Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010087

Physical Location & Seq

Genomic Coordinates Forward (+)

58353306 .. 58359021

Gene Structure 5716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG422400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCGAGTCGACTCGTTCTCGTGTTCACACTCAGCGCCCTGCTCCTCCTCTCCTCCCGCCCAGCTCTCTGCAAGGACGCCGCCGTCGACGACGACGACGAGGATCTCAGCTTCCTCGAAGAGCCGACCGAGCAGCAGGGCCACGGCCAAGACGCCGCGCCGCACTATCCAGATCCGGACGAATTCGACGCCGATAACTACGACGACGCCGACGACTTCTCCGATTTCGACGAGGGCGATCAGGAGGCGTACAAGGAGCCCGAGGTCGACGAGAAGGACGTCGTCGTTTTGAAGGGGGCGAACTTCAGCGAGACGATTAAGAAGAACAGGTTCGTCCTGGTTGAGTTCTACGCGCCGTGGTGCGGACACTGCCAGGCCTTGGCTCCGGAGTACGCGGCGGCCGCGACGGAGCTCAAGGGCGGAGATGTAGTTTTGGCCAAAATTGATGCGACGGAGGAGAACGAGTTGTCTCAGGAGTATGATGTGCAGGGTTTCCCGACTATCTTCTTCTTCAGCGACGGTGTTCACAAGCCTTATACAGGGCAAAGGACCAAAGAGGCTATTGTTACCTGGATCAAGAAGAAGACGGGACCTGGTATCTCTAACGTGACCACAGTGGAGGATGCAGAGCGCATTTTGACTTCTGAAACTAAATTCGTTGTGGGATTCCTCAACTCTTTGGTGGGTCCTGAGAGTGATGAGCTTGCTGCTGCTTCAAGACTTGAGGATGATGTCAACTTCTACCAAACAGTGGATCCAAAGGTGGCAAAACTTTTCCATATTGACTCTGAGGCCAAACGCCCAGCGGTGGTCCTGATAAAGAAAGAGGATGAGAAGCTGAGCTATTTCGCCGGTAAATTCGACAAGTCTGCAATTGCGGAGTTTGTCTTTGCAAACAAGCTTCCTTTGGTTGTCACATTTACTAGGGAGAATGCCCCTTCCATTTTTGAAAGTGAAATAAAGAAACAGCTGTTGCTCTTTGCCACTTCAACCGACTCAAAGAAGGTTCTCCCAGAGTTTGTAGAGGCAGCAAAGTTATTCAAAGGAAAGCTTATCTTTGTATTTGTGGAAACGGATAACGAAGATGTCGGAAAGCCAGTTTCAGATTATTTTGGTATCACTGGTGATGCTCCAACGGTTCTCGCATACACCGGAAATGATGATGCTAGGAAGTTTATTCTTGATAAAGAAGCAACCTTGGCTAACATAAAGGCTTTTGGGGAGGACTTCCTTGAGGATAAACTTAAAGCTTTCTATAAGTCAGACCCGATCCCGGAGACTAATGATGGAGATGTGAAAATAGTGGTTGGAAATAACTTTGATGATATTGTCTTGGATGAGTCGAAGGATGTTCTTCTCGAGATTTATGCACCCTGGTGCGGGCATTGCCAATCTCTGGAACCAACCTACAACAAGCTTGCCAAACATCTACGAGGCATTGAGTCTATTGTTATAGCCAAGATGGACGGAACCACAAATGAGCATCCCAGGGCAAAGGTACATTCAAAATATACTGTGGTTAAAGAATTATTTGTCTTCTTTTATTTATTATTTATTTATTTATTATTATTATTTTCTTTTTCCTTTTTCCATATTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0006457 GO:0006950 GO:0006979 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016853 GO:0016860 GO:0016864 GO:0031090 GO:0033554 GO:0034976 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051716 GO:0098588 GO:0098805 GO:0140096

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Thioredoxin Thioredoxin_6

Protein Analysis

533

Amino Acids

59.61

Weight (kDa)

4.59

Isoelectric Point (pI)

32.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin	PF00085	94 - 194	1.1e-31	Thioredoxin
Thioredoxin_7	PF13899	107 - 171	2e-06	Thioredoxin-like
Thioredoxin_2	PF13098	107 - 188	2.4e-06	Thioredoxin-like domain
Thioredoxin_6	PF13848	235 - 406	2.1e-24	Thioredoxin-like domain
Thioredoxin	PF00085	432 - 495	2.2e-16	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54960 AT3G54960 AT5G60640 AT5G60640 AT5G60640
fragaria_vesca	FvH4_3g32410
malus_domestica	MD03G1117500.v1.1 MD11G1135800.v1.1 MD13G1134800.v1.1
prunus_persica	Prupe.6G101200_v2.0.a1
pyrus_communis	pycom11g11260
rosa_chinensis	RchiOBHm_Chr5g0059381
rosa_laevigata	RLG00000035286
rosa_multiflora	Rmu_sc0000375.1_g000007
rosa_roxburghii	Rroxscaffold_1G00021150
rosa_rugosa	Rorug05G0322600
rosa_samantha	Rh5AG387100 Rh5BG398400 Rh5CG422400 Rh5DG414200
rosa_wichuraiana	Rw5G036420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	83
AatII	GACGTC	1 cut(s)	282
AccB7I	CCANNNNNTGG	3 cut(s)	379, 751, 1396
AccI	GTMKAC	3 cut(s)	10, 87, 267
AccII	CGCG	4 cut(s)	158, 353, 395, 404
AccIII	TCCGGA	2 cut(s)	175, 385
AclWI	GGATC	6 cut(s)	111, 167, 581, 749, 762, 1264
AcoI	YGGCCR	3 cut(s)	145, 399, 435
AcsI	RAATTY	3 cut(s)	182, 653, 857
AcuI	CTGAAG	2 cut(s)	289, 496
AcyI	GRCGYC	5 cut(s)	78, 153, 189, 207, 279
AfaI	GTAC	3 cut(s)	251, 392, 1500
AfiI	CCNNNNNNNGG	9 cut(s)	362, 379, 539, 751, 808, 1273, 1379, 1380, 1396
AgsI	TTSAA	6 cut(s)	292, 717, 950, 990, 1042, 1506
AjnI	CCWGG	6 cut(s)	336, 372, 569, 592, 1373, 1487
AleI	CACNNNNGTG	1 cut(s)	1375
Alw21I	GWGCWC	1 cut(s)	414
Alw26I	GTCTC	3 cut(s)	305, 474, 1271
AlwI	GGATC	6 cut(s)	111, 167, 581, 749, 762, 1264
Ama87I	CYCGRG	2 cut(s)	260, 1358
Aor13HI	TCCGGA	2 cut(s)	175, 385
AoxI	GGCC	6 cut(s)	139, 145, 375, 399, 435, 792
ApeKI	GCWGC	4 cut(s)	133, 707, 710, 1028
ApoI	RAATTY	3 cut(s)	182, 653, 857
Asp700I	GAANNNNTTC	1 cut(s)	329
AspLEI	GCGC	4 cut(s)	38, 160, 355, 633
AspS9I	GGNCC	5 cut(s)	139, 549, 590, 686, 811
AsuC2I	CCSGG	1 cut(s)	1274
AsuHPI	GGTGA	1 cut(s)	1136
AvaI	CYCGRG	2 cut(s)	260, 1358
AvaII	GGWCC	4 cut(s)	549, 590, 686, 811
BalI	TGGCCA	1 cut(s)	437
BamHI	GGATCC	1 cut(s)	754
BanII	GRGCYC	2 cut(s)	261, 414
BauI	CACGAG	1 cut(s)	20
BbsI	GAAGAC	2 cut(s)	590, 1528
Bbv12I	GWGCWC	1 cut(s)	414
BbvI	GCAGC	4 cut(s)	145, 694, 697, 1040
BccI	CCATC	2 cut(s)	1280, 1456
BceAI	ACGGC	3 cut(s)	68, 160, 340
BcgI	CGANNNNNNTGC	4 cut(s)	851, 885, 1349, 1383
BciT130I	CCWGG	6 cut(s)	338, 374, 571, 594, 1375, 1489
BcnI	CCSGG	1 cut(s)	1274
BcoDI	GTCTC	3 cut(s)	305, 474, 1271
BfaI	CTAG	2 cut(s)	924, 1167
BfoI	RGCGCY	1 cut(s)	39
BlpI	GCTNAGC	1 cut(s)	839
Bme1390I	CCNGG	7 cut(s)	338, 374, 571, 594, 1274, 1375, 1489
Bme18I	GGWCC	4 cut(s)	549, 590, 686, 811
BmeT110I	CYCGRG	2 cut(s)	260, 1358
BmgT120I	GGNCC	5 cut(s)	139, 549, 590, 686, 811
BmiI	GGNNCC	7 cut(s)	258, 384, 591, 687, 756, 1401, 1471
BmrFI	CCNGG	7 cut(s)	338, 374, 571, 594, 1274, 1375, 1489
BmsI	GCATC	5 cut(s)	436, 613, 1117, 1153, 1492
BpiI	GAAGAC	2 cut(s)	590, 1528
Bpu1102I	GCTNAGC	1 cut(s)	839
BpuEI	CTTGAG	3 cut(s)	398, 743, 1253
BpuMI	CCSGG	1 cut(s)	1274
BsaHI	GRCGYC	5 cut(s)	78, 153, 189, 207, 279
BsaJI	CCNNGG	8 cut(s)	142, 261, 356, 378, 1197, 1373, 1487, 1488
BsaWI	WCCGGW	3 cut(s)	175, 385, 1151
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 414, 444, 449, 479
Bsc4I	CCNNNNNNNGG	9 cut(s)	362, 379, 539, 751, 808, 1273, 1379, 1380, 1396
Bse118I	RCCGGY	1 cut(s)	851
Bse1I	ACTGG	2 cut(s)	1097, 1126
Bse3DI	GCAATG	1 cut(s)	1384
BseAI	TCCGGA	2 cut(s)	175, 385
BseBI	CCWGG	6 cut(s)	338, 374, 571, 594, 1375, 1489
BseDI	CCNNGG	8 cut(s)	142, 261, 356, 378, 1197, 1373, 1487, 1488
BseGI	GGATG	6 cut(s)	628, 733, 835, 1342, 1354, 1483
BseLI	CCNNNNNNNGG	9 cut(s)	362, 379, 539, 751, 808, 1273, 1379, 1380, 1396
BseMI	GCAATG	1 cut(s)	1384
BseMII	CTCAG	6 cut(s)	46, 121, 485, 681, 780, 830
BseNI	ACTGG	2 cut(s)	1097, 1126
BseRI	GAGGAG	4 cut(s)	35, 38, 43, 470
BseX3I	CGGCCG	1 cut(s)	399
BseXI	GCAGC	4 cut(s)	145, 694, 697, 1040
BseYI	CCCAGC	2 cut(s)	61, 802
BsgI	GTGCAG	1 cut(s)	506
Bsh1236I	CGCG	4 cut(s)	158, 353, 395, 404
Bsh1285I	CGRYCG	2 cut(s)	129, 402
BshFI	GGCC	6 cut(s)	141, 147, 377, 401, 437, 794
BsiEI	CGRYCG	2 cut(s)	129, 402
BsiHKAI	GWGCWC	1 cut(s)	414
BsiHKCI	CYCGRG	2 cut(s)	260, 1358
BsiSI	CCGG	5 cut(s)	176, 386, 852, 1152, 1274
BslFI	GGGAC	1 cut(s)	603
BslI	CCNNNNNNNGG	9 cut(s)	362, 379, 539, 751, 808, 1273, 1379, 1380, 1396
BsmAI	GTCTC	3 cut(s)	305, 474, 1271
BsmBI	CGTCTC	1 cut(s)	305
BsmFI	GGGAC	1 cut(s)	603
BsmI	GAATGC	1 cut(s)	937
BsnI	GGCC	6 cut(s)	141, 147, 377, 401, 437, 794
BsoBI	CYCGRG	2 cut(s)	260, 1358
Bsp1286I	GDGCHC	2 cut(s)	261, 414
Bsp13I	TCCGGA	2 cut(s)	175, 385
Bsp143I	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
Bsp1720I	GCTNAGC	1 cut(s)	839
BspANI	GGCC	6 cut(s)	141, 147, 377, 401, 437, 794
BspCNI	CTCAG	6 cut(s)	45, 120, 484, 682, 781, 831
BspEI	TCCGGA	2 cut(s)	175, 385
BspFNI	CGCG	4 cut(s)	158, 353, 395, 404
BspLI	GGNNCC	7 cut(s)	258, 384, 591, 687, 756, 1401, 1471
BspPI	GGATC	6 cut(s)	111, 167, 581, 749, 762, 1264
BspQI	GCTCTTC	1 cut(s)	114
BsrDI	GCAATG	1 cut(s)	1384
BsrFI	RCCGGY	1 cut(s)	851
BsrI	ACTGG	2 cut(s)	1097, 1126
BssAI	RCCGGY	1 cut(s)	851
BssECI	CCNNGG	8 cut(s)	142, 261, 356, 378, 1197, 1373, 1487, 1488
BssMI	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
BssNI	GRCGYC	5 cut(s)	78, 153, 189, 207, 279
BssSI	CACGAG	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	378, 1197
Bst2BI	CACGAG	1 cut(s)	20
Bst2UI	CCWGG	6 cut(s)	338, 374, 571, 594, 1375, 1489
Bst4CI	ACNGT	5 cut(s)	521, 616, 751, 1138, 1516
Bst6I	CTCTTC	1 cut(s)	114
BstACI	GRCGYC	5 cut(s)	78, 153, 189, 207, 279
BstC8I	GCNNGC	3 cut(s)	705, 1382, 1419
BstDEI	CTNAG	6 cut(s)	32, 107, 471, 690, 789, 839
BstDSI	CCRYGG	2 cut(s)	142, 356
BstENI	CCTNNNNNAGG	1 cut(s)	537
BstF5I	GGATG	6 cut(s)	628, 733, 835, 1342, 1354, 1483
BstFNI	CGCG	4 cut(s)	158, 353, 395, 404
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	4 cut(s)	38, 160, 355, 633
BstKTI	GATC	6 cut(s)	106, 175, 241, 576, 757, 1272
BstMAI	GTCTC	3 cut(s)	305, 474, 1271
BstMBI	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
BstMCI	CGRYCG	2 cut(s)	129, 402
BstMWI	GCNNNNNNNGC	5 cut(s)	130, 369, 401, 1199, 1386
BstNI	CCWGG	6 cut(s)	338, 374, 571, 594, 1375, 1489
BstSCI	CCNGG	7 cut(s)	336, 372, 569, 592, 1272, 1373, 1487
BstUI	CGCG	4 cut(s)	158, 353, 395, 404
BstV1I	GCAGC	4 cut(s)	145, 694, 697, 1040
BstV2I	GAAGAC	2 cut(s)	590, 1528
BstX2I	RGATCY	3 cut(s)	103, 172, 754
BstYI	RGATCY	3 cut(s)	103, 172, 754
BstZI	CGGCCG	1 cut(s)	399
BsuRI	GGCC	6 cut(s)	141, 147, 377, 401, 437, 794
BtgI	CCRYGG	2 cut(s)	142, 356
BtsCI	GGATG	6 cut(s)	628, 733, 835, 1342, 1354, 1483
BtsI	GCAGTG	1 cut(s)	367
BtsIMutI	CAGTG	4 cut(s)	367, 621, 756, 1119
Cac8I	GCNNGC	3 cut(s)	705, 1382, 1419
CciNI	GCGGCCGC	1 cut(s)	399
CfoI	GCGC	4 cut(s)	38, 160, 355, 633
Cfr10I	RCCGGY	1 cut(s)	851
Cfr13I	GGNCC	5 cut(s)	139, 549, 590, 686, 811
CseI	GACGC	4 cut(s)	86, 161, 197, 215
CsiI	ACCWGGT	1 cut(s)	592
Csp6I	GTAC	3 cut(s)	250, 391, 1499
CviQI	GTAC	3 cut(s)	250, 391, 1499
DdeI	CTNAG	6 cut(s)	32, 107, 471, 690, 789, 839
DpnI	GATC	6 cut(s)	105, 174, 240, 575, 756, 1271
DpnII	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	3 cut(s)	145, 399, 435
EagI	CGGCCG	1 cut(s)	399
Eam1104I	CTCTTC	1 cut(s)	114
EarI	CTCTTC	1 cut(s)	114
EciI	GGCGGA	1 cut(s)	435
Ecl136II	GAGCTC	1 cut(s)	412
EclXI	CGGCCG	1 cut(s)	399
Eco130I	CCWWGG	2 cut(s)	378, 1197
Eco147I	AGGCCT	1 cut(s)	377
Eco24I	GRGCYC	2 cut(s)	261, 414
Eco47I	GGWCC	4 cut(s)	549, 590, 686, 811
Eco52I	CGGCCG	1 cut(s)	399
Eco53kI	GAGCTC	1 cut(s)	412
Eco57I	CTGAAG	2 cut(s)	289, 496
Eco88I	CYCGRG	2 cut(s)	260, 1358
EcoICRI	GAGCTC	1 cut(s)	412
EcoNI	CCTNNNNNAGG	1 cut(s)	537
EcoO109I	RGGNCCY	2 cut(s)	590, 686
EcoRI	GAATTC	1 cut(s)	182
EcoRII	CCWGG	6 cut(s)	336, 372, 569, 592, 1373, 1487
EcoT14I	CCWWGG	2 cut(s)	378, 1197
EcoT38I	GRGCYC	2 cut(s)	261, 414
ErhI	CCWWGG	2 cut(s)	378, 1197
Esp3I	CGTCTC	1 cut(s)	305
FalI	AAGNNNNNCTT	4 cut(s)	1035, 1067, 1040, 1072
FaqI	GGGAC	1 cut(s)	603
FauI	CCCGC	2 cut(s)	65, 1373
FblI	GTMKAC	3 cut(s)	10, 87, 267
FokI	GGATG	6 cut(s)	635, 740, 842, 1349, 1361, 1470
FriOI	GRGCYC	2 cut(s)	261, 414
FspBI	CTAG	2 cut(s)	924, 1167
GlaI	GCGC	4 cut(s)	37, 159, 354, 632
GsaI	CCCAGC	2 cut(s)	65, 806
HaeII	RGCGCY	1 cut(s)	39
HaeIII	GGCC	6 cut(s)	141, 147, 377, 401, 437, 794
HapII	CCGG	5 cut(s)	176, 386, 852, 1152, 1274
HgaI	GACGC	4 cut(s)	86, 161, 197, 215
HhaI	GCGC	4 cut(s)	38, 160, 355, 633
Hin1I	GRCGYC	5 cut(s)	78, 153, 189, 207, 279
Hin6I	GCGC	4 cut(s)	36, 158, 353, 631
HinP1I	GCGC	4 cut(s)	36, 158, 353, 631
HincII	GTYRAC	4 cut(s)	11, 88, 268, 736
HindII	GTYRAC	4 cut(s)	11, 88, 268, 736
HindIII	AAGCTT	4 cut(s)	899, 1049, 1248, 1415
HinfI	GANTC	7 cut(s)	7, 12, 666, 785, 995, 1340, 1442
HpaII	CCGG	5 cut(s)	176, 386, 852, 1152, 1274
HphI	GGTGA	1 cut(s)	1136
Hpy166II	GTNNAC	6 cut(s)	11, 27, 88, 268, 526, 736
Hpy188I	TCNGA	6 cut(s)	223, 646, 790, 1091, 1105, 1264
Hpy8I	GTNNAC	6 cut(s)	11, 27, 88, 268, 526, 736
HpyAV	CCTTC	5 cut(s)	268, 286, 948, 997, 1339
HpyCH4III	ACNGT	5 cut(s)	521, 616, 751, 1138, 1516
HpyCH4IV	ACGT	2 cut(s)	279, 606
HpyCH4V	TGCA	6 cut(s)	72, 487, 626, 872, 893, 1370
HpyF10VI	GCNNNNNNNGC	5 cut(s)	130, 369, 401, 1199, 1386
HpyF3I	CTNAG	6 cut(s)	32, 107, 471, 690, 789, 839
HpySE526I	ACGT	2 cut(s)	279, 606
Hsp92I	GRCGYC	5 cut(s)	78, 153, 189, 207, 279
HspAI	GCGC	4 cut(s)	36, 158, 353, 631
Kpn2I	TCCGGA	2 cut(s)	175, 385
Kzo9I	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
LguI	GCTCTTC	1 cut(s)	114
LmnI	GCTCC	5 cut(s)	48, 256, 388, 409, 1135
Lsp1109I	GCAGC	4 cut(s)	145, 694, 697, 1040
LweI	GCATC	5 cut(s)	436, 613, 1117, 1153, 1492
MabI	ACCWGGT	1 cut(s)	592
MaeI	CTAG	2 cut(s)	924, 1167
MaeII	ACGT	2 cut(s)	279, 606
MaeIII	GTNAC	3 cut(s)	565, 607, 913
MalI	GATC	6 cut(s)	105, 174, 240, 575, 756, 1271
MboI	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
MfeI	CAATTG	1 cut(s)	873
MflI	RGATCY	3 cut(s)	103, 172, 754
MhlI	GDGCHC	2 cut(s)	261, 414
MlsI	TGGCCA	1 cut(s)	437
MluCI	AATT	6 cut(s)	182, 441, 653, 857, 873, 1526
MluNI	TGGCCA	1 cut(s)	437
MlyI	GAGTC	6 cut(s)	6, 16, 779, 989, 1349, 1451
MmeI	TCCRAC	3 cut(s)	1069, 1157, 1288
Mox20I	TGGCCA	1 cut(s)	437
MroI	TCCGGA	2 cut(s)	175, 385
MroXI	GAANNNNTTC	1 cut(s)	329
MscI	TGGCCA	1 cut(s)	437
MseI	TTAA	3 cut(s)	318, 1245, 1521
MslI	CAYNNNNRTG	1 cut(s)	1375
Msp20I	TGGCCA	1 cut(s)	437
MspA1I	CMGCKG	2 cut(s)	806, 970
MspI	CCGG	5 cut(s)	176, 386, 852, 1152, 1274
MspR9I	CCNGG	7 cut(s)	338, 374, 571, 594, 1274, 1375, 1489
MunI	CAATTG	1 cut(s)	873
Mva1269I	GAATGC	1 cut(s)	937
MvaI	CCWGG	6 cut(s)	338, 374, 571, 594, 1375, 1489
MvnI	CGCG	4 cut(s)	158, 353, 395, 404
MwoI	GCNNNNNNNGC	5 cut(s)	130, 369, 401, 1199, 1386
NciI	CCSGG	1 cut(s)	1274
NdeII	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
NlaIV	GGNNCC	7 cut(s)	258, 384, 591, 687, 756, 1401, 1471
NmuCI	GTSAC	2 cut(s)	607, 913
NotI	GCGGCCGC	1 cut(s)	399
OliI	CACNNNNGTG	1 cut(s)	1375
PaeR7I	CTCGAG	1 cut(s)	1358
PasI	CCCWGGG	1 cut(s)	1488
PceI	AGGCCT	1 cut(s)	377
PciSI	GCTCTTC	1 cut(s)	114
PcsI	WCGNNNNNNNCGW	8 cut(s)	84, 93, 96, 207, 210, 219, 234, 276
PctI	GAATGC	1 cut(s)	937
PdmI	GAANNNNTTC	1 cut(s)	329
PfeI	GAWTC	1 cut(s)	666
PflFI	GACNNNGTC	1 cut(s)	281
PflMI	CCANNNNNTGG	3 cut(s)	379, 751, 1396
PfoI	TCCNGGA	1 cut(s)	1272
PleI	GAGTC	6 cut(s)	6, 15, 779, 989, 1348, 1450
PpsI	GAGTC	6 cut(s)	6, 15, 779, 989, 1348, 1450
PpuMI	RGGWCCY	2 cut(s)	590, 686
Psp124BI	GAGCTC	1 cut(s)	414
Psp5II	RGGWCCY	2 cut(s)	590, 686
Psp6I	CCWGG	6 cut(s)	336, 372, 569, 592, 1373, 1487
PspFI	CCCAGC	2 cut(s)	61, 802
PspGI	CCWGG	6 cut(s)	336, 372, 569, 592, 1373, 1487
PspN4I	GGNNCC	7 cut(s)	258, 384, 591, 687, 756, 1401, 1471
PspPI	GGNCC	5 cut(s)	139, 549, 590, 686, 811
PspPPI	RGGWCCY	2 cut(s)	590, 686
PsuI	RGATCY	3 cut(s)	103, 172, 754
PsyI	GACNNNGTC	1 cut(s)	281
PvuII	CAGCTG	1 cut(s)	970
RsaI	GTAC	3 cut(s)	251, 392, 1500
RsaNI	GTAC	3 cut(s)	250, 391, 1499
RseI	CAYNNNNRTG	1 cut(s)	1375
SacI	GAGCTC	1 cut(s)	414
SalI	GTCGAC	3 cut(s)	9, 86, 266
SapI	GCTCTTC	1 cut(s)	114
SaqAI	TTAA	3 cut(s)	318, 1245, 1521
Sau3AI	GATC	6 cut(s)	103, 172, 238, 573, 754, 1269
Sau96I	GGNCC	5 cut(s)	139, 549, 590, 686, 811
SchI	GAGTC	6 cut(s)	6, 16, 779, 989, 1349, 1451
ScrFI	CCNGG	7 cut(s)	338, 374, 571, 594, 1274, 1375, 1489
SduI	GDGCHC	2 cut(s)	261, 414
SexAI	ACCWGGT	1 cut(s)	592
SfaNI	GCATC	5 cut(s)	436, 613, 1117, 1153, 1492
Sfr274I	CTCGAG	1 cut(s)	1358
SgrDI	CGTCGACG	1 cut(s)	86
SinI	GGWCC	4 cut(s)	549, 590, 686, 811
SlaI	CTCGAG	1 cut(s)	1358
SmiMI	CAYNNNNRTG	1 cut(s)	1375
SmlI	CTYRAG	4 cut(s)	413, 722, 1232, 1358
SmoI	CTYRAG	4 cut(s)	413, 722, 1232, 1358
Sse9I	AATT	6 cut(s)	182, 441, 653, 857, 873, 1526
SseBI	AGGCCT	1 cut(s)	377
SspMI	CTAG	2 cut(s)	924, 1167
SstI	GAGCTC	1 cut(s)	414
StuI	AGGCCT	1 cut(s)	377
StyD4I	CCNGG	7 cut(s)	336, 372, 569, 592, 1272, 1373, 1487
StyI	CCWWGG	2 cut(s)	378, 1197
TaaI	ACNGT	5 cut(s)	521, 616, 751, 1138, 1516
TaiI	ACGT	2 cut(s)	282, 609
TaqI	TCGA	9 cut(s)	10, 87, 117, 186, 228, 267, 861, 1343, 1359
TaqII	GACCGA	1 cut(s)	143
TasI	AATT	6 cut(s)	182, 441, 653, 857, 873, 1526
TauI	GCSGC	6 cut(s)	83, 158, 163, 398, 401, 404
TfiI	GAWTC	1 cut(s)	666
Tru1I	TTAA	3 cut(s)	318, 1245, 1521
Tru9I	TTAA	3 cut(s)	318, 1245, 1521
TscAI	CASTG	4 cut(s)	374, 621, 756, 1126
TseFI	GTSAC	2 cut(s)	607, 913
TseI	GCWGC	4 cut(s)	133, 707, 710, 1028
Tsp45I	GTSAC	2 cut(s)	607, 913
TspDTI	ATGAA	1 cut(s)	1587
TspGWI	ACGGA	4 cut(s)	422, 467, 1088, 1482
TspRI	CASTG	4 cut(s)	374, 621, 756, 1126
Tth111I	GACNNNGTC	1 cut(s)	281
Van91I	CCANNNNNTGG	3 cut(s)	379, 751, 1396
VpaK11BI	GGWCC	4 cut(s)	549, 590, 686, 811
XagI	CCTNNNNNAGG	1 cut(s)	537
XapI	RAATTY	3 cut(s)	182, 653, 857
XhoI	CTCGAG	1 cut(s)	1358
XmiI	GTMKAC	3 cut(s)	10, 87, 267
XmnI	GAANNNNTTC	1 cut(s)	329
XspI	CTAG	2 cut(s)	924, 1167
ZraI	GACGTC	1 cut(s)	280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.