Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006820

Physical Location & Seq

Genomic Coordinates Reverse (-)

56211179 .. 56216059

Gene Structure 4881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00122820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGCCTGCTTGGTGGGGAAGGAAGTCAAGCAAGACCAAAACCGACCAGCCGGAGAAGTCACTCAACCCTTATAGCAACCGCTACGCCGTCACCGCGGCCGTCAAGTCGCCGCCGATCAAGACCAAGAGAGGCAAGAGCTTCGATGAGCCCACGCCGCGTGGCTCGCCGAGAGTCAGTAAGGATTTGGGGACGGTTACAAACGGGTCGTCTTCCGGGTTCTCGGGTTTCGATTCCGATGGCGGCGGCTCCAAGGACATCCGCTGCCGCGGCCCTCCTTGTCGTCGCCGCAGGGAGTGGGAAATGATCAGGGGATTGGGTTGGGATCTGCGTCCGGATCGGTTTCCAGTGGGACTTCGTCGGTGTCGTCCTCCGATGAGCAGCCAATTGTGCACGACCCGGGTCAATTTGGGGCTTTCAGGGAAGCTAGATGATGGGAAGAGTGTATGTCATCCACTTCCTCTCCCTCCTGGCTCTCCTACCAGCCCTTCATCCATGCCCAACAATAGAACTAGTGGAGTCACTGAAAGCATAGCTTCTGCCCTATCAAAGTGGAAGAAGGGAAGGCTTCTTGGAAGGGGGACTTTTGGTCATGTTTATGTCGGATTTAACAGTGAAAGTGGGCAAATGTGTGCAATTAAAGAAGTCAGGCTTGTTGAAGATCAATCATTAAAAGAATGTCTTAAGCAACTGAACCAGGAAATAAATTTGCTAAGTCAGCTCTCACATCCAAACATTGTTCGATATCACGGAAGTGAATTGGGTGAAGAGGCACTTTCAGTTTATTTGGAGTATGTCTCTGGTGGCTCAATTCATAAATTGCTTCAAGAATATGGTGCCTTTAAGGAACCTGTCATTCAAAATTACACCAGACAGATATTATCTGGTCTTGCCTACTTACATGGCAGAAATACAGTTCATAGGGACATTAAAGGTGCAAACATATTAGTGGACCCTAATGGTGAAATCAAGTTGGCAGACTTTGGCATGGCTAAACATATTACAAATGTTGCTTCGATGCTGTCATTCAAAGGAAGTCCTTACTGGATGGCCCCTGAGGTACTCTCGTCCACAACATTGGTTCTCCCTAATGCATTGTCACTTCCCACTCCTGCCTTCCTTTCTTTGGTAGTAAAAGTATCCGGTTCAATAGGGTGGGAGTTTCTCATGGTTCATGTGGCTGCAATATTTAAGATTGGAAACAGCAAAGATATGCCAGATATTCCTGATCATCTTTCCCATGATGCAAAGAATTTTGTGAGGCTGTGCTTGCAACGTAACCCATCTGACCGTCCTACTGCTTCTCAACTGCTAGACCACCCTTTCATTAGAGAGCAAATGACAACAAGAAGTTCGAACATCAAGCTAACCAAGGATGCCTTCCCATACGCCTTTGATGGAAGCAGGACTCCGCCAATACTAGAACTGCATTCAAACAGAACGAGCATCACCTTGTGTGATGCAGATCATACAACAAAACCCACAGTAACAAGTTCAAGGGCTATATGGAGCCCCAGAGAGAATGCGAGGATGATTACATCTTTGCCCGTATCTCCTTGTTCAAGCCCTTTACGACAATATGGACCGGCACACAAGAGCTGTTTTCTTTCTCCTCCTCACCCAACTTATGCCATGATGGGACAGAGTAATTACAATTTGAATGAGTATTCATCATATACAACAAGACCAAACACATCATACACTCTCGAACCTTGGCGGGAATCACCTATGCTTAGACCCCAAACACCGAGTGGATCACCAAGAACAAGAACCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04010 ko04540 ko04912 map04010 map04540 map04912

Pfam Domains

Protein Families

Pkinase

Protein Analysis

591

Amino Acids

65.39

Weight (kDa)

9.64

Isoelectric Point (pI)

51.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	185 - 442	7.9e-59	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	187 - 357	4e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570
fragaria_vesca	FvH4_1g24310 FvH4_1g24310
malus_domestica	MD03G1070200.v1.1 MD11G1074000.v1.1
prunus_persica	Prupe.4G270800_v2.0.a1 Prupe.4G270800_v2.0.a1
pyrus_communis	pycom03g05590 pycom11g06140
rosa_chinensis	RchiOBHm_Chr2g0120811
rosa_laevigata	RLG00000018589
rosa_multiflora	Rmu_sc0000621.1_g000004 Rmu_sc0014626.1_g000001
rosa_roxburghii	Rroxscaffold_2G00122820
rosa_rugosa	Rorug02G0231400 Rorug02G0231500
rosa_samantha	Rh2BG299400 Rh2CG277400 Rh2DG313300
rosa_wichuraiana	Rw2G023090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	833
AccII	CGCG	3 cut(s)	95, 157, 267
AccIII	TCCGGA	1 cut(s)	331
AclWI	GGATC	3 cut(s)	330, 342, 1759
AcoI	YGGCCR	1 cut(s)	96
AcsI	RAATTY	2 cut(s)	703, 1249
AdeI	CACNNNGTG	2 cut(s)	1452, 1748
AfaI	GTAC	1 cut(s)	1059
AfiI	CCNNNNNNNGG	1 cut(s)	1123
AflII	CTTAAG	1 cut(s)	680
AgsI	TTSAA	9 cut(s)	656, 824, 857, 1027, 1146, 1431, 1494, 1560, 1657
AhdI	GACNNNNNGTC	1 cut(s)	585
AhlI	ACTAGT	1 cut(s)	509
AjnI	CCWGG	2 cut(s)	466, 693
AjuI	GAANNNNNNNTTGG	2 cut(s)	1361, 1393
AleI	CACNNNNGTG	1 cut(s)	750
AluBI	AGCT	6 cut(s)	138, 424, 533, 718, 1363, 1596
AluI	AGCT	6 cut(s)	138, 424, 533, 718, 1363, 1596
Alw21I	GWGCWC	1 cut(s)	392
Alw26I	GTCTC	1 cut(s)	799
Alw44I	GTGCAC	1 cut(s)	388
AlwI	GGATC	3 cut(s)	330, 342, 1759
Ama87I	CYCGRG	2 cut(s)	220, 396
Aor13HI	TCCGGA	1 cut(s)	331
AoxI	GGCC	3 cut(s)	96, 268, 1047
ApaLI	GTGCAC	1 cut(s)	388
ApeKI	GCWGC	3 cut(s)	261, 378, 1178
ApoI	RAATTY	2 cut(s)	703, 1249
ArsI	GACNNNNNNTTYG	2 cut(s)	191, 223
AspS9I	GGNCC	4 cut(s)	269, 949, 1048, 1580
AsuC2I	CCSGG	3 cut(s)	214, 397, 398
AsuHPI	GGTGA	7 cut(s)	82, 773, 971, 1438, 1607, 1713, 1746
AsuII	TTCGAA	1 cut(s)	1352
AvaI	CYCGRG	2 cut(s)	220, 396
AvaII	GGWCC	2 cut(s)	949, 1580
AxyI	CCTNAGG	1 cut(s)	1053
BaeGI	GKGCMC	1 cut(s)	392
BaeI	ACNNNNGTAYC	2 cut(s)	1049, 1082
BanI	GGYRCC	1 cut(s)	833
BanII	GRGCYC	2 cut(s)	150, 1511
BbsI	GAAGAC	1 cut(s)	201
Bbv12I	GWGCWC	1 cut(s)	392
BbvI	GCAGC	3 cut(s)	248, 390, 1165
BccI	CCATC	6 cut(s)	230, 425, 1039, 1288, 1388, 1627
BceAI	ACGGC	2 cut(s)	71, 83
BcgI	CGANNNNNNTGC	2 cut(s)	121, 155
BciT130I	CCWGG	2 cut(s)	468, 695
BciVI	GTATCC	1 cut(s)	1147
BclI	TGATCA	2 cut(s)	303, 1225
BcnI	CCSGG	3 cut(s)	214, 397, 398
BcoDI	GTCTC	1 cut(s)	799
BcuI	ACTAGT	1 cut(s)	509
BfaI	CTAG	4 cut(s)	425, 510, 1310, 1418
BfrI	CTTAAG	1 cut(s)	680
BfuI	GTATCC	1 cut(s)	1147
Bme1390I	CCNGG	5 cut(s)	214, 397, 398, 468, 695
Bme18I	GGWCC	2 cut(s)	949, 1580
BmeRI	GACNNNNNGTC	1 cut(s)	585
BmeT110I	CYCGRG	2 cut(s)	220, 396
BmgT120I	GGNCC	4 cut(s)	269, 949, 1048, 1580
BmiI	GGNNCC	6 cut(s)	247, 835, 846, 951, 1050, 1508
BmrFI	CCNGG	5 cut(s)	214, 397, 398, 468, 695
BmsI	GCATC	5 cut(s)	1005, 1231, 1363, 1447, 1452
BoxI	GACNNNNGTC	1 cut(s)	398
BpiI	GAAGAC	1 cut(s)	201
BplI	GAGNNNNNCTC	4 cut(s)	779, 811, 1046, 1078
Bpu14I	TTCGAA	1 cut(s)	1352
BpuMI	CCSGG	3 cut(s)	214, 397, 398
BsaBI	GATNNNNATC	1 cut(s)	1461
BsaJI	CCNNGG	6 cut(s)	93, 249, 265, 396, 1368, 1709
BsaWI	WCCGGW	2 cut(s)	331, 1139
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	1 cut(s)	1123
Bse118I	RCCGGY	1 cut(s)	1582
Bse1I	ACTGG	2 cut(s)	344, 1046
Bse21I	CCTNAGG	1 cut(s)	1053
Bse8I	GATNNNNATC	1 cut(s)	1461
BseAI	TCCGGA	1 cut(s)	331
BseBI	CCWGG	2 cut(s)	468, 695
BseDI	CCNNGG	6 cut(s)	93, 249, 265, 396, 1368, 1709
BseGI	GGATG	7 cut(s)	255, 448, 488, 724, 1050, 1378, 1533
BseJI	GATNNNNATC	1 cut(s)	1461
BseLI	CCNNNNNNNGG	1 cut(s)	1123
BseMII	CTCAG	1 cut(s)	1044
BseNI	ACTGG	2 cut(s)	344, 1046
BseRI	GAGGAG	2 cut(s)	1599, 1602
BseSI	GKGCMC	1 cut(s)	392
BseX3I	CGGCCG	1 cut(s)	96
BseXI	GCAGC	3 cut(s)	248, 390, 1165
Bsh1236I	CGCG	3 cut(s)	95, 157, 267
Bsh1285I	CGRYCG	1 cut(s)	99
BshFI	GGCC	3 cut(s)	98, 270, 1049
BshNI	GGYRCC	1 cut(s)	833
BsiEI	CGRYCG	1 cut(s)	99
BsiHKAI	GWGCWC	1 cut(s)	392
BsiHKCI	CYCGRG	2 cut(s)	220, 396
BsiSI	CCGG	6 cut(s)	50, 213, 332, 397, 1140, 1583
BslFI	GGGAC	5 cut(s)	202, 363, 592, 935, 1650
BslI	CCNNNNNNNGG	1 cut(s)	1123
BsmAI	GTCTC	1 cut(s)	799
BsmFI	GGGAC	5 cut(s)	202, 363, 592, 935, 1650
BsmI	GAATGC	2 cut(s)	1426, 1525
BsnI	GGCC	3 cut(s)	98, 270, 1049
BsoBI	CYCGRG	2 cut(s)	220, 396
Bsp119I	TTCGAA	1 cut(s)	1352
Bsp1286I	GDGCHC	3 cut(s)	150, 392, 1511
Bsp13I	TCCGGA	1 cut(s)	331
Bsp143I	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
BspANI	GGCC	3 cut(s)	98, 270, 1049
BspCNI	CTCAG	1 cut(s)	1045
BspEI	TCCGGA	1 cut(s)	331
BspFNI	CGCG	3 cut(s)	95, 157, 267
BspLI	GGNNCC	6 cut(s)	247, 835, 846, 951, 1050, 1508
BspPI	GGATC	3 cut(s)	330, 342, 1759
BspT104I	TTCGAA	1 cut(s)	1352
BspT107I	GGYRCC	1 cut(s)	833
BspTI	CTTAAG	1 cut(s)	680
BsrFI	RCCGGY	1 cut(s)	1582
BsrI	ACTGG	2 cut(s)	344, 1046
BssAI	RCCGGY	1 cut(s)	1582
BssECI	CCNNGG	6 cut(s)	93, 249, 265, 396, 1368, 1709
BssMI	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
BssT1I	CCWWGG	3 cut(s)	249, 1368, 1709
Bst2UI	CCWGG	2 cut(s)	468, 695
Bst4CI	ACNGT	5 cut(s)	193, 611, 913, 1289, 1483
Bst6I	CTCTTC	2 cut(s)	431, 759
BstAFI	CTTAAG	1 cut(s)	680
BstBI	TTCGAA	1 cut(s)	1352
BstC8I	GCNNGC	3 cut(s)	6, 164, 1268
BstDEI	CTNAG	3 cut(s)	710, 1053, 1730
BstDSI	CCRYGG	2 cut(s)	93, 265
BstF5I	GGATG	7 cut(s)	255, 448, 488, 724, 1050, 1378, 1533
BstFNI	CGCG	3 cut(s)	95, 157, 267
BstKTI	GATC	8 cut(s)	117, 306, 325, 337, 661, 1228, 1465, 1754
BstMAI	GTCTC	1 cut(s)	799
BstMBI	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
BstMCI	CGRYCG	1 cut(s)	99
BstMWI	GCNNNNNNNGC	7 cut(s)	92, 154, 163, 267, 387, 715, 1267
BstNI	CCWGG	2 cut(s)	468, 695
BstPAI	GACNNNNGTC	1 cut(s)	398
BstSCI	CCNGG	5 cut(s)	212, 395, 396, 466, 693
BstSLI	GKGCMC	1 cut(s)	392
BstUI	CGCG	3 cut(s)	95, 157, 267
BstV1I	GCAGC	3 cut(s)	248, 390, 1165
BstV2I	GAAGAC	1 cut(s)	201
BstX2I	RGATCY	1 cut(s)	322
BstXI	CCANNNNNNTGG	1 cut(s)	1075
BstYI	RGATCY	1 cut(s)	322
BstZI	CGGCCG	1 cut(s)	96
Bsu36I	CCTNAGG	1 cut(s)	1053
BsuI	GTATCC	1 cut(s)	1147
BsuRI	GGCC	3 cut(s)	98, 270, 1049
BtgI	CCRYGG	2 cut(s)	93, 265
BtsCI	GGATG	7 cut(s)	255, 448, 488, 724, 1050, 1378, 1533
BtsIMutI	CAGTG	3 cut(s)	351, 519, 616
Cac8I	GCNNGC	3 cut(s)	6, 164, 1268
Cfr10I	RCCGGY	1 cut(s)	1582
Cfr13I	GGNCC	4 cut(s)	269, 949, 1048, 1580
Cfr42I	CCGCGG	2 cut(s)	96, 268
Cfr9I	CCCGGG	1 cut(s)	396
CseI	GACGC	1 cut(s)	317
Csp6I	GTAC	1 cut(s)	1058
CviAII	CATG	8 cut(s)	493, 590, 899, 985, 1165, 1172, 1238, 1630
CviQI	GTAC	1 cut(s)	1058
DdeI	CTNAG	3 cut(s)	710, 1053, 1730
DpnI	GATC	8 cut(s)	116, 305, 324, 336, 660, 1227, 1464, 1753
DpnII	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
DraIII	CACNNNGTG	2 cut(s)	1452, 1748
DriI	GACNNNNNGTC	1 cut(s)	585
EaeI	YGGCCR	1 cut(s)	96
EagI	CGGCCG	1 cut(s)	96
Eam1104I	CTCTTC	2 cut(s)	431, 759
Eam1105I	GACNNNNNGTC	1 cut(s)	585
EarI	CTCTTC	2 cut(s)	431, 759
EciI	GGCGGA	1 cut(s)	1398
EclXI	CGGCCG	1 cut(s)	96
Eco130I	CCWWGG	3 cut(s)	249, 1368, 1709
Eco24I	GRGCYC	2 cut(s)	150, 1511
Eco32I	GATATC	1 cut(s)	743
Eco47I	GGWCC	2 cut(s)	949, 1580
Eco52I	CGGCCG	1 cut(s)	96
Eco81I	CCTNAGG	1 cut(s)	1053
Eco88I	CYCGRG	2 cut(s)	220, 396
EcoRII	CCWGG	2 cut(s)	466, 693
EcoRV	GATATC	1 cut(s)	743
EcoT14I	CCWWGG	3 cut(s)	249, 1368, 1709
EcoT22I	ATGCAT	1 cut(s)	1093
EcoT38I	GRGCYC	2 cut(s)	150, 1511
ErhI	CCWWGG	3 cut(s)	249, 1368, 1709
FaeI	CATG	8 cut(s)	496, 593, 902, 988, 1168, 1175, 1241, 1633
FaqI	GGGAC	5 cut(s)	202, 363, 592, 935, 1650
FatI	CATG	8 cut(s)	492, 589, 898, 984, 1164, 1171, 1237, 1629
FauI	CCCGC	1 cut(s)	1707
FbaI	TGATCA	2 cut(s)	303, 1225
FokI	GGATG	7 cut(s)	242, 435, 475, 711, 1057, 1385, 1540
FriOI	GRGCYC	2 cut(s)	150, 1511
FspBI	CTAG	4 cut(s)	425, 510, 1310, 1418
HaeIII	GGCC	3 cut(s)	98, 270, 1049
HapII	CCGG	6 cut(s)	50, 213, 332, 397, 1140, 1583
HgaI	GACGC	1 cut(s)	317
Hin1II	CATG	8 cut(s)	496, 593, 902, 988, 1168, 1175, 1241, 1633
HinfI	GANTC	5 cut(s)	171, 230, 516, 1405, 1718
HpaII	CCGG	6 cut(s)	50, 213, 332, 397, 1140, 1583
HphI	GGTGA	7 cut(s)	82, 773, 971, 1438, 1607, 1713, 1746
Hpy166II	GTNNAC	3 cut(s)	390, 949, 1068
Hpy188I	TCNGA	4 cut(s)	235, 372, 602, 1285
Hpy188III	TCNNGA	5 cut(s)	118, 332, 824, 1223, 1703
Hpy8I	GTNNAC	3 cut(s)	390, 949, 1068
Hpy99I	CGWCG	2 cut(s)	285, 360
HpyAV	CCTTC	7 cut(s)	12, 495, 550, 555, 567, 1123, 1387
HpyCH4III	ACNGT	5 cut(s)	193, 611, 913, 1289, 1483
HpyCH4IV	ACGT	1 cut(s)	1273
HpyCH4V	TGCA	9 cut(s)	390, 632, 935, 1091, 1181, 1244, 1270, 1426, 1460
HpyF10VI	GCNNNNNNNGC	7 cut(s)	92, 154, 163, 267, 387, 715, 1267
HpyF3I	CTNAG	3 cut(s)	710, 1053, 1730
HpySE526I	ACGT	1 cut(s)	1273
Hsp92II	CATG	8 cut(s)	496, 593, 902, 988, 1168, 1175, 1241, 1633
Kpn2I	TCCGGA	1 cut(s)	331
Ksp22I	TGATCA	2 cut(s)	303, 1225
KspI	CCGCGG	2 cut(s)	96, 268
Kzo9I	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
LmnI	GCTCC	2 cut(s)	251, 1506
Lsp1109I	GCAGC	3 cut(s)	248, 390, 1165
LweI	GCATC	5 cut(s)	1005, 1231, 1363, 1447, 1452
MaeI	CTAG	4 cut(s)	425, 510, 1310, 1418
MaeII	ACGT	1 cut(s)	1273
MaeIII	GTNAC	7 cut(s)	57, 88, 193, 517, 1095, 1274, 1483
MalI	GATC	8 cut(s)	116, 305, 324, 336, 660, 1227, 1464, 1753
MboI	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
MboII	GAAGA	5 cut(s)	201, 448, 565, 668, 776
MfeI	CAATTG	1 cut(s)	383
MflI	RGATCY	1 cut(s)	322
MhlI	GDGCHC	3 cut(s)	150, 392, 1511
MlyI	GAGTC	3 cut(s)	180, 525, 1399
MmeI	TCCRAC	1 cut(s)	580
Mph1103I	ATGCAT	1 cut(s)	1093
MroI	TCCGGA	1 cut(s)	331
MseI	TTAA	7 cut(s)	606, 636, 668, 681, 840, 927, 1188
MslI	CAYNNNNRTG	3 cut(s)	594, 750, 944
MspA1I	CMGCKG	3 cut(s)	95, 261, 267
MspCI	CTTAAG	1 cut(s)	680
MspI	CCGG	6 cut(s)	50, 213, 332, 397, 1140, 1583
MspR9I	CCNGG	5 cut(s)	214, 397, 398, 468, 695
MunI	CAATTG	1 cut(s)	383
Mva1269I	GAATGC	2 cut(s)	1426, 1525
MvaI	CCWGG	2 cut(s)	468, 695
MvnI	CGCG	3 cut(s)	95, 157, 267
MwoI	GCNNNNNNNGC	7 cut(s)	92, 154, 163, 267, 387, 715, 1267
NciI	CCSGG	3 cut(s)	214, 397, 398
NdeII	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
NlaIII	CATG	8 cut(s)	496, 593, 902, 988, 1168, 1175, 1241, 1633
NlaIV	GGNNCC	6 cut(s)	247, 835, 846, 951, 1050, 1508
NmeAIII	GCCGAG	1 cut(s)	192
NmuCI	GTSAC	4 cut(s)	57, 88, 517, 1095
NsiI	ATGCAT	1 cut(s)	1093
NspV	TTCGAA	1 cut(s)	1352
OliI	CACNNNNGTG	1 cut(s)	750
PcsI	WCGNNNNNNNCGW	1 cut(s)	361
PctI	GAATGC	2 cut(s)	1426, 1525
PfeI	GAWTC	2 cut(s)	230, 1718
PflFI	GACNNNGTC	1 cut(s)	354
PleI	GAGTC	3 cut(s)	179, 524, 1399
PpsI	GAGTC	3 cut(s)	179, 524, 1399
PshAI	GACNNNNGTC	1 cut(s)	398
Psp6I	CCWGG	2 cut(s)	466, 693
PspGI	CCWGG	2 cut(s)	466, 693
PspN4I	GGNNCC	6 cut(s)	247, 835, 846, 951, 1050, 1508
PspPI	GGNCC	4 cut(s)	269, 949, 1048, 1580
PsuI	RGATCY	1 cut(s)	322
PsyI	GACNNNGTC	1 cut(s)	354
RsaI	GTAC	1 cut(s)	1059
RsaNI	GTAC	1 cut(s)	1058
RseI	CAYNNNNRTG	3 cut(s)	594, 750, 944
SacII	CCGCGG	2 cut(s)	96, 268
SaqAI	TTAA	7 cut(s)	606, 636, 668, 681, 840, 927, 1188
Sau3AI	GATC	8 cut(s)	114, 303, 322, 334, 658, 1225, 1462, 1751
Sau96I	GGNCC	4 cut(s)	269, 949, 1048, 1580
SchI	GAGTC	3 cut(s)	180, 525, 1399
ScrFI	CCNGG	5 cut(s)	214, 397, 398, 468, 695
SduI	GDGCHC	3 cut(s)	150, 392, 1511
SfaNI	GCATC	5 cut(s)	1005, 1231, 1363, 1447, 1452
Sfr303I	CCGCGG	2 cut(s)	96, 268
SfuI	TTCGAA	1 cut(s)	1352
SgrBI	CCGCGG	2 cut(s)	96, 268
SinI	GGWCC	2 cut(s)	949, 1580
SmaI	CCCGGG	1 cut(s)	398
SmiMI	CAYNNNNRTG	3 cut(s)	594, 750, 944
SmlI	CTYRAG	1 cut(s)	680
SmoI	CTYRAG	1 cut(s)	680
SpeI	ACTAGT	1 cut(s)	509
SspI	AATATT	1 cut(s)	1185
SspMI	CTAG	4 cut(s)	425, 510, 1310, 1418
StyD4I	CCNGG	5 cut(s)	212, 395, 396, 466, 693
StyI	CCWWGG	3 cut(s)	249, 1368, 1709
TaaI	ACNGT	5 cut(s)	193, 611, 913, 1289, 1483
TaiI	ACGT	1 cut(s)	1276
TaqI	TCGA	6 cut(s)	141, 228, 739, 1013, 1352, 1704
TauI	GCSGC	8 cut(s)	98, 112, 157, 243, 246, 267, 270, 288
TfiI	GAWTC	2 cut(s)	230, 1718
Tru1I	TTAA	7 cut(s)	606, 636, 668, 681, 840, 927, 1188
Tru9I	TTAA	7 cut(s)	606, 636, 668, 681, 840, 927, 1188
TscAI	CASTG	3 cut(s)	351, 526, 616
TseFI	GTSAC	4 cut(s)	57, 88, 517, 1095
TseI	GCWGC	3 cut(s)	261, 378, 1178
Tsp45I	GTSAC	4 cut(s)	57, 88, 517, 1095
TspDTI	ATGAA	6 cut(s)	477, 800, 905, 1160, 1312, 1656
TspGWI	ACGGA	1 cut(s)	762
TspMI	CCCGGG	1 cut(s)	396
TspRI	CASTG	3 cut(s)	351, 526, 616
Tth111I	GACNNNGTC	1 cut(s)	354
Vha464I	CTTAAG	1 cut(s)	680
VneI	GTGCAC	1 cut(s)	388
VpaK11BI	GGWCC	2 cut(s)	949, 1580
XapI	RAATTY	2 cut(s)	703, 1249
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1745
XmaI	CCCGGG	1 cut(s)	396
XspI	CTAG	4 cut(s)	425, 510, 1310, 1418
Zsp2I	ATGCAT	1 cut(s)	1093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.