RLG00000017189

LYK5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0016730
Physical Location & Seq
Reverse (-)
13973036 .. 13974913
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017189

Sequence Viewer

Length: 1878 bp
ATGGCAGTCTCCATCCGATGTTCATCAATAGTCTGTATTCTGCAACTGTTCTTCTTCACCACTCAAATTTTAGCCCAGCCAGTAGTGCCACAGTCGAACACAACCACAAACTTCTCATGTGCAGTAGATGCACCATCTTCATGCCAAACATATATAACTTACTTTGCACGGTCTCCAGGGTATATGAACCTGGAAAACATATCTGATCTATTTGGGGTCACTGTCTCATCAATTGCCAAGGCCAGTAATCTAGCTTCCAGTTACACAGGTCAGACCCAATTGGTTGCAGGCCAACTCTTACTAGTACCTATCACCTGTGGTTGCACTGAAAACCGGTCTTTTGCAAACATTACCTATCCGATCAAGAGTGGAGATAGCTACTACGTGGTTTCGATCAATACATTTGAGAATCTCACCAAATGGCAGTTAGTGCAAGAGATGAATCCAGCTCTGATTCCCACCCGCTTGCAGATTGGTGACAAAGTGATTTTTCCTTTGTTCTGCAAATGTCCCTCGAAAATGAACTCAGATTTAATTCAGTATCTCATCACTTATGTCTGGCAGACTGATGATGACATCGTTAGAGTGGGTGCCAAGTTTAATGTTAAAGAATTTGAGATCTCAGACGCAAATAACCAGCGGGACTTCAGCAATTCAAGTGCAGTAGTGGGACAACCGGTGCTGATACCACTGACAGAGTTGCCTGCTCTATTCCAACCACTACCCCCTCATGGAAAACACAACTACCGGTTGATGCTTATTGTCATCATATGCTTGGGAGTTGCTCTATGTGTTGCTTCTCTTTTGGCAATTTTCGTGGTTTACACTCGTCGTCTGTGCAAGAGACAGAAGCTTTTGAATGGTAAGAGTTTGTCTCTGGAAAGCGCTGAATGGTTCCGAATGAAAGAAGCAAAAAGTGAAGAGAAGATTGAGCTGAAGTTTGTACAGGACAAGCTTCTTCCTGGAGTTTCAAGCTATCTAGGAAAGGCAATCCTCTATGATATCAAAACAATTATGGAGGCAACCATGAATCTCAACGACCACTGTAGGATTGGAGGGTCTGTATACAGGGCTGTAATTGATGGGAAGGTCTTGGCTGTGAAGAAAACCAAGGAAGATGTCACTGAGGAACTAAATATCCTGCAGAAGGTAAATCATGCAAATCTGGTAAAACTTATGGGCATCTCATCTGAGATCGACGGGGATCGCTTCTTGGTTTATGAATATGCCGAAAATGGATCACTTGATAAATGGTTGCACTATAAATCTTCAACCAGTTCAAGTTCTGGGGCATTCCTCACATGGAGTCAGAGATTAAGCATCGCTCTAGATGTTGCCAATGGCCTGCAATACATGCATGAACACACGCAACCGAGCATCGTTCACATGGATATAAGGACAAGTAACATACTTCTTGACTCCAAATACAAGGCCAAGATAGCAAACTTCTCCATGGCTAGAACTGCTGCAAACAGTGTTACACCAAAGGCGGATGTTTTCTCTTTCGGTGTTGTTCTGTTGTCATTGCTTTCGGGGAAGAAAGGCATGGAAACTAAAGAGAATGGTGAGGTCATCATGTTGTGGAAGGATGTTAGGGGGGTTTTGGAAGCTGGAGAGAAAAAACAGGAGAGGTTGAGAGCATGGATGGATCCAACTTTGGAGAGTTTCTATCCCATTGATGGTGCTTTGAGCTTGACAGCCTTGGCAAGCGCATGCACACAGGAAAAGTCATCAGCAAGACCAAGCATGGCAGAAGTTGTCTTCAACCTCTCTGTTCTTACTCATTCATCGTCTGAGTCGACACTGGAGAGGTCTTGGAATTCTGCATTGGAAGCAGAAGAAGTTCTTCAAACTATCACTCCTATCAGAGCTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005775 GO:0005886 GO:0006464 GO:0006468 GO:0006486 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009605 GO:0009607 GO:0009617 GO:0009877 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0031974 GO:0032101 GO:0032103 GO:0034645 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043413 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070013 GO:0070085 GO:0071704 GO:0071944 GO:0080134 GO:0140096 GO:1900150 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902288 GO:1902290
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164
Pfam Domains
Protein Families
LysM Pkinase Pkinase_Tyr

Protein Analysis

626

Amino Acids

69.4

Weight (kDa)

7.85

Isoelectric Point (pI)

42.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LysM1_NFP_LYK PF23446 47 - 109 3.8e-22 NFP/LYK LysM1 domain
LysM2_NFP PF23457 113 - 167 7.2e-27 NFP LysM2 domain
LysM2_CERK1_LYK3_4_5 PF23472 115 - 166 4.5e-08 LYK3/4/5 LysM2 domain
LysM3_NFP PF23462 181 - 230 9.6e-17 NFP LysM3 domain
Pkinase PF00069 363 - 492 1.7e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 368 - 490 8.7e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016730)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g14270
malus_domestica MD02G1156500.v1.1
prunus_persica Prupe.7G147300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0102941
rosa_laevigata RLG00000017189
rosa_multiflora Rmu_sc0000388.1_g000044
rosa_roxburghii Rroxscaffold_2G00140080 Rroxscaffold_2G00140210
rosa_rugosa Rorug02G0110500
rosa_samantha Rh2AG158800 Rh2BG165200 Rh2CG165400 Rh2DG164000
rosa_wichuraiana Rw2G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 590
AccI GTMKAC 2 cut(s) 1065, 1799
AciI CCGC 3 cut(s) 463, 640, 1490
AclWI GGATC 4 cut(s) 1212, 1246, 1643, 1656
AcsI RAATTY 3 cut(s) 66, 611, 1819
AcuI CTGAAG 2 cut(s) 631, 956
AfaI GTAC 2 cut(s) 306, 945
AfeI AGCGCT 1 cut(s) 886
AfiI CCNNNNNNNGG 3 cut(s) 731, 1147, 1679
AgeI ACCGGT 3 cut(s) 333, 676, 747
AgsI TTSAA 7 cut(s) 657, 859, 972, 1272, 1281, 1765, 1850
AhlI ACTAGT 1 cut(s) 301
AjnI CCWGG 3 cut(s) 175, 189, 961
AjuI GAANNNNNNNTTGG 2 cut(s) 1811, 1843
AloI GAACNNNNNNTCC 2 cut(s) 1122, 1154
Alw21I GWGCWC 1 cut(s) 1873
Alw26I GTCTC 5 cut(s) 13, 177, 229, 838, 879
AlwI GGATC 4 cut(s) 1212, 1246, 1643, 1656
Aor51HI AGCGCT 1 cut(s) 886
AoxI GGCC 4 cut(s) 240, 289, 1342, 1431
ApeKI GCWGC 1 cut(s) 1466
ApoI RAATTY 3 cut(s) 66, 611, 1819
AsiGI ACCGGT 3 cut(s) 333, 676, 747
Asp700I GAANNNNTTC 2 cut(s) 1842, 1845
AspLEI GCGC 2 cut(s) 887, 1712
AsuHPI GGTGA 5 cut(s) 49, 304, 406, 488, 1577
BamHI GGATCC 1 cut(s) 1648
BanI GGYRCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 1873
BarI GAAGNNNNNNTAC 2 cut(s) 238, 270
BbsI GAAGAC 1 cut(s) 1753
Bbv12I GWGCWC 1 cut(s) 1873
BbvI GCAGC 1 cut(s) 1453
BccI CCATC 5 cut(s) 20, 142, 1076, 1639, 1673
BciT130I CCWGG 3 cut(s) 177, 191, 963
BcoDI GTCTC 5 cut(s) 13, 177, 229, 838, 879
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 5 cut(s) 251, 302, 980, 1328, 1458
BfmI CTRYAG 2 cut(s) 1045, 1142
BfoI RGCGCY 1 cut(s) 888
BglII AGATCT 1 cut(s) 618
BisI GCNGC 1 cut(s) 1467
BlsI GCNGC 1 cut(s) 1468
Bme1390I CCNGG 3 cut(s) 177, 191, 963
BmiI GGNNCC 3 cut(s) 592, 896, 1650
BmrFI CCNGG 3 cut(s) 177, 191, 963
BmsI GCATC 5 cut(s) 118, 744, 1191, 1329, 1386
BpiI GAAGAC 1 cut(s) 1753
BplI GAGNNNNNCTC 2 cut(s) 859, 891
BpmI CTGGAG 4 cut(s) 159, 984, 1632, 1826
BsaAI YACGTR 1 cut(s) 385
BsaBI GATNNNNATC 1 cut(s) 22
BsaI GGTCTC 1 cut(s) 177
BsaJI CCNNGG 5 cut(s) 176, 237, 1110, 1452, 1701
BsaWI WCCGGW 3 cut(s) 333, 676, 747
BsaXI ACNNNNNCTCC 4 cut(s) 1047, 1077, 1843, 1873
Bsc4I CCNNNNNNNGG 3 cut(s) 731, 1147, 1679
Bse118I RCCGGY 3 cut(s) 333, 676, 747
Bse1I ACTGG 5 cut(s) 80, 243, 258, 1275, 1809
Bse3DI GCAATG 1 cut(s) 1523
Bse8I GATNNNNATC 1 cut(s) 22
BseBI CCWGG 3 cut(s) 177, 191, 963
BseDI CCNNGG 5 cut(s) 176, 237, 1110, 1452, 1701
BseGI GGATG 4 cut(s) 12, 1498, 1594, 1650
BseJI GATNNNNATC 1 cut(s) 22
BseLI CCNNNNNNNGG 3 cut(s) 731, 1147, 1679
BseMI GCAATG 1 cut(s) 1523
BseMII CTCAG 5 cut(s) 540, 636, 1116, 1182, 1785
BseNI ACTGG 5 cut(s) 80, 243, 258, 1275, 1809
BseXI GCAGC 1 cut(s) 1453
BseYI CCCAGC 1 cut(s) 75
BsgI GTGCAG 2 cut(s) 141, 681
BshFI GGCC 4 cut(s) 242, 291, 1344, 1433
BshNI GGYRCC 1 cut(s) 590
BshTI ACCGGT 3 cut(s) 333, 676, 747
BsiHKAI GWGCWC 1 cut(s) 1873
BsiSI CCGG 3 cut(s) 334, 677, 748
BslFI GGGAC 3 cut(s) 495, 656, 684
BslI CCNNNNNNNGG 3 cut(s) 731, 1147, 1679
BsmAI GTCTC 5 cut(s) 13, 177, 229, 838, 879
BsmFI GGGAC 3 cut(s) 495, 656, 684
BsmI GAATGC 1 cut(s) 1292
BsnI GGCC 4 cut(s) 242, 291, 1344, 1433
Bso31I GGTCTC 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 1873
Bsp1407I TGTACA 1 cut(s) 943
Bsp143I GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
Bsp19I CCATGG 1 cut(s) 1452
BspACI CCGC 3 cut(s) 463, 640, 1490
BspANI GGCC 4 cut(s) 242, 291, 1344, 1433
BspCNI CTCAG 5 cut(s) 539, 635, 1117, 1183, 1786
BspLI GGNNCC 3 cut(s) 592, 896, 1650
BspMAI CTGCAG 1 cut(s) 1146
BspPI GGATC 4 cut(s) 1212, 1246, 1643, 1656
BspT107I GGYRCC 1 cut(s) 590
BspTNI GGTCTC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 1523
BsrFI RCCGGY 3 cut(s) 333, 676, 747
BsrGI TGTACA 1 cut(s) 943
BsrI ACTGG 5 cut(s) 80, 243, 258, 1275, 1809
BssAI RCCGGY 3 cut(s) 333, 676, 747
BssECI CCNNGG 5 cut(s) 176, 237, 1110, 1452, 1701
BssMI GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
BssNAI GTATAC 1 cut(s) 1066
BssT1I CCWWGG 4 cut(s) 237, 1110, 1452, 1701
Bst1107I GTATAC 1 cut(s) 1066
Bst2UI CCWGG 3 cut(s) 177, 191, 963
Bst4CI ACNGT 6 cut(s) 48, 93, 171, 223, 1046, 1475
Bst6I CTCTTC 1 cut(s) 915
BstAPI GCANNNNNTGC 3 cut(s) 128, 430, 1354
BstAUI TGTACA 1 cut(s) 943
BstBAI YACGTR 1 cut(s) 385
BstC8I GCNNGC 7 cut(s) 289, 467, 705, 1346, 1708, 1714, 1873
BstDEI CTNAG 5 cut(s) 526, 622, 1125, 1191, 1794
BstDSI CCRYGG 1 cut(s) 1452
BstENI CCTNNNNNAGG 1 cut(s) 1145
BstF5I GGATG 4 cut(s) 12, 1498, 1594, 1650
BstH2I RGCGCY 1 cut(s) 888
BstHHI GCGC 2 cut(s) 887, 1712
BstKTI GATC 8 cut(s) 208, 363, 396, 621, 1197, 1207, 1241, 1651
BstMAI GTCTC 5 cut(s) 13, 177, 229, 838, 879
BstMBI GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
BstMWI GCNNNNNNNGC 7 cut(s) 85, 128, 430, 1354, 1439, 1463, 1832
BstNI CCWGG 3 cut(s) 177, 191, 963
BstNSI RCATGY 2 cut(s) 1357, 1716
BstSCI CCNGG 3 cut(s) 175, 189, 961
BstSFI CTRYAG 2 cut(s) 1045, 1142
BstV1I GCAGC 1 cut(s) 1453
BstV2I GAAGAC 1 cut(s) 1753
BstX2I RGATCY 2 cut(s) 618, 1648
BstYI RGATCY 2 cut(s) 618, 1648
BstZ17I GTATAC 1 cut(s) 1066
BsuRI GGCC 4 cut(s) 242, 291, 1344, 1433
BtgI CCRYGG 1 cut(s) 1452
BtgZI GCGATG 1 cut(s) 1306
BtsCI GGATG 4 cut(s) 12, 1498, 1594, 1650
BtsIMutI CAGTG 7 cut(s) 219, 324, 689, 1042, 1122, 1480, 1802
Cac8I GCNNGC 7 cut(s) 289, 467, 705, 1346, 1708, 1714, 1873
CfoI GCGC 2 cut(s) 887, 1712
Cfr10I RCCGGY 3 cut(s) 333, 676, 747
CseI GACGC 1 cut(s) 635
Csp6I GTAC 2 cut(s) 305, 944
CspAI ACCGGT 3 cut(s) 333, 676, 747
CspCI CAANNNNNGTGG 2 cut(s) 798, 833
CviQI GTAC 2 cut(s) 305, 944
DdeI CTNAG 5 cut(s) 526, 622, 1125, 1191, 1794
DpnI GATC 8 cut(s) 207, 362, 395, 620, 1196, 1206, 1240, 1650
DpnII GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
Eam1104I CTCTTC 1 cut(s) 915
EarI CTCTTC 1 cut(s) 915
EciI GGCGGA 1 cut(s) 1505
Ecl136II GAGCTC 1 cut(s) 1871
Eco130I CCWWGG 4 cut(s) 237, 1110, 1452, 1701
Eco24I GRGCYC 1 cut(s) 1873
Eco31I GGTCTC 1 cut(s) 177
Eco32I GATATC 1 cut(s) 1003
Eco47III AGCGCT 1 cut(s) 886
Eco53kI GAGCTC 1 cut(s) 1871
Eco57I CTGAAG 2 cut(s) 631, 956
EcoICRI GAGCTC 1 cut(s) 1871
EcoNI CCTNNNNNAGG 1 cut(s) 1145
EcoRI GAATTC 1 cut(s) 1819
EcoRII CCWGG 3 cut(s) 175, 189, 961
EcoRV GATATC 1 cut(s) 1003
EcoT14I CCWWGG 4 cut(s) 237, 1110, 1452, 1701
EcoT22I ATGCAT 1 cut(s) 1359
EcoT38I GRGCYC 1 cut(s) 1873
ErhI CCWWGG 4 cut(s) 237, 1110, 1452, 1701
FalI AAGNNNNNCTT 2 cut(s) 1830, 1862
FaqI GGGAC 3 cut(s) 495, 656, 684
FauI CCCGC 2 cut(s) 470, 633
FauNDI CATATG 1 cut(s) 770
FblI GTMKAC 2 cut(s) 1065, 1799
Fnu4HI GCNGC 1 cut(s) 1467
FokI GGATG 3 cut(s) 1505, 1601, 1657
FriOI GRGCYC 1 cut(s) 1873
Fsp4HI GCNGC 1 cut(s) 1467
FspBI CTAG 5 cut(s) 251, 302, 980, 1328, 1458
GlaI GCGC 2 cut(s) 886, 1711
GluI GCNGC 1 cut(s) 1467
GsaI CCCAGC 1 cut(s) 79
GsuI CTGGAG 4 cut(s) 159, 984, 1632, 1826
HaeII RGCGCY 1 cut(s) 888
HaeIII GGCC 4 cut(s) 242, 291, 1344, 1433
HapII CCGG 3 cut(s) 334, 677, 748
HgaI GACGC 1 cut(s) 635
HhaI GCGC 2 cut(s) 887, 1712
Hin6I GCGC 2 cut(s) 885, 1710
HinP1I GCGC 2 cut(s) 885, 1710
HincII GTYRAC 1 cut(s) 1800
HindII GTYRAC 1 cut(s) 1800
HindIII AAGCTT 2 cut(s) 851, 953
HinfI GANTC 7 cut(s) 409, 442, 454, 1030, 1306, 1418, 1796
HpaII CCGG 3 cut(s) 334, 677, 748
HphI GGTGA 5 cut(s) 49, 304, 406, 488, 1577
Hpy166II GTNNAC 4 cut(s) 823, 1066, 1384, 1800
Hpy188III TCNNGA 4 cut(s) 364, 878, 1328, 1415
Hpy8I GTNNAC 4 cut(s) 823, 1066, 1384, 1800
Hpy99I CGWCG 2 cut(s) 834, 1202
HpyAV CCTTC 3 cut(s) 1081, 1141, 1579
HpyCH4III ACNGT 6 cut(s) 48, 93, 171, 223, 1046, 1475
HpyCH4IV ACGT 1 cut(s) 384
HpyF10VI GCNNNNNNNGC 7 cut(s) 85, 128, 430, 1354, 1439, 1463, 1832
HpyF3I CTNAG 5 cut(s) 526, 622, 1125, 1191, 1794
HpySE526I ACGT 1 cut(s) 384
HspAI GCGC 2 cut(s) 885, 1710
Kzo9I GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
Lsp1109I GCAGC 1 cut(s) 1453
LweI GCATC 5 cut(s) 118, 744, 1191, 1329, 1386
MaeI CTAG 5 cut(s) 251, 302, 980, 1328, 1458
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 6 cut(s) 217, 260, 476, 1120, 1403, 1477
MalI GATC 8 cut(s) 207, 362, 395, 620, 1196, 1206, 1240, 1650
MboI GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
MfeI CAATTG 2 cut(s) 231, 278
MflI RGATCY 2 cut(s) 618, 1648
MhlI GDGCHC 1 cut(s) 1873
MlyI GAGTC 3 cut(s) 1315, 1412, 1805
MmeI TCCRAC 2 cut(s) 739, 1676
Mph1103I ATGCAT 1 cut(s) 1359
MroXI GAANNNNTTC 2 cut(s) 1842, 1845
MseI TTAA 4 cut(s) 533, 600, 606, 1316
MslI CAYNNNNRTG 1 cut(s) 139
MspA1I CMGCKG 1 cut(s) 640
MspI CCGG 3 cut(s) 334, 677, 748
MspR9I CCNGG 3 cut(s) 177, 191, 963
MunI CAATTG 2 cut(s) 231, 278
Mva1269I GAATGC 1 cut(s) 1292
MvaI CCWGG 3 cut(s) 177, 191, 963
MwoI GCNNNNNNNGC 7 cut(s) 85, 128, 430, 1354, 1439, 1463, 1832
NcoI CCATGG 1 cut(s) 1452
NdeI CATATG 1 cut(s) 770
NdeII GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
NlaIV GGNNCC 3 cut(s) 592, 896, 1650
NmuCI GTSAC 3 cut(s) 217, 476, 1120
NsiI ATGCAT 1 cut(s) 1359
NspI RCATGY 2 cut(s) 1357, 1716
PaeI GCATGC 1 cut(s) 1716
PcsI WCGNNNNNNNCGW 1 cut(s) 1796
PctI GAATGC 1 cut(s) 1292
PdmI GAANNNNTTC 2 cut(s) 1842, 1845
PfeI GAWTC 4 cut(s) 409, 442, 454, 1030
PfoI TCCNGGA 1 cut(s) 961
PinAI ACCGGT 3 cut(s) 333, 676, 747
PkrI GCNGC 1 cut(s) 1468
PleI GAGTC 3 cut(s) 1314, 1412, 1804
PpsI GAGTC 3 cut(s) 1314, 1412, 1804
Ppu21I YACGTR 1 cut(s) 385
Psp124BI GAGCTC 1 cut(s) 1873
Psp6I CCWGG 3 cut(s) 175, 189, 961
PspFI CCCAGC 1 cut(s) 75
PspGI CCWGG 3 cut(s) 175, 189, 961
PspN4I GGNNCC 3 cut(s) 592, 896, 1650
PstI CTGCAG 1 cut(s) 1146
PsuI RGATCY 2 cut(s) 618, 1648
RsaI GTAC 2 cut(s) 306, 945
RsaNI GTAC 2 cut(s) 305, 944
RseI CAYNNNNRTG 1 cut(s) 139
SacI GAGCTC 1 cut(s) 1873
SalI GTCGAC 1 cut(s) 1798
SaqAI TTAA 4 cut(s) 533, 600, 606, 1316
SatI GCNGC 1 cut(s) 1467
Sau3AI GATC 8 cut(s) 205, 360, 393, 618, 1194, 1204, 1238, 1648
SchI GAGTC 3 cut(s) 1315, 1412, 1805
ScrFI CCNGG 3 cut(s) 177, 191, 963
SduI GDGCHC 1 cut(s) 1873
SfaNI GCATC 5 cut(s) 118, 744, 1191, 1329, 1386
SfcI CTRYAG 2 cut(s) 1045, 1142
SmiMI CAYNNNNRTG 1 cut(s) 139
SpeI ACTAGT 1 cut(s) 301
SphI GCATGC 1 cut(s) 1716
SsiI CCGC 3 cut(s) 463, 640, 1490
SspMI CTAG 5 cut(s) 251, 302, 980, 1328, 1458
SstI GAGCTC 1 cut(s) 1873
StyD4I CCNGG 3 cut(s) 175, 189, 961
StyI CCWWGG 4 cut(s) 237, 1110, 1452, 1701
TaaI ACNGT 6 cut(s) 48, 93, 171, 223, 1046, 1475
TaiI ACGT 1 cut(s) 387
TaqI TCGA 5 cut(s) 95, 392, 515, 1197, 1799
TatI WGTACW 1 cut(s) 943
TfiI GAWTC 4 cut(s) 409, 442, 454, 1030
Tru1I TTAA 4 cut(s) 533, 600, 606, 1316
Tru9I TTAA 4 cut(s) 533, 600, 606, 1316
TscAI CASTG 7 cut(s) 226, 331, 696, 1049, 1129, 1480, 1809
TseFI GTSAC 3 cut(s) 217, 476, 1120
TseI GCWGC 1 cut(s) 1466
Tsp45I GTSAC 3 cut(s) 217, 476, 1120
TspRI CASTG 7 cut(s) 226, 331, 696, 1049, 1129, 1480, 1809
XagI CCTNNNNNAGG 1 cut(s) 1145
XapI RAATTY 3 cut(s) 66, 611, 1819
XbaI TCTAGA 1 cut(s) 1327
XceI RCATGY 2 cut(s) 1357, 1716
XcmI CCANNNNNNNNNTGG 1 cut(s) 1049
XmiI GTMKAC 2 cut(s) 1065, 1799
XmnI GAANNNNTTC 2 cut(s) 1842, 1845
XspI CTAG 5 cut(s) 251, 302, 980, 1328, 1458
Zsp2I ATGCAT 1 cut(s) 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.