Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0007275

Physical Location & Seq

Genomic Coordinates Reverse (-)

38739150 .. 38745418

Gene Structure 6269 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG286200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3555 bp

ATGAAGCCGAAGAACACCGCCACAGAAACCAGCGGCGAGTCCCGATTCTTGGGAACCATCTCCGCTTCATCGATTCGAAACCTCCTCCCCAGATCCATCTCAACCAAGCACGGCAAATCCTTCTTCAGCCACAAAGTCGCCACGCCAAATGCCGAAAACACCCCTCCTCCTAACCCTAACATCCAACCCGGCGGCGACGAATCTGATTTCGCTACCAAGCCCCTACCAGTGCCGTCCGATTTGCCCAAATCTCCGACCGCCGCCGCTCAGAACATTCCGGCGAAGAGTGAGATTGATGGATCTGACGAAATCCAGGCACCTTCGGACCCTGCAGTGAAGGTTGTGGTGAGAATTAGACCTACTAAAGGAGGAGACTGGACTGTTAACAAGGTTTCTCCCAATACAGTGTCGGTTGGGGACCGTGAATTTGAGTTTGATTCGGTTTTTGATTCGAAATCCGATCAGGAAGATGTTTTTCAGACAGTTGGTGTGCCCTTGGTTAAAAATGCCTTAACCGGTTACAACACTTCGATTTTGTCATATGGACAGAGTGGTAGCGGGAAGACATACACGCTGTGGGGTCCGCCAAGCGCCATGGTTGTGGATTCATCTCCTGATAGTTGCCAGGGCATTGTTCCTCGTATGTTCCAAATGTTGTTCTCGGAGATAGAGAAAGAGCAAGAGAACTCAGAAGGGAAACAGTTTAATTACCAGTTCCGTTGCTCTTTTCTTGAGGTATATAATGAACAAATAGGAGATCTACTTGATCCAACCATGCGGAACCTTGAGATAAAAGATGATCCCAAAAATGGATTGTACGTTGAGAATCTGACAGAGGAGTACGTGACTAGCTATGAGGATGTGACACAACTTCTGATTAAGGGGCTTTCAAGTAGAAAAGTTGGAGCAACTAGCACAAACTCTAAGAGCTCTAGGTCCCATATTGTTTGTACCTTCATCATCGAGTCATGGTGCAAGGAGACCTCATCCAAGTGTTTTGGTAGTTCAAAAACAAGCAGAATGAGCTTTGTTGATCTTGCTGGTTTGGATAGGAATAAAGACGAGGATGCAGGTAGACAATGTGCAAGGGAAGGCAAATATGTAAAGAAGTCCTTGTCGCGACTTGGGCTTTTGGTAAATGCTCTGGCTAAAGTGCATCATTCGGGAAAATCTGAAGATGTGCCATACAAGTCTTCTTGCTTAACACATTTACTTCGGGAATCACTTGGTGGCAACTCAAAACTAACAGTCATCTGCGCTGTTGCCCCAGATAACAACAATCACGGTGAGATACTGCAAACACTAAGATTCGGAGAACGAGTGAAATCTATCAGGAACCACCCAGTAATAAATGAAATAACCGAGGATGCTGTTAATGATTTGAGTGATCAGATTCGTCAGTTGAAGGATGAACTTATAAAAGCGAAGTCTACCTCAGAAGGTGGTAGGAATGGATGTTTTGAAGGGAAAAATGTACGTGAAAGCTTGAATCAGTTACGAGTTAGCCTGAATCGCTCTTTCTTACCTCGCATAGAGGATGATTCTGATGAAGAGGTATATGTGGATGAGGAGGATGTAAGGGAATTAGGTCAGCAGCTAGATAAGCTGCATAGTTCGTGTGAGGAGAATATAGGAGACGGGATGGACTTGATGAGTGAAGATGATGACTTCCATTCCTCAGAAGAAAAAGAAACAGAGGAATTTGAAGAAGTTAATATGGAAGAATCTCAGGATGAACTTCCTCCTAACACTAACTCAGAGGCTATTAATCCAGCAGCTAGAAGTAGTGGCATCTCTATTAGCTTATGCAGTCGGTCTCCCATCCTTCAAGAACCTACATTGACAGAGTCTCCAAAAATTGGAAATACACAACGGAAAAGTGTCACTTTTGCATCAAGTTGTTCAGTCAGTCAGAACAAGGTACCAGACAATTCCAAGTTTAAGTCGGATGTGGTGAGAGAGTCCCTTGAAAACATCCAATCCTCTTTGCGGTCAAGCAGGAATTTTTCTGGTCCCACCGAGTCATTAGCTGCCAGCCTTCAGAGGGGCCTAAAGTTAATTGACTATCATCAGCAGAACTCTTCATTGAACAAATCTACAGTCTCCTTCTCCTTCGAGCACTTGGCACTGAAACCTTCTTCAGCTCAGACATTACCAGAAACAAGACCATCCATAGATGAGCCTTCTGTTTCTTTCCTTTGTGCATCTTGCAAAAGAAGAGTGCCTGAAGATGGTTCCAATGGGGGCCAGGACAGTGTGAAGACACTGACTATAGCAGTTGATGAAGCAGGGAATTCTAAGTCAATGAAAGAGGGTGCAGATGATGTAATGAAACAACCTACAAAGAGGGAGGAGCTTGAGAATCGTTGCATGGAGCAAGCAGCTAAAATTGAGCAGTTAAATCAATTGGTAACTTTTTCTTTTCTTTGGTTTTGGACCTCAATGATTTTCTTCTCCATATTTTGGGTCTTACATGAACGAGAATCTGATTTCCAGGTAGAGCAATACAAACGTGAGAAATGTAGTTCAGTTGCAGGGTATGGTAAAGAAATGATACCATATGAGGAGGAGGAATGTGAGATAAAAGAAGTTCATAATGAGTTGGATCTTGGGTATGGGACTGCAAATTTTGATCAGAATGAGAAGGAAGCACTTCTTAAGGAAGTTCAGGCGCTAAGAAGCAAGTTGCAGTTACAAAATGATCCATCTGCCAGAAGGTCTACTGACAAACTGAGATCCTCCTTATTGTCAAGATCTATCCAACTACGAAAAAGCGGTTCATATCGAGATTTCAGTGGGGAAGAACTAGAGAAGGAAAGACAGAGATGGACAGAAATGGAGAGTGACTGGATTTCCTTAACTGATGACTTGAGAATAGATCTTGAGTCCATCCGCCGGAGAGCAGAGAAGGTGGAGATGGAACTGAACTTGGAGAAGAATCGCACAGAAGAGTTGGATGATGCCCTTCATAGATCTGTCCTTGGGCATGCTAGAATGGTGGAACACTATGTTGAACTACAAGAGAAGTATAATGAGTTGGGTGGAAAGCACCGTGCCATCATGGAAGGGATAGCAGAAGTGAAGAGGGCAGCAGCAAAGGCAGGACGAAAAGGTCGTGGATCTCGTTTCTCCAAATCCCTGGCAGCAGAGCTCTCTGTATTGAGAGTGGAAAGAGAGAGGGAGAGGGAACTTTTGAAGAAGGAGAACAAAAGTCTCAAGATTCAACTCAGGGATACTGCAGAAGCTGTTCATGCTGCTGGAGAACTCCTTGTTCGGCTTAGAGAAGCTGAACATGCTGCTTCAGTTGCGCAGGAGAACTTCATGAATGTGCATCAAGAAAATGAAATGTTGAAGAAGCAAGTGGAGAAGGTTAAAAGAAAGCACAAGATGGAGATGATCACCATGAAGCAGTACATGGCGGAGAGTAAACTGCCACAATCTGCTCTGCAACCAATGTACCAGGAGGACTCTGACATTCCACACAACAACACAATCGTAGATGATGATCAGGCATGGAGAGCAGAATTTGGAGCAATATATCAAGAGCATTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005873 GO:0005875 GO:0006810 GO:0006890 GO:0006928 GO:0007017 GO:0007018 GO:0007049 GO:0008150 GO:0008283 GO:0008574 GO:0009987 GO:0015630 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019882 GO:0019884 GO:0019886 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0051179 GO:0051234 GO:0097159 GO:1901363 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1184

Amino Acids

133.07

Weight (kDa)

5.34

Isoelectric Point (pI)

53.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	130 - 444	5.7e-91	Kinesin motor domain
Microtub_bd	PF16796	131 - 255	2.1e-21	Microtubule binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20150 AT3G20150 AT4G26660 AT5G55520 AT5G55520
fragaria_vesca	FvH4_3g23930 FvH4_3g23930 FvH4_3g23930
malus_domestica	MD03G1189700.v1.1 MD11G1206000.v1.1
prunus_persica	Prupe.4G231600_v2.0.a1
pyrus_communis	pycom03g14250 pycom03g14260 pycom11g17870
rosa_chinensis	RchiOBHm_Chr5g0042431
rosa_laevigata	RLG00000034123
rosa_multiflora	Rmu_sc0002779.1_g000010 Rmu_sc0003219.1_g000025
rosa_roxburghii	Rroxscaffold_1G00038280
rosa_rugosa	Rorug05G0200000
rosa_samantha	Rh5AG286200 Rh5BG290900 Rh5CG322900 Rh5DG300600
rosa_wichuraiana	Rw5G026560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1418
AasI	GACNNNNNNGTC	1 cut(s)	3111
Acc16I	TGCGCA	1 cut(s)	3309
Acc36I	ACCTGC	1 cut(s)	1061
Acc65I	GGTACC	1 cut(s)	1921
AccB1I	GGYRCC	2 cut(s)	316, 1921
AccB7I	CCANNNNNTGG	2 cut(s)	1859, 2463
AccBSI	CCGCTC	1 cut(s)	266
AccI	GTMKAC	3 cut(s)	1075, 1430, 2720
AccII	CGCG	1 cut(s)	1120
AclWI	GGATC	8 cut(s)	87, 307, 761, 794, 2613, 2696, 2730, 3127
AcsI	RAATTY	6 cut(s)	425, 1700, 2002, 2293, 2626, 3524
AcuI	CTGAAG	6 cut(s)	109, 1194, 2024, 2124, 2247, 3285
AdeI	CACNNNGTG	2 cut(s)	576, 1229
AfaI	GTAC	7 cut(s)	818, 842, 952, 1476, 1923, 3413, 3458
AfiI	CCNNNNNNNGG	9 cut(s)	49, 365, 809, 1859, 1989, 2044, 2231, 2463, 2895
AflII	CTTAAG	1 cut(s)	2657
AgeI	ACCGGT	1 cut(s)	515
AjnI	CCWGG	6 cut(s)	312, 624, 2247, 2493, 3138, 3459
Alw21I	GWGCWC	3 cut(s)	932, 2121, 3153
Alw26I	GTCTC	7 cut(s)	366, 974, 1629, 1821, 1854, 2107, 3218
AlwI	GGATC	8 cut(s)	87, 307, 761, 794, 2613, 2696, 2730, 3127
AlwNI	CAGNNNCTG	1 cut(s)	3245
AoxI	GGCC	2 cut(s)	2047, 2245
ApoI	RAATTY	6 cut(s)	425, 1700, 2002, 2293, 2626, 3524
ArsI	GACNNNNNNTTYG	4 cut(s)	410, 442, 2085, 2117
AseI	ATTAAT	1 cut(s)	1767
AsiGI	ACCGGT	1 cut(s)	515
Asp700I	GAANNNNTTC	2 cut(s)	2652, 3246
Asp718I	GGTACC	1 cut(s)	1921
AspLEI	GCGC	4 cut(s)	593, 1259, 2674, 3310
AspS9I	GGNCC	8 cut(s)	325, 418, 581, 936, 2012, 2047, 2245, 2436
AsuC2I	CCSGG	1 cut(s)	189
AsuHPI	GGTGA	4 cut(s)	358, 1298, 1966, 3391
AsuII	TTCGAA	2 cut(s)	76, 452
AvaII	GGWCC	6 cut(s)	325, 418, 581, 936, 2012, 2436
BaeGI	GKGCMC	1 cut(s)	495
BaeI	ACNNNNGTAYC	2 cut(s)	3440, 3473
BanI	GGYRCC	2 cut(s)	316, 1921
BanII	GRGCYC	2 cut(s)	932, 3153
BbsI	GAAGAC	3 cut(s)	569, 1185, 2267
Bbv12I	GWGCWC	3 cut(s)	932, 2121, 3153
BceAI	ACGGC	2 cut(s)	127, 217
BciT130I	CCWGG	6 cut(s)	314, 626, 2249, 2495, 3140, 3461
BciVI	GTATCC	1 cut(s)	3226
BclI	TGATCA	4 cut(s)	1387, 2632, 3396, 3505
BcnI	CCSGG	1 cut(s)	189
BcoDI	GTCTC	7 cut(s)	366, 974, 1629, 1821, 1854, 2107, 3218
BfaI	CTAG	7 cut(s)	849, 912, 933, 1598, 1779, 2807, 2991
BfmI	CTRYAG	4 cut(s)	330, 2097, 2271, 3237
BfoI	RGCGCY	2 cut(s)	594, 2675
BfrI	CTTAAG	1 cut(s)	2657
BfuAI	ACCTGC	1 cut(s)	1061
BfuI	GTATCC	1 cut(s)	3226
BglII	AGATCT	4 cut(s)	757, 2753, 2878, 2972
Bme1390I	CCNGG	7 cut(s)	189, 314, 626, 2249, 2495, 3140, 3461
Bme18I	GGWCC	6 cut(s)	325, 418, 581, 936, 2012, 2436
BmgT120I	GGNCC	8 cut(s)	325, 418, 581, 936, 2012, 2047, 2245, 2436
BmrFI	CCNGG	7 cut(s)	189, 314, 626, 2249, 2495, 3140, 3461
BmrI	ACTGGG	1 cut(s)	1337
BmsI	GCATC	8 cut(s)	1057, 1165, 1357, 1800, 1901, 2213, 2950, 3340
BmuI	ACTGGG	1 cut(s)	1337
BpiI	GAAGAC	3 cut(s)	569, 1185, 2267
BpmI	CTGGAG	1 cut(s)	3279
Bpu14I	TTCGAA	2 cut(s)	76, 452
BpuEI	CTTGAG	6 cut(s)	752, 806, 2378, 2890, 2903, 3200
BpuMI	CCSGG	1 cut(s)	189
Bsa29I	ATCGAT	1 cut(s)	71
BsaAI	YACGTR	2 cut(s)	844, 1478
BsaBI	GATNNNNATC	1 cut(s)	3504
BsaI	GGTCTC	2 cut(s)	974, 1821
BsaJI	CCNNGG	6 cut(s)	495, 594, 625, 1362, 2980, 3138
BsaWI	WCCGGW	1 cut(s)	515
BsaXI	ACNNNNNCTCC	6 cut(s)	151, 181, 1305, 1335, 1834, 1864
Bsc4I	CCNNNNNNNGG	9 cut(s)	49, 365, 809, 1859, 1989, 2044, 2231, 2463, 2895
Bse118I	RCCGGY	1 cut(s)	515
Bse1I	ACTGG	5 cut(s)	227, 380, 712, 1343, 2852
Bse8I	GATNNNNATC	1 cut(s)	3504
BseBI	CCWGG	6 cut(s)	314, 626, 2249, 2495, 3140, 3461
BseCI	ATCGAT	1 cut(s)	71
BseDI	CCNNGG	6 cut(s)	495, 594, 625, 1362, 2980, 3138
BseJI	GATNNNNATC	1 cut(s)	3504
BseLI	CCNNNNNNNGG	9 cut(s)	49, 365, 809, 1859, 1989, 2044, 2231, 2463, 2895
BseMII	CTCAG	9 cut(s)	281, 702, 1449, 1692, 1742, 1770, 2159, 2723, 3241
BseNI	ACTGG	5 cut(s)	227, 380, 712, 1343, 2852
BseRI	GAGGAG	9 cut(s)	74, 156, 384, 851, 1583, 1637, 2366, 2579, 2582
BseSI	GKGCMC	1 cut(s)	495
BsgI	GTGCAG	1 cut(s)	2337
Bsh1236I	CGCG	1 cut(s)	1120
Bsh1285I	CGRYCG	1 cut(s)	258
BshFI	GGCC	2 cut(s)	2049, 2247
BshNI	GGYRCC	2 cut(s)	316, 1921
BshTI	ACCGGT	1 cut(s)	515
BshVI	ATCGAT	1 cut(s)	71
BsiEI	CGRYCG	1 cut(s)	258
BsiHKAI	GWGCWC	3 cut(s)	932, 2121, 3153
BsiSI	CCGG	4 cut(s)	189, 278, 516, 2896
BslFI	GGGAC	6 cut(s)	25, 431, 922, 1948, 1998, 2632
BslI	CCNNNNNNNGG	9 cut(s)	49, 365, 809, 1859, 1989, 2044, 2231, 2463, 2895
BsmAI	GTCTC	7 cut(s)	366, 974, 1629, 1821, 1854, 2107, 3218
BsmBI	CGTCTC	1 cut(s)	1629
BsmFI	GGGAC	6 cut(s)	25, 431, 922, 1948, 1998, 2632
BsnI	GGCC	2 cut(s)	2049, 2247
Bso31I	GGTCTC	2 cut(s)	974, 1821
Bsp119I	TTCGAA	2 cut(s)	76, 452
Bsp1286I	GDGCHC	4 cut(s)	495, 932, 2121, 3153
Bsp19I	CCATGG	1 cut(s)	594
Bsp68I	TCGCGA	1 cut(s)	1120
BspANI	GGCC	2 cut(s)	2049, 2247
BspCNI	CTCAG	9 cut(s)	280, 701, 1448, 1691, 1741, 1769, 2158, 2724, 3240
BspDI	ATCGAT	1 cut(s)	71
BspFNI	CGCG	1 cut(s)	1120
BspHI	TCATGA	1 cut(s)	3321
BspMAI	CTGCAG	2 cut(s)	334, 3241
BspMI	ACCTGC	1 cut(s)	1061
BspPI	GGATC	8 cut(s)	87, 307, 761, 794, 2613, 2696, 2730, 3127
BspT104I	TTCGAA	2 cut(s)	76, 452
BspT107I	GGYRCC	2 cut(s)	316, 1921
BspTI	CTTAAG	1 cut(s)	2657
BspTNI	GGTCTC	2 cut(s)	974, 1821
BsrBI	CCGCTC	1 cut(s)	266
BsrFI	RCCGGY	1 cut(s)	515
BsrI	ACTGG	5 cut(s)	227, 380, 712, 1343, 2852
BssAI	RCCGGY	1 cut(s)	515
BssECI	CCNNGG	6 cut(s)	495, 594, 625, 1362, 2980, 3138
BssT1I	CCWWGG	3 cut(s)	495, 594, 2980
Bst2UI	CCWGG	6 cut(s)	314, 626, 2249, 2495, 3140, 3461
Bst6I	CTCTTC	6 cut(s)	278, 1545, 2086, 2212, 2943, 3077
BstAFI	CTTAAG	1 cut(s)	2657
BstBAI	YACGTR	2 cut(s)	844, 1478
BstBI	TTCGAA	2 cut(s)	76, 452
BstC8I	GCNNGC	3 cut(s)	2035, 2379, 2988
BstDSI	CCRYGG	1 cut(s)	594
BstENI	CCTNNNNNAGG	1 cut(s)	363
BstFNI	CGCG	1 cut(s)	1120
BstH2I	RGCGCY	2 cut(s)	594, 2675
BstHHI	GCGC	4 cut(s)	593, 1259, 2674, 3310
BstMAI	GTCTC	7 cut(s)	366, 974, 1629, 1821, 1854, 2107, 3218
BstMCI	CGRYCG	1 cut(s)	258
BstMWI	GCNNNNNNNGC	9 cut(s)	1023, 1126, 1512, 1603, 3098, 3251, 3293, 3305, 3518
BstNI	CCWGG	6 cut(s)	314, 626, 2249, 2495, 3140, 3461
BstNSI	RCATGY	2 cut(s)	2990, 3296
BstSCI	CCNGG	7 cut(s)	187, 312, 624, 2247, 2493, 3138, 3459
BstSFI	CTRYAG	4 cut(s)	330, 2097, 2271, 3237
BstSLI	GKGCMC	1 cut(s)	495
BstUI	CGCG	1 cut(s)	1120
BstV2I	GAAGAC	3 cut(s)	569, 1185, 2267
BstX2I	RGATCY	9 cut(s)	92, 299, 757, 2605, 2735, 2753, 2878, 2972, 3119
BstXI	CCANNNNNNTGG	2 cut(s)	601, 3139
BstYI	RGATCY	9 cut(s)	92, 299, 757, 2605, 2735, 2753, 2878, 2972, 3119
Bsu15I	ATCGAT	1 cut(s)	71
BsuI	GTATCC	1 cut(s)	3226
BsuRI	GGCC	2 cut(s)	2049, 2247
BsuTUI	ATCGAT	1 cut(s)	71
BtgI	CCRYGG	1 cut(s)	594
BtsI	GCAGTG	1 cut(s)	339
BtsIMutI	CAGTG	7 cut(s)	234, 339, 411, 2126, 2260, 2264, 2800
BtuMI	TCGCGA	1 cut(s)	1120
BveI	ACCTGC	1 cut(s)	1061
Cac8I	GCNNGC	3 cut(s)	2035, 2379, 2988
CaiI	CAGNNNCTG	1 cut(s)	3245
CciI	TCATGA	1 cut(s)	3321
CfoI	GCGC	4 cut(s)	593, 1259, 2674, 3310
Cfr10I	RCCGGY	1 cut(s)	515
Cfr13I	GGNCC	8 cut(s)	325, 418, 581, 936, 2012, 2047, 2245, 2436
ClaI	ATCGAT	1 cut(s)	71
Csp6I	GTAC	7 cut(s)	817, 841, 951, 1475, 1922, 3412, 3457
CspAI	ACCGGT	1 cut(s)	515
CviQI	GTAC	7 cut(s)	817, 841, 951, 1475, 1922, 3412, 3457
DraIII	CACNNNGTG	2 cut(s)	576, 1229
DrdI	GACNNNNNNGTC	1 cut(s)	3111
DseDI	GACNNNNNNGTC	1 cut(s)	3111
Eam1104I	CTCTTC	6 cut(s)	278, 1545, 2086, 2212, 2943, 3077
EarI	CTCTTC	6 cut(s)	278, 1545, 2086, 2212, 2943, 3077
EciI	GGCGGA	3 cut(s)	573, 2882, 3434
Ecl136II	GAGCTC	2 cut(s)	930, 3151
Eco130I	CCWWGG	3 cut(s)	495, 594, 2980
Eco24I	GRGCYC	2 cut(s)	932, 3153
Eco31I	GGTCTC	2 cut(s)	974, 1821
Eco47I	GGWCC	6 cut(s)	325, 418, 581, 936, 2012, 2436
Eco53kI	GAGCTC	2 cut(s)	930, 3151
Eco57I	CTGAAG	6 cut(s)	109, 1194, 2024, 2124, 2247, 3285
EcoICRI	GAGCTC	2 cut(s)	930, 3151
EcoNI	CCTNNNNNAGG	1 cut(s)	363
EcoO109I	RGGNCCY	2 cut(s)	936, 2047
EcoRI	GAATTC	1 cut(s)	2293
EcoRII	CCWGG	6 cut(s)	312, 624, 2247, 2493, 3138, 3459
EcoT14I	CCWWGG	3 cut(s)	495, 594, 2980
EcoT38I	GRGCYC	2 cut(s)	932, 3153
ErhI	CCWWGG	3 cut(s)	495, 594, 2980
Esp3I	CGTCTC	1 cut(s)	1629
FalI	AAGNNNNNCTT	6 cut(s)	1097, 1129, 1870, 1902, 2640, 2672
FaqI	GGGAC	6 cut(s)	25, 431, 922, 1948, 1998, 2632
FauI	CCCGC	1 cut(s)	551
FauNDI	CATATG	2 cut(s)	541, 2560
FbaI	TGATCA	4 cut(s)	1387, 2632, 3396, 3505
FblI	GTMKAC	3 cut(s)	1075, 1430, 2720
FriOI	GRGCYC	2 cut(s)	932, 3153
FspBI	CTAG	7 cut(s)	849, 912, 933, 1598, 1779, 2807, 2991
FspI	TGCGCA	1 cut(s)	3309
GlaI	GCGC	4 cut(s)	592, 1258, 2673, 3309
GsuI	CTGGAG	1 cut(s)	3279
HaeII	RGCGCY	2 cut(s)	594, 2675
HaeIII	GGCC	2 cut(s)	2049, 2247
HapII	CCGG	4 cut(s)	189, 278, 516, 2896
HhaI	GCGC	4 cut(s)	593, 1259, 2674, 3310
Hin6I	GCGC	4 cut(s)	591, 1257, 2672, 3308
HinP1I	GCGC	4 cut(s)	591, 1257, 2672, 3308
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HindIII	AAGCTT	1 cut(s)	1483
HpaI	GTTAAC	1 cut(s)	385
HpaII	CCGG	4 cut(s)	189, 278, 516, 2896
HphI	GGTGA	4 cut(s)	358, 1298, 1966, 3391
Hpy166II	GTNNAC	5 cut(s)	385, 1076, 1431, 2721, 3428
Hpy8I	GTNNAC	5 cut(s)	385, 1076, 1431, 2721, 3428
Hpy99I	CGWCG	1 cut(s)	200
HpyCH4IV	ACGT	4 cut(s)	819, 843, 1477, 2512
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1023, 1126, 1512, 1603, 3098, 3251, 3293, 3305, 3518
HpySE526I	ACGT	4 cut(s)	819, 843, 1477, 2512
HspAI	GCGC	4 cut(s)	591, 1257, 2672, 3308
KpnI	GGTACC	1 cut(s)	1925
Ksp22I	TGATCA	4 cut(s)	1387, 2632, 3396, 3505
KspAI	GTTAAC	1 cut(s)	385
LmnI	GCTCC	4 cut(s)	905, 2353, 2374, 3530
LweI	GCATC	8 cut(s)	1057, 1165, 1357, 1800, 1901, 2213, 2950, 3340
MaeI	CTAG	7 cut(s)	849, 912, 933, 1598, 1779, 2807, 2991
MaeII	ACGT	4 cut(s)	819, 843, 1477, 2512
MaeIII	GTNAC	8 cut(s)	518, 844, 862, 1494, 1882, 2410, 2691, 2843
MbiI	CCGCTC	1 cut(s)	266
MfeI	CAATTG	1 cut(s)	2405
MflI	RGATCY	9 cut(s)	92, 299, 757, 2605, 2735, 2753, 2878, 2972, 3119
MhlI	GDGCHC	4 cut(s)	495, 932, 2121, 3153
MlyI	GAGTC	7 cut(s)	47, 974, 1856, 1970, 2030, 2894, 3461
MmeI	TCCRAC	8 cut(s)	208, 278, 794, 883, 1926, 2583, 2785, 2934
MroXI	GAANNNNTTC	2 cut(s)	2652, 3246
MslI	CAYNNNNRTG	3 cut(s)	599, 991, 3326
MspA1I	CMGCKG	1 cut(s)	33
MspCI	CTTAAG	1 cut(s)	2657
MspI	CCGG	4 cut(s)	189, 278, 516, 2896
MspR9I	CCNGG	7 cut(s)	189, 314, 626, 2249, 2495, 3140, 3461
MunI	CAATTG	1 cut(s)	2405
MvaI	CCWGG	6 cut(s)	314, 626, 2249, 2495, 3140, 3461
MvnI	CGCG	1 cut(s)	1120
MwoI	GCNNNNNNNGC	9 cut(s)	1023, 1126, 1512, 1603, 3098, 3251, 3293, 3305, 3518
NciI	CCSGG	1 cut(s)	189
NcoI	CCATGG	1 cut(s)	594
NdeI	CATATG	2 cut(s)	541, 2560
NmuCI	GTSAC	4 cut(s)	844, 862, 1882, 2843
NruI	TCGCGA	1 cut(s)	1120
NsbI	TGCGCA	1 cut(s)	3309
NspI	RCATGY	2 cut(s)	2990, 3296
NspV	TTCGAA	2 cut(s)	76, 452
PaeI	GCATGC	1 cut(s)	2990
PagI	TCATGA	1 cut(s)	3321
PcsI	WCGNNNNNNNCGW	2 cut(s)	3112, 3121
PdmI	GAANNNNTTC	2 cut(s)	2652, 3246
PflFI	GACNNNGTC	1 cut(s)	1846
PflMI	CCANNNNNTGG	2 cut(s)	1859, 2463
PinAI	ACCGGT	1 cut(s)	515
PleI	GAGTC	7 cut(s)	46, 973, 1855, 1969, 2029, 2893, 3461
PpsI	GAGTC	7 cut(s)	46, 973, 1855, 1969, 2029, 2893, 3461
Ppu21I	YACGTR	2 cut(s)	844, 1478
PpuMI	RGGWCCY	1 cut(s)	936
PshBI	ATTAAT	1 cut(s)	1767
PsiI	TTATAA	1 cut(s)	1418
Psp124BI	GAGCTC	2 cut(s)	932, 3153
Psp5II	RGGWCCY	1 cut(s)	936
Psp6I	CCWGG	6 cut(s)	312, 624, 2247, 2493, 3138, 3459
PspGI	CCWGG	6 cut(s)	312, 624, 2247, 2493, 3138, 3459
PspPI	GGNCC	8 cut(s)	325, 418, 581, 936, 2012, 2047, 2245, 2436
PspPPI	RGGWCCY	1 cut(s)	936
PstI	CTGCAG	2 cut(s)	334, 3241
PstNI	CAGNNNCTG	1 cut(s)	3245
PsuI	RGATCY	9 cut(s)	92, 299, 757, 2605, 2735, 2753, 2878, 2972, 3119
PsyI	GACNNNGTC	1 cut(s)	1846
RruI	TCGCGA	1 cut(s)	1120
RsaI	GTAC	7 cut(s)	818, 842, 952, 1476, 1923, 3413, 3458
RsaNI	GTAC	7 cut(s)	817, 841, 951, 1475, 1922, 3412, 3457
RseI	CAYNNNNRTG	3 cut(s)	599, 991, 3326
SacI	GAGCTC	2 cut(s)	932, 3153
Sau96I	GGNCC	8 cut(s)	325, 418, 581, 936, 2012, 2047, 2245, 2436
SchI	GAGTC	7 cut(s)	47, 974, 1856, 1970, 2030, 2894, 3461
ScrFI	CCNGG	7 cut(s)	189, 314, 626, 2249, 2495, 3140, 3461
SduI	GDGCHC	4 cut(s)	495, 932, 2121, 3153
SfaNI	GCATC	8 cut(s)	1057, 1165, 1357, 1800, 1901, 2213, 2950, 3340
SfcI	CTRYAG	4 cut(s)	330, 2097, 2271, 3237
SfuI	TTCGAA	2 cut(s)	76, 452
SinI	GGWCC	6 cut(s)	325, 418, 581, 936, 2012, 2436
SmiMI	CAYNNNNRTG	3 cut(s)	599, 991, 3326
SmlI	CTYRAG	7 cut(s)	731, 785, 2357, 2657, 2869, 2882, 3215
SmoI	CTYRAG	7 cut(s)	731, 785, 2357, 2657, 2869, 2882, 3215
SphI	GCATGC	1 cut(s)	2990
SspMI	CTAG	7 cut(s)	849, 912, 933, 1598, 1779, 2807, 2991
SstI	GAGCTC	2 cut(s)	932, 3153
StyD4I	CCNGG	7 cut(s)	187, 312, 624, 2247, 2493, 3138, 3459
StyI	CCWWGG	3 cut(s)	495, 594, 2980
TaiI	ACGT	4 cut(s)	822, 846, 1480, 2515
TaqI	TCGA	7 cut(s)	71, 76, 452, 530, 963, 2115, 2785
TaqII	GACCGA	1 cut(s)	1803
TatI	WGTACW	1 cut(s)	3411
TauI	GCSGC	4 cut(s)	36, 195, 263, 266
TscAI	CASTG	7 cut(s)	234, 339, 411, 2133, 2260, 2271, 2800
TseFI	GTSAC	4 cut(s)	844, 862, 1882, 2843
Tsp45I	GTSAC	4 cut(s)	844, 862, 1882, 2843
TspGWI	ACGGA	2 cut(s)	707, 1888
TspRI	CASTG	7 cut(s)	234, 339, 411, 2133, 2260, 2271, 2800
Tth111I	GACNNNGTC	1 cut(s)	1846
Van91I	CCANNNNNTGG	2 cut(s)	1859, 2463
Vha464I	CTTAAG	1 cut(s)	2657
VpaK11BI	GGWCC	6 cut(s)	325, 418, 581, 936, 2012, 2436
VspI	ATTAAT	1 cut(s)	1767
XagI	CCTNNNNNAGG	1 cut(s)	363
XapI	RAATTY	6 cut(s)	425, 1700, 2002, 2293, 2626, 3524
XceI	RCATGY	2 cut(s)	2990, 3296
XmiI	GTMKAC	3 cut(s)	1075, 1430, 2720
XmnI	GAANNNNTTC	2 cut(s)	2652, 3246
XspI	CTAG	7 cut(s)	849, 912, 933, 1598, 1779, 2807, 2991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.