MD02G1156500.v1.1

LYK5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0016730
Physical Location & Seq
Reverse (-)
13017781 .. 13019643
1863 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1156500.v1.1.491

Sequence Viewer

Length: 1863 bp
ATGGCCATCTCCTTCCTCTGCTCCAAACCTCTCTGTATTCTTCTGCTACTCCTCTTCTTCACTGCCCGAATTTTAGCTCAATCAACGCCATCCAACTCGAGCACAAGTTTCTCGTGCTCTGTAGATGCACCTCCTTCGTGTGACACGTACGTGTCCTACTTCGCCCGGCCTCAGTTTATGAGCCTGGAAAATATATCTCATCTATTCGGGGTCAGTCCCTTGTCGATTGCCAAGGCGAGTAATCTAGTTTCTGAGCACATCAGATTGATTGCAGGCCAACTCTTACTAGTTCCAATCAGCTGCGGTTGCTCTGGAAACAGTTACTTTTCTAACATCACATATGAGATCAAGAGCGGAGATAGCTTCTACTTAGTTTCAATCAATTCATTTGAGAATCTCACCGATTGGCATGAAGTGCTAAATATGAACCCAACTCTGGATCCGAGCCTCTTGCAGATTGGCCAGAAAGTCATCTTTCCTCTGTTCTGTAAGTGCCCCTCGAAGATGTATACGGAAAATGGAATCAAGTATCACATCACATACATATGGCAACCCAACGATGACATCAGTCGTGTGAGTTCCAGGTTCAATGTGTCAACACTTGACATCTCATCTGCAAATAACCTCCACAACGATAGCGCCGCAGTGGAACTTCCGGTGGTGATCCCCGTGTCAAGGTTGCCTGCTCTAGTTCAACCAAAACCCCCTCAAGGAAGAAACATATTCAAGCAGCGGTGGTGGCTTATTCTCATCATAATCTTGGGAGGTGTTCTATTAGTTTCTTCACTTTTGGCCATTTTTGCGGTGTATACTCGTCACCAACATAAGGTGAAGAAGGCTTTGGACGGTCCTGGTTCATCTCTGGAGAGCGCTGAATGGTTCAAAATGAAAGAAGGGAAAATTGATGAGAATTTTGACCTGAAGTTTATACAAGATAAGCTTCTTCCGGGAGTTTCAAGCTATCTTGGAAAGCCAATCATGTACGAGGTCAAAACGATTATGGAAGCAACCATGAATCTTAACGAGCACTGCAGAATTGGAGGGTCGGTATACAGAGCCATAGTTGACGGACAAGTCTTGGCTGTAAAGAACACTAAAGAAGATGTCACGGAGGAGCTAAATATTCTGCAGAAGGTAAATCATGCAAATTTGGTGAAGCTTATGGGAGTCTCATCTGAAACAGACGGGAGTCGCTTCTTGGTTTACGAATATGCTGCAAATGGATCACTTGATAAGTGGTTGTACTCCAAATCTTCGGCCACTTCAAGTTCTGCGGAGCTGCTCACGTGGAATCAGAGACTAAGTATAGCTCTAGATATCGCCAATGGCCTGCAATACATGCACGAACACACGCAGCGAAGCATTGTTCACATGGATATCAGGACGAGTAACATACTTCTCGACTCCAAATTCAAGGCCAAGATAGCAAATTTCTCCATGGCTAGAGCAGCTGCAAACGATGTCACCCCCAAAGTAGATGTTTTCGCTTTTGGGGTTGTACTTTTGGCCTTGCTTTCCGGAAAGAAAGGCATGGAAGCAAAAGAAAATGGAGAGGCTATCATGTTGTGGAAGGATGTTAGGTGGGTTTTGGAAGCCGAAGAGGAAAAAGTGGAGAGGTTGAGAAAATGGATGGATCCAAATTTGGAGAACTTCTATCCGATTGATGGGGCTTTGAGCTTGACAGCCTTGGCAAGGGCCTGCACACAGGAGAAGCCATCAACTAGACCAAGCATGGGAGAAGTTGTGTTCAACCTCTCTGTACTTACTCATTCGTCTTCTCAGTCGACATTGGAAAGGTCTTGGACTTCGGCGTTAGAAGCAGAAGAAGTTCTTGAAACTATCAGTCCAATCGCTGCTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006486 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009605 GO:0009607 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0032101 GO:0032103 GO:0034645 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043413 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0070085 GO:0071704 GO:0071944 GO:0080134 GO:0140096 GO:1900150 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902288 GO:1902290
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
LysM Pkinase Pkinase_Tyr

Protein Analysis

621

Amino Acids

68.99

Weight (kDa)

6.52

Isoelectric Point (pI)

45.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LysM1_NFP_LYK PF23446 46 - 103 5.2e-22 NFP/LYK LysM1 domain
LysM2_NFP PF23457 108 - 162 7.5e-27 NFP LysM2 domain
LysM3_NFP PF23462 177 - 224 3.8e-20 NFP LysM3 domain
Pkinase PF00069 360 - 487 4.2e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 486 1.8e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016730)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14270
malus_domestica MD02G1156500.v1.1
prunus_persica Prupe.7G147300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0102941
rosa_laevigata RLG00000017189
rosa_multiflora Rmu_sc0000388.1_g000044
rosa_roxburghii Rroxscaffold_2G00140080 Rroxscaffold_2G00140210
rosa_rugosa Rorug02G0110500
rosa_samantha Rh2AG158800 Rh2BG165200 Rh2CG165400 Rh2DG164000
rosa_wichuraiana Rw2G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1073
AccBSI CCGCTC 1 cut(s) 354
AccI GTMKAC 4 cut(s) 509, 809, 1050, 1784
AccIII TCCGGA 1 cut(s) 1517
AciI CCGC 6 cut(s) 303, 354, 642, 733, 803, 1274
AclWI GGATC 6 cut(s) 434, 447, 658, 1231, 1628, 1641
AcoI YGGCCR 4 cut(s) 3, 460, 792, 1257
AcsI RAATTY 6 cut(s) 69, 910, 1147, 1409, 1429, 1639
AcuI CTGAAG 1 cut(s) 941
AcvI CACGTG 1 cut(s) 1287
AfaI GTAC 5 cut(s) 149, 983, 1244, 1500, 1761
AfeI AGCGCT 1 cut(s) 871
AfiI CCNNNNNNNGG 7 cut(s) 436, 675, 710, 826, 1664, 1692, 1733
AflIII ACRYGT 2 cut(s) 144, 150
AhlI ACTAGT 1 cut(s) 286
AjnI CCWGG 3 cut(s) 183, 581, 850
AjuI GAANNNNNNNTTGG 2 cut(s) 824, 856
AleI CACNNNNGTG 1 cut(s) 149
Alw21I GWGCWC 4 cut(s) 104, 119, 258, 1029
Alw26I GTCTC 2 cut(s) 1174, 1291
AlwI GGATC 6 cut(s) 434, 447, 658, 1231, 1628, 1641
Ama87I CYCGRG 1 cut(s) 97
Aor13HI TCCGGA 1 cut(s) 1517
Aor51HI AGCGCT 1 cut(s) 871
ApeKI GCWGC 8 cut(s) 300, 730, 1214, 1279, 1354, 1448, 1451, 1853
ApoI RAATTY 6 cut(s) 69, 910, 1147, 1409, 1429, 1639
Asp700I GAANNNNTTC 1 cut(s) 1827
AspLEI GCGC 2 cut(s) 641, 872
AspS9I GGNCC 2 cut(s) 848, 1695
AsuC2I CCSGG 2 cut(s) 166, 948
AsuHPI GGTGA 6 cut(s) 391, 673, 809, 841, 1165, 1456
AvaI CYCGRG 1 cut(s) 97
AvaII GGWCC 1 cut(s) 848
BaeGI GKGCMC 1 cut(s) 497
BalI TGGCCA 3 cut(s) 5, 462, 794
BamHI GGATCC 2 cut(s) 439, 1633
BauI CACGAG 1 cut(s) 112
BbrPI CACGTG 1 cut(s) 1287
BbsI GAAGAC 1 cut(s) 1767
Bbv12I GWGCWC 4 cut(s) 104, 119, 258, 1029
BbvI GCAGC 8 cut(s) 287, 742, 1201, 1266, 1366, 1438, 1460, 1840
BccI CCATC 5 cut(s) 14, 97, 1624, 1658, 1723
BcgI CGANNNNNNTGC 6 cut(s) 117, 151, 433, 467, 1196, 1230
BciT130I CCWGG 3 cut(s) 185, 583, 852
BcnI CCSGG 2 cut(s) 166, 948
BcoDI GTCTC 2 cut(s) 1174, 1291
BcuI ACTAGT 1 cut(s) 286
BfaI CTAG 6 cut(s) 245, 287, 689, 1313, 1443, 1722
BfmI CTRYAG 3 cut(s) 120, 1030, 1127
BfoI RGCGCY 2 cut(s) 642, 873
BisI GCNGC 9 cut(s) 301, 642, 731, 1215, 1280, 1355, 1449, 1452, 1854
BlsI GCNGC 9 cut(s) 302, 643, 732, 1216, 1281, 1356, 1450, 1453, 1855
Bme1390I CCNGG 5 cut(s) 166, 185, 583, 852, 948
Bme18I GGWCC 1 cut(s) 848
BmeT110I CYCGRG 1 cut(s) 97
BmgT120I GGNCC 2 cut(s) 848, 1695
BmiI GGNNCC 2 cut(s) 441, 1635
BmrFI CCNGG 5 cut(s) 166, 185, 583, 852, 948
BmsI GCATC 1 cut(s) 115
BoxI GACNNNNGTC 2 cut(s) 567, 1188
BpiI GAAGAC 1 cut(s) 1767
BpmI CTGGAG 1 cut(s) 884
BpuEI CTTGAG 1 cut(s) 693
BpuMI CCSGG 2 cut(s) 166, 948
BsaAI YACGTR 3 cut(s) 147, 151, 1287
BsaJI CCNNGG 3 cut(s) 231, 1437, 1686
BsaWI WCCGGW 2 cut(s) 655, 1517
BsaXI ACNNNNNCTCC 4 cut(s) 1032, 1062, 1728, 1758
Bsc4I CCNNNNNNNGG 7 cut(s) 436, 675, 710, 826, 1664, 1692, 1733
BseAI TCCGGA 1 cut(s) 1517
BseBI CCWGG 3 cut(s) 185, 583, 852
BseDI CCNNGG 3 cut(s) 231, 1437, 1686
BseGI GGATG 3 cut(s) 89, 1579, 1635
BseLI CCNNNNNNNGG 7 cut(s) 436, 675, 710, 826, 1664, 1692, 1733
BseMII CTCAG 3 cut(s) 185, 243, 1793
BseRI GAGGAG 2 cut(s) 41, 1127
BseSI GKGCMC 1 cut(s) 497
BseXI GCAGC 8 cut(s) 287, 742, 1201, 1266, 1366, 1438, 1460, 1840
BsgI GTGCAG 1 cut(s) 1684
BsiHKAI GWGCWC 4 cut(s) 104, 119, 258, 1029
BsiHKCI CYCGRG 1 cut(s) 97
BsiSI CCGG 4 cut(s) 166, 656, 947, 1518
BsiWI CGTACG 1 cut(s) 147
BslFI GGGAC 1 cut(s) 201
BslI CCNNNNNNNGG 7 cut(s) 436, 675, 710, 826, 1664, 1692, 1733
BsmAI GTCTC 2 cut(s) 1174, 1291
BsmFI GGGAC 1 cut(s) 201
BsoBI CYCGRG 1 cut(s) 97
Bsp1286I GDGCHC 5 cut(s) 104, 119, 258, 497, 1029
Bsp13I TCCGGA 1 cut(s) 1517
Bsp143I GATC 5 cut(s) 345, 439, 663, 1223, 1633
Bsp19I CCATGG 1 cut(s) 1437
BspACI CCGC 6 cut(s) 303, 354, 642, 733, 803, 1274
BspCNI CTCAG 3 cut(s) 184, 244, 1792
BspEI TCCGGA 1 cut(s) 1517
BspLI GGNNCC 2 cut(s) 441, 1635
BspMAI CTGCAG 2 cut(s) 1034, 1131
BspPI GGATC 6 cut(s) 434, 447, 658, 1231, 1628, 1641
BsrBI CCGCTC 1 cut(s) 354
BssECI CCNNGG 3 cut(s) 231, 1437, 1686
BssMI GATC 5 cut(s) 345, 439, 663, 1223, 1633
BssNAI GTATAC 3 cut(s) 510, 810, 1051
BssSI CACGAG 1 cut(s) 112
BssT1I CCWWGG 3 cut(s) 231, 1437, 1686
Bst1107I GTATAC 3 cut(s) 510, 810, 1051
Bst2BI CACGAG 1 cut(s) 112
Bst2UI CCWGG 3 cut(s) 185, 583, 852
Bst4CI ACNGT 2 cut(s) 320, 848
Bst6I CTCTTC 2 cut(s) 59, 1593
BstAPI GCANNNNNTGC 2 cut(s) 415, 1339
BstBAI YACGTR 3 cut(s) 147, 151, 1287
BstC8I GCNNGC 4 cut(s) 274, 684, 1331, 1699
BstDEI CTNAG 5 cut(s) 171, 252, 370, 1301, 1779
BstDSI CCRYGG 1 cut(s) 1437
BstENI CCTNNNNNAGG 1 cut(s) 1690
BstF5I GGATG 3 cut(s) 89, 1579, 1635
BstH2I RGCGCY 2 cut(s) 642, 873
BstHHI GCGC 2 cut(s) 641, 872
BstKTI GATC 5 cut(s) 348, 442, 666, 1226, 1636
BstMAI GTCTC 2 cut(s) 1174, 1291
BstMBI GATC 5 cut(s) 345, 439, 663, 1223, 1633
BstMWI GCNNNNNNNGC 9 cut(s) 306, 360, 415, 739, 800, 1339, 1424, 1448, 1817
BstNI CCWGG 3 cut(s) 185, 583, 852
BstNSI RCATGY 1 cut(s) 1342
BstPAI GACNNNNGTC 2 cut(s) 567, 1188
BstSCI CCNGG 5 cut(s) 164, 183, 581, 850, 946
BstSFI CTRYAG 3 cut(s) 120, 1030, 1127
BstSLI GKGCMC 1 cut(s) 497
BstV1I GCAGC 8 cut(s) 287, 742, 1201, 1266, 1366, 1438, 1460, 1840
BstV2I GAAGAC 1 cut(s) 1767
BstX2I RGATCY 2 cut(s) 439, 1633
BstYI RGATCY 2 cut(s) 439, 1633
BstZ17I GTATAC 3 cut(s) 510, 810, 1051
BtgI CCRYGG 1 cut(s) 1437
BtsCI GGATG 3 cut(s) 89, 1579, 1635
BtsI GCAGTG 3 cut(s) 60, 651, 1027
BtsIMutI CAGTG 3 cut(s) 60, 651, 1027
Cac8I GCNNGC 4 cut(s) 274, 684, 1331, 1699
CfoI GCGC 2 cut(s) 641, 872
Cfr13I GGNCC 2 cut(s) 848, 1695
Csp6I GTAC 5 cut(s) 148, 982, 1243, 1499, 1760
CviQI GTAC 5 cut(s) 148, 982, 1243, 1499, 1760
DdeI CTNAG 5 cut(s) 171, 252, 370, 1301, 1779
DpnI GATC 5 cut(s) 347, 441, 665, 1225, 1635
DpnII GATC 5 cut(s) 345, 439, 663, 1223, 1633
DrdI GACNNNNNNGTC 1 cut(s) 1073
DseDI GACNNNNNNGTC 1 cut(s) 1073
EaeI YGGCCR 4 cut(s) 3, 460, 792, 1257
Eam1104I CTCTTC 2 cut(s) 59, 1593
EarI CTCTTC 2 cut(s) 59, 1593
Eco130I CCWWGG 3 cut(s) 231, 1437, 1686
Eco32I GATATC 2 cut(s) 1318, 1378
Eco47I GGWCC 1 cut(s) 848
Eco47III AGCGCT 1 cut(s) 871
Eco57I CTGAAG 1 cut(s) 941
Eco72I CACGTG 1 cut(s) 1287
Eco88I CYCGRG 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 1690
EcoO109I RGGNCCY 1 cut(s) 1695
EcoRII CCWGG 3 cut(s) 183, 581, 850
EcoRV GATATC 2 cut(s) 1318, 1378
EcoT14I CCWWGG 3 cut(s) 231, 1437, 1686
ErhI CCWWGG 3 cut(s) 231, 1437, 1686
FalI AAGNNNNNCTT 4 cut(s) 924, 956, 1815, 1847
FaqI GGGAC 1 cut(s) 201
FauNDI CATATG 2 cut(s) 340, 545
FblI GTMKAC 4 cut(s) 509, 809, 1050, 1784
Fnu4HI GCNGC 9 cut(s) 301, 642, 731, 1215, 1280, 1355, 1449, 1452, 1854
FokI GGATG 3 cut(s) 76, 1586, 1642
Fsp4HI GCNGC 9 cut(s) 301, 642, 731, 1215, 1280, 1355, 1449, 1452, 1854
FspBI CTAG 6 cut(s) 245, 287, 689, 1313, 1443, 1722
GlaI GCGC 2 cut(s) 640, 871
GluI GCNGC 9 cut(s) 301, 642, 731, 1215, 1280, 1355, 1449, 1452, 1854
GsuI CTGGAG 1 cut(s) 884
HaeII RGCGCY 2 cut(s) 642, 873
HapII CCGG 4 cut(s) 166, 656, 947, 1518
HhaI GCGC 2 cut(s) 641, 872
Hin6I GCGC 2 cut(s) 639, 870
HinP1I GCGC 2 cut(s) 639, 870
HincII GTYRAC 3 cut(s) 597, 1066, 1785
HindII GTYRAC 3 cut(s) 597, 1066, 1785
HindIII AAGCTT 2 cut(s) 938, 1157
HinfI GANTC 7 cut(s) 394, 522, 1015, 1167, 1189, 1291, 1403
HpaII CCGG 4 cut(s) 166, 656, 947, 1518
HphI GGTGA 6 cut(s) 391, 673, 809, 841, 1165, 1456
Hpy166II GTNNAC 8 cut(s) 510, 597, 810, 1051, 1066, 1204, 1369, 1785
Hpy188I TCNGA 6 cut(s) 253, 263, 444, 1177, 1296, 1659
Hpy188III TCNNGA 9 cut(s) 312, 349, 437, 863, 1313, 1381, 1400, 1518, 1832
Hpy8I GTNNAC 8 cut(s) 510, 597, 810, 1051, 1066, 1204, 1369, 1785
HpyAV CCTTC 6 cut(s) 22, 144, 829, 887, 1126, 1564
HpyCH4III ACNGT 2 cut(s) 320, 848
HpyCH4IV ACGT 3 cut(s) 146, 150, 1286
HpyF10VI GCNNNNNNNGC 9 cut(s) 306, 360, 415, 739, 800, 1339, 1424, 1448, 1817
HpyF3I CTNAG 5 cut(s) 171, 252, 370, 1301, 1779
HpySE526I ACGT 3 cut(s) 146, 150, 1286
HspAI GCGC 2 cut(s) 639, 870
Kpn2I TCCGGA 1 cut(s) 1517
Kzo9I GATC 5 cut(s) 345, 439, 663, 1223, 1633
LmnI GCTCC 3 cut(s) 26, 1114, 1276
Lsp1109I GCAGC 8 cut(s) 287, 742, 1201, 1266, 1366, 1438, 1460, 1840
LweI GCATC 1 cut(s) 115
MaeI CTAG 6 cut(s) 245, 287, 689, 1313, 1443, 1722
MaeII ACGT 3 cut(s) 146, 150, 1286
MaeIII GTNAC 6 cut(s) 140, 320, 815, 1105, 1388, 1462
MalI GATC 5 cut(s) 347, 441, 665, 1225, 1635
MbiI CCGCTC 1 cut(s) 354
MboI GATC 5 cut(s) 345, 439, 663, 1223, 1633
MflI RGATCY 2 cut(s) 439, 1633
MhlI GDGCHC 5 cut(s) 104, 119, 258, 497, 1029
MlsI TGGCCA 3 cut(s) 5, 462, 794
MluCI AATT 9 cut(s) 69, 382, 900, 910, 1035, 1147, 1409, 1429, 1639
MluNI TGGCCA 3 cut(s) 5, 462, 794
MlyI GAGTC 3 cut(s) 1176, 1198, 1397
MmeI TCCRAC 1 cut(s) 117
Mox20I TGGCCA 3 cut(s) 5, 462, 794
MroI TCCGGA 1 cut(s) 1517
MroXI GAANNNNTTC 1 cut(s) 1827
MscI TGGCCA 3 cut(s) 5, 462, 794
MseI TTAA 1 cut(s) 1020
MslI CAYNNNNRTG 2 cut(s) 149, 544
Msp20I TGGCCA 3 cut(s) 5, 462, 794
MspA1I CMGCKG 3 cut(s) 300, 733, 1451
MspI CCGG 4 cut(s) 166, 656, 947, 1518
MspR9I CCNGG 5 cut(s) 166, 185, 583, 852, 948
MvaI CCWGG 3 cut(s) 185, 583, 852
MwoI GCNNNNNNNGC 9 cut(s) 306, 360, 415, 739, 800, 1339, 1424, 1448, 1817
NciI CCSGG 2 cut(s) 166, 948
NcoI CCATGG 1 cut(s) 1437
NdeI CATATG 2 cut(s) 340, 545
NdeII GATC 5 cut(s) 345, 439, 663, 1223, 1633
NlaIV GGNNCC 2 cut(s) 441, 1635
NmuCI GTSAC 4 cut(s) 140, 815, 1105, 1462
NspI RCATGY 1 cut(s) 1342
OliI CACNNNNGTG 1 cut(s) 149
PaeR7I CTCGAG 1 cut(s) 97
PcsI WCGNNNNNNNCGW 1 cut(s) 143
PdmI GAANNNNTTC 1 cut(s) 1827
PfeI GAWTC 4 cut(s) 394, 522, 1015, 1291
Pfl23II CGTACG 1 cut(s) 147
PfoI TCCNGGA 1 cut(s) 946
PkrI GCNGC 9 cut(s) 302, 643, 732, 1216, 1281, 1356, 1450, 1453, 1855
PleI GAGTC 3 cut(s) 1175, 1197, 1397
PmaCI CACGTG 1 cut(s) 1287
PmlI CACGTG 1 cut(s) 1287
PpsI GAGTC 3 cut(s) 1175, 1197, 1397
Ppu21I YACGTR 3 cut(s) 147, 151, 1287
PshAI GACNNNNGTC 2 cut(s) 567, 1188
Psp6I CCWGG 3 cut(s) 183, 581, 850
PspCI CACGTG 1 cut(s) 1287
PspGI CCWGG 3 cut(s) 183, 581, 850
PspLI CGTACG 1 cut(s) 147
PspN4I GGNNCC 2 cut(s) 441, 1635
PspPI GGNCC 2 cut(s) 848, 1695
PspXI VCTCGAGB 1 cut(s) 97
PstI CTGCAG 2 cut(s) 1034, 1131
PsuI RGATCY 2 cut(s) 439, 1633
PvuII CAGCTG 2 cut(s) 300, 1451
RsaI GTAC 5 cut(s) 149, 983, 1244, 1500, 1761
RsaNI GTAC 5 cut(s) 148, 982, 1243, 1499, 1760
RseI CAYNNNNRTG 2 cut(s) 149, 544
SalI GTCGAC 1 cut(s) 1783
SaqAI TTAA 1 cut(s) 1020
SatI GCNGC 9 cut(s) 301, 642, 731, 1215, 1280, 1355, 1449, 1452, 1854
Sau3AI GATC 5 cut(s) 345, 439, 663, 1223, 1633
Sau96I GGNCC 2 cut(s) 848, 1695
SchI GAGTC 3 cut(s) 1176, 1198, 1397
ScrFI CCNGG 5 cut(s) 166, 185, 583, 852, 948
SduI GDGCHC 5 cut(s) 104, 119, 258, 497, 1029
SfaNI GCATC 1 cut(s) 115
SfcI CTRYAG 3 cut(s) 120, 1030, 1127
Sfr274I CTCGAG 1 cut(s) 97
SinI GGWCC 1 cut(s) 848
SlaI CTCGAG 1 cut(s) 97
SmiMI CAYNNNNRTG 2 cut(s) 149, 544
SmlI CTYRAG 2 cut(s) 97, 708
SmoI CTYRAG 2 cut(s) 97, 708
SpeI ACTAGT 1 cut(s) 286
Sse9I AATT 9 cut(s) 69, 382, 900, 910, 1035, 1147, 1409, 1429, 1639
SsiI CCGC 6 cut(s) 303, 354, 642, 733, 803, 1274
SspI AATATT 1 cut(s) 1123
SspMI CTAG 6 cut(s) 245, 287, 689, 1313, 1443, 1722
StyD4I CCNGG 5 cut(s) 164, 183, 581, 850, 946
StyI CCWWGG 3 cut(s) 231, 1437, 1686
TaaI ACNGT 2 cut(s) 320, 848
TaiI ACGT 3 cut(s) 149, 153, 1289
TaqI TCGA 5 cut(s) 98, 224, 500, 1401, 1784
TasI AATT 9 cut(s) 69, 382, 900, 910, 1035, 1147, 1409, 1429, 1639
TatI WGTACW 3 cut(s) 1242, 1498, 1759
TauI GCSGC 1 cut(s) 644
TfiI GAWTC 4 cut(s) 394, 522, 1015, 1291
Tru1I TTAA 1 cut(s) 1020
Tru9I TTAA 1 cut(s) 1020
TscAI CASTG 3 cut(s) 67, 651, 1034
TseFI GTSAC 4 cut(s) 140, 815, 1105, 1462
TseI GCWGC 8 cut(s) 300, 730, 1214, 1279, 1354, 1448, 1451, 1853
Tsp45I GTSAC 4 cut(s) 140, 815, 1105, 1462
TspDTI ATGAA 6 cut(s) 375, 426, 440, 846, 902, 1028
TspGWI ACGGA 3 cut(s) 527, 1083, 1124
TspRI CASTG 3 cut(s) 67, 651, 1034
VpaK11BI GGWCC 1 cut(s) 848
XagI CCTNNNNNAGG 1 cut(s) 1690
XapI RAATTY 6 cut(s) 69, 910, 1147, 1409, 1429, 1639
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 1 cut(s) 1342
XhoI CTCGAG 1 cut(s) 97
XmiI GTMKAC 4 cut(s) 509, 809, 1050, 1784
XmnI GAANNNNTTC 1 cut(s) 1827
XspI CTAG 6 cut(s) 245, 287, 689, 1313, 1443, 1722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.