Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0007275

Physical Location & Seq

Genomic Coordinates Forward (+)

26041802 .. 26047624

Gene Structure 5823 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1189700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3609 bp

ATGAGGACGAAGAACAGCAACACCAACAGCGCCAGCGAGTCTCGATTCTTAGGAACCATTTCAGCTTCGTCGCTTCGAAACCTCCTTCCCAGATCCATGTCCACTAAGAACAGCAAATCCATCTTCAACCTACGAAACCATAATTCCGAAAATACCCCTCCGCTCAGTCCCAACATCCAGATCAATCACCATGCCGATGACGACTCCTCCGCTTCACCAGTCAAGCCTGTACTCTCCGATTCGTCCAAATCTAAGATCACAGAACCGAACGGCCAGAAACAAGCATTGCCGGTGGTGAAGAGTGAGATTGATCAATCCGACGGTCAGGGAGAACTCCTGCCACCTCTAGACCCATCAGTGAAGGTTGTGGTGAGAATCAGACCAACTAAAGATGGTGCAAATTGGGGAGATCGGACTGTTAAGAAGGTCTCGCCACGCAGTTTATCAGTTGGGGACCGTACATTTTCATTTGATTCGGTTTTTGATTCGAAATCCGGACAGGAGGATGTTTTTCAGACGGTTGGTGTACCTGTGGTTAAGAATGCCTTGGCCGGTTACAATACTTCAATCTTGTCATATGGACAGAGCGGAAGTGGTAAGACATACACGCTATGGGGTCCACCAAGTGCCATGGTTGAGGATGCCTCTCCTGGAAGTTGCCAGGGCATTGTTCCACGCATCTTCCAAATGCTGTTTTCTGAGATTCAAAAGGAGCAAGAGAATTCCGAAGGGAAACAGTTGAATTACCAGTTCCGTTGTTCATTTCTCGAGATATATAACGAACAAATTGGAGATTTACTTGATCCAACCCTGCGGAACCTTAAGATCAAGGATGACCCCAAAAATGGATTTTATGTTGAGAATCTAACTGAGGAGTATGTGACAAGCTATGATGATGTGACACAAATTCTGATTAAGGGGCTTTCAAGTAGAAAAGTTGGAGCAACTAGCATGAACTCCAAGAGCTCTAGATCCCATATTGTTTGTACATTCATCATCGAGTCATGGTGTAAGGAGAGCTCATCCAAGTGCTTTGGTAGCTCAAAAACAAGCAGGATGAGTTTTGTTGATCTAGCTGGCCTGGACAGAAATAAAGGCGATGATGACACAGGTAGACAATGCGCGAGGGACGACAAACATGTGAAGAAGTCCTTGTCACGGCTTGGGCTTTTGGTAAATACTCTTGCAAAAGCGCCCCAGTCTGAAAAATCTGAAGATTTACCATATAAGTCTTCCTGCTTAACACATTTACTGCGAGAATCAATTGGTGGCAACTCAAAACTTACAGTCATCTGTGCGGTTTCCCCAGACAACAAAAATAATGGCGAGATACTGCGAACTTTAAGGTTTGGAGAACGAGCGAAATCTGTTAGGAATGAACCAGTAATAAATGAAATAACAGAGGATGATGTTAATGATCTGAGTGATCAAATTCGCCAGTTAAAGGAAGAACTTATAAGAGCAAAGTCTAGTGGCTCACTTGTGATTAAGAATGGATATTTCCAAGGGAGAAATGTACGTGAAAGCTTGAATCAATTGCGGGTGAGCCTGAATCGATCTTTGATTTTACCCAGCATAGATAATGATTCTGATGAAGAGGTAAATGTGGATGAACATGATGTAAGGGAACTACGTAAGCAGCTAGATGAGCTGCATAATTCTTATGAACATGATATTGGGGACAATTCTGTCAGTAAAGATTCTGCTCAGTTGGGTGGAAGTTGTTATGCAGACTCAATAAGTGAAGATGACTTTCATAGTTCAGACGAAAAGGAGATTGAGGTATCTGAAGAAATTGATCTGGATTTTTCTCAGAATGAGCTACCTCCCAAGGACAACTTCGAATTGGCAGAAGAGATTTCTCCTACCACCACTGGTCCAGTAAACAGAAGCGGTGTTTCAATCAGTTTATGCTGTCGGTCCCCAGTCCTCCAAGACCCAACATTGTCCGAGTCTCCAAAACTTGGAAATGCACAAAGAAAGAGCGTCACTTTTGCTCCAAGCTGTTCAGTTAGTCAGAACAACGTATCAGACAGTTCCAAGTTCAAGTCAGATGTATTGAGACAGTCGCCGAATCAAAGTGAAAATATCCAATCCTCTTTGCGCTCAAGCAAAATATTTCCAGGCCCCACTGAGTCATTGGCTGCCAGCCTCCAGAGGGGCTTGCAGATAATTGACTACCACCAGCAGAACTCTGAATCAAGAAAATCCGCAGTCTCGTTCTCCTTTGAGCACTTGGCACTGAAACCTGTTAAAGCTAATTCTTCATCTCAAACATTACCAGAAACAAGGCCATCCATAGATGGGGCATCTTCTTCGTTCCTTTGTGCATCATGCAAAAGAAGAGTGTATGAAGATGATACAAATGAGGTCCCGGATAGCTTGAAGACATGGACTGTAGCAGTTGAGGAAGCAGGAAATCCTAACCAAATGACCGAGGATGTAGTGGAAGAAGCTAAAAAGGAGGAGCTTGAGAATCGTTGCAAGGAGCAAGCAGCTAAAATTGAGCAGTTAAATCAACTGATAGAGCAATTCAAAAGTTGTGCAGATAATGGTAAAGAAATGATACCATATGAGGAGTTCAAAGATGGAAAGAAGCTCGTGAGGGGCAGTTCTGTTGATATTCACCAACCAGAGACTATAAAGGAGAAATGTGAAATACAGGAAGTTCAGAATCAGTTCGATCTTGGGGATGGGAATGCAGATTTTGATATGGATGAGAAGGAAGTTCAGATGTTAAGGGCCAAATTGCAGTCACGTACTGATGCATCACCCAACAAGTCCACTGAGAGACTGAGATCCTCTTTATTGTCACGATCCATCCAACTGCGAAAAAGTAGCACATTTCGAGATAACAGTGAGGAAGAACTGGAGAAGGAAAGACAGAGATGGACAGAAATGGAGAGTGATTGGATTTCCTTAACTGATGACTTGCGAGTAGATCTTGAATCCATCCGCCGGCGAGCAGAGAGAGTGGAGATGGAATTGAAATTGGAAAAGCAAAACACTGAAGAGTTGGATGATGTGCTTCAAAGATCTGTCCTTGGGCATGCTCGCATGGTTGAACACTATGTTGAACTACAAGATAAATATAATGGCTTGGTTGCAAAGTACCGTGCAATCATGGCAGGAATAGCAGAAGTGAAGAGGGCAGCGGCAAAAGCGGGAGCAAAAGGTCGTGGATCTCGCTTTTCAAAATCCCTGGCAACAGAGCTCTCAGTTTTGAGAGTGGAAAGAGAGAGGGAGAGGGAGCTTTTGAAGAAGGAGAACAAGAGTCTCAAGATTCAACTGAGAGATACTGCAGAAGCTGTTCATGCTGCCGGAGAACTCCTTGTTAGGCTTAGAGAAGCTGAACATTCCGCATCAGTTGCAGAGGAGAACTTTACGAATGTGCATCAAGAAAACGAAAAGTTGAAGAAGCAAATGGAGAAGCTTAAAAGAAAGCACAAGATGGAGATGATCACCATGAAGCAGTACATGGCAGATAGTAAACTGCCAGAGTCCGCTTTGCAACCACTATACCGGGAGGACTCTGTCATTCCACACAACACAGACGATGATCAGGCATGGAGAGCAGAATTCGGAGCTATATATCAAGAGCATTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005873 GO:0005875 GO:0006810 GO:0006890 GO:0006928 GO:0007017 GO:0007018 GO:0007049 GO:0008150 GO:0008283 GO:0008574 GO:0009987 GO:0015630 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019882 GO:0019884 GO:0019886 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0051179 GO:0051234 GO:0097159 GO:1901363 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1203

Amino Acids

134.8

Weight (kDa)

5.52

Isoelectric Point (pI)

56.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	120 - 267	1.4e-20	Microtubule binding
Kinesin	PF00225	142 - 457	1e-87	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20150 AT3G20150 AT4G26660 AT5G55520 AT5G55520
fragaria_vesca	FvH4_3g23930 FvH4_3g23930 FvH4_3g23930
malus_domestica	MD03G1189700.v1.1 MD11G1206000.v1.1
prunus_persica	Prupe.4G231600_v2.0.a1
pyrus_communis	pycom03g14250 pycom03g14260 pycom11g17870
rosa_chinensis	RchiOBHm_Chr5g0042431
rosa_laevigata	RLG00000034123
rosa_multiflora	Rmu_sc0002779.1_g000010 Rmu_sc0003219.1_g000025
rosa_roxburghii	Rroxscaffold_1G00038280
rosa_rugosa	Rorug05G0200000
rosa_samantha	Rh5AG286200 Rh5BG290900 Rh5CG322900 Rh5DG300600
rosa_wichuraiana	Rw5G026560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1457
AasI	GACNNNNNNGTC	1 cut(s)	1688
AccB7I	CCANNNNNTGG	1 cut(s)	1964
AccBSI	CCGCTC	2 cut(s)	163, 588
AccI	GTMKAC	1 cut(s)	1114
AccII	CGCG	1 cut(s)	1124
AccIII	TCCGGA	1 cut(s)	494
AclWI	GGATC	6 cut(s)	87, 797, 966, 2793, 2811, 3190
AcoI	YGGCCR	2 cut(s)	271, 549
AcsI	RAATTY	4 cut(s)	721, 906, 1431, 3578
AcuI	CTGAAG	3 cut(s)	1233, 1809, 3030
AdeI	CACNNNGTG	1 cut(s)	626
AfaI	GTAC	8 cut(s)	231, 460, 528, 988, 1518, 2761, 3113, 3476
AfiI	CCNNNNNNNGG	7 cut(s)	845, 1158, 1444, 1964, 2158, 2304, 2958
AflII	CTTAAG	1 cut(s)	821
AflIII	ACRYGT	1 cut(s)	1138
AjnI	CCWGG	5 cut(s)	649, 660, 1080, 2122, 3201
AjuI	GAANNNNNNNTTGG	4 cut(s)	1659, 1691, 1823, 1855
AloI	GAACNNNNNNTCC	2 cut(s)	101, 133
Alw21I	GWGCWC	4 cut(s)	968, 1022, 2235, 3216
Alw26I	GTCTC	8 cut(s)	45, 433, 1959, 2056, 2221, 2630, 2785, 3281
AlwI	GGATC	6 cut(s)	87, 797, 966, 2793, 2811, 3190
AlwNI	CAGNNNCTG	1 cut(s)	3308
Ama87I	CYCGRG	1 cut(s)	767
Aor13HI	TCCGGA	1 cut(s)	494
AoxI	GGCC	6 cut(s)	271, 549, 1078, 2125, 2291, 2742
ApeKI	GCWGC	6 cut(s)	1639, 1651, 2144, 2495, 3152, 3317
ApoI	RAATTY	4 cut(s)	721, 906, 1431, 3578
Asp700I	GAANNNNTTC	3 cut(s)	58, 2678, 3309
AspLEI	GCGC	4 cut(s)	32, 1124, 1195, 2106
AspS9I	GGNCC	7 cut(s)	454, 617, 1877, 1920, 2126, 2371, 2742
AsuC2I	CCSGG	2 cut(s)	2375, 3524
AsuHPI	GGTGA	8 cut(s)	179, 207, 307, 382, 1555, 2618, 2763, 3454
AsuII	TTCGAA	3 cut(s)	76, 488, 1842
AvaI	CYCGRG	1 cut(s)	767
AvaII	GGWCC	5 cut(s)	454, 617, 1877, 1920, 2371
BanII	GRGCYC	3 cut(s)	968, 1022, 3216
BauI	CACGAG	1 cut(s)	2600
BbsI	GAAGAC	2 cut(s)	1224, 2393
Bbv12I	GWGCWC	4 cut(s)	968, 1022, 2235, 3216
BbvI	GCAGC	6 cut(s)	1638, 1651, 2131, 2507, 3164, 3304
BceAI	ACGGC	2 cut(s)	286, 1175
BcgI	CGANNNNNNTGC	2 cut(s)	2298, 2332
BciT130I	CCWGG	5 cut(s)	651, 662, 1082, 2124, 3203
BclI	TGATCA	4 cut(s)	310, 1426, 3459, 3559
BcnI	CCSGG	2 cut(s)	2375, 3524
BcoDI	GTCTC	8 cut(s)	45, 433, 1959, 2056, 2221, 2630, 2785, 3281
BfaI	CTAG	6 cut(s)	347, 948, 969, 1073, 1470, 1643
BfmI	CTRYAG	2 cut(s)	2397, 3300
BfoI	RGCGCY	2 cut(s)	33, 1196
BfrI	CTTAAG	1 cut(s)	821
BglII	AGATCT	2 cut(s)	2941, 3035
BisI	GCNGC	7 cut(s)	1640, 1652, 2145, 2496, 3153, 3156, 3318
BlsI	GCNGC	7 cut(s)	1641, 1653, 2146, 2497, 3154, 3157, 3319
Bme1390I	CCNGG	7 cut(s)	651, 662, 1082, 2124, 2375, 3203, 3524
Bme18I	GGWCC	5 cut(s)	454, 617, 1877, 1920, 2371
BmeT110I	CYCGRG	1 cut(s)	767
BmgT120I	GGNCC	7 cut(s)	454, 617, 1877, 1920, 2126, 2371, 2742
BmiI	GGNNCC	7 cut(s)	55, 455, 618, 818, 1922, 2128, 2373
BmrFI	CCNGG	7 cut(s)	651, 662, 1082, 2124, 2375, 3203, 3524
BmrI	ACTGGG	2 cut(s)	1192, 1919
BmsI	GCATC	8 cut(s)	631, 687, 2318, 2339, 2755, 2777, 3371, 3403
BmuI	ACTGGG	2 cut(s)	1192, 1919
BpiI	GAAGAC	2 cut(s)	1224, 2393
BplI	GAGNNNNNCTC	2 cut(s)	629, 661
BpmI	CTGGAG	2 cut(s)	2138, 2891
Bpu14I	TTCGAA	3 cut(s)	76, 488, 1842
BpuEI	CTTGAG	3 cut(s)	2092, 2492, 3263
BpuMI	CCSGG	2 cut(s)	2375, 3524
Bsa29I	ATCGAT	1 cut(s)	1555
BsaAI	YACGTR	3 cut(s)	1520, 1634, 2759
BsaI	GGTCTC	1 cut(s)	433
BsaJI	CCNNGG	8 cut(s)	546, 630, 661, 1504, 1830, 2436, 3043, 3201
BsaWI	WCCGGW	1 cut(s)	494
BsaXI	ACNNNNNCTCC	4 cut(s)	191, 221, 1981, 2011
Bsc4I	CCNNNNNNNGG	7 cut(s)	845, 1158, 1444, 1964, 2158, 2304, 2958
Bse118I	RCCGGY	3 cut(s)	289, 551, 2958
Bse1I	ACTGG	9 cut(s)	218, 748, 1198, 1382, 1438, 1879, 1880, 1925, 2874
Bse3DI	GCAATG	1 cut(s)	284
BseAI	TCCGGA	1 cut(s)	494
BseBI	CCWGG	5 cut(s)	651, 662, 1082, 2124, 3203
BseCI	ATCGAT	1 cut(s)	1555
BseDI	CCNNGG	8 cut(s)	546, 630, 661, 1504, 1830, 2436, 3043, 3201
BseLI	CCNNNNNNNGG	7 cut(s)	845, 1158, 1444, 1964, 2158, 2304, 2958
BseMI	GCAATG	1 cut(s)	284
BseNI	ACTGG	9 cut(s)	218, 748, 1198, 1382, 1438, 1879, 1880, 1925, 2874
BseRI	GAGGAG	5 cut(s)	196, 887, 2480, 2591, 3389
BseXI	GCAGC	6 cut(s)	1638, 1651, 2131, 2507, 3164, 3304
BseYI	CCCAGC	1 cut(s)	1571
BsgI	GTGCAG	1 cut(s)	2565
Bsh1236I	CGCG	1 cut(s)	1124
BshFI	GGCC	6 cut(s)	273, 551, 1080, 2127, 2293, 2744
BshVI	ATCGAT	1 cut(s)	1555
BsiHKAI	GWGCWC	4 cut(s)	968, 1022, 2235, 3216
BsiHKCI	CYCGRG	1 cut(s)	767
BsiSI	CCGG	7 cut(s)	290, 495, 552, 2375, 2959, 3321, 3523
BslFI	GGGAC	6 cut(s)	153, 467, 1142, 1694, 1906, 2357
BslI	CCNNNNNNNGG	7 cut(s)	845, 1158, 1444, 1964, 2158, 2304, 2958
BsmAI	GTCTC	8 cut(s)	45, 433, 1959, 2056, 2221, 2630, 2785, 3281
BsmFI	GGGAC	6 cut(s)	153, 467, 1142, 1694, 1906, 2357
BsmI	GAATGC	2 cut(s)	547, 2704
BsnI	GGCC	6 cut(s)	273, 551, 1080, 2127, 2293, 2744
Bso31I	GGTCTC	1 cut(s)	433
BsoBI	CYCGRG	1 cut(s)	767
Bsp119I	TTCGAA	3 cut(s)	76, 488, 1842
Bsp1286I	GDGCHC	4 cut(s)	968, 1022, 2235, 3216
Bsp13I	TCCGGA	1 cut(s)	494
Bsp1407I	TGTACA	1 cut(s)	986
Bsp19I	CCATGG	1 cut(s)	630
BspANI	GGCC	6 cut(s)	273, 551, 1080, 2127, 2293, 2744
BspDI	ATCGAT	1 cut(s)	1555
BspEI	TCCGGA	1 cut(s)	494
BspFNI	CGCG	1 cut(s)	1124
BspLI	GGNNCC	7 cut(s)	55, 455, 618, 818, 1922, 2128, 2373
BspMAI	CTGCAG	1 cut(s)	3304
BspPI	GGATC	6 cut(s)	87, 797, 966, 2793, 2811, 3190
BspT104I	TTCGAA	3 cut(s)	76, 488, 1842
BspTI	CTTAAG	1 cut(s)	821
BspTNI	GGTCTC	1 cut(s)	433
BsrBI	CCGCTC	2 cut(s)	163, 588
BsrDI	GCAATG	1 cut(s)	284
BsrFI	RCCGGY	3 cut(s)	289, 551, 2958
BsrGI	TGTACA	1 cut(s)	986
BsrI	ACTGG	9 cut(s)	218, 748, 1198, 1382, 1438, 1879, 1880, 1925, 2874
BssAI	RCCGGY	3 cut(s)	289, 551, 2958
BssECI	CCNNGG	8 cut(s)	546, 630, 661, 1504, 1830, 2436, 3043, 3201
BssSI	CACGAG	1 cut(s)	2600
BssT1I	CCWWGG	5 cut(s)	546, 630, 1504, 1830, 3043
Bst2BI	CACGAG	1 cut(s)	2600
Bst2UI	CCWGG	5 cut(s)	651, 662, 1082, 2124, 3203
Bst6I	CTCTTC	6 cut(s)	293, 1590, 1848, 2338, 3006, 3140
BstAFI	CTTAAG	1 cut(s)	821
BstAPI	GCANNNNNTGC	1 cut(s)	3368
BstAUI	TGTACA	1 cut(s)	986
BstBAI	YACGTR	3 cut(s)	1520, 1634, 2759
BstBI	TTCGAA	3 cut(s)	76, 488, 1842
BstC8I	GCNNGC	9 cut(s)	34, 1078, 2149, 2165, 2493, 2960, 2964, 3051, 3055
BstDSI	CCRYGG	1 cut(s)	630
BstFNI	CGCG	1 cut(s)	1124
BstH2I	RGCGCY	2 cut(s)	33, 1196
BstHHI	GCGC	4 cut(s)	32, 1124, 1195, 2106
BstMAI	GTCTC	8 cut(s)	45, 433, 1959, 2056, 2221, 2630, 2785, 3281
BstMWI	GCNNNNNNNGC	8 cut(s)	1038, 1648, 3125, 3134, 3161, 3314, 3368, 3572
BstNI	CCWGG	5 cut(s)	651, 662, 1082, 2124, 3203
BstNSI	RCATGY	2 cut(s)	1142, 3053
BstSCI	CCNGG	7 cut(s)	649, 660, 1080, 2122, 2373, 3201, 3522
BstSFI	CTRYAG	2 cut(s)	2397, 3300
BstSNI	TACGTA	1 cut(s)	1634
BstUI	CGCG	1 cut(s)	1124
BstV1I	GCAGC	6 cut(s)	1638, 1651, 2131, 2507, 3164, 3304
BstV2I	GAAGAC	2 cut(s)	1224, 2393
BstX2I	RGATCY	6 cut(s)	92, 971, 2798, 2941, 3035, 3182
BstYI	RGATCY	6 cut(s)	92, 971, 2798, 2941, 3035, 3182
Bsu15I	ATCGAT	1 cut(s)	1555
BsuRI	GGCC	6 cut(s)	273, 551, 1080, 2127, 2293, 2744
BsuTUI	ATCGAT	1 cut(s)	1555
BtgI	CCRYGG	1 cut(s)	630
BtgZI	GCGATG	1 cut(s)	1113
BtsIMutI	CAGTG	7 cut(s)	363, 1872, 2130, 2240, 2784, 2863, 3006
Cac8I	GCNNGC	9 cut(s)	34, 1078, 2149, 2165, 2493, 2960, 2964, 3051, 3055
CaiI	CAGNNNCTG	1 cut(s)	3308
CfoI	GCGC	4 cut(s)	32, 1124, 1195, 2106
Cfr10I	RCCGGY	3 cut(s)	289, 551, 2958
Cfr13I	GGNCC	7 cut(s)	454, 617, 1877, 1920, 2126, 2371, 2742
ClaI	ATCGAT	1 cut(s)	1555
CseI	GACGC	1 cut(s)	1975
Csp6I	GTAC	8 cut(s)	230, 459, 527, 987, 1517, 2760, 3112, 3475
CviQI	GTAC	8 cut(s)	230, 459, 527, 987, 1517, 2760, 3112, 3475
DraIII	CACNNNGTG	1 cut(s)	626
DrdI	GACNNNNNNGTC	1 cut(s)	1688
DseDI	GACNNNNNNGTC	1 cut(s)	1688
EaeI	YGGCCR	2 cut(s)	271, 549
Eam1104I	CTCTTC	6 cut(s)	293, 1590, 1848, 2338, 3006, 3140
EarI	CTCTTC	6 cut(s)	293, 1590, 1848, 2338, 3006, 3140
EciI	GGCGGA	1 cut(s)	2945
Ecl136II	GAGCTC	3 cut(s)	966, 1020, 3214
Eco105I	TACGTA	1 cut(s)	1634
Eco130I	CCWWGG	5 cut(s)	546, 630, 1504, 1830, 3043
Eco24I	GRGCYC	3 cut(s)	968, 1022, 3216
Eco31I	GGTCTC	1 cut(s)	433
Eco47I	GGWCC	5 cut(s)	454, 617, 1877, 1920, 2371
Eco53kI	GAGCTC	3 cut(s)	966, 1020, 3214
Eco57I	CTGAAG	3 cut(s)	1233, 1809, 3030
Eco88I	CYCGRG	1 cut(s)	767
EcoICRI	GAGCTC	3 cut(s)	966, 1020, 3214
EcoO109I	RGGNCCY	2 cut(s)	2126, 2371
EcoRI	GAATTC	2 cut(s)	721, 3578
EcoRII	CCWGG	5 cut(s)	649, 660, 1080, 2122, 3201
EcoT14I	CCWWGG	5 cut(s)	546, 630, 1504, 1830, 3043
EcoT22I	ATGCAT	1 cut(s)	2770
EcoT38I	GRGCYC	3 cut(s)	968, 1022, 3216
ErhI	CCWWGG	5 cut(s)	546, 630, 1504, 1830, 3043
FalI	AAGNNNNNCTT	6 cut(s)	530, 562, 1136, 1168, 1823, 1855
FaqI	GGGAC	6 cut(s)	153, 467, 1142, 1694, 1906, 2357
FauI	CCCGC	2 cut(s)	1533, 3157
FauNDI	CATATG	2 cut(s)	577, 2572
FbaI	TGATCA	4 cut(s)	310, 1426, 3459, 3559
FblI	GTMKAC	1 cut(s)	1114
Fnu4HI	GCNGC	7 cut(s)	1640, 1652, 2145, 2496, 3153, 3156, 3318
FriOI	GRGCYC	3 cut(s)	968, 1022, 3216
Fsp4HI	GCNGC	7 cut(s)	1640, 1652, 2145, 2496, 3153, 3156, 3318
FspBI	CTAG	6 cut(s)	347, 948, 969, 1073, 1470, 1643
GlaI	GCGC	4 cut(s)	31, 1123, 1194, 2105
GluI	GCNGC	7 cut(s)	1640, 1652, 2145, 2496, 3153, 3156, 3318
GsaI	CCCAGC	1 cut(s)	1575
GsuI	CTGGAG	2 cut(s)	2138, 2891
HaeII	RGCGCY	2 cut(s)	33, 1196
HaeIII	GGCC	6 cut(s)	273, 551, 1080, 2127, 2293, 2744
HapII	CCGG	7 cut(s)	290, 495, 552, 2375, 2959, 3321, 3523
HgaI	GACGC	1 cut(s)	1975
HhaI	GCGC	4 cut(s)	32, 1124, 1195, 2106
Hin6I	GCGC	4 cut(s)	30, 1122, 1193, 2104
HinP1I	GCGC	4 cut(s)	30, 1122, 1193, 2104
HindIII	AAGCTT	2 cut(s)	1525, 3431
HpaII	CCGG	7 cut(s)	290, 495, 552, 2375, 2959, 3321, 3523
HphI	GGTGA	8 cut(s)	179, 207, 307, 382, 1555, 2618, 2763, 3454
Hpy166II	GTNNAC	7 cut(s)	102, 527, 620, 1115, 1885, 2784, 3491
Hpy8I	GTNNAC	7 cut(s)	102, 527, 620, 1115, 1885, 2784, 3491
Hpy99I	CGWCG	2 cut(s)	73, 323
HpyAV	CCTTC	7 cut(s)	95, 355, 418, 722, 2716, 2869, 3256
HpyCH4IV	ACGT	4 cut(s)	1519, 1633, 2025, 2758
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1038, 1648, 3125, 3134, 3161, 3314, 3368, 3572
HpySE526I	ACGT	4 cut(s)	1519, 1633, 2025, 2758
HspAI	GCGC	4 cut(s)	30, 1122, 1193, 2104
Kpn2I	TCCGGA	1 cut(s)	494
KroI	GCCGGC	1 cut(s)	2958
KroNI	GCCGGC	1 cut(s)	2960
Ksp22I	TGATCA	4 cut(s)	310, 1426, 3459, 3559
LmnI	GCTCC	8 cut(s)	712, 941, 2002, 2467, 2488, 3167, 3250, 3584
Lsp1109I	GCAGC	6 cut(s)	1638, 1651, 2131, 2507, 3164, 3304
LweI	GCATC	8 cut(s)	631, 687, 2318, 2339, 2755, 2777, 3371, 3403
MaeI	CTAG	6 cut(s)	347, 948, 969, 1073, 1470, 1643
MaeII	ACGT	4 cut(s)	1519, 1633, 2025, 2758
MaeIII	GTNAC	7 cut(s)	554, 880, 898, 1155, 1987, 2754, 2811
MbiI	CCGCTC	2 cut(s)	163, 588
MfeI	CAATTG	2 cut(s)	1263, 1535
MflI	RGATCY	6 cut(s)	92, 971, 2798, 2941, 3035, 3182
MhlI	GDGCHC	4 cut(s)	968, 1022, 2235, 3216
MlyI	GAGTC	9 cut(s)	47, 197, 1010, 1727, 1961, 2144, 3283, 3509, 3524
MmeI	TCCRAC	5 cut(s)	342, 830, 919, 2848, 2997
Mph1103I	ATGCAT	1 cut(s)	2770
MreI	CGCCGGCG	1 cut(s)	2958
MroI	TCCGGA	1 cut(s)	494
MroNI	GCCGGC	1 cut(s)	2958
MroXI	GAANNNNTTC	3 cut(s)	58, 2678, 3309
MslI	CAYNNNNRTG	2 cut(s)	195, 1027
MspA1I	CMGCKG	1 cut(s)	3155
MspCI	CTTAAG	1 cut(s)	821
MspI	CCGG	7 cut(s)	290, 495, 552, 2375, 2959, 3321, 3523
MspR9I	CCNGG	7 cut(s)	651, 662, 1082, 2124, 2375, 3203, 3524
MunI	CAATTG	2 cut(s)	1263, 1535
Mva1269I	GAATGC	2 cut(s)	547, 2704
MvaI	CCWGG	5 cut(s)	651, 662, 1082, 2124, 3203
MvnI	CGCG	1 cut(s)	1124
MwoI	GCNNNNNNNGC	8 cut(s)	1038, 1648, 3125, 3134, 3161, 3314, 3368, 3572
NaeI	GCCGGC	1 cut(s)	2960
NciI	CCSGG	2 cut(s)	2375, 3524
NcoI	CCATGG	1 cut(s)	630
NdeI	CATATG	2 cut(s)	577, 2572
NgoMIV	GCCGGC	1 cut(s)	2958
NlaIV	GGNNCC	7 cut(s)	55, 455, 618, 818, 1922, 2128, 2373
NmuCI	GTSAC	6 cut(s)	880, 898, 1155, 1987, 2754, 2811
NsiI	ATGCAT	1 cut(s)	2770
NspI	RCATGY	2 cut(s)	1142, 3053
NspV	TTCGAA	3 cut(s)	76, 488, 1842
PaeI	GCATGC	1 cut(s)	3053
PaeR7I	CTCGAG	1 cut(s)	767
PciI	ACATGT	1 cut(s)	1138
PctI	GAATGC	2 cut(s)	547, 2704
PdiI	GCCGGC	1 cut(s)	2960
PdmI	GAANNNNTTC	3 cut(s)	58, 2678, 3309
PflFI	GACNNNGTC	1 cut(s)	3533
PflMI	CCANNNNNTGG	1 cut(s)	1964
PfoI	TCCNGGA	2 cut(s)	649, 2373
PkrI	GCNGC	7 cut(s)	1641, 1653, 2146, 2497, 3154, 3157, 3319
PleI	GAGTC	9 cut(s)	46, 197, 1009, 1727, 1960, 2143, 3282, 3508, 3524
PpsI	GAGTC	9 cut(s)	46, 197, 1009, 1727, 1960, 2143, 3282, 3508, 3524
Ppu21I	YACGTR	3 cut(s)	1520, 1634, 2759
PpuMI	RGGWCCY	1 cut(s)	2371
PscI	ACATGT	1 cut(s)	1138
PsiI	TTATAA	1 cut(s)	1457
Psp124BI	GAGCTC	3 cut(s)	968, 1022, 3216
Psp5II	RGGWCCY	1 cut(s)	2371
Psp6I	CCWGG	5 cut(s)	649, 660, 1080, 2122, 3201
PspFI	CCCAGC	1 cut(s)	1571
PspGI	CCWGG	5 cut(s)	649, 660, 1080, 2122, 3201
PspN4I	GGNNCC	7 cut(s)	55, 455, 618, 818, 1922, 2128, 2373
PspPI	GGNCC	7 cut(s)	454, 617, 1877, 1920, 2126, 2371, 2742
PspPPI	RGGWCCY	1 cut(s)	2371
PstI	CTGCAG	1 cut(s)	3304
PstNI	CAGNNNCTG	1 cut(s)	3308
PsuI	RGATCY	6 cut(s)	92, 971, 2798, 2941, 3035, 3182
PsyI	GACNNNGTC	1 cut(s)	3533
RsaI	GTAC	8 cut(s)	231, 460, 528, 988, 1518, 2761, 3113, 3476
RsaNI	GTAC	8 cut(s)	230, 459, 527, 987, 1517, 2760, 3112, 3475
RseI	CAYNNNNRTG	2 cut(s)	195, 1027
SacI	GAGCTC	3 cut(s)	968, 1022, 3216
SatI	GCNGC	7 cut(s)	1640, 1652, 2145, 2496, 3153, 3156, 3318
Sau96I	GGNCC	7 cut(s)	454, 617, 1877, 1920, 2126, 2371, 2742
SchI	GAGTC	9 cut(s)	47, 197, 1010, 1727, 1961, 2144, 3283, 3509, 3524
ScrFI	CCNGG	7 cut(s)	651, 662, 1082, 2124, 2375, 3203, 3524
SduI	GDGCHC	4 cut(s)	968, 1022, 2235, 3216
SfaNI	GCATC	8 cut(s)	631, 687, 2318, 2339, 2755, 2777, 3371, 3403
SfcI	CTRYAG	2 cut(s)	2397, 3300
Sfr274I	CTCGAG	1 cut(s)	767
SfuI	TTCGAA	3 cut(s)	76, 488, 1842
SgrAI	CRCCGGYG	1 cut(s)	2958
SinI	GGWCC	5 cut(s)	454, 617, 1877, 1920, 2371
SlaI	CTCGAG	1 cut(s)	767
SmiMI	CAYNNNNRTG	2 cut(s)	195, 1027
SmlI	CTYRAG	5 cut(s)	767, 821, 2107, 2471, 3278
SmoI	CTYRAG	5 cut(s)	767, 821, 2107, 2471, 3278
SnaBI	TACGTA	1 cut(s)	1634
SphI	GCATGC	1 cut(s)	3053
SspI	AATATT	1 cut(s)	2118
SspMI	CTAG	6 cut(s)	347, 948, 969, 1073, 1470, 1643
SstI	GAGCTC	3 cut(s)	968, 1022, 3216
StyD4I	CCNGG	7 cut(s)	649, 660, 1080, 2122, 2373, 3201, 3522
StyI	CCWWGG	5 cut(s)	546, 630, 1504, 1830, 3043
TaiI	ACGT	4 cut(s)	1522, 1636, 2028, 2761
TaqI	TCGA	9 cut(s)	43, 76, 488, 768, 999, 1555, 1842, 2682, 2848
TaqII	GACCGA	2 cut(s)	1908, 2450
TatI	WGTACW	3 cut(s)	229, 986, 3474
TauI	GCSGC	1 cut(s)	3158
TscAI	CASTG	7 cut(s)	363, 1879, 2137, 2247, 2791, 2863, 3013
TseFI	GTSAC	6 cut(s)	880, 898, 1155, 1987, 2754, 2811
TseI	GCWGC	6 cut(s)	1639, 1651, 2144, 2495, 3152, 3317
Tsp45I	GTSAC	6 cut(s)	880, 898, 1155, 1987, 2754, 2811
TspGWI	ACGGA	1 cut(s)	743
TspRI	CASTG	7 cut(s)	363, 1879, 2137, 2247, 2791, 2863, 3013
Tth111I	GACNNNGTC	1 cut(s)	3533
Van91I	CCANNNNNTGG	1 cut(s)	1964
Vha464I	CTTAAG	1 cut(s)	821
VpaK11BI	GGWCC	5 cut(s)	454, 617, 1877, 1920, 2371
XapI	RAATTY	4 cut(s)	721, 906, 1431, 3578
XbaI	TCTAGA	2 cut(s)	346, 968
XceI	RCATGY	2 cut(s)	1142, 3053
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2137
XhoI	CTCGAG	1 cut(s)	767
XmiI	GTMKAC	1 cut(s)	1114
XmnI	GAANNNNTTC	3 cut(s)	58, 2678, 3309
XspI	CTAG	6 cut(s)	347, 948, 969, 1073, 1470, 1643
Zsp2I	ATGCAT	1 cut(s)	2770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.