Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006820

Physical Location & Seq

Genomic Coordinates Forward (+)

32264513 .. 32268944

Gene Structure 4432 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018589

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGCCTGCTTGGTGGGGAAGGAAGTCAAGCAAGACCAAAACCGACGCGCCGGAGAAGTCACTCAACCCTTACAGCAACCGCTACGCCGTCACCGCGTCCGTCAAGTCGCCGCCCATCAATACCAAGAGAGGCAGGAGCTTCGATGAGCCCACGCCGCGTGGCTCGCCGAGGGTCAGTAAGGATTTGGGGACGGTTGTAAACGGGTCGTCGTCCGGGTTCTCGGGTTTCGATTCCGATGGCGGCGGCTCCAAGGGACATCCGCTGCCCCGGCCGTCGGTGTCGTCGCCGCAGGGAGTGGGAAATGATCAGGGGATTGGGTTGGGATCTGCGTCCGGATCGGTTTCCAGTGGGACTTCGTCGGTGTCGTCCTCCGATGAGCAGCCAATTGCGCACGACCCGGCTCAATTTGGGGCTTTCAGAGTTAATGGTGAACCCAAGTTCAACATGATGCCGAGGAGTCCAGGTCCGGGGTCTAGGGGGCCGACTAGCCCAACATCTCCTCTTCATGCACGGTTGGGGGGCATGAGTTTGGAGTCTCCAACAGGGAAGCTAGATGATGGGAAGAGTGTATGTCATCCACTTCCTCTTCCTCCAGGTTCTCCTACCAGCCCTTCTTCCTTGCCCAACAATAGAACTAGTGGAGTCACTGAAAGCATAGCTTCTGCCCTATCAAAGTGGAAGAAGGGAAGGCTTCTTGGAAGGGGGACTTTTGGTCATGTTTATGTCGGATTTAACAGTGAAAGTGGGCAAATGTGTGCAATTAAAGAAGTCAAGCTTGTTGAAGATCAATCATTAAAAGAATGTCTTAAGCAACTTAACCAGGAAATAAATTTGCTAAGTCAGCTCTCACATCCAAACATTGTTCGATATCACGGAAGTGAATTGGGTGAAGAGGCACTCTCAGTTTATTTGGAGTATGTCTCTGGTGGCTCAATTCATAAATTGCTTCAAGAATATGGTGCCTTTAAGGAACCTGTCATTCAAAATTACACCAGACAGATATTATCTGGTCTTGCCTACTTACATGGCAGAAATACAGTTCATAGGGACATTAAAGGTGCAAACATATTAGTGGACCCTAATGGTGAAATCAAGTTGGCAGACTTTGGCATGGCTAAACATATTACAAATGTTGCTTCGATGCTGTCATTCAAAGGAAGTCCTTACTGGATGGCCCCTGAGGTTGTCATGAATACAAATGGCTATAGTCTTGCAGTGGATATATGGAGCTTGGGATGTACTATTCTTGAAATGGCGACTTCAAAACCTCCATGGAGCCAGTATGAAGGGGTGGCTGCAATATTTAAGATTGGAAACAGCAAAGATATGCCAGATATTCCTGATTATCTTTCCCATGATGCAAAGAATTTTGTGAGGCTGTGCTTGCAACGTAACCCATCGGACCGTCCTACTGCTTCTCAACTGCTAGACCACCCTTTCATTAGAGAGCAAATGACAACAAGAAGTTCGAACATCAAGCTAACCAAGGATGCCTTCCCTTACGCCTTTGATGGAAGCAGGACTCCGCCAATACTAGAACTGCATTCAAACAGAACGAGCATCACCTTGTGTGATGCAGATCATACAACAAAACCCGCAGTAACAAGTTCAAGGGCTATATGGAGCCCCAGAGAGAGTGCGAGGATGATTACATCTTTGCCCGTATCTCCTTGTTCAAGCCCTTTACGACAATATGGACCGGCACACAAGAGCTGTTTTCTTTCTCCTCCTCACCCAACTTATGCCATGATGGGCCAGAGTAATTACAATTTGAATGAGTATTCATCATATACAACAAGACCAAACACATCATACACTCTCGAACCTTGGCGGGAATCACCTATGCTTAGACCCCAAACACCGAATGGATCACCAAGAACAAGACCCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04010 ko04540 ko04912 map04010 map04540 map04912

Pfam Domains

Protein Families

Pkinase

Protein Analysis

631

Amino Acids

68.3

Weight (kDa)

9.25

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	227 - 481	2.9e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	229 - 476	1.1e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570 AT1G53570
fragaria_vesca	FvH4_1g24310 FvH4_1g24310
malus_domestica	MD03G1070200.v1.1 MD11G1074000.v1.1
prunus_persica	Prupe.4G270800_v2.0.a1 Prupe.4G270800_v2.0.a1
pyrus_communis	pycom03g05590 pycom11g06140
rosa_chinensis	RchiOBHm_Chr2g0120811
rosa_laevigata	RLG00000018589
rosa_multiflora	Rmu_sc0000621.1_g000004 Rmu_sc0014626.1_g000001
rosa_roxburghii	Rroxscaffold_2G00122820
rosa_rugosa	Rorug02G0231400 Rorug02G0231500
rosa_samantha	Rh2BG299400 Rh2CG277400 Rh2DG313300
rosa_wichuraiana	Rw2G023090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	959
AccII	CGCG	3 cut(s)	47, 95, 157
AccIII	TCCGGA	1 cut(s)	332
AclWI	GGATC	3 cut(s)	331, 343, 1876
AcoI	YGGCCR	1 cut(s)	269
AcsI	RAATTY	2 cut(s)	829, 1366
AdeI	CACNNNGTG	1 cut(s)	1569
AfaI	GTAC	1 cut(s)	1240
AfiI	CCNNNNNNNGG	2 cut(s)	274, 467
AflII	CTTAAG	1 cut(s)	806
AhdI	GACNNNNNGTC	1 cut(s)	711
AhlI	ACTAGT	1 cut(s)	635
AjnI	CCWGG	3 cut(s)	460, 592, 819
AjuI	GAANNNNNNNTTGG	2 cut(s)	1478, 1510
AleI	CACNNNNGTG	1 cut(s)	876
AluBI	AGCT	8 cut(s)	138, 550, 659, 775, 844, 1230, 1480, 1713
AluI	AGCT	8 cut(s)	138, 550, 659, 775, 844, 1230, 1480, 1713
Alw26I	GTCTC	2 cut(s)	540, 925
AlwI	GGATC	3 cut(s)	331, 343, 1876
Ama87I	CYCGRG	1 cut(s)	220
Aor13HI	TCCGGA	1 cut(s)	332
AoxI	GGCC	4 cut(s)	269, 479, 1173, 1753
ApeKI	GCWGC	3 cut(s)	262, 379, 1295
ApoI	RAATTY	2 cut(s)	829, 1366
AspLEI	GCGC	2 cut(s)	49, 391
AspS9I	GGNCC	7 cut(s)	464, 479, 1075, 1174, 1402, 1697, 1753
AsuC2I	CCSGG	4 cut(s)	214, 268, 398, 468
AsuHPI	GGTGA	8 cut(s)	82, 440, 899, 1097, 1555, 1724, 1830, 1863
AsuII	TTCGAA	1 cut(s)	1469
AvaI	CYCGRG	1 cut(s)	220
AvaII	GGWCC	4 cut(s)	464, 1075, 1402, 1697
AxyI	CCTNAGG	1 cut(s)	1179
BanI	GGYRCC	1 cut(s)	959
BanII	GRGCYC	2 cut(s)	150, 1628
BbvI	GCAGC	3 cut(s)	249, 391, 1282
BccI	CCATC	7 cut(s)	122, 230, 551, 1165, 1405, 1505, 1744
BceAI	ACGGC	2 cut(s)	71, 256
BcgI	CGANNNNNNTGC	2 cut(s)	121, 155
BciT130I	CCWGG	3 cut(s)	462, 594, 821
BclI	TGATCA	1 cut(s)	304
BcnI	CCSGG	4 cut(s)	214, 268, 398, 468
BcoDI	GTCTC	2 cut(s)	540, 925
BcuI	ACTAGT	1 cut(s)	635
BfaI	CTAG	6 cut(s)	474, 486, 551, 636, 1427, 1535
BfmI	CTRYAG	1 cut(s)	1204
BfrI	CTTAAG	1 cut(s)	806
BisI	GCNGC	8 cut(s)	110, 155, 241, 244, 263, 287, 380, 1296
BlsI	GCNGC	8 cut(s)	111, 156, 242, 245, 264, 288, 381, 1297
Bme1390I	CCNGG	7 cut(s)	214, 268, 398, 462, 468, 594, 821
Bme18I	GGWCC	4 cut(s)	464, 1075, 1402, 1697
BmeRI	GACNNNNNGTC	1 cut(s)	711
BmeT110I	CYCGRG	1 cut(s)	220
BmgT120I	GGNCC	7 cut(s)	464, 479, 1075, 1174, 1402, 1697, 1753
BmiI	GGNNCC	8 cut(s)	247, 480, 961, 972, 1077, 1176, 1277, 1625
BmrFI	CCNGG	7 cut(s)	214, 268, 398, 462, 468, 594, 821
BmsI	GCATC	6 cut(s)	438, 1131, 1348, 1480, 1564, 1569
BplI	GAGNNNNNCTC	4 cut(s)	884, 916, 905, 937
BpmI	CTGGAG	1 cut(s)	576
Bpu14I	TTCGAA	1 cut(s)	1469
BpuMI	CCSGG	4 cut(s)	214, 268, 398, 468
BsaBI	GATNNNNATC	1 cut(s)	1578
BsaJI	CCNNGG	8 cut(s)	167, 249, 266, 452, 467, 1271, 1485, 1826
BsaWI	WCCGGW	1 cut(s)	332
BsaXI	ACNNNNNCTCC	2 cut(s)	448, 478
Bsc4I	CCNNNNNNNGG	2 cut(s)	274, 467
Bse118I	RCCGGY	1 cut(s)	1699
Bse1I	ACTGG	3 cut(s)	345, 1172, 1279
Bse21I	CCTNAGG	1 cut(s)	1179
Bse8I	GATNNNNATC	1 cut(s)	1578
BseAI	TCCGGA	1 cut(s)	332
BseBI	CCWGG	3 cut(s)	462, 594, 821
BseDI	CCNNGG	8 cut(s)	167, 249, 266, 452, 467, 1271, 1485, 1826
BseGI	GGATG	7 cut(s)	256, 574, 850, 1176, 1241, 1495, 1650
BseJI	GATNNNNATC	1 cut(s)	1578
BseLI	CCNNNNNNNGG	2 cut(s)	274, 467
BseMII	CTCAG	2 cut(s)	915, 1170
BseNI	ACTGG	3 cut(s)	345, 1172, 1279
BseRI	GAGGAG	4 cut(s)	469, 489, 1716, 1719
BseX3I	CGGCCG	1 cut(s)	269
BseXI	GCAGC	3 cut(s)	249, 391, 1282
Bsh1236I	CGCG	3 cut(s)	47, 95, 157
Bsh1285I	CGRYCG	1 cut(s)	272
BshFI	GGCC	4 cut(s)	271, 481, 1175, 1755
BshNI	GGYRCC	1 cut(s)	959
BsiEI	CGRYCG	1 cut(s)	272
BsiHKCI	CYCGRG	1 cut(s)	220
BsiSI	CCGG	7 cut(s)	50, 213, 268, 333, 398, 467, 1700
BslFI	GGGAC	5 cut(s)	202, 267, 364, 718, 1061
BslI	CCNNNNNNNGG	2 cut(s)	274, 467
BsmAI	GTCTC	2 cut(s)	540, 925
BsmFI	GGGAC	5 cut(s)	202, 267, 364, 718, 1061
BsmI	GAATGC	1 cut(s)	1543
BsnI	GGCC	4 cut(s)	271, 481, 1175, 1755
BsoBI	CYCGRG	1 cut(s)	220
Bsp119I	TTCGAA	1 cut(s)	1469
Bsp1286I	GDGCHC	2 cut(s)	150, 1628
Bsp13I	TCCGGA	1 cut(s)	332
Bsp143I	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
Bsp19I	CCATGG	1 cut(s)	1271
BspANI	GGCC	4 cut(s)	271, 481, 1175, 1755
BspCNI	CTCAG	2 cut(s)	914, 1171
BspEI	TCCGGA	1 cut(s)	332
BspFNI	CGCG	3 cut(s)	47, 95, 157
BspHI	TCATGA	1 cut(s)	1188
BspLI	GGNNCC	8 cut(s)	247, 480, 961, 972, 1077, 1176, 1277, 1625
BspPI	GGATC	3 cut(s)	331, 343, 1876
BspT104I	TTCGAA	1 cut(s)	1469
BspT107I	GGYRCC	1 cut(s)	959
BspTI	CTTAAG	1 cut(s)	806
BsrFI	RCCGGY	1 cut(s)	1699
BsrI	ACTGG	3 cut(s)	345, 1172, 1279
BssAI	RCCGGY	1 cut(s)	1699
BssECI	CCNNGG	8 cut(s)	167, 249, 266, 452, 467, 1271, 1485, 1826
BssMI	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
BssT1I	CCWWGG	4 cut(s)	249, 1271, 1485, 1826
Bst2UI	CCWGG	3 cut(s)	462, 594, 821
Bst4CI	ACNGT	5 cut(s)	193, 513, 737, 1039, 1406
Bst6I	CTCTTC	4 cut(s)	507, 557, 591, 885
BstAFI	CTTAAG	1 cut(s)	806
BstBI	TTCGAA	1 cut(s)	1469
BstC8I	GCNNGC	3 cut(s)	6, 164, 1385
BstDEI	CTNAG	4 cut(s)	836, 901, 1179, 1847
BstDSI	CCRYGG	1 cut(s)	1271
BstF5I	GGATG	7 cut(s)	256, 574, 850, 1176, 1241, 1495, 1650
BstFNI	CGCG	3 cut(s)	47, 95, 157
BstHHI	GCGC	2 cut(s)	49, 391
BstKTI	GATC	6 cut(s)	307, 326, 338, 787, 1582, 1871
BstMAI	GTCTC	2 cut(s)	540, 925
BstMBI	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
BstMCI	CGRYCG	1 cut(s)	272
BstMWI	GCNNNNNNNGC	7 cut(s)	92, 154, 163, 268, 388, 841, 1384
BstNI	CCWGG	3 cut(s)	462, 594, 821
BstSCI	CCNGG	7 cut(s)	212, 266, 396, 460, 466, 592, 819
BstSFI	CTRYAG	1 cut(s)	1204
BstUI	CGCG	3 cut(s)	47, 95, 157
BstV1I	GCAGC	3 cut(s)	249, 391, 1282
BstX2I	RGATCY	1 cut(s)	323
BstYI	RGATCY	1 cut(s)	323
BstZI	CGGCCG	1 cut(s)	269
Bsu36I	CCTNAGG	1 cut(s)	1179
BsuRI	GGCC	4 cut(s)	271, 481, 1175, 1755
BtgI	CCRYGG	1 cut(s)	1271
BtsCI	GGATG	7 cut(s)	256, 574, 850, 1176, 1241, 1495, 1650
BtsI	GCAGTG	1 cut(s)	1221
BtsIMutI	CAGTG	4 cut(s)	352, 645, 742, 1221
Cac8I	GCNNGC	3 cut(s)	6, 164, 1385
CciI	TCATGA	1 cut(s)	1188
CfoI	GCGC	2 cut(s)	49, 391
Cfr10I	RCCGGY	1 cut(s)	1699
Cfr13I	GGNCC	7 cut(s)	464, 479, 1075, 1174, 1402, 1697, 1753
CpoI	CGGWCCG	1 cut(s)	1402
CseI	GACGC	3 cut(s)	53, 84, 318
Csp6I	GTAC	1 cut(s)	1239
CspI	CGGWCCG	1 cut(s)	1402
CviQI	GTAC	1 cut(s)	1239
DdeI	CTNAG	4 cut(s)	836, 901, 1179, 1847
DpnI	GATC	6 cut(s)	306, 325, 337, 786, 1581, 1870
DpnII	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
DraIII	CACNNNGTG	1 cut(s)	1569
DriI	GACNNNNNGTC	1 cut(s)	711
EaeI	YGGCCR	1 cut(s)	269
EagI	CGGCCG	1 cut(s)	269
Eam1104I	CTCTTC	4 cut(s)	507, 557, 591, 885
Eam1105I	GACNNNNNGTC	1 cut(s)	711
EarI	CTCTTC	4 cut(s)	507, 557, 591, 885
EciI	GGCGGA	1 cut(s)	1515
EclXI	CGGCCG	1 cut(s)	269
Eco130I	CCWWGG	4 cut(s)	249, 1271, 1485, 1826
Eco24I	GRGCYC	2 cut(s)	150, 1628
Eco32I	GATATC	1 cut(s)	869
Eco47I	GGWCC	4 cut(s)	464, 1075, 1402, 1697
Eco52I	CGGCCG	1 cut(s)	269
Eco81I	CCTNAGG	1 cut(s)	1179
Eco88I	CYCGRG	1 cut(s)	220
EcoRII	CCWGG	3 cut(s)	460, 592, 819
EcoRV	GATATC	1 cut(s)	869
EcoT14I	CCWWGG	4 cut(s)	249, 1271, 1485, 1826
EcoT38I	GRGCYC	2 cut(s)	150, 1628
ErhI	CCWWGG	4 cut(s)	249, 1271, 1485, 1826
FaqI	GGGAC	5 cut(s)	202, 267, 364, 718, 1061
FauI	CCCGC	2 cut(s)	1603, 1824
FbaI	TGATCA	1 cut(s)	304
Fnu4HI	GCNGC	8 cut(s)	110, 155, 241, 244, 263, 287, 380, 1296
FokI	GGATG	7 cut(s)	243, 561, 837, 1183, 1248, 1502, 1657
FriOI	GRGCYC	2 cut(s)	150, 1628
Fsp4HI	GCNGC	8 cut(s)	110, 155, 241, 244, 263, 287, 380, 1296
FspBI	CTAG	6 cut(s)	474, 486, 551, 636, 1427, 1535
FspI	TGCGCA	1 cut(s)	390
GlaI	GCGC	2 cut(s)	48, 390
GluI	GCNGC	8 cut(s)	110, 155, 241, 244, 263, 287, 380, 1296
GsuI	CTGGAG	1 cut(s)	576
HaeIII	GGCC	4 cut(s)	271, 481, 1175, 1755
HapII	CCGG	7 cut(s)	50, 213, 268, 333, 398, 467, 1700
HgaI	GACGC	3 cut(s)	53, 84, 318
HhaI	GCGC	2 cut(s)	49, 391
Hin6I	GCGC	2 cut(s)	47, 389
HinP1I	GCGC	2 cut(s)	47, 389
HindIII	AAGCTT	1 cut(s)	773
HinfI	GANTC	6 cut(s)	230, 457, 533, 642, 1522, 1835
HpaII	CCGG	7 cut(s)	50, 213, 268, 333, 398, 467, 1700
HphI	GGTGA	8 cut(s)	82, 440, 899, 1097, 1555, 1724, 1830, 1863
Hpy166II	GTNNAC	3 cut(s)	199, 431, 1075
Hpy188I	TCNGA	5 cut(s)	235, 373, 419, 728, 1402
Hpy188III	TCNNGA	6 cut(s)	333, 950, 1189, 1247, 1340, 1820
Hpy8I	GTNNAC	3 cut(s)	199, 431, 1075
Hpy99I	CGWCG	5 cut(s)	47, 211, 277, 286, 361
HpyAV	CCTTC	7 cut(s)	12, 621, 676, 681, 693, 1280, 1504
HpyCH4III	ACNGT	5 cut(s)	193, 513, 737, 1039, 1406
HpyCH4IV	ACGT	1 cut(s)	1390
HpyCH4V	TGCA	9 cut(s)	509, 758, 1061, 1214, 1298, 1361, 1387, 1543, 1577
HpyF10VI	GCNNNNNNNGC	7 cut(s)	92, 154, 163, 268, 388, 841, 1384
HpyF3I	CTNAG	4 cut(s)	836, 901, 1179, 1847
HpySE526I	ACGT	1 cut(s)	1390
HspAI	GCGC	2 cut(s)	47, 389
Kpn2I	TCCGGA	1 cut(s)	332
Ksp22I	TGATCA	1 cut(s)	304
Kzo9I	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
LmnI	GCTCC	5 cut(s)	135, 251, 1227, 1275, 1623
Lsp1109I	GCAGC	3 cut(s)	249, 391, 1282
LweI	GCATC	6 cut(s)	438, 1131, 1348, 1480, 1564, 1569
MaeI	CTAG	6 cut(s)	474, 486, 551, 636, 1427, 1535
MaeII	ACGT	1 cut(s)	1390
MaeIII	GTNAC	5 cut(s)	57, 88, 643, 1391, 1600
MalI	GATC	6 cut(s)	306, 325, 337, 786, 1581, 1870
MboI	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
MboII	GAAGA	7 cut(s)	494, 574, 578, 606, 691, 794, 902
MfeI	CAATTG	1 cut(s)	384
MflI	RGATCY	1 cut(s)	323
MhlI	GDGCHC	2 cut(s)	150, 1628
MlyI	GAGTC	4 cut(s)	466, 542, 651, 1516
MmeI	TCCRAC	2 cut(s)	563, 706
MroI	TCCGGA	1 cut(s)	332
MseI	TTAA	9 cut(s)	423, 732, 762, 794, 807, 816, 966, 1053, 1305
MslI	CAYNNNNRTG	3 cut(s)	720, 876, 1070
MspA1I	CMGCKG	1 cut(s)	262
MspCI	CTTAAG	1 cut(s)	806
MspI	CCGG	7 cut(s)	50, 213, 268, 333, 398, 467, 1700
MspR9I	CCNGG	7 cut(s)	214, 268, 398, 462, 468, 594, 821
MunI	CAATTG	1 cut(s)	384
Mva1269I	GAATGC	1 cut(s)	1543
MvaI	CCWGG	3 cut(s)	462, 594, 821
MvnI	CGCG	3 cut(s)	47, 95, 157
MwoI	GCNNNNNNNGC	7 cut(s)	92, 154, 163, 268, 388, 841, 1384
NciI	CCSGG	4 cut(s)	214, 268, 398, 468
NcoI	CCATGG	1 cut(s)	1271
NdeII	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
NlaIV	GGNNCC	8 cut(s)	247, 480, 961, 972, 1077, 1176, 1277, 1625
NmeAIII	GCCGAG	2 cut(s)	192, 477
NmuCI	GTSAC	3 cut(s)	57, 88, 643
NsbI	TGCGCA	1 cut(s)	390
NspV	TTCGAA	1 cut(s)	1469
OliI	CACNNNNGTG	1 cut(s)	876
PagI	TCATGA	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	1 cut(s)	362
PctI	GAATGC	1 cut(s)	1543
PfeI	GAWTC	2 cut(s)	230, 1835
PflFI	GACNNNGTC	1 cut(s)	355
PkrI	GCNGC	8 cut(s)	111, 156, 242, 245, 264, 288, 381, 1297
PleI	GAGTC	4 cut(s)	465, 541, 650, 1516
PpsI	GAGTC	4 cut(s)	465, 541, 650, 1516
Psp6I	CCWGG	3 cut(s)	460, 592, 819
PspGI	CCWGG	3 cut(s)	460, 592, 819
PspN4I	GGNNCC	8 cut(s)	247, 480, 961, 972, 1077, 1176, 1277, 1625
PspPI	GGNCC	7 cut(s)	464, 479, 1075, 1174, 1402, 1697, 1753
PsuI	RGATCY	1 cut(s)	323
PsyI	GACNNNGTC	1 cut(s)	355
RsaI	GTAC	1 cut(s)	1240
RsaNI	GTAC	1 cut(s)	1239
RseI	CAYNNNNRTG	3 cut(s)	720, 876, 1070
Rsr2I	CGGWCCG	1 cut(s)	1402
RsrII	CGGWCCG	1 cut(s)	1402
SaqAI	TTAA	9 cut(s)	423, 732, 762, 794, 807, 816, 966, 1053, 1305
SatI	GCNGC	8 cut(s)	110, 155, 241, 244, 263, 287, 380, 1296
Sau3AI	GATC	6 cut(s)	304, 323, 335, 784, 1579, 1868
Sau96I	GGNCC	7 cut(s)	464, 479, 1075, 1174, 1402, 1697, 1753
SchI	GAGTC	4 cut(s)	466, 542, 651, 1516
ScrFI	CCNGG	7 cut(s)	214, 268, 398, 462, 468, 594, 821
SduI	GDGCHC	2 cut(s)	150, 1628
SfaNI	GCATC	6 cut(s)	438, 1131, 1348, 1480, 1564, 1569
SfcI	CTRYAG	1 cut(s)	1204
SfuI	TTCGAA	1 cut(s)	1469
SinI	GGWCC	4 cut(s)	464, 1075, 1402, 1697
SmiMI	CAYNNNNRTG	3 cut(s)	720, 876, 1070
SmlI	CTYRAG	1 cut(s)	806
SmoI	CTYRAG	1 cut(s)	806
SpeI	ACTAGT	1 cut(s)	635
SspI	AATATT	1 cut(s)	1302
SspMI	CTAG	6 cut(s)	474, 486, 551, 636, 1427, 1535
StyD4I	CCNGG	7 cut(s)	212, 266, 396, 460, 466, 592, 819
StyI	CCWWGG	4 cut(s)	249, 1271, 1485, 1826
TaaI	ACNGT	5 cut(s)	193, 513, 737, 1039, 1406
TaiI	ACGT	1 cut(s)	1393
TaqI	TCGA	6 cut(s)	141, 228, 865, 1139, 1469, 1821
TatI	WGTACW	1 cut(s)	1238
TauI	GCSGC	5 cut(s)	112, 157, 243, 246, 289
TfiI	GAWTC	2 cut(s)	230, 1835
Tru1I	TTAA	9 cut(s)	423, 732, 762, 794, 807, 816, 966, 1053, 1305
Tru9I	TTAA	9 cut(s)	423, 732, 762, 794, 807, 816, 966, 1053, 1305
TscAI	CASTG	4 cut(s)	352, 652, 742, 1221
TseFI	GTSAC	3 cut(s)	57, 88, 643
TseI	GCWGC	3 cut(s)	262, 379, 1295
Tsp45I	GTSAC	3 cut(s)	57, 88, 643
TspDTI	ATGAA	7 cut(s)	494, 926, 1031, 1205, 1299, 1429, 1773
TspGWI	ACGGA	2 cut(s)	88, 888
TspRI	CASTG	4 cut(s)	352, 652, 742, 1221
Tth111I	GACNNNGTC	1 cut(s)	355
Vha464I	CTTAAG	1 cut(s)	806
VpaK11BI	GGWCC	4 cut(s)	464, 1075, 1402, 1697
XapI	RAATTY	2 cut(s)	829, 1366
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1862
XspI	CTAG	6 cut(s)	474, 486, 551, 636, 1427, 1535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.