Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0010087

Physical Location & Seq

Genomic Coordinates Reverse (-)

10574319 .. 10578770

Gene Structure 4452 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1117500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGCGAGTCGACTCGTTCTCGCGTTCGCACTCAGCGCTCTCCTCTTCTTCTCCCACTCAGTTTTCTGCAAGGAATCGCACCCCATCGACGACGACGATGAGGATCTCAGCTTCCTCGAGGAGCCCACCGACCACGGCGACGACGCGCCGCACTATCCAGATCCGGATCACTACGACGAGGACAATTACGACGATCTCGAGAACTACTCCGATTTTGACGAGGGCGGCGATCATGAGGACTCGTACAAGGAGCCGGACGTGGACGAGAAGGACGTCGCCGTTTTGAAGGCGGCGAATTTCAGCGATGTGGTGGAGAAGAACAGGTTCGTCATGGTCGAGTTCTACGCGCCGTGGTGCGGACACTGCCAGGCCTTGAAACCGGAGTACGCGGCGGCAGCTACCGAGCTCAAGGGGGAAGATGTAATTTTGGCCAAGGTCGACGCGACGGAGGAGAACGAGCTGTCGCAGGAGTACGGCATCGAGGGTTTCCCGACTATCTTCTTCTTCATTGATGGCGTTCACAAGCCTTACGCAGGCCAAAGGACCAAGGAGGGGATTGTAACCTGGATTAAGAAGAAGATTGGACCTGGCATCCAAAACTTGACCACATTGGAGGATGCGGAACGCATATTGACTGCTGAAAGCAAAGTCGTTTTGGGCTACCTCAACTCTTTGGTGGGTCCTGAGAGTGACGAGCTTGCCGCTGCTTCAAGACTTGAAGATGAGGTGTCCTTTTACCAAACTGTAGATCCTAAGGTGGCAAAACTTTTCCATCTTGATGCTGAAGTTAAGCGCCCTGTTTTGGTCCTGCTAAAGAAGGAGGCTGAGAAACTAAGCTATTTCGATGGTAAATTTGATAAGACTGCAATTGCGGAGTTTGTCTTTGCGAACAAGCTACCTCTGGTTATCACCTTTACCAGGGATAATGCCCCACAAATTTTTGAAAGTACCATCAAGAAACAGCTGTTGCTCTTTGCCTCTTCAAAAGATTCAGAGAAGGTTCTCCCTGATTTTCAAAAGGCTGCACAACTTTTCAAAGGAAAGCTTATCTTTGTATATGTGGAAACGGATAATGAAGATATCGGAAAGCCAGTTTCGGATTATTTCGGTGTCACTAGTGAAGCTCCAACAGTTCTTGGGTACACTGGAAATGACGATGGTAGGAAATTTTTTCTTGACGGAGAGGTGACCATATCTAATTTAAAGGCTTTTGGGAAGGACTTTATTGAGGACAAGCTTAAACCTTTCTATAAGTCGGACCCAATTCCTGAAAGTAACGACGGGGATGTGAAAATAGTTGTTGGGAATAACTTTGATGAAATTGTCTTGGACGAGTCAAAGGATGTTCTTCTCGAGATATATGCACCCTGGTGCGGGCATTGCCAATCTCTGGAGCCAACCTACAACAAGCTTGCCAAACATCTACGAGGCATTGACTCTATTGTTATAGCCAAGATGGACGGAACCACAAATGAGCATCCCAGGGCAAAGGCTGATGGGTTCCCTACACTTCTATTCTTTCCAGCGGGAAATAAGAGCTTTGATCCAATTTCCGTAGACAGCGACCGCACAGTGGTGGCATTCTACAAATTCCTCAAGAAAAACGCATCAATCCCTTTCAAGCTCCAAAAGCCAGCCTCAACACCAAAATCCGAGGGTTCTGCCGCTACAGAGAGCAAAGGGAGCGGCGGCGCCGAAGACTCGAAGGATGAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0006457 GO:0006950 GO:0006979 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016853 GO:0016860 GO:0016864 GO:0031090 GO:0033554 GO:0034976 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051716 GO:0098588 GO:0098805 GO:0140096

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Thioredoxin Thioredoxin_6

Protein Analysis

573

Amino Acids

63.65

Weight (kDa)

4.63

Isoelectric Point (pI)

31.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin	PF00085	92 - 192	2.3e-29	Thioredoxin
Thioredoxin_7	PF13899	105 - 169	3e-06	Thioredoxin-like
Thioredoxin_2	PF13098	105 - 175	3.2e-07	Thioredoxin-like domain
Thioredoxin_6	PF13848	233 - 406	1.3e-25	Thioredoxin-like domain
Thioredoxin	PF00085	430 - 515	1.7e-20	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54960 AT3G54960 AT5G60640 AT5G60640 AT5G60640
fragaria_vesca	FvH4_3g32410
malus_domestica	MD03G1117500.v1.1 MD11G1135800.v1.1 MD13G1134800.v1.1
prunus_persica	Prupe.6G101200_v2.0.a1
pyrus_communis	pycom11g11260
rosa_chinensis	RchiOBHm_Chr5g0059381
rosa_laevigata	RLG00000035286
rosa_multiflora	Rmu_sc0000375.1_g000007
rosa_roxburghii	Rroxscaffold_1G00021150
rosa_rugosa	Rorug05G0322600
rosa_samantha	Rh5AG387100 Rh5BG398400 Rh5CG422400 Rh5DG414200
rosa_wichuraiana	Rw5G036420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	276
AbsI	CCTCGAGG	1 cut(s)	116
AccB1I	GGYRCC	1 cut(s)	1691
AccB7I	CCANNNNNTGG	1 cut(s)	1390
AccBSI	CCGCTC	1 cut(s)	1686
AccI	GTMKAC	3 cut(s)	10, 438, 1557
AccII	CGCG	5 cut(s)	23, 146, 347, 389, 443
AccIII	TCCGGA	1 cut(s)	163
AclWI	GGATC	5 cut(s)	111, 155, 174, 743, 1538
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	5 cut(s)	295, 851, 936, 1166, 1589
AcuI	CTGAAG	1 cut(s)	804
AcyI	GRCGYC	2 cut(s)	273, 1692
AfaI	GTAC	5 cut(s)	245, 386, 473, 949, 1142
AfeI	AGCGCT	1 cut(s)	37
AfiI	CCNNNNNNNGG	9 cut(s)	356, 533, 552, 802, 918, 1373, 1374, 1390, 1573
AgsI	TTSAA	9 cut(s)	286, 376, 711, 719, 944, 984, 1016, 1036, 1621
AhlI	ACTAGT	1 cut(s)	1115
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	6 cut(s)	366, 563, 586, 917, 1367, 1481
AleI	CACNNNNGTG	2 cut(s)	1369, 1574
Alw21I	GWGCWC	1 cut(s)	408
AlwI	GGATC	5 cut(s)	111, 155, 174, 743, 1538
Ama87I	CYCGRG	3 cut(s)	116, 197, 1352
Aor13HI	TCCGGA	1 cut(s)	163
Aor51HI	AGCGCT	1 cut(s)	37
AoxI	GGCC	3 cut(s)	369, 429, 535
ApeKI	GCWGC	3 cut(s)	395, 704, 1022
ApoI	RAATTY	5 cut(s)	295, 851, 936, 1166, 1589
Asp700I	GAANNNNTTC	1 cut(s)	323
AspLEI	GCGC	5 cut(s)	38, 148, 349, 795, 1694
AspS9I	GGNCC	5 cut(s)	543, 584, 680, 805, 1258
AsuHPI	GGTGA	2 cut(s)	901, 1198
AvaI	CYCGRG	3 cut(s)	116, 197, 1352
AvaII	GGWCC	5 cut(s)	543, 584, 680, 805, 1258
AxyI	CCTNAGG	1 cut(s)	753
BalI	TGGCCA	1 cut(s)	431
BanI	GGYRCC	1 cut(s)	1691
BanII	GRGCYC	2 cut(s)	126, 408
BbsI	GAAGAC	1 cut(s)	1704
Bbv12I	GWGCWC	1 cut(s)	408
BbvI	GCAGC	3 cut(s)	407, 691, 1009
BccI	CCATC	8 cut(s)	92, 506, 780, 839, 959, 1151, 1450, 1490
BceAI	ACGGC	4 cut(s)	151, 263, 334, 490
BcgI	CGANNNNNNTGC	4 cut(s)	1343, 1377, 1643, 1677
BciT130I	CCWGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
BcuI	ACTAGT	1 cut(s)	1115
BfaI	CTAG	1 cut(s)	1116
BfmI	CTRYAG	2 cut(s)	744, 1668
BfoI	RGCGCY	3 cut(s)	39, 796, 1695
Bme1390I	CCNGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
Bme18I	GGWCC	5 cut(s)	543, 584, 680, 805, 1258
BmeT110I	CYCGRG	3 cut(s)	116, 197, 1352
BmgBI	CACGTC	1 cut(s)	259
BmgT120I	GGNCC	5 cut(s)	543, 584, 680, 805, 1258
BmiI	GGNNCC	8 cut(s)	123, 252, 681, 1260, 1395, 1465, 1502, 1693
BmrFI	CCNGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
BmsI	GCATC	6 cut(s)	486, 600, 607, 769, 1486, 1616
BpiI	GAAGAC	1 cut(s)	1704
BplI	GAGNNNNNCTC	2 cut(s)	191, 223
BpmI	CTGGAG	1 cut(s)	1412
BpuEI	CTTGAG	2 cut(s)	392, 1580
BsaBI	GATNNNNATC	2 cut(s)	102, 165
BsaHI	GRCGYC	2 cut(s)	273, 1692
BsaJI	CCNNGG	9 cut(s)	133, 350, 432, 546, 918, 1367, 1481, 1482, 1653
BsaWI	WCCGGW	2 cut(s)	163, 379
Bsc4I	CCNNNNNNNGG	9 cut(s)	356, 533, 552, 802, 918, 1373, 1374, 1390, 1573
Bse1I	ACTGG	2 cut(s)	1091, 1150
Bse21I	CCTNAGG	1 cut(s)	753
Bse3DI	GCAATG	1 cut(s)	1378
Bse8I	GATNNNNATC	2 cut(s)	102, 165
BseAI	TCCGGA	1 cut(s)	163
BseBI	CCWGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
BseDI	CCNNGG	9 cut(s)	133, 350, 432, 546, 918, 1367, 1481, 1482, 1653
BseGI	GGATG	6 cut(s)	591, 622, 1291, 1348, 1477, 1714
BseJI	GATNNNNATC	2 cut(s)	102, 165
BseLI	CCNNNNNNNGG	9 cut(s)	356, 533, 552, 802, 918, 1373, 1374, 1390, 1573
BseMI	GCAATG	1 cut(s)	1378
BseMII	CTCAG	5 cut(s)	46, 72, 121, 675, 816
BseNI	ACTGG	2 cut(s)	1091, 1150
BseRI	GAGGAG	3 cut(s)	32, 134, 464
BseXI	GCAGC	3 cut(s)	407, 691, 1009
BsgI	GTGCAG	1 cut(s)	1008
Bsh1236I	CGCG	5 cut(s)	23, 146, 347, 389, 443
Bsh1285I	CGRYCG	1 cut(s)	1567
BshFI	GGCC	3 cut(s)	371, 431, 537
BshNI	GGYRCC	1 cut(s)	1691
BsiEI	CGRYCG	1 cut(s)	1567
BsiHKAI	GWGCWC	1 cut(s)	408
BsiHKCI	CYCGRG	3 cut(s)	116, 197, 1352
BsiSI	CCGG	3 cut(s)	164, 254, 380
BslI	CCNNNNNNNGG	9 cut(s)	356, 533, 552, 802, 918, 1373, 1374, 1390, 1573
BsmI	GAATGC	1 cut(s)	1580
BsnI	GGCC	3 cut(s)	371, 431, 537
BsoBI	CYCGRG	3 cut(s)	116, 197, 1352
Bsp1286I	GDGCHC	2 cut(s)	126, 408
Bsp13I	TCCGGA	1 cut(s)	163
Bsp143I	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
BspANI	GGCC	3 cut(s)	371, 431, 537
BspCNI	CTCAG	5 cut(s)	45, 71, 120, 676, 817
BspEI	TCCGGA	1 cut(s)	163
BspFNI	CGCG	5 cut(s)	23, 146, 347, 389, 443
BspHI	TCATGA	1 cut(s)	232
BspLI	GGNNCC	8 cut(s)	123, 252, 681, 1260, 1395, 1465, 1502, 1693
BspPI	GGATC	5 cut(s)	111, 155, 174, 743, 1538
BspT107I	GGYRCC	1 cut(s)	1691
BsrBI	CCGCTC	1 cut(s)	1686
BsrDI	GCAATG	1 cut(s)	1378
BsrI	ACTGG	2 cut(s)	1091, 1150
BssECI	CCNNGG	9 cut(s)	133, 350, 432, 546, 918, 1367, 1481, 1482, 1653
BssMI	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
BssNI	GRCGYC	2 cut(s)	273, 1692
BssT1I	CCWWGG	2 cut(s)	432, 546
Bst2UI	CCWGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
Bst4CI	ACNGT	3 cut(s)	745, 1132, 1573
Bst6I	CTCTTC	2 cut(s)	50, 985
BstACI	GRCGYC	2 cut(s)	273, 1692
BstC8I	GCNNGC	5 cut(s)	535, 699, 1376, 1413, 1635
BstDEI	CTNAG	7 cut(s)	32, 58, 107, 684, 753, 825, 833
BstDSI	CCRYGG	2 cut(s)	133, 350
BstEII	GGTNACC	1 cut(s)	1186
BstENI	CCTNNNNNAGG	2 cut(s)	531, 916
BstF5I	GGATG	6 cut(s)	591, 622, 1291, 1348, 1477, 1714
BstFNI	CGCG	5 cut(s)	23, 146, 347, 389, 443
BstH2I	RGCGCY	3 cut(s)	39, 796, 1695
BstHHI	GCGC	5 cut(s)	38, 148, 349, 795, 1694
BstKTI	GATC	7 cut(s)	106, 163, 169, 196, 232, 751, 1546
BstMBI	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
BstMCI	CGRYCG	1 cut(s)	1567
BstMWI	GCNNNNNNNGC	6 cut(s)	35, 363, 395, 1380, 1630, 1683
BstNI	CCWGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
BstPI	GGTNACC	1 cut(s)	1186
BstSCI	CCNGG	6 cut(s)	366, 563, 586, 917, 1367, 1481
BstSFI	CTRYAG	2 cut(s)	744, 1668
BstUI	CGCG	5 cut(s)	23, 146, 347, 389, 443
BstV1I	GCAGC	3 cut(s)	407, 691, 1009
BstV2I	GAAGAC	1 cut(s)	1704
BstX2I	RGATCY	3 cut(s)	103, 160, 748
BstYI	RGATCY	3 cut(s)	103, 160, 748
Bsu36I	CCTNAGG	1 cut(s)	753
BsuRI	GGCC	3 cut(s)	371, 431, 537
BtgI	CCRYGG	2 cut(s)	133, 350
BtgZI	GCGATG	1 cut(s)	318
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	6 cut(s)	591, 622, 1291, 1348, 1477, 1714
BtsI	GCAGTG	1 cut(s)	361
BtsIMutI	CAGTG	3 cut(s)	361, 1143, 1578
Cac8I	GCNNGC	5 cut(s)	535, 699, 1376, 1413, 1635
CciI	TCATGA	1 cut(s)	232
CfoI	GCGC	5 cut(s)	38, 148, 349, 795, 1694
Cfr13I	GGNCC	5 cut(s)	543, 584, 680, 805, 1258
CseI	GACGC	2 cut(s)	152, 449
Csp6I	GTAC	5 cut(s)	244, 385, 472, 948, 1141
CviAII	CATG	2 cut(s)	233, 331
CviQI	GTAC	5 cut(s)	244, 385, 472, 948, 1141
DdeI	CTNAG	7 cut(s)	32, 58, 107, 684, 753, 825, 833
DinI	GGCGCC	1 cut(s)	1693
DpnI	GATC	7 cut(s)	105, 162, 168, 195, 231, 750, 1545
DpnII	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
DraI	TTTAAA	1 cut(s)	1203
EaeI	YGGCCR	1 cut(s)	429
Eam1104I	CTCTTC	2 cut(s)	50, 985
EarI	CTCTTC	2 cut(s)	50, 985
Ecl136II	GAGCTC	1 cut(s)	406
Eco130I	CCWWGG	2 cut(s)	432, 546
Eco147I	AGGCCT	1 cut(s)	371
Eco24I	GRGCYC	2 cut(s)	126, 408
Eco32I	GATATC	1 cut(s)	1081
Eco47I	GGWCC	5 cut(s)	543, 584, 680, 805, 1258
Eco47III	AGCGCT	1 cut(s)	37
Eco53kI	GAGCTC	1 cut(s)	406
Eco57I	CTGAAG	1 cut(s)	804
Eco81I	CCTNAGG	1 cut(s)	753
Eco88I	CYCGRG	3 cut(s)	116, 197, 1352
Eco91I	GGTNACC	1 cut(s)	1186
EcoICRI	GAGCTC	1 cut(s)	406
EcoNI	CCTNNNNNAGG	2 cut(s)	531, 916
EcoO109I	RGGNCCY	1 cut(s)	680
EcoO65I	GGTNACC	1 cut(s)	1186
EcoRII	CCWGG	6 cut(s)	366, 563, 586, 917, 1367, 1481
EcoRV	GATATC	1 cut(s)	1081
EcoT14I	CCWWGG	2 cut(s)	432, 546
EcoT38I	GRGCYC	2 cut(s)	126, 408
EgeI	GGCGCC	1 cut(s)	1693
EheI	GGCGCC	1 cut(s)	1693
ErhI	CCWWGG	2 cut(s)	432, 546
FaeI	CATG	2 cut(s)	236, 334
FalI	AAGNNNNNCTT	4 cut(s)	1029, 1061, 1034, 1066
FatI	CATG	2 cut(s)	232, 330
FauI	CCCGC	2 cut(s)	1367, 1519
FblI	GTMKAC	3 cut(s)	10, 438, 1557
FokI	GGATG	5 cut(s)	578, 629, 1298, 1355, 1464
FriOI	GRGCYC	2 cut(s)	126, 408
FspBI	CTAG	1 cut(s)	1116
GlaI	GCGC	5 cut(s)	37, 147, 348, 794, 1693
GsuI	CTGGAG	1 cut(s)	1412
HaeII	RGCGCY	3 cut(s)	39, 796, 1695
HaeIII	GGCC	3 cut(s)	371, 431, 537
HapII	CCGG	3 cut(s)	164, 254, 380
HgaI	GACGC	2 cut(s)	152, 449
HhaI	GCGC	5 cut(s)	38, 148, 349, 795, 1694
Hin1I	GRCGYC	2 cut(s)	273, 1692
Hin1II	CATG	2 cut(s)	236, 334
Hin6I	GCGC	5 cut(s)	36, 146, 347, 793, 1692
HinP1I	GCGC	5 cut(s)	36, 146, 347, 793, 1692
HincII	GTYRAC	2 cut(s)	11, 439
HindII	GTYRAC	2 cut(s)	11, 439
HindIII	AAGCTT	3 cut(s)	1043, 1235, 1409
HinfI	GANTC	8 cut(s)	7, 12, 74, 239, 989, 1334, 1436, 1700
HpaII	CCGG	3 cut(s)	164, 254, 380
HphI	GGTGA	2 cut(s)	901, 1198
Hpy166II	GTNNAC	6 cut(s)	11, 262, 439, 520, 1143, 1558
Hpy188I	TCNGA	6 cut(s)	211, 994, 1085, 1099, 1258, 1654
Hpy8I	GTNNAC	6 cut(s)	11, 262, 439, 520, 1143, 1558
HpyAV	CCTTC	6 cut(s)	262, 280, 811, 991, 1210, 1699
HpyCH4III	ACNGT	3 cut(s)	745, 1132, 1573
HpyCH4IV	ACGT	2 cut(s)	258, 273
HpyCH4V	TGCA	4 cut(s)	69, 866, 1025, 1364
HpyF10VI	GCNNNNNNNGC	6 cut(s)	35, 363, 395, 1380, 1630, 1683
HpyF3I	CTNAG	7 cut(s)	32, 58, 107, 684, 753, 825, 833
HpySE526I	ACGT	2 cut(s)	258, 273
Hsp92I	GRCGYC	2 cut(s)	273, 1692
Hsp92II	CATG	2 cut(s)	236, 334
HspAI	GCGC	5 cut(s)	36, 146, 347, 793, 1692
KasI	GGCGCC	1 cut(s)	1691
Kpn2I	TCCGGA	1 cut(s)	163
Kzo9I	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
LmnI	GCTCC	6 cut(s)	121, 250, 1129, 1393, 1629, 1683
Lsp1109I	GCAGC	3 cut(s)	407, 691, 1009
LweI	GCATC	6 cut(s)	486, 600, 607, 769, 1486, 1616
MaeI	CTAG	1 cut(s)	1116
MaeII	ACGT	2 cut(s)	258, 273
MaeIII	GTNAC	5 cut(s)	559, 689, 1111, 1186, 1274
MalI	GATC	7 cut(s)	105, 162, 168, 195, 231, 750, 1545
MbiI	CCGCTC	1 cut(s)	1686
MboI	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
MfeI	CAATTG	1 cut(s)	867
MflI	RGATCY	3 cut(s)	103, 160, 748
MhlI	GDGCHC	2 cut(s)	126, 408
MlsI	TGGCCA	1 cut(s)	431
MluNI	TGGCCA	1 cut(s)	431
Mly113I	GGCGCC	1 cut(s)	1692
MlyI	GAGTC	6 cut(s)	6, 16, 233, 1343, 1430, 1694
MmeI	TCCRAC	2 cut(s)	1151, 1236
Mox20I	TGGCCA	1 cut(s)	431
MroI	TCCGGA	1 cut(s)	163
MroXI	GAANNNNTTC	1 cut(s)	323
MscI	TGGCCA	1 cut(s)	431
MseI	TTAA	4 cut(s)	570, 789, 1202, 1239
MslI	CAYNNNNRTG	3 cut(s)	777, 1369, 1574
Msp20I	TGGCCA	1 cut(s)	431
MspA1I	CMGCKG	3 cut(s)	704, 964, 1526
MspI	CCGG	3 cut(s)	164, 254, 380
MspR9I	CCNGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
MunI	CAATTG	1 cut(s)	867
Mva1269I	GAATGC	1 cut(s)	1580
MvaI	CCWGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
MvnI	CGCG	5 cut(s)	23, 146, 347, 389, 443
MwoI	GCNNNNNNNGC	6 cut(s)	35, 363, 395, 1380, 1630, 1683
NarI	GGCGCC	1 cut(s)	1692
NdeII	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
NlaIII	CATG	2 cut(s)	236, 334
NlaIV	GGNNCC	8 cut(s)	123, 252, 681, 1260, 1395, 1465, 1502, 1693
NmuCI	GTSAC	3 cut(s)	689, 1111, 1186
OliI	CACNNNNGTG	2 cut(s)	1369, 1574
PaeR7I	CTCGAG	3 cut(s)	116, 197, 1352
PagI	TCATGA	1 cut(s)	232
PasI	CCCWGGG	1 cut(s)	1482
PceI	AGGCCT	1 cut(s)	371
PcsI	WCGNNNNNNNCGW	5 cut(s)	93, 195, 225, 270, 333
PctI	GAATGC	1 cut(s)	1580
PdmI	GAANNNNTTC	1 cut(s)	323
PfeI	GAWTC	2 cut(s)	74, 989
PflMI	CCANNNNNTGG	1 cut(s)	1390
PleI	GAGTC	6 cut(s)	6, 15, 233, 1342, 1430, 1694
PluTI	GGCGCC	1 cut(s)	1695
PpsI	GAGTC	6 cut(s)	6, 15, 233, 1342, 1430, 1694
PpuMI	RGGWCCY	1 cut(s)	680
Psp124BI	GAGCTC	1 cut(s)	408
Psp5II	RGGWCCY	1 cut(s)	680
Psp6I	CCWGG	6 cut(s)	366, 563, 586, 917, 1367, 1481
PspEI	GGTNACC	1 cut(s)	1186
PspGI	CCWGG	6 cut(s)	366, 563, 586, 917, 1367, 1481
PspN4I	GGNNCC	8 cut(s)	123, 252, 681, 1260, 1395, 1465, 1502, 1693
PspPI	GGNCC	5 cut(s)	543, 584, 680, 805, 1258
PspPPI	RGGWCCY	1 cut(s)	680
PspXI	VCTCGAGB	1 cut(s)	116
PsuI	RGATCY	3 cut(s)	103, 160, 748
PvuII	CAGCTG	1 cut(s)	964
RsaI	GTAC	5 cut(s)	245, 386, 473, 949, 1142
RsaNI	GTAC	5 cut(s)	244, 385, 472, 948, 1141
RseI	CAYNNNNRTG	3 cut(s)	777, 1369, 1574
SacI	GAGCTC	1 cut(s)	408
SalI	GTCGAC	2 cut(s)	9, 437
SaqAI	TTAA	4 cut(s)	570, 789, 1202, 1239
Sau3AI	GATC	7 cut(s)	103, 160, 166, 193, 229, 748, 1543
Sau96I	GGNCC	5 cut(s)	543, 584, 680, 805, 1258
SchI	GAGTC	6 cut(s)	6, 16, 233, 1343, 1430, 1694
ScrFI	CCNGG	6 cut(s)	368, 565, 588, 919, 1369, 1483
SduI	GDGCHC	2 cut(s)	126, 408
SfaNI	GCATC	6 cut(s)	486, 600, 607, 769, 1486, 1616
SfcI	CTRYAG	2 cut(s)	744, 1668
SfoI	GGCGCC	1 cut(s)	1693
Sfr274I	CTCGAG	3 cut(s)	116, 197, 1352
SinI	GGWCC	5 cut(s)	543, 584, 680, 805, 1258
SlaI	CTCGAG	3 cut(s)	116, 197, 1352
SmiMI	CAYNNNNRTG	3 cut(s)	777, 1369, 1574
SmlI	CTYRAG	5 cut(s)	116, 197, 407, 1352, 1595
SmoI	CTYRAG	5 cut(s)	116, 197, 407, 1352, 1595
SpeI	ACTAGT	1 cut(s)	1115
SseBI	AGGCCT	1 cut(s)	371
SspDI	GGCGCC	1 cut(s)	1691
SspMI	CTAG	1 cut(s)	1116
SstI	GAGCTC	1 cut(s)	408
StuI	AGGCCT	1 cut(s)	371
StyD4I	CCNGG	6 cut(s)	366, 563, 586, 917, 1367, 1481
StyI	CCWWGG	2 cut(s)	432, 546
TaaI	ACNGT	3 cut(s)	745, 1132, 1573
TaiI	ACGT	2 cut(s)	261, 276
TauI	GCSGC	9 cut(s)	151, 228, 293, 392, 395, 704, 1667, 1689, 1692
TfiI	GAWTC	2 cut(s)	74, 989
Tru1I	TTAA	4 cut(s)	570, 789, 1202, 1239
Tru9I	TTAA	4 cut(s)	570, 789, 1202, 1239
TscAI	CASTG	3 cut(s)	368, 1150, 1578
TseFI	GTSAC	3 cut(s)	689, 1111, 1186
TseI	GCWGC	3 cut(s)	395, 704, 1022
Tsp45I	GTSAC	3 cut(s)	689, 1111, 1186
TspDTI	ATGAA	3 cut(s)	496, 1089, 1332
TspGWI	ACGGA	5 cut(s)	461, 1082, 1194, 1476, 1543
TspRI	CASTG	3 cut(s)	368, 1150, 1578
Van91I	CCANNNNNTGG	1 cut(s)	1390
VpaK11BI	GGWCC	5 cut(s)	543, 584, 680, 805, 1258
XagI	CCTNNNNNAGG	2 cut(s)	531, 916
XapI	RAATTY	5 cut(s)	295, 851, 936, 1166, 1589
XhoI	CTCGAG	3 cut(s)	116, 197, 1352
XmiI	GTMKAC	3 cut(s)	10, 438, 1557
XmnI	GAANNNNTTC	1 cut(s)	323
XspI	CTAG	1 cut(s)	1116
ZraI	GACGTC	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.