Rw2G012410

LYK5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0016730
Physical Location & Seq
Reverse (-)
12918000 .. 12919931
1932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G012410.1

Sequence Viewer

Length: 1812 bp
ATGGCAATCTCCATACGCTCATCAATAGTCTGTATTCTGCTACTGTTCTTCTTCACCACTCAAATTTTAGCCCAGCCAGTACCACAGTCGAACTCGACCACAAACTTTTCATGGTATATGAACCTGGAAAACATATCTGATCTATTTGGGGTCAGTGTCTCATCAATTGCCAAGGCCAGTAATCTAGCTTCCAGTTACACAGGTCAGACCCGATTGGTTGCAGGCCAACTCTTACTAGTACCTATCACCTGTGGTTGCACTGAAAACCGGTCTTTTGCAAACATTACCTATCCGATCAAGAGTGGAGATAGCTACTATGTGGTTTCGATCAATACATTTGAGAATCTTACCAAATGGCAGTTAGTGCAAGAGATGAATCCAGCTCTGATTCCCACCCACTTGCAGATTGGTGACAAAGTGATTTTTCCTTTGTTCTGCAAATGTCCCTCGAAGACGAACTCAGATTTAATTCAGTATCTCATCACTTATGTCTGGCAGACTGATGATGACATCTTTAGAGTGGGTGCCAAGTTTAATGTTAAAGAATTTGAGATCTCAGACGCAAATAACCAGCGGGACTTCAGCAATTCAAGTGCAGTAGTGGGACAACCGGTGCTGATACCACTGACAGAGTTGCCTGCTCTATTCCAACCACTACCCCCTCATGGAAAACACAACTACCGGTTGATGCTTATTGTCATCATATGCTTGGGAGTTGCTCTATGTGTTGCTTCTCTTTTGGCAATTTTCGTGGTTTACACTCGTCGTCTGCACAAGAGACAGAAGCTTTTGAATGGTAAGAGTTTGTCTCTGGAAAGCGCTGAATGGTTCCGAATGAAAGAAGCAAAAGGTGAAGAGAAGATTGAGCTGAAGTTTGTACAGGACAAGCTTCTTCCTGGAGTTTCAAGCTATTTAGGAAAGGCAATCCTCTATGATATCAAAACAATTATGGAAGCAACCATGAATCTCAACGACCACCGTAGGATTGGAGGGTCTGTATACAGGGCTGTAATTGATGGGAAGGTCTTGGCTGTGAAGAAAACCAAGGAAGATGTCACTGAGGAACTAAATATCCTGCAGAAGGTAAATCATGCAAATCTGGTGAAACTTATGGGCATCTCATCTGAGATCGACGGGGATCGCTTCTTGGTTTATGAATATGCTGAAAATGGATCACTTGATAAATGGTTGCACTATAAATCTTCAAGCGGTTCAAGTTCTGGGGCATTCCTCACATGGAGTCAGAGATTAAGCATAGCTCTAGATGTTGCCAATGGCCTGCAATACATGCATGAACACACGCAACCGAGCATCGTTCACATGGATATAAGGACAAGTAACATACTTCTTGACTCCAAATACAAGGCCAAGATAGCAAACTTCTCCATGGCTAGAACGGCTGCAAACAGTGTTACACCAAAGGCGGATGTTTTCTCTTTCGGTGTTGTTCTGTTGTCTTTGCTTTCGGGGAAGAAAGGCATGGAAACAAAAGAGAATGGTGAGGTCATCATGTTGTGGAAGGATGTTAGGGGGGTTTTGGAAGCTGGAGAGAAAAAACAGGAGAGGTTGAGAGCATGGATGGATCCAACTTTGGAGAGTTTCTATCCCATTGATGGTGCTTTGAGCTTGACAGCCTTGGCAAGCGCATGCACACAGGAAAAGTCATCAGCAAGACCAAGCATGGCAGAAGTTGTCTTCAACCTCTCTGTTCTTACTCATTCATCGTCTGAGTCGACACTGGAGAGGTCTTGGAATTCTGCATTGGAAGCAGAAGAAGTTCTTCAAACTATCACTCCTATCAGAGCTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006486 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009605 GO:0009607 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0032101 GO:0032103 GO:0034645 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043413 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0070085 GO:0071704 GO:0071944 GO:0080134 GO:0140096 GO:1900150 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902288 GO:1902290
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
LysM Pkinase Pkinase_Tyr

Protein Analysis

603

Amino Acids

67.17

Weight (kDa)

8.24

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LysM1_NFP_LYK PF23446 38 - 87 1.4e-13 NFP/LYK LysM1 domain
LysM2_NFP PF23457 91 - 145 6.8e-27 NFP LysM2 domain
LysM2_CERK1_LYK3_4_5 PF23472 93 - 144 2.6e-08 LYK3/4/5 LysM2 domain
LysM3_NFP PF23462 159 - 208 1.4e-16 NFP LysM3 domain
Pkinase PF00069 341 - 470 2.6e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 346 - 468 9.6e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016730)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14270
malus_domestica MD02G1156500.v1.1
prunus_persica Prupe.7G147300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0102941
rosa_laevigata RLG00000017189
rosa_multiflora Rmu_sc0000388.1_g000044
rosa_roxburghii Rroxscaffold_2G00140080 Rroxscaffold_2G00140210
rosa_rugosa Rorug02G0110500
rosa_samantha Rh2AG158800 Rh2BG165200 Rh2CG165400 Rh2DG164000
rosa_wichuraiana Rw2G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 524
AccI GTMKAC 2 cut(s) 999, 1733
AciI CCGC 3 cut(s) 574, 1209, 1424
AclWI GGATC 4 cut(s) 1146, 1180, 1577, 1590
AcsI RAATTY 3 cut(s) 63, 545, 1753
AcuI CTGAAG 2 cut(s) 565, 890
AfaI GTAC 3 cut(s) 81, 240, 879
AfeI AGCGCT 1 cut(s) 820
AfiI CCNNNNNNNGG 3 cut(s) 665, 1081, 1613
AgeI ACCGGT 3 cut(s) 267, 610, 681
AgsI TTSAA 7 cut(s) 591, 793, 906, 1206, 1215, 1699, 1784
AhlI ACTAGT 1 cut(s) 235
AjnI CCWGG 2 cut(s) 123, 895
AjuI GAANNNNNNNTTGG 2 cut(s) 1745, 1777
AloI GAACNNNNNNTCC 2 cut(s) 1056, 1088
Alw21I GWGCWC 1 cut(s) 1807
Alw26I GTCTC 3 cut(s) 163, 772, 813
AlwI GGATC 4 cut(s) 1146, 1180, 1577, 1590
Aor51HI AGCGCT 1 cut(s) 820
AoxI GGCC 4 cut(s) 174, 223, 1276, 1365
ApeKI GCWGC 1 cut(s) 1400
ApoI RAATTY 3 cut(s) 63, 545, 1753
AsiGI ACCGGT 3 cut(s) 267, 610, 681
Asp700I GAANNNNTTC 2 cut(s) 1776, 1779
AspLEI GCGC 2 cut(s) 821, 1646
AsuHPI GGTGA 6 cut(s) 46, 238, 422, 863, 1114, 1511
BamHI GGATCC 1 cut(s) 1582
BanI GGYRCC 1 cut(s) 524
BanII GRGCYC 1 cut(s) 1807
BarI GAAGNNNNNNTAC 2 cut(s) 172, 204
BbsI GAAGAC 2 cut(s) 458, 1687
Bbv12I GWGCWC 1 cut(s) 1807
BbvI GCAGC 1 cut(s) 1387
BccI CCATC 3 cut(s) 1010, 1573, 1607
BceAI ACGGC 1 cut(s) 1413
BciT130I CCWGG 2 cut(s) 125, 897
BcoDI GTCTC 3 cut(s) 163, 772, 813
BcuI ACTAGT 1 cut(s) 235
BfaI CTAG 4 cut(s) 185, 236, 1262, 1392
BfmI CTRYAG 1 cut(s) 1076
BfoI RGCGCY 1 cut(s) 822
BglII AGATCT 1 cut(s) 552
BisI GCNGC 1 cut(s) 1401
BlsI GCNGC 1 cut(s) 1402
Bme1390I CCNGG 2 cut(s) 125, 897
BmiI GGNNCC 3 cut(s) 526, 830, 1584
BmrFI CCNGG 2 cut(s) 125, 897
BmsI GCATC 3 cut(s) 678, 1125, 1320
BpiI GAAGAC 2 cut(s) 458, 1687
BplI GAGNNNNNCTC 2 cut(s) 793, 825
BpmI CTGGAG 3 cut(s) 918, 1566, 1760
BsaJI CCNNGG 4 cut(s) 171, 1044, 1386, 1635
BsaWI WCCGGW 3 cut(s) 267, 610, 681
BsaXI ACNNNNNCTCC 4 cut(s) 981, 1011, 1777, 1807
Bsc4I CCNNNNNNNGG 3 cut(s) 665, 1081, 1613
Bse118I RCCGGY 3 cut(s) 267, 610, 681
Bse1I ACTGG 4 cut(s) 77, 177, 192, 1743
BseBI CCWGG 2 cut(s) 125, 897
BseDI CCNNGG 4 cut(s) 171, 1044, 1386, 1635
BseGI GGATG 3 cut(s) 1432, 1528, 1584
BseLI CCNNNNNNNGG 3 cut(s) 665, 1081, 1613
BseMII CTCAG 5 cut(s) 474, 570, 1050, 1116, 1719
BseNI ACTGG 4 cut(s) 77, 177, 192, 1743
BseXI GCAGC 1 cut(s) 1387
BseYI CCCAGC 1 cut(s) 72
BsgI GTGCAG 2 cut(s) 615, 755
BshFI GGCC 4 cut(s) 176, 225, 1278, 1367
BshNI GGYRCC 1 cut(s) 524
BshTI ACCGGT 3 cut(s) 267, 610, 681
BsiHKAI GWGCWC 1 cut(s) 1807
BsiSI CCGG 3 cut(s) 268, 611, 682
BslFI GGGAC 3 cut(s) 429, 590, 618
BslI CCNNNNNNNGG 3 cut(s) 665, 1081, 1613
BsmAI GTCTC 3 cut(s) 163, 772, 813
BsmFI GGGAC 3 cut(s) 429, 590, 618
BsmI GAATGC 1 cut(s) 1226
BsnI GGCC 4 cut(s) 176, 225, 1278, 1367
Bsp1286I GDGCHC 1 cut(s) 1807
Bsp1407I TGTACA 1 cut(s) 877
Bsp143I GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
Bsp19I CCATGG 1 cut(s) 1386
BspACI CCGC 3 cut(s) 574, 1209, 1424
BspANI GGCC 4 cut(s) 176, 225, 1278, 1367
BspCNI CTCAG 5 cut(s) 473, 569, 1051, 1117, 1720
BspLI GGNNCC 3 cut(s) 526, 830, 1584
BspMAI CTGCAG 1 cut(s) 1080
BspPI GGATC 4 cut(s) 1146, 1180, 1577, 1590
BspT107I GGYRCC 1 cut(s) 524
BsrFI RCCGGY 3 cut(s) 267, 610, 681
BsrGI TGTACA 1 cut(s) 877
BsrI ACTGG 4 cut(s) 77, 177, 192, 1743
BssAI RCCGGY 3 cut(s) 267, 610, 681
BssECI CCNNGG 4 cut(s) 171, 1044, 1386, 1635
BssMI GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
BssNAI GTATAC 1 cut(s) 1000
BssT1I CCWWGG 4 cut(s) 171, 1044, 1386, 1635
Bst1107I GTATAC 1 cut(s) 1000
Bst2UI CCWGG 2 cut(s) 125, 897
Bst4CI ACNGT 4 cut(s) 45, 87, 980, 1409
Bst6I CTCTTC 1 cut(s) 849
BstAPI GCANNNNNTGC 2 cut(s) 364, 1288
BstAUI TGTACA 1 cut(s) 877
BstC8I GCNNGC 6 cut(s) 223, 639, 1280, 1642, 1648, 1807
BstDEI CTNAG 5 cut(s) 460, 556, 1059, 1125, 1728
BstDSI CCRYGG 1 cut(s) 1386
BstENI CCTNNNNNAGG 1 cut(s) 1079
BstF5I GGATG 3 cut(s) 1432, 1528, 1584
BstH2I RGCGCY 1 cut(s) 822
BstHHI GCGC 2 cut(s) 821, 1646
BstKTI GATC 8 cut(s) 142, 297, 330, 555, 1131, 1141, 1175, 1585
BstMAI GTCTC 3 cut(s) 163, 772, 813
BstMBI GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
BstMWI GCNNNNNNNGC 5 cut(s) 364, 1288, 1373, 1397, 1766
BstNI CCWGG 2 cut(s) 125, 897
BstNSI RCATGY 2 cut(s) 1291, 1650
BstSCI CCNGG 2 cut(s) 123, 895
BstSFI CTRYAG 1 cut(s) 1076
BstV1I GCAGC 1 cut(s) 1387
BstV2I GAAGAC 2 cut(s) 458, 1687
BstX2I RGATCY 2 cut(s) 552, 1582
BstYI RGATCY 2 cut(s) 552, 1582
BstZ17I GTATAC 1 cut(s) 1000
BsuRI GGCC 4 cut(s) 176, 225, 1278, 1367
BtgI CCRYGG 1 cut(s) 1386
BtsCI GGATG 3 cut(s) 1432, 1528, 1584
BtsIMutI CAGTG 6 cut(s) 160, 258, 623, 1056, 1414, 1736
Cac8I GCNNGC 6 cut(s) 223, 639, 1280, 1642, 1648, 1807
CfoI GCGC 2 cut(s) 821, 1646
Cfr10I RCCGGY 3 cut(s) 267, 610, 681
CseI GACGC 1 cut(s) 569
Csp6I GTAC 3 cut(s) 80, 239, 878
CspAI ACCGGT 3 cut(s) 267, 610, 681
CspCI CAANNNNNGTGG 2 cut(s) 732, 767
CviQI GTAC 3 cut(s) 80, 239, 878
DdeI CTNAG 5 cut(s) 460, 556, 1059, 1125, 1728
DpnI GATC 8 cut(s) 141, 296, 329, 554, 1130, 1140, 1174, 1584
DpnII GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
Eam1104I CTCTTC 1 cut(s) 849
EarI CTCTTC 1 cut(s) 849
EciI GGCGGA 1 cut(s) 1439
Ecl136II GAGCTC 1 cut(s) 1805
Eco130I CCWWGG 4 cut(s) 171, 1044, 1386, 1635
Eco24I GRGCYC 1 cut(s) 1807
Eco32I GATATC 1 cut(s) 937
Eco47III AGCGCT 1 cut(s) 820
Eco53kI GAGCTC 1 cut(s) 1805
Eco57I CTGAAG 2 cut(s) 565, 890
EcoICRI GAGCTC 1 cut(s) 1805
EcoNI CCTNNNNNAGG 1 cut(s) 1079
EcoRI GAATTC 1 cut(s) 1753
EcoRII CCWGG 2 cut(s) 123, 895
EcoRV GATATC 1 cut(s) 937
EcoT14I CCWWGG 4 cut(s) 171, 1044, 1386, 1635
EcoT22I ATGCAT 1 cut(s) 1293
EcoT38I GRGCYC 1 cut(s) 1807
ErhI CCWWGG 4 cut(s) 171, 1044, 1386, 1635
FalI AAGNNNNNCTT 2 cut(s) 1764, 1796
FaqI GGGAC 3 cut(s) 429, 590, 618
FauI CCCGC 1 cut(s) 567
FauNDI CATATG 1 cut(s) 704
FblI GTMKAC 2 cut(s) 999, 1733
Fnu4HI GCNGC 1 cut(s) 1401
FokI GGATG 3 cut(s) 1439, 1535, 1591
FriOI GRGCYC 1 cut(s) 1807
Fsp4HI GCNGC 1 cut(s) 1401
FspBI CTAG 4 cut(s) 185, 236, 1262, 1392
GlaI GCGC 2 cut(s) 820, 1645
GluI GCNGC 1 cut(s) 1401
GsaI CCCAGC 1 cut(s) 76
GsuI CTGGAG 3 cut(s) 918, 1566, 1760
HaeII RGCGCY 1 cut(s) 822
HaeIII GGCC 4 cut(s) 176, 225, 1278, 1367
HapII CCGG 3 cut(s) 268, 611, 682
HgaI GACGC 1 cut(s) 569
HhaI GCGC 2 cut(s) 821, 1646
Hin6I GCGC 2 cut(s) 819, 1644
HinP1I GCGC 2 cut(s) 819, 1644
HincII GTYRAC 1 cut(s) 1734
HindII GTYRAC 1 cut(s) 1734
HindIII AAGCTT 2 cut(s) 785, 887
HinfI GANTC 7 cut(s) 343, 376, 388, 964, 1240, 1352, 1730
HpaII CCGG 3 cut(s) 268, 611, 682
HphI GGTGA 6 cut(s) 46, 238, 422, 863, 1114, 1511
Hpy166II GTNNAC 4 cut(s) 757, 1000, 1318, 1734
Hpy188III TCNNGA 4 cut(s) 298, 812, 1262, 1349
Hpy8I GTNNAC 4 cut(s) 757, 1000, 1318, 1734
Hpy99I CGWCG 2 cut(s) 768, 1136
HpyAV CCTTC 3 cut(s) 1015, 1075, 1513
HpyCH4III ACNGT 4 cut(s) 45, 87, 980, 1409
HpyF10VI GCNNNNNNNGC 5 cut(s) 364, 1288, 1373, 1397, 1766
HpyF3I CTNAG 5 cut(s) 460, 556, 1059, 1125, 1728
HspAI GCGC 2 cut(s) 819, 1644
Kzo9I GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
Lsp1109I GCAGC 1 cut(s) 1387
LweI GCATC 3 cut(s) 678, 1125, 1320
MaeI CTAG 4 cut(s) 185, 236, 1262, 1392
MaeIII GTNAC 5 cut(s) 194, 410, 1054, 1337, 1411
MalI GATC 8 cut(s) 141, 296, 329, 554, 1130, 1140, 1174, 1584
MboI GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
MfeI CAATTG 1 cut(s) 165
MflI RGATCY 2 cut(s) 552, 1582
MhlI GDGCHC 1 cut(s) 1807
MluCI AATT 9 cut(s) 63, 165, 468, 545, 586, 744, 945, 1011, 1753
MlyI GAGTC 3 cut(s) 1249, 1346, 1739
MmeI TCCRAC 2 cut(s) 673, 1610
Mph1103I ATGCAT 1 cut(s) 1293
MroXI GAANNNNTTC 2 cut(s) 1776, 1779
MseI TTAA 4 cut(s) 467, 534, 540, 1250
MspA1I CMGCKG 1 cut(s) 574
MspI CCGG 3 cut(s) 268, 611, 682
MspR9I CCNGG 2 cut(s) 125, 897
MunI CAATTG 1 cut(s) 165
Mva1269I GAATGC 1 cut(s) 1226
MvaI CCWGG 2 cut(s) 125, 897
MwoI GCNNNNNNNGC 5 cut(s) 364, 1288, 1373, 1397, 1766
NcoI CCATGG 1 cut(s) 1386
NdeI CATATG 1 cut(s) 704
NdeII GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
NlaIV GGNNCC 3 cut(s) 526, 830, 1584
NmuCI GTSAC 2 cut(s) 410, 1054
NsiI ATGCAT 1 cut(s) 1293
NspI RCATGY 2 cut(s) 1291, 1650
PaeI GCATGC 1 cut(s) 1650
PcsI WCGNNNNNNNCGW 1 cut(s) 1730
PctI GAATGC 1 cut(s) 1226
PdmI GAANNNNTTC 2 cut(s) 1776, 1779
PfeI GAWTC 4 cut(s) 343, 376, 388, 964
PfoI TCCNGGA 1 cut(s) 895
PinAI ACCGGT 3 cut(s) 267, 610, 681
PkrI GCNGC 1 cut(s) 1402
PleI GAGTC 3 cut(s) 1248, 1346, 1738
PpsI GAGTC 3 cut(s) 1248, 1346, 1738
Psp124BI GAGCTC 1 cut(s) 1807
Psp6I CCWGG 2 cut(s) 123, 895
PspFI CCCAGC 1 cut(s) 72
PspGI CCWGG 2 cut(s) 123, 895
PspN4I GGNNCC 3 cut(s) 526, 830, 1584
PstI CTGCAG 1 cut(s) 1080
PsuI RGATCY 2 cut(s) 552, 1582
RsaI GTAC 3 cut(s) 81, 240, 879
RsaNI GTAC 3 cut(s) 80, 239, 878
SacI GAGCTC 1 cut(s) 1807
SalI GTCGAC 1 cut(s) 1732
SaqAI TTAA 4 cut(s) 467, 534, 540, 1250
SatI GCNGC 1 cut(s) 1401
Sau3AI GATC 8 cut(s) 139, 294, 327, 552, 1128, 1138, 1172, 1582
SchI GAGTC 3 cut(s) 1249, 1346, 1739
ScrFI CCNGG 2 cut(s) 125, 897
SduI GDGCHC 1 cut(s) 1807
SfaNI GCATC 3 cut(s) 678, 1125, 1320
SfcI CTRYAG 1 cut(s) 1076
SpeI ACTAGT 1 cut(s) 235
SphI GCATGC 1 cut(s) 1650
Sse9I AATT 9 cut(s) 63, 165, 468, 545, 586, 744, 945, 1011, 1753
SsiI CCGC 3 cut(s) 574, 1209, 1424
SspMI CTAG 4 cut(s) 185, 236, 1262, 1392
SstI GAGCTC 1 cut(s) 1807
StyD4I CCNGG 2 cut(s) 123, 895
StyI CCWWGG 4 cut(s) 171, 1044, 1386, 1635
TaaI ACNGT 4 cut(s) 45, 87, 980, 1409
TaqI TCGA 6 cut(s) 89, 95, 326, 449, 1131, 1733
TasI AATT 9 cut(s) 63, 165, 468, 545, 586, 744, 945, 1011, 1753
TatI WGTACW 1 cut(s) 877
TfiI GAWTC 4 cut(s) 343, 376, 388, 964
Tru1I TTAA 4 cut(s) 467, 534, 540, 1250
Tru9I TTAA 4 cut(s) 467, 534, 540, 1250
TscAI CASTG 6 cut(s) 160, 265, 630, 1063, 1414, 1743
TseFI GTSAC 2 cut(s) 410, 1054
TseI GCWGC 1 cut(s) 1400
Tsp45I GTSAC 2 cut(s) 410, 1054
TspDTI ATGAA 8 cut(s) 99, 134, 389, 851, 977, 1170, 1308, 1710
TspRI CASTG 6 cut(s) 160, 265, 630, 1063, 1414, 1743
XagI CCTNNNNNAGG 1 cut(s) 1079
XapI RAATTY 3 cut(s) 63, 545, 1753
XbaI TCTAGA 1 cut(s) 1261
XceI RCATGY 2 cut(s) 1291, 1650
XcmI CCANNNNNNNNNTGG 2 cut(s) 404, 983
XmiI GTMKAC 2 cut(s) 999, 1733
XmnI GAANNNNTTC 2 cut(s) 1776, 1779
XspI CTAG 4 cut(s) 185, 236, 1262, 1392
Zsp2I ATGCAT 1 cut(s) 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.