Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006820

Physical Location & Seq

Genomic Coordinates Forward (+)

5728208 .. 5734228

Gene Structure 6021 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1070200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGCCTGCTTGGTGGGGAAGAAAATCAAGCAAGAGCAAAGAAGAGCAAGAGAAGGCAGTCCAGCATAAAAACCCCTACTCTAACCGCAACAGCAACAACTTTGTCATCAAATCTTCGACCAGTAACGATATTAAGAACAAGGAGAAGGACGAAAGGCCGAGGAGCTTCGATGAGCATGTAACGCGGAGATCACCCAGAGCCAGCAGGGAATTTGCTGGCCCTGTTGGTGTCTCTTCTTCTGGCTTTTTGGGTTTTGACTCAGACGGCGGTGAGAGAGCGGCTCATCCCCTGCCTCGCCCATCGGTATCGTCCCTGCAGGGTTTGCCTTTGGGAAATGATCAGGGGAATGGGTTAGGATCTGGGTCCGCCTCTTTATCAAGCGTCAGCTCCTCTGGCTCTGACGACCCACCGGTTGCTCAATGCGGTGCTGCTTCCAGCTATAGATTTATTGGTGATCCAAAGGCCAGCATGATGCCGAAAAGCCCAGGTCCTAGGTCTAGGGGGCCAACTAGTCCAACATCTCCTCTTCATCCACGATTATGTGCCATGAGTTTGGAGTCTCCAACAGGAAAGCAAGAAGATGGCAAAAGTGTGTGTCATCCTCTTCCGCTCCCTCCGGGTTCTCCAACTAGCCCTTTTGCCTCGCCCAGCAGTAGAACTAGTCCAGTGACTGAAAACTCAACTTGTGCGCTATCAAAGTGGAAGAAGGGAAAGCTTTTAGGAAGAGGGACCTTTGGCCATGTTTATGTCGGATTTAACAGTGAAAGTGGGCAAATGTGTGCAATTAAAGAAGTCAGGCTTGTTACAGATGATCAATCATTAAAAGAATGTCTTAAGCAACTGAACCAGGAGATAAATTTGCTTAGTCAGCTCTCACATCCAAACATCGTTCGATATTATGGAAGTGAATTGGGTGAAGATGCACTCTCTGTTTATTTGGAATATGTGTCTGGTGGCTCAATTTATAAACTACTACAAGAATATGGTGCCTTTAAGGAACCTGTGATTCAAAATTATACCAGACAGATTGTATCTGGTCTTGCCTACTTACACGAAAGAAATACAGTTCATAGGGACATCAAAGGAGCAAACATATTAGTGGGTCCTAATGGTGAAATCAAGTTGGCAGACTTTGGCATGGCTAAACATATCACAAATTGTGCTTCAATGCTGTCATTCAAGGGAAGTCCTTATTGGATGGCCCCAGAGGTCGTAATGAATACGAACGGTTATAGCCTTGCCGTGGATATATGGAGCTTAGGATGTACAATTCTTGAAATGGCAACTTCTAAACCTCCTTGGAGCCAGTACGAAGGGGTGGCTGCAATTTTTAAAATTGGAAACAGCAAAGATATTCCACATATTCCTGATCATCTTTCAAACGAGGCAAAGAGTTTTGTGAGGCTATGTTTGCAACGGAACCCATCGGAGCGTCCTACGGCTTCTGGACTTCTAGACCACCCTTTCATTAGGGAGCAAACAACGACAAGATCTTCTAACATCAAAGTAACCAAGGATGCCTTCCCATATGCTTTTCACGGAAGCAGGACGCCGCCAGTATTAGAGCTACACTCCAACAGAACAAGTTTCACCTTGAGTGATGCAGATCACACAGCAAAGCCCACAATCGCAACTTCAAGAGATTGGCGGAGCCCTAGCGAGAATATAAGGATGATTACATCTTTGCCTGTATCTCCTTGTTCAAGCCCCTTACGACAATATGGACAGACACACAAGAGCTCGTTACTTTCTCCTCCTCATCCAACTTATGCCATGATGGGACAAAGTAGTTACAATTTGAGCGACTACTCATCGTATAACAAGCTAAGTCCTACTACGTCGTACACTCTTGATCCCTGGCAGGAAACAACGCTACTTAAAGCTCAAACGCTCGGCAGTTCACCAAGAGCAAGACCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04010 ko04540 ko04912 map04010 map04540 map04912

Pfam Domains

Protein Families

Pkinase

Protein Analysis

641

Amino Acids

69.86

Weight (kDa)

9.15

Isoelectric Point (pI)

53.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	235 - 490	4.5e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	236 - 484	6.2e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570
fragaria_vesca	FvH4_1g24310 FvH4_1g24310
malus_domestica	MD03G1070200.v1.1 MD11G1074000.v1.1
prunus_persica	Prupe.4G270800_v2.0.a1 Prupe.4G270800_v2.0.a1
pyrus_communis	pycom03g05590 pycom11g06140
rosa_chinensis	RchiOBHm_Chr2g0120811
rosa_laevigata	RLG00000018589
rosa_multiflora	Rmu_sc0000621.1_g000004 Rmu_sc0014626.1_g000001
rosa_roxburghii	Rroxscaffold_2G00122820
rosa_rugosa	Rorug02G0231400 Rorug02G0231500
rosa_samantha	Rh2BG299400 Rh2CG277400 Rh2DG313300
rosa_wichuraiana	Rw2G023090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	966
AccB1I	GGYRCC	1 cut(s)	986
AccBSI	CCGCTC	2 cut(s)	278, 610
AccII	CGCG	1 cut(s)	184
AciI	CCGC	9 cut(s)	85, 184, 267, 278, 366, 423, 608, 1553, 1648
AclWI	GGATC	3 cut(s)	364, 449, 1847
AcoI	YGGCCR	1 cut(s)	736
AcsI	RAATTY	2 cut(s)	209, 856
AcyI	GRCGYC	1 cut(s)	1550
AfaI	GTAC	3 cut(s)	1267, 1310, 1844
AfiI	CCNNNNNNNGG	1 cut(s)	1243
AflII	CTTAAG	1 cut(s)	833
AgeI	ACCGGT	1 cut(s)	409
AgsI	TTSAA	7 cut(s)	1010, 1167, 1180, 1277, 1380, 1638, 1704
AhlI	ACTAGT	2 cut(s)	509, 659
AjnI	CCWGG	3 cut(s)	484, 846, 1856
AjuI	GAANNNNNNNTTGG	4 cut(s)	1177, 1209, 1505, 1537
Alw21I	GWGCWC	1 cut(s)	1742
Alw26I	GTCTC	2 cut(s)	235, 564
AlwI	GGATC	3 cut(s)	364, 449, 1847
AlwNI	CAGNNNCTG	1 cut(s)	671
AoxI	GGCC	6 cut(s)	155, 217, 462, 503, 736, 1200
ApeKI	GCWGC	2 cut(s)	428, 1322
ApoI	RAATTY	2 cut(s)	209, 856
AsiGI	ACCGGT	1 cut(s)	409
AspA2I	CCTAGG	1 cut(s)	491
AspLEI	GCGC	1 cut(s)	691
AspS9I	GGNCC	7 cut(s)	218, 363, 488, 503, 729, 1103, 1201
AsuC2I	CCSGG	1 cut(s)	618
AsuHPI	GGTGA	7 cut(s)	183, 281, 464, 926, 1124, 1582, 1893
AvaII	GGWCC	4 cut(s)	363, 488, 729, 1103
AvrII	CCTAGG	1 cut(s)	491
BalI	TGGCCA	1 cut(s)	738
BanI	GGYRCC	1 cut(s)	986
BanII	GRGCYC	2 cut(s)	1655, 1742
Bbv12I	GWGCWC	1 cut(s)	1742
BbvI	GCAGC	2 cut(s)	415, 1309
BccI	CCATC	5 cut(s)	307, 575, 1192, 1432, 1771
BceAI	ACGGC	3 cut(s)	280, 1226, 1455
BciT130I	CCWGG	3 cut(s)	486, 848, 1858
BclI	TGATCA	3 cut(s)	337, 811, 1369
BcnI	CCSGG	1 cut(s)	618
BcoDI	GTCTC	2 cut(s)	235, 564
BcuI	ACTAGT	2 cut(s)	509, 659
BfaI	CTAG	7 cut(s)	492, 498, 510, 630, 660, 1454, 1656
BfmI	CTRYAG	2 cut(s)	314, 439
BfrI	CTTAAG	1 cut(s)	833
BglII	AGATCT	1 cut(s)	1490
BisI	GCNGC	4 cut(s)	279, 429, 1323, 1553
BlnI	CCTAGG	1 cut(s)	491
BlsI	GCNGC	4 cut(s)	280, 430, 1324, 1554
Bme1390I	CCNGG	4 cut(s)	486, 618, 848, 1858
Bme18I	GGWCC	4 cut(s)	363, 488, 729, 1103
BmgT120I	GGNCC	7 cut(s)	218, 363, 488, 503, 729, 1103, 1201
BmrFI	CCNGG	4 cut(s)	486, 618, 848, 1858
BmsI	GCATC	4 cut(s)	462, 910, 1507, 1591
BplI	GAGNNNNNCTC	4 cut(s)	265, 297, 1556, 1588
Bpu10I	CCTNAGC	1 cut(s)	1258
BpuEI	CTTGAG	1 cut(s)	1615
BpuMI	CCSGG	1 cut(s)	618
BsaBI	GATNNNNATC	1 cut(s)	1605
BsaHI	GRCGYC	1 cut(s)	1550
BsaJI	CCNNGG	7 cut(s)	158, 484, 491, 1242, 1298, 1512, 1856
BsaWI	WCCGGW	1 cut(s)	409
Bsc4I	CCNNNNNNNGG	1 cut(s)	1243
Bse118I	RCCGGY	1 cut(s)	409
Bse1I	ACTGG	4 cut(s)	120, 665, 1306, 1556
Bse8I	GATNNNNATC	1 cut(s)	1605
BseBI	CCWGG	3 cut(s)	486, 848, 1858
BseDI	CCNNGG	7 cut(s)	158, 484, 491, 1242, 1298, 1512, 1856
BseGI	GGATG	9 cut(s)	283, 529, 598, 877, 1203, 1268, 1522, 1677, 1759
BseJI	GATNNNNATC	1 cut(s)	1605
BseLI	CCNNNNNNNGG	1 cut(s)	1243
BseMII	CTCAG	1 cut(s)	273
BseNI	ACTGG	4 cut(s)	120, 665, 1306, 1556
BseRI	GAGGAG	5 cut(s)	175, 379, 513, 1743, 1746
BseXI	GCAGC	2 cut(s)	415, 1309
BseYI	CCCAGC	1 cut(s)	647
Bsh1236I	CGCG	1 cut(s)	184
BshFI	GGCC	6 cut(s)	157, 219, 464, 505, 738, 1202
BshNI	GGYRCC	1 cut(s)	986
BshTI	ACCGGT	1 cut(s)	409
BsiHKAI	GWGCWC	1 cut(s)	1742
BsiSI	CCGG	2 cut(s)	410, 617
BslFI	GGGAC	4 cut(s)	295, 742, 1088, 1794
BslI	CCNNNNNNNGG	1 cut(s)	1243
BsmAI	GTCTC	2 cut(s)	235, 564
BsmFI	GGGAC	4 cut(s)	295, 742, 1088, 1794
BsnI	GGCC	6 cut(s)	157, 219, 464, 505, 738, 1202
Bsp1286I	GDGCHC	2 cut(s)	1655, 1742
Bsp1407I	TGTACA	1 cut(s)	1265
Bsp143I	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
BspACI	CCGC	9 cut(s)	85, 184, 267, 278, 366, 423, 608, 1553, 1648
BspANI	GGCC	6 cut(s)	157, 219, 464, 505, 738, 1202
BspCNI	CTCAG	1 cut(s)	272
BspFNI	CGCG	1 cut(s)	184
BspMAI	CTGCAG	1 cut(s)	318
BspPI	GGATC	3 cut(s)	364, 449, 1847
BspQI	GCTCTTC	1 cut(s)	36
BspT107I	GGYRCC	1 cut(s)	986
BspTI	CTTAAG	1 cut(s)	833
BsrBI	CCGCTC	2 cut(s)	278, 610
BsrFI	RCCGGY	1 cut(s)	409
BsrGI	TGTACA	1 cut(s)	1265
BsrI	ACTGG	4 cut(s)	120, 665, 1306, 1556
BssAI	RCCGGY	1 cut(s)	409
BssECI	CCNNGG	7 cut(s)	158, 484, 491, 1242, 1298, 1512, 1856
BssMI	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
BssNI	GRCGYC	1 cut(s)	1550
BssT1I	CCWWGG	3 cut(s)	491, 1298, 1512
Bst2UI	CCWGG	3 cut(s)	486, 848, 1858
Bst4CI	ACNGT	3 cut(s)	761, 1066, 1229
Bst6I	CTCTTC	5 cut(s)	36, 238, 531, 609, 718
BstACI	GRCGYC	1 cut(s)	1550
BstAFI	CTTAAG	1 cut(s)	833
BstAPI	GCANNNNNTGC	1 cut(s)	322
BstAUI	TGTACA	1 cut(s)	1265
BstC8I	GCNNGC	4 cut(s)	6, 202, 217, 466
BstDEI	CTNAG	4 cut(s)	259, 863, 1258, 1826
BstDSI	CCRYGG	1 cut(s)	1242
BstF5I	GGATG	9 cut(s)	283, 529, 598, 877, 1203, 1268, 1522, 1677, 1759
BstFNI	CGCG	1 cut(s)	184
BstHHI	GCGC	1 cut(s)	691
BstKTI	GATC	9 cut(s)	191, 340, 359, 457, 814, 1372, 1493, 1609, 1855
BstMAI	GTCTC	2 cut(s)	235, 564
BstMBI	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
BstMWI	GCNNNNNNNGC	5 cut(s)	181, 322, 393, 868, 1411
BstNI	CCWGG	3 cut(s)	486, 848, 1858
BstNSI	RCATGY	1 cut(s)	179
BstSCI	CCNGG	4 cut(s)	484, 616, 846, 1856
BstSFI	CTRYAG	2 cut(s)	314, 439
BstUI	CGCG	1 cut(s)	184
BstV1I	GCAGC	2 cut(s)	415, 1309
BstX2I	RGATCY	2 cut(s)	356, 1490
BstXI	CCANNNNNNTGG	1 cut(s)	553
BstYI	RGATCY	2 cut(s)	356, 1490
BsuRI	GGCC	6 cut(s)	157, 219, 464, 505, 738, 1202
BtgI	CCRYGG	1 cut(s)	1242
BtsCI	GGATG	9 cut(s)	283, 529, 598, 877, 1203, 1268, 1522, 1677, 1759
BtsIMutI	CAGTG	2 cut(s)	672, 766
Cac8I	GCNNGC	4 cut(s)	6, 202, 217, 466
CaiI	CAGNNNCTG	1 cut(s)	671
CfoI	GCGC	1 cut(s)	691
Cfr10I	RCCGGY	1 cut(s)	409
Cfr13I	GGNCC	7 cut(s)	218, 363, 488, 503, 729, 1103, 1201
CseI	GACGC	3 cut(s)	370, 1421, 1558
Csp6I	GTAC	3 cut(s)	1266, 1309, 1843
CspAI	ACCGGT	1 cut(s)	409
CviAII	CATG	6 cut(s)	176, 469, 547, 740, 1138, 1774
CviQI	GTAC	3 cut(s)	1266, 1309, 1843
DdeI	CTNAG	4 cut(s)	259, 863, 1258, 1826
DpnI	GATC	9 cut(s)	190, 339, 358, 456, 813, 1371, 1492, 1608, 1854
DpnII	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
DraI	TTTAAA	1 cut(s)	1333
EaeI	YGGCCR	1 cut(s)	736
Eam1104I	CTCTTC	5 cut(s)	36, 238, 531, 609, 718
EarI	CTCTTC	5 cut(s)	36, 238, 531, 609, 718
EciI	GGCGGA	2 cut(s)	355, 1663
Ecl136II	GAGCTC	1 cut(s)	1740
Eco130I	CCWWGG	3 cut(s)	491, 1298, 1512
Eco24I	GRGCYC	2 cut(s)	1655, 1742
Eco47I	GGWCC	4 cut(s)	363, 488, 729, 1103
Eco53kI	GAGCTC	1 cut(s)	1740
EcoICRI	GAGCTC	1 cut(s)	1740
EcoO109I	RGGNCCY	3 cut(s)	488, 729, 1103
EcoRII	CCWGG	3 cut(s)	484, 846, 1856
EcoT14I	CCWWGG	3 cut(s)	491, 1298, 1512
EcoT38I	GRGCYC	2 cut(s)	1655, 1742
ErhI	CCWWGG	3 cut(s)	491, 1298, 1512
FaeI	CATG	6 cut(s)	179, 472, 550, 743, 1141, 1777
FalI	AAGNNNNNCTT	6 cut(s)	783, 815, 816, 848, 1505, 1537
FaqI	GGGAC	4 cut(s)	295, 742, 1088, 1794
FatI	CATG	6 cut(s)	175, 468, 546, 739, 1137, 1773
FauNDI	CATATG	1 cut(s)	1528
FbaI	TGATCA	3 cut(s)	337, 811, 1369
Fnu4HI	GCNGC	4 cut(s)	279, 429, 1323, 1553
FokI	GGATG	9 cut(s)	270, 516, 585, 864, 1210, 1275, 1529, 1684, 1746
FriOI	GRGCYC	2 cut(s)	1655, 1742
Fsp4HI	GCNGC	4 cut(s)	279, 429, 1323, 1553
FspBI	CTAG	7 cut(s)	492, 498, 510, 630, 660, 1454, 1656
GlaI	GCGC	1 cut(s)	690
GluI	GCNGC	4 cut(s)	279, 429, 1323, 1553
GsaI	CCCAGC	1 cut(s)	651
HaeIII	GGCC	6 cut(s)	157, 219, 464, 505, 738, 1202
HapII	CCGG	2 cut(s)	410, 617
HgaI	GACGC	3 cut(s)	370, 1421, 1558
HhaI	GCGC	1 cut(s)	691
Hin1I	GRCGYC	1 cut(s)	1550
Hin1II	CATG	6 cut(s)	179, 472, 550, 743, 1141, 1777
Hin6I	GCGC	1 cut(s)	689
HinP1I	GCGC	1 cut(s)	689
HindIII	AAGCTT	1 cut(s)	713
HinfI	GANTC	3 cut(s)	257, 557, 1006
HpaII	CCGG	2 cut(s)	410, 617
HphI	GGTGA	7 cut(s)	183, 281, 464, 926, 1124, 1582, 1893
Hpy166II	GTNNAC	2 cut(s)	1845, 1901
Hpy188I	TCNGA	4 cut(s)	262, 400, 752, 1429
Hpy188III	TCNNGA	6 cut(s)	1274, 1367, 1446, 1454, 1638, 1850
Hpy8I	GTNNAC	2 cut(s)	1845, 1901
Hpy99I	CGWCG	1 cut(s)	1843
HpyAV	CCTTC	5 cut(s)	46, 139, 700, 1307, 1531
HpyCH4III	ACNGT	3 cut(s)	761, 1066, 1229
HpyCH4IV	ACGT	1 cut(s)	1838
HpyCH4V	TGCA	6 cut(s)	316, 782, 923, 1325, 1414, 1604
HpyF10VI	GCNNNNNNNGC	5 cut(s)	181, 322, 393, 868, 1411
HpyF3I	CTNAG	4 cut(s)	259, 863, 1258, 1826
HpySE526I	ACGT	1 cut(s)	1838
Hsp92I	GRCGYC	1 cut(s)	1550
Hsp92II	CATG	6 cut(s)	179, 472, 550, 743, 1141, 1777
HspAI	GCGC	1 cut(s)	689
Ksp22I	TGATCA	3 cut(s)	337, 811, 1369
Kzo9I	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
LguI	GCTCTTC	1 cut(s)	36
LmnI	GCTCC	9 cut(s)	162, 392, 615, 1085, 1254, 1302, 1429, 1474, 1650
Lsp1109I	GCAGC	2 cut(s)	415, 1309
LweI	GCATC	4 cut(s)	462, 910, 1507, 1591
MaeI	CTAG	7 cut(s)	492, 498, 510, 630, 660, 1454, 1656
MaeII	ACGT	1 cut(s)	1838
MaeIII	GTNAC	7 cut(s)	122, 178, 667, 802, 1507, 1743, 1790
MalI	GATC	9 cut(s)	190, 339, 358, 456, 813, 1371, 1492, 1608, 1854
MbiI	CCGCTC	2 cut(s)	278, 610
MboI	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
MflI	RGATCY	2 cut(s)	356, 1490
MhlI	GDGCHC	2 cut(s)	1655, 1742
MlsI	TGGCCA	1 cut(s)	738
MluNI	TGGCCA	1 cut(s)	738
MlyI	GAGTC	2 cut(s)	251, 566
MmeI	TCCRAC	6 cut(s)	539, 587, 650, 730, 1599, 1787
Mox20I	TGGCCA	1 cut(s)	738
MscI	TGGCCA	1 cut(s)	738
MseI	TTAA	8 cut(s)	132, 756, 786, 821, 834, 993, 1332, 1878
MslI	CAYNNNNRTG	3 cut(s)	538, 744, 1097
Msp20I	TGGCCA	1 cut(s)	738
MspCI	CTTAAG	1 cut(s)	833
MspI	CCGG	2 cut(s)	410, 617
MspR9I	CCNGG	4 cut(s)	486, 618, 848, 1858
MvaI	CCWGG	3 cut(s)	486, 848, 1858
MvnI	CGCG	1 cut(s)	184
MwoI	GCNNNNNNNGC	5 cut(s)	181, 322, 393, 868, 1411
NciI	CCSGG	1 cut(s)	618
NdeI	CATATG	1 cut(s)	1528
NdeII	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
NlaIII	CATG	6 cut(s)	179, 472, 550, 743, 1141, 1777
NmeAIII	GCCGAG	2 cut(s)	183, 1872
NmuCI	GTSAC	1 cut(s)	667
NspI	RCATGY	1 cut(s)	179
PciSI	GCTCTTC	1 cut(s)	36
PfeI	GAWTC	1 cut(s)	1006
PinAI	ACCGGT	1 cut(s)	409
PkrI	GCNGC	4 cut(s)	280, 430, 1324, 1554
PleI	GAGTC	2 cut(s)	251, 565
PpsI	GAGTC	2 cut(s)	251, 565
PpuMI	RGGWCCY	3 cut(s)	488, 729, 1103
PsiI	TTATAA	1 cut(s)	966
Psp124BI	GAGCTC	1 cut(s)	1742
Psp5II	RGGWCCY	3 cut(s)	488, 729, 1103
Psp6I	CCWGG	3 cut(s)	484, 846, 1856
PspFI	CCCAGC	1 cut(s)	647
PspGI	CCWGG	3 cut(s)	484, 846, 1856
PspPI	GGNCC	7 cut(s)	218, 363, 488, 503, 729, 1103, 1201
PspPPI	RGGWCCY	3 cut(s)	488, 729, 1103
PstI	CTGCAG	1 cut(s)	318
PstNI	CAGNNNCTG	1 cut(s)	671
PsuI	RGATCY	2 cut(s)	356, 1490
RsaI	GTAC	3 cut(s)	1267, 1310, 1844
RsaNI	GTAC	3 cut(s)	1266, 1309, 1843
RseI	CAYNNNNRTG	3 cut(s)	538, 744, 1097
SacI	GAGCTC	1 cut(s)	1742
SapI	GCTCTTC	1 cut(s)	36
SaqAI	TTAA	8 cut(s)	132, 756, 786, 821, 834, 993, 1332, 1878
SatI	GCNGC	4 cut(s)	279, 429, 1323, 1553
Sau3AI	GATC	9 cut(s)	188, 337, 356, 454, 811, 1369, 1490, 1606, 1852
Sau96I	GGNCC	7 cut(s)	218, 363, 488, 503, 729, 1103, 1201
SbfI	CCTGCAGG	1 cut(s)	318
SchI	GAGTC	2 cut(s)	251, 566
ScrFI	CCNGG	4 cut(s)	486, 618, 848, 1858
SdaI	CCTGCAGG	1 cut(s)	318
SduI	GDGCHC	2 cut(s)	1655, 1742
SfaNI	GCATC	4 cut(s)	462, 910, 1507, 1591
SfcI	CTRYAG	2 cut(s)	314, 439
SinI	GGWCC	4 cut(s)	363, 488, 729, 1103
SmiMI	CAYNNNNRTG	3 cut(s)	538, 744, 1097
SmlI	CTYRAG	2 cut(s)	833, 1594
SmoI	CTYRAG	2 cut(s)	833, 1594
SpeI	ACTAGT	2 cut(s)	509, 659
Sse8387I	CCTGCAGG	1 cut(s)	318
SsiI	CCGC	9 cut(s)	85, 184, 267, 278, 366, 423, 608, 1553, 1648
SspMI	CTAG	7 cut(s)	492, 498, 510, 630, 660, 1454, 1656
SstI	GAGCTC	1 cut(s)	1742
StyD4I	CCNGG	4 cut(s)	484, 616, 846, 1856
StyI	CCWWGG	3 cut(s)	491, 1298, 1512
TaaI	ACNGT	3 cut(s)	761, 1066, 1229
TaiI	ACGT	1 cut(s)	1841
TaqI	TCGA	3 cut(s)	116, 168, 892
TatI	WGTACW	1 cut(s)	1265
TauI	GCSGC	2 cut(s)	281, 1555
TfiI	GAWTC	1 cut(s)	1006
Tru1I	TTAA	8 cut(s)	132, 756, 786, 821, 834, 993, 1332, 1878
Tru9I	TTAA	8 cut(s)	132, 756, 786, 821, 834, 993, 1332, 1878
TscAI	CASTG	2 cut(s)	672, 766
TseFI	GTSAC	1 cut(s)	667
TseI	GCWGC	2 cut(s)	428, 1322
Tsp45I	GTSAC	1 cut(s)	667
TspDTI	ATGAA	4 cut(s)	518, 1058, 1232, 1456
TspGWI	ACGGA	2 cut(s)	1432, 1554
TspRI	CASTG	2 cut(s)	672, 766
Vha464I	CTTAAG	1 cut(s)	833
VpaK11BI	GGWCC	4 cut(s)	363, 488, 729, 1103
XapI	RAATTY	2 cut(s)	209, 856
XbaI	TCTAGA	1 cut(s)	1453
XceI	RCATGY	1 cut(s)	179
XmaJI	CCTAGG	1 cut(s)	491
XspI	CTAG	7 cut(s)	492, 498, 510, 630, 660, 1454, 1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.