 1339, 1373
MbiI	CCGCTC	2 cut(s)	755, 1308
MboI	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
MboII	GAAGA	7 cut(s)	119, 140, 143, 284, 554, 1277, 1389
MflI	RGATCY	1 cut(s)	58
MhlI	GDGCHC	2 cut(s)	1079, 1217
MluCI	AATT	5 cut(s)	110, 275, 640, 680, 699
MlyI	GAGTC	3 cut(s)	88, 382, 1232
MmeI	TCCRAC	2 cut(s)	1189, 1257
MroI	TCCGGA	3 cut(s)	565, 586, 790
MseI	TTAA	3 cut(s)	288, 702, 906
MslI	CAYNNNNRTG	4 cut(s)	197, 627, 1010, 1109
MspA1I	CMGCKG	5 cut(s)	653, 746, 988, 1147, 1290
MspI	CCGG	5 cut(s)	566, 587, 791, 1073, 1242
MspR9I	CCNGG	4 cut(s)	259, 1073, 1074, 1243
Mva1269I	GAATGC	1 cut(s)	518
MvaI	CCWGG	1 cut(s)	259
MvnI	CGCG	2 cut(s)	162, 746
MwoI	GCNNNNNNNGC	8 cut(s)	19, 203, 749, 752, 1034, 1141, 1144, 1147
NciI	CCSGG	3 cut(s)	1073, 1074, 1243
NdeII	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
NlaIII	CATG	6 cut(s)	40, 626, 1085, 1135, 1183, 1328
NlaIV	GGNNCC	5 cut(s)	932, 1014, 1048, 1078, 1240
NmeAIII	GCCGAG	1 cut(s)	1259
NotI	GCGGCCGC	1 cut(s)	747
NspI	RCATGY	1 cut(s)	1183
OliI	CACNNNNGTG	1 cut(s)	197
PagI	TCATGA	1 cut(s)	622
PciI	ACATGT	1 cut(s)	1179
PcsI	WCGNNNNNNNCGW	1 cut(s)	459
PctI	GAATGC	1 cut(s)	518
PfeI	GAWTC	1 cut(s)	807
PleI	GAGTC	3 cut(s)	88, 381, 1231
PpsI	GAGTC	3 cut(s)	88, 381, 1231
PpuMI	RGGWCCY	1 cut(s)	501
PscI	ACATGT	1 cut(s)	1179
PshBI	ATTAAT	1 cut(s)	702
Psp124BI	GAGCTC	1 cut(s)	1217
Psp5II	RGGWCCY	1 cut(s)	501
Psp6I	CCWGG	1 cut(s)	257
PspFI	CCCAGC	1 cut(s)	656
PspGI	CCWGG	1 cut(s)	257
PspN4I	GGNNCC	5 cut(s)	932, 1014, 1048, 1078, 1240
PspPI	GGNCC	5 cut(s)	434, 501, 616, 974, 1046
PspPPI	RGGWCCY	1 cut(s)	501
PstI	CTGCAG	2 cut(s)	66, 1036
PstNI	CAGNNNCTG	3 cut(s)	656, 1147, 1290
PsuI	RGATCY	1 cut(s)	58
PvuII	CAGCTG	4 cut(s)	653, 988, 1147, 1290
RsaI	GTAC	5 cut(s)	230, 926, 1025, 1184, 1300
RsaNI	GTAC	5 cut(s)	229, 925, 1024, 1183, 1299
RseI	CAYNNNNRTG	4 cut(s)	197, 627, 1010, 1109
SacI	GAGCTC	1 cut(s)	1217
SacII	CCGCGG	1 cut(s)	747
SalI	GTCGAC	1 cut(s)	1192
SaqAI	TTAA	3 cut(s)	288, 702, 906
Sau3AI	GATC	8 cut(s)	24, 58, 144, 385, 861, 1312, 1337, 1371
Sau96I	GGNCC	5 cut(s)	434, 501, 616, 974, 1046
SchI	GAGTC	3 cut(s)	88, 382, 1232
ScrFI	CCNGG	4 cut(s)	259, 1073, 1074, 1243
SduI	GDGCHC	2 cut(s)	1079, 1217
SfaNI	GCATC	2 cut(s)	14, 1014
SfcI	CTRYAG	4 cut(s)	62, 221, 738, 1032
Sfr303I	CCGCGG	1 cut(s)	747
SgrBI	CCGCGG	1 cut(s)	747
SinI	GGWCC	4 cut(s)	501, 616, 974, 1046
SmaI	CCCGGG	1 cut(s)	1074
SmiMI	CAYNNNNRTG	4 cut(s)	197, 627, 1010, 1109
SmlI	CTYRAG	2 cut(s)	140, 840
SmoI	CTYRAG	2 cut(s)	140, 840
Sse9I	AATT	5 cut(s)	110, 275, 640, 680, 699
SspMI	CTAG	5 cut(s)	396, 476, 498, 572, 998
SstI	GAGCTC	1 cut(s)	1217
StyD4I	CCNGG	4 cut(s)	257, 1071, 1072, 1241
StyI	CCWWGG	3 cut(s)	247, 497, 997
TaaI	ACNGT	5 cut(s)	509, 665, 887, 1046, 1392
TaiI	ACGT	3 cut(s)	139, 407, 1193
TaqI	TCGA	5 cut(s)	126, 147, 1193, 1263, 1315
TasI	AATT	5 cut(s)	110, 275, 640, 680, 699
TatI	WGTACW	2 cut(s)	924, 1182
TauI	GCSGC	7 cut(s)	559, 746, 749, 752, 755, 1005, 1018
TfiI	GAWTC	1 cut(s)	807
Tru1I	TTAA	3 cut(s)	288, 702, 906
Tru9I	TTAA	3 cut(s)	288, 702, 906
TscAI	CASTG	3 cut(s)	199, 270, 1036
TspDTI	ATGAA	6 cut(s)	268, 633, 684, 890, 915, 1341
TspGWI	ACGGA	2 cut(s)	516, 1363
TspMI	CCCGGG	1 cut(s)	1072
TspRI	CASTG	3 cut(s)	199, 270, 1036
VpaK11BI	GGWCC	4 cut(s)	501, 616, 974, 1046
VspI	ATTAAT	1 cut(s)	702
XapI	RAATTY	2 cut(s)	110, 275
XceI	RCATGY	1 cut(s)	1183
XcmI	CCANNNNNNNNNTGG	1 cut(s)	626
XmaI	CCCGGG	1 cut(s)	1072
XmaJI	CCTAGG	2 cut(s)	497, 997
XmiI	GTMKAC	1 cut(s)	1193
XspI	CTAG	5 cut(s)	396, 476, 498, 572, 998
ZraI	GACGTC	1 cut(s)	1191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.