Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007275

Physical Location & Seq

Genomic Coordinates Forward (+)

55709604 .. 55715638

Gene Structure 6035 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00038280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3405 bp

ATGAAGCCGAAGAACACCGCCACAGAAACCACCGGCGAGTCCCGATTCCTGGGAACCATCTCCGCTTCCTCCATTCGAAACCTCCTCCCCAGATCCATCTCAACCAAGCACGGCAAATCCTTCTTCAGCCACAAAATCACCACGCCAAATGCCGAAAATACCCCTCCTCCTAACCCTAACATCCAACCCGCCGAAGACGAATCTGCTTTTGCTGCCAAGCCACCACTACCAGTACCTTCCGATTTGCCCAAATCTCCGACCTCCGCCGCTCCTCAGAACATTCCGGCAAAGAGTGAGATTGATGGATCTGACGAAATCCAGGCTCCTTCGGACCCTGCAGTGAAGGTTGTGGTGAGAATTAGACCTACTAAAGGAGGAGACTGGACTGTCAACAAGGTTTCTCCCAATACAGTGTCGGTTGGGGACCGTGAATTTGAGTTTGATTCGGTTTTTGATTCGAAATCCGATCAGGAAGATGTTTTTCAGACAGTAGGTGTGCCCTTGGTTAAAAATGCCTTAGCTGGTTACAACACTTCGATTTTGTCATATGGACAGAGTGGTAGCGGGAAGACATACACGCTGTGGGGTCCGCCAAGCGCCATGGTTGTGGATTCATCTCCTGATAGTTGCCAGGGCATTGTTCCTCGTATGTTCCAAATGTTGTTCTCGGAGATAGAGAAAGAGCAAGAGAACTCTGAAGGGAAACAGTTTAATTACCAGTTCCGTTGCTCTTTTCTTGAGGTATATAATGAACAAATAGGAGATTTACTTGATCCAACCATGCGGAACCTTGAGATCAAAGATGATCCCAAAAATGGATTGTACGTTGAGAATCTGACAGAGGAGTATGTGAGTAGCTATGAGGATGTGACACAACTTCTGATTAAGGGGCTTTCAAGTAGAAAAGTTGGAGCAACTAGCACAAACTCTAAGAGCTCTAGGTCCCATATTGTTTGTACCTTCATCATCGAGTCATGGTGCAAGGAGACCTCATCCAAGTGTTTTGGTAGTTCAAAAACAAGCAGAATGAGCTTTGTTGATCTTGCTGGTTTGGATAGGAATAAAGATGAGGATGCAGGTAGACAATGTGCAAGGGAAGGCAAATATGTAAAGAAGTCCTTGTCGCGACTTGGGCTTTTGGTAAATACTCTGGCTAAAGTGCATCACTCTGGAAAATCTGACGATGTGCCATACAAGTCTTCTTGCTTAACACATTTACTTCGGGAATCACTTGGTGGCAACTCAAAACTAACAGTCATCTGCGCTGTTGCCCCAGATAACAACAATCACGGTGAGATACTGCAAACACTAAGATTCGGAGAACGAGTGAAATCTATCAGGAACCAACCAGTAATAAATGAAATAACTGAGGATGCTGTTAATGATCTGAGTGATCAGATTCGTCAGTTGAAGGATGAACTTATAAAAGCGAAGTCTACCTCAGAAGGTGGTAGGAATGGATGTTTTGAAGGGAAAAATGTACGTGAAAGCTTGAATCAGTTACGAGTTAGCCTGAATCGCTCTTTCTTACCCCGCATAGAGGATGATTCTGATGAAGAGGTATATGTGGATGAGGAGGATGTAAGGGAATTAGGTCAGCAGCTAGATAAGCTGCATAGTTCGTGTGAGGAGAATATAGGAGACGGGATGGACTTGATGAGTGAAGATGATGACTTCCATTCCTCAGAAGAAAAAGAAACAGAGGAATTTGAAGAAGTTAATATGGAAGAATCTCAGGATGAACTTCCTCCTAACACTAACTCAGAGGCTATTAATCCAGCAACTAGAAGTAGTGGCATCTCTATTAGCTTATGCAGTCGGTCTCCCATCCTTCAAGAACCTACATTGACAGAGTCTCCAAAAATTGGAAATACACAACGGAAAAGTGTTACTTTTGCATCAAGTTGTTCAGTCAGTCAGAACAAGGTACCAGACAATTCCAAGTTTAAGTCGGATGTGGTGAGAGAGTCCCTTGAAAACATCCAATCCTCTTTGCGGTCAAGCAGGAATTTTTCTGGTCCCACCGAGTCATTAGCTGCCAGCCTTCAGAGGGGCCTAAAGTTAATTGACTATCATCAGCAGAACTCTTCATTGAACAAATCTACAGTCTCCTTCTCCTTCGAGCACTTGGCACTGAAACCTTCTTCAGCTCAGACATTACCAGAAACAAGACCATCCATAGATGAGCCTTCTGTTTCTTTCCTTTGTGCATCTTGCAAAAGAAGAGTGCCTGAAGATGGTACCAATGGGGGCCAGGACAGTGTGAAGACACTGACTATAGCAGTTGATGAAGCAGGGAATTCTAAGCCAATGAAAGAGGGTGCAGATGATGTAATGGAACAACAACCTACAACGAGGGAGGAGCTTGAGAATCGTTGCAAGGAGCAAGCAGCTAAAATTGAGCAGTTAAATCAATTGGAGGAATGTGAGATAAAAGAAGTTCATAATGAGTTGGATCTTGGGTATGGGACTGCAAATTTTGATCAGAATGAGAAGGAAGCACTTCTTAAGGAAGTTCAGGTGCTAAGAAGCAAGTTGCAGTTACAAAATGATCCATCTGCCAGAAGGTCTACTGACAAACTGAGATCCTCCTTATTGTCAAGATCTATCCAACTACGAAAAAGTGGTTCATATCGAGATTTCAGTGGGGAAGAACTAGAGAAGGAAAGACAGAGATGGACAGAAATGGAGAGTGACTGGATTTCCTTAACTGATGACTTGAGAATAGATCTTGAGTCCATCCGCCGGAGAGCAGAGAAGGTGGAGATGGAACTGAACTTGGAGAAGAATCGCACAGAAGAGTTGGATGATGCACTTCATAGATCTGTCCTTGGGCATGCTAGAATGGTGGAACACTATGTTGAACTACAAGAGAAGTATAATGAGTTGGGTGGAAAGCATCGTGCCATCATGGAAGGGATAGCAGAAGTGAAGAGGGCAGCAGCAAAGGCAGGACGAAAAGGTCGTGGATCTCGTTTCTCCAAATCCCTGGCAGCAGAGCTCTCTGTATTGAGAGTGGAAAGAGAGAGGGAGAGGGAACTTTTGAAGAAGGAGAACAAAAGTCTCAAGATTCAACTCAGGGATACTGCAGAAGCTGTTCATGCTGCTGGAGAACTCCTCGTTCGGCTTAGAGAAGCTGAACATGCTGCATCAGTTGCACAGGAGAACTTCATGAATGTGCATCAAGAAAATGAAATGTTGAAGAAGCAAGTGGAGAAGGTTAAAAGAAAGCACAAGATGGAGATGATCACCATGAAGCAGTACATGGCGGAGAGTAAATTGCCACAATCTGCTCTGCAACCAATGTACCGGGAGGACTCTGACATTCCACACAACAACACAACCATAGATGATGATCAGGCATGGAGAGCAGAATTTGGAGCAATATATCAAGAGCATTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005873 GO:0005875 GO:0006810 GO:0006890 GO:0006928 GO:0007017 GO:0007018 GO:0007049 GO:0008150 GO:0008283 GO:0008574 GO:0009987 GO:0015630 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019882 GO:0019884 GO:0019886 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0051179 GO:0051234 GO:0097159 GO:1901363 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1134

Amino Acids

127.0

Weight (kDa)

5.33

Isoelectric Point (pI)

54.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	133 - 446	1.5e-90	Kinesin motor domain
Microtub_bd	PF16796	133 - 257	2.3e-21	Microtubule binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20150 AT3G20150 AT4G26660 AT5G55520 AT5G55520
fragaria_vesca	FvH4_3g23930 FvH4_3g23930 FvH4_3g23930
malus_domestica	MD03G1189700.v1.1 MD11G1206000.v1.1
prunus_persica	Prupe.4G231600_v2.0.a1
pyrus_communis	pycom03g14250 pycom03g14260 pycom11g17870
rosa_chinensis	RchiOBHm_Chr5g0042431
rosa_laevigata	RLG00000034123
rosa_multiflora	Rmu_sc0002779.1_g000010 Rmu_sc0003219.1_g000025
rosa_roxburghii	Rroxscaffold_1G00038280
rosa_rugosa	Rorug05G0200000
rosa_samantha	Rh5AG286200 Rh5BG290900 Rh5CG322900 Rh5DG300600
rosa_wichuraiana	Rw5G026560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1424
AasI	GACNNNNNNGTC	2 cut(s)	386, 2961
Acc36I	ACCTGC	1 cut(s)	1067
Acc65I	GGTACC	2 cut(s)	1927, 2240
AccB1I	GGYRCC	2 cut(s)	1927, 2240
AccB7I	CCANNNNNTGG	1 cut(s)	1865
AccBSI	CCGCTC	1 cut(s)	269
AccI	GTMKAC	3 cut(s)	1081, 1436, 2570
AccII	CGCG	1 cut(s)	1126
AclWI	GGATC	8 cut(s)	87, 313, 767, 800, 2463, 2546, 2580, 2977
AcsI	RAATTY	6 cut(s)	431, 1706, 2008, 2299, 2476, 3374
AcuI	CTGAAG	5 cut(s)	109, 717, 2030, 2130, 2253
AdeI	CACNNNGTG	2 cut(s)	582, 1235
AfaI	GTAC	8 cut(s)	234, 824, 958, 1482, 1929, 2242, 3263, 3308
AfiI	CCNNNNNNNGG	9 cut(s)	49, 371, 815, 1540, 1865, 1995, 2050, 2237, 2745
AflII	CTTAAG	1 cut(s)	2507
AjnI	CCWGG	5 cut(s)	48, 318, 630, 2253, 2988
Alw21I	GWGCWC	3 cut(s)	938, 2127, 3003
Alw26I	GTCTC	7 cut(s)	372, 980, 1635, 1827, 1860, 2113, 3068
AlwI	GGATC	8 cut(s)	87, 313, 767, 800, 2463, 2546, 2580, 2977
AlwNI	CAGNNNCTG	1 cut(s)	3095
AoxI	GGCC	2 cut(s)	2053, 2251
ApoI	RAATTY	6 cut(s)	431, 1706, 2008, 2299, 2476, 3374
ArsI	GACNNNNNNTTYG	4 cut(s)	416, 448, 2091, 2123
AseI	ATTAAT	1 cut(s)	1773
Asp700I	GAANNNNTTC	2 cut(s)	2502, 3096
Asp718I	GGTACC	2 cut(s)	1927, 2240
AspLEI	GCGC	2 cut(s)	599, 1265
AspS9I	GGNCC	7 cut(s)	331, 424, 587, 942, 2018, 2053, 2251
AsuC2I	CCSGG	1 cut(s)	3311
AsuHPI	GGTGA	5 cut(s)	130, 364, 1304, 1972, 3241
AsuII	TTCGAA	2 cut(s)	76, 458
AvaII	GGWCC	5 cut(s)	331, 424, 587, 942, 2018
BaeGI	GKGCMC	1 cut(s)	501
BaeI	ACNNNNGTAYC	2 cut(s)	3290, 3323
BanI	GGYRCC	2 cut(s)	1927, 2240
BanII	GRGCYC	2 cut(s)	938, 3003
BbsI	GAAGAC	4 cut(s)	201, 575, 1191, 2273
Bbv12I	GWGCWC	3 cut(s)	938, 2127, 3003
BceAI	ACGGC	1 cut(s)	127
BciT130I	CCWGG	5 cut(s)	50, 320, 632, 2255, 2990
BciVI	GTATCC	1 cut(s)	3076
BclI	TGATCA	4 cut(s)	1393, 2482, 3246, 3355
BcnI	CCSGG	1 cut(s)	3311
BcoDI	GTCTC	7 cut(s)	372, 980, 1635, 1827, 1860, 2113, 3068
BfaI	CTAG	6 cut(s)	918, 939, 1604, 1785, 2657, 2841
BfmI	CTRYAG	4 cut(s)	336, 2103, 2277, 3087
BfoI	RGCGCY	1 cut(s)	600
BfrI	CTTAAG	1 cut(s)	2507
BfuAI	ACCTGC	1 cut(s)	1067
BfuI	GTATCC	1 cut(s)	3076
BglII	AGATCT	3 cut(s)	2603, 2728, 2822
Bme1390I	CCNGG	6 cut(s)	50, 320, 632, 2255, 2990, 3311
Bme18I	GGWCC	5 cut(s)	331, 424, 587, 942, 2018
BmgT120I	GGNCC	7 cut(s)	331, 424, 587, 942, 2018, 2053, 2251
BmrFI	CCNGG	6 cut(s)	50, 320, 632, 2255, 2990, 3311
BpiI	GAAGAC	4 cut(s)	201, 575, 1191, 2273
BplI	GAGNNNNNCTC	2 cut(s)	3102, 3134
BpmI	CTGGAG	1 cut(s)	3129
Bpu10I	CCTNAGC	1 cut(s)	517
Bpu14I	TTCGAA	2 cut(s)	76, 458
BpuEI	CTTGAG	6 cut(s)	758, 812, 2387, 2740, 2753, 3050
BpuMI	CCSGG	1 cut(s)	3311
BsaAI	YACGTR	1 cut(s)	1484
BsaBI	GATNNNNATC	1 cut(s)	3354
BsaI	GGTCTC	2 cut(s)	980, 1827
BsaJI	CCNNGG	6 cut(s)	49, 501, 600, 631, 2830, 2988
BsaXI	ACNNNNNCTCC	6 cut(s)	151, 181, 1311, 1341, 1840, 1870
Bsc4I	CCNNNNNNNGG	9 cut(s)	49, 371, 815, 1540, 1865, 1995, 2050, 2237, 2745
Bse118I	RCCGGY	1 cut(s)	32
Bse1I	ACTGG	5 cut(s)	230, 386, 718, 1349, 2702
Bse8I	GATNNNNATC	1 cut(s)	3354
BseBI	CCWGG	5 cut(s)	50, 320, 632, 2255, 2990
BseDI	CCNNGG	6 cut(s)	49, 501, 600, 631, 2830, 2988
BseJI	GATNNNNATC	1 cut(s)	3354
BseLI	CCNNNNNNNGG	9 cut(s)	49, 371, 815, 1540, 1865, 1995, 2050, 2237, 2745
BseNI	ACTGG	5 cut(s)	230, 386, 718, 1349, 2702
BseRI	GAGGAG	9 cut(s)	74, 156, 261, 390, 857, 1589, 1643, 2375, 3107
BseSI	GKGCMC	1 cut(s)	501
BsgI	GTGCAG	1 cut(s)	2343
Bsh1236I	CGCG	1 cut(s)	1126
BshFI	GGCC	2 cut(s)	2055, 2253
BshNI	GGYRCC	2 cut(s)	1927, 2240
BsiHKAI	GWGCWC	3 cut(s)	938, 2127, 3003
BsiSI	CCGG	4 cut(s)	33, 284, 2746, 3310
BslFI	GGGAC	6 cut(s)	25, 437, 928, 1954, 2004, 2482
BslI	CCNNNNNNNGG	9 cut(s)	49, 371, 815, 1540, 1865, 1995, 2050, 2237, 2745
BsmAI	GTCTC	7 cut(s)	372, 980, 1635, 1827, 1860, 2113, 3068
BsmBI	CGTCTC	1 cut(s)	1635
BsmFI	GGGAC	6 cut(s)	25, 437, 928, 1954, 2004, 2482
BsnI	GGCC	2 cut(s)	2055, 2253
Bso31I	GGTCTC	2 cut(s)	980, 1827
Bsp119I	TTCGAA	2 cut(s)	76, 458
Bsp1286I	GDGCHC	4 cut(s)	501, 938, 2127, 3003
Bsp19I	CCATGG	1 cut(s)	600
Bsp68I	TCGCGA	1 cut(s)	1126
BspANI	GGCC	2 cut(s)	2055, 2253
BspFNI	CGCG	1 cut(s)	1126
BspHI	TCATGA	1 cut(s)	3171
BspMAI	CTGCAG	2 cut(s)	340, 3091
BspMI	ACCTGC	1 cut(s)	1067
BspPI	GGATC	8 cut(s)	87, 313, 767, 800, 2463, 2546, 2580, 2977
BspT104I	TTCGAA	2 cut(s)	76, 458
BspT107I	GGYRCC	2 cut(s)	1927, 2240
BspTI	CTTAAG	1 cut(s)	2507
BspTNI	GGTCTC	2 cut(s)	980, 1827
BsrBI	CCGCTC	1 cut(s)	269
BsrFI	RCCGGY	1 cut(s)	32
BsrI	ACTGG	5 cut(s)	230, 386, 718, 1349, 2702
BssAI	RCCGGY	1 cut(s)	32
BssECI	CCNNGG	6 cut(s)	49, 501, 600, 631, 2830, 2988
BssT1I	CCWWGG	3 cut(s)	501, 600, 2830
Bst2UI	CCWGG	5 cut(s)	50, 320, 632, 2255, 2990
Bst4CI	ACNGT	9 cut(s)	388, 412, 428, 490, 708, 1255, 1292, 2107, 2261
Bst6I	CTCTTC	5 cut(s)	1551, 2092, 2218, 2793, 2927
BstAFI	CTTAAG	1 cut(s)	2507
BstAPI	GCANNNNNTGC	1 cut(s)	3155
BstBAI	YACGTR	1 cut(s)	1484
BstBI	TTCGAA	2 cut(s)	76, 458
BstC8I	GCNNGC	3 cut(s)	2041, 2388, 2838
BstDSI	CCRYGG	1 cut(s)	600
BstENI	CCTNNNNNAGG	1 cut(s)	369
BstFNI	CGCG	1 cut(s)	1126
BstH2I	RGCGCY	1 cut(s)	600
BstHHI	GCGC	2 cut(s)	599, 1265
BstMAI	GTCTC	7 cut(s)	372, 980, 1635, 1827, 1860, 2113, 3068
BstNI	CCWGG	5 cut(s)	50, 320, 632, 2255, 2990
BstNSI	RCATGY	2 cut(s)	2840, 3146
BstSCI	CCNGG	6 cut(s)	48, 318, 630, 2253, 2988, 3309
BstSFI	CTRYAG	4 cut(s)	336, 2103, 2277, 3087
BstSLI	GKGCMC	1 cut(s)	501
BstUI	CGCG	1 cut(s)	1126
BstV2I	GAAGAC	4 cut(s)	201, 575, 1191, 2273
BstX2I	RGATCY	8 cut(s)	92, 305, 2455, 2585, 2603, 2728, 2822, 2969
BstXI	CCANNNNNNTGG	2 cut(s)	607, 2989
BstYI	RGATCY	8 cut(s)	92, 305, 2455, 2585, 2603, 2728, 2822, 2969
BsuI	GTATCC	1 cut(s)	3076
BsuRI	GGCC	2 cut(s)	2055, 2253
BtgI	CCRYGG	1 cut(s)	600
BtsI	GCAGTG	1 cut(s)	345
BtsIMutI	CAGTG	6 cut(s)	345, 417, 2132, 2266, 2270, 2650
BtuMI	TCGCGA	1 cut(s)	1126
BveI	ACCTGC	1 cut(s)	1067
Cac8I	GCNNGC	3 cut(s)	2041, 2388, 2838
CaiI	CAGNNNCTG	1 cut(s)	3095
CciI	TCATGA	1 cut(s)	3171
CfoI	GCGC	2 cut(s)	599, 1265
Cfr10I	RCCGGY	1 cut(s)	32
Cfr13I	GGNCC	7 cut(s)	331, 424, 587, 942, 2018, 2053, 2251
Csp6I	GTAC	8 cut(s)	233, 823, 957, 1481, 1928, 2241, 3262, 3307
CviQI	GTAC	8 cut(s)	233, 823, 957, 1481, 1928, 2241, 3262, 3307
DraIII	CACNNNGTG	2 cut(s)	582, 1235
DrdI	GACNNNNNNGTC	2 cut(s)	386, 2961
DseDI	GACNNNNNNGTC	2 cut(s)	386, 2961
Eam1104I	CTCTTC	5 cut(s)	1551, 2092, 2218, 2793, 2927
EarI	CTCTTC	5 cut(s)	1551, 2092, 2218, 2793, 2927
EciI	GGCGGA	4 cut(s)	253, 579, 2732, 3284
Ecl136II	GAGCTC	2 cut(s)	936, 3001
Eco130I	CCWWGG	3 cut(s)	501, 600, 2830
Eco24I	GRGCYC	2 cut(s)	938, 3003
Eco31I	GGTCTC	2 cut(s)	980, 1827
Eco47I	GGWCC	5 cut(s)	331, 424, 587, 942, 2018
Eco53kI	GAGCTC	2 cut(s)	936, 3001
Eco57I	CTGAAG	5 cut(s)	109, 717, 2030, 2130, 2253
EcoICRI	GAGCTC	2 cut(s)	936, 3001
EcoNI	CCTNNNNNAGG	1 cut(s)	369
EcoO109I	RGGNCCY	2 cut(s)	942, 2053
EcoRI	GAATTC	1 cut(s)	2299
EcoRII	CCWGG	5 cut(s)	48, 318, 630, 2253, 2988
EcoT14I	CCWWGG	3 cut(s)	501, 600, 2830
EcoT38I	GRGCYC	2 cut(s)	938, 3003
ErhI	CCWWGG	3 cut(s)	501, 600, 2830
Esp3I	CGTCTC	1 cut(s)	1635
FalI	AAGNNNNNCTT	6 cut(s)	1103, 1135, 1876, 1908, 2490, 2522
FaqI	GGGAC	6 cut(s)	25, 437, 928, 1954, 2004, 2482
FauI	CCCGC	3 cut(s)	196, 557, 1541
FauNDI	CATATG	1 cut(s)	547
FbaI	TGATCA	4 cut(s)	1393, 2482, 3246, 3355
FblI	GTMKAC	3 cut(s)	1081, 1436, 2570
FriOI	GRGCYC	2 cut(s)	938, 3003
FspBI	CTAG	6 cut(s)	918, 939, 1604, 1785, 2657, 2841
GlaI	GCGC	2 cut(s)	598, 1264
GsuI	CTGGAG	1 cut(s)	3129
HaeII	RGCGCY	1 cut(s)	600
HaeIII	GGCC	2 cut(s)	2055, 2253
HapII	CCGG	4 cut(s)	33, 284, 2746, 3310
HhaI	GCGC	2 cut(s)	599, 1265
Hin6I	GCGC	2 cut(s)	597, 1263
HinP1I	GCGC	2 cut(s)	597, 1263
HincII	GTYRAC	1 cut(s)	391
HindII	GTYRAC	1 cut(s)	391
HindIII	AAGCTT	1 cut(s)	1489
HpaII	CCGG	4 cut(s)	33, 284, 2746, 3310
HphI	GGTGA	5 cut(s)	130, 364, 1304, 1972, 3241
Hpy166II	GTNNAC	4 cut(s)	391, 1082, 1437, 2571
Hpy8I	GTNNAC	4 cut(s)	391, 1082, 1437, 2571
HpyCH4III	ACNGT	9 cut(s)	388, 412, 428, 490, 708, 1255, 1292, 2107, 2261
HpyCH4IV	ACGT	2 cut(s)	825, 1483
HpySE526I	ACGT	2 cut(s)	825, 1483
HspAI	GCGC	2 cut(s)	597, 1263
KpnI	GGTACC	2 cut(s)	1931, 2244
Ksp22I	TGATCA	4 cut(s)	1393, 2482, 3246, 3355
LmnI	GCTCC	6 cut(s)	274, 328, 911, 2362, 2383, 3380
MaeI	CTAG	6 cut(s)	918, 939, 1604, 1785, 2657, 2841
MaeII	ACGT	2 cut(s)	825, 1483
MaeIII	GTNAC	6 cut(s)	524, 868, 1500, 1888, 2541, 2693
MbiI	CCGCTC	1 cut(s)	269
MfeI	CAATTG	1 cut(s)	2414
MflI	RGATCY	8 cut(s)	92, 305, 2455, 2585, 2603, 2728, 2822, 2969
MhlI	GDGCHC	4 cut(s)	501, 938, 2127, 3003
MlyI	GAGTC	7 cut(s)	47, 980, 1862, 1976, 2036, 2744, 3311
MmeI	TCCRAC	8 cut(s)	208, 281, 800, 889, 1932, 2433, 2635, 2784
MroXI	GAANNNNTTC	2 cut(s)	2502, 3096
MslI	CAYNNNNRTG	3 cut(s)	605, 997, 3176
MspCI	CTTAAG	1 cut(s)	2507
MspI	CCGG	4 cut(s)	33, 284, 2746, 3310
MspR9I	CCNGG	6 cut(s)	50, 320, 632, 2255, 2990, 3311
MunI	CAATTG	1 cut(s)	2414
MvaI	CCWGG	5 cut(s)	50, 320, 632, 2255, 2990
MvnI	CGCG	1 cut(s)	1126
NciI	CCSGG	1 cut(s)	3311
NcoI	CCATGG	1 cut(s)	600
NdeI	CATATG	1 cut(s)	547
NmuCI	GTSAC	2 cut(s)	868, 2693
NruI	TCGCGA	1 cut(s)	1126
NspI	RCATGY	2 cut(s)	2840, 3146
NspV	TTCGAA	2 cut(s)	76, 458
PaeI	GCATGC	1 cut(s)	2840
PagI	TCATGA	1 cut(s)	3171
PcsI	WCGNNNNNNNCGW	2 cut(s)	2962, 2971
PdmI	GAANNNNTTC	2 cut(s)	2502, 3096
PflFI	GACNNNGTC	1 cut(s)	1852
PflMI	CCANNNNNTGG	1 cut(s)	1865
PleI	GAGTC	7 cut(s)	46, 979, 1861, 1975, 2035, 2743, 3311
PpsI	GAGTC	7 cut(s)	46, 979, 1861, 1975, 2035, 2743, 3311
Ppu21I	YACGTR	1 cut(s)	1484
PpuMI	RGGWCCY	1 cut(s)	942
PshBI	ATTAAT	1 cut(s)	1773
PsiI	TTATAA	1 cut(s)	1424
Psp124BI	GAGCTC	2 cut(s)	938, 3003
Psp5II	RGGWCCY	1 cut(s)	942
Psp6I	CCWGG	5 cut(s)	48, 318, 630, 2253, 2988
PspGI	CCWGG	5 cut(s)	48, 318, 630, 2253, 2988
PspPI	GGNCC	7 cut(s)	331, 424, 587, 942, 2018, 2053, 2251
PspPPI	RGGWCCY	1 cut(s)	942
PstI	CTGCAG	2 cut(s)	340, 3091
PstNI	CAGNNNCTG	1 cut(s)	3095
PsuI	RGATCY	8 cut(s)	92, 305, 2455, 2585, 2603, 2728, 2822, 2969
PsyI	GACNNNGTC	1 cut(s)	1852
RruI	TCGCGA	1 cut(s)	1126
RsaI	GTAC	8 cut(s)	234, 824, 958, 1482, 1929, 2242, 3263, 3308
RsaNI	GTAC	8 cut(s)	233, 823, 957, 1481, 1928, 2241, 3262, 3307
RseI	CAYNNNNRTG	3 cut(s)	605, 997, 3176
SacI	GAGCTC	2 cut(s)	938, 3003
Sau96I	GGNCC	7 cut(s)	331, 424, 587, 942, 2018, 2053, 2251
SchI	GAGTC	7 cut(s)	47, 980, 1862, 1976, 2036, 2744, 3311
ScrFI	CCNGG	6 cut(s)	50, 320, 632, 2255, 2990, 3311
SduI	GDGCHC	4 cut(s)	501, 938, 2127, 3003
SfcI	CTRYAG	4 cut(s)	336, 2103, 2277, 3087
SfuI	TTCGAA	2 cut(s)	76, 458
SgrAI	CRCCGGYG	1 cut(s)	32
SinI	GGWCC	5 cut(s)	331, 424, 587, 942, 2018
SmiMI	CAYNNNNRTG	3 cut(s)	605, 997, 3176
SmlI	CTYRAG	7 cut(s)	737, 791, 2366, 2507, 2719, 2732, 3065
SmoI	CTYRAG	7 cut(s)	737, 791, 2366, 2507, 2719, 2732, 3065
SphI	GCATGC	1 cut(s)	2840
SspMI	CTAG	6 cut(s)	918, 939, 1604, 1785, 2657, 2841
SstI	GAGCTC	2 cut(s)	938, 3003
StyD4I	CCNGG	6 cut(s)	48, 318, 630, 2253, 2988, 3309
StyI	CCWWGG	3 cut(s)	501, 600, 2830
TaaI	ACNGT	9 cut(s)	388, 412, 428, 490, 708, 1255, 1292, 2107, 2261
TaiI	ACGT	2 cut(s)	828, 1486
TaqI	TCGA	6 cut(s)	76, 458, 536, 969, 2121, 2635
TaqII	GACCGA	1 cut(s)	1809
TatI	WGTACW	1 cut(s)	3261
TauI	GCSGC	1 cut(s)	269
TscAI	CASTG	6 cut(s)	345, 417, 2139, 2266, 2277, 2650
TseFI	GTSAC	2 cut(s)	868, 2693
Tsp45I	GTSAC	2 cut(s)	868, 2693
TspGWI	ACGGA	2 cut(s)	713, 1894
TspRI	CASTG	6 cut(s)	345, 417, 2139, 2266, 2277, 2650
Tth111I	GACNNNGTC	1 cut(s)	1852
Van91I	CCANNNNNTGG	1 cut(s)	1865
Vha464I	CTTAAG	1 cut(s)	2507
VpaK11BI	GGWCC	5 cut(s)	331, 424, 587, 942, 2018
VspI	ATTAAT	1 cut(s)	1773
XagI	CCTNNNNNAGG	1 cut(s)	369
XapI	RAATTY	6 cut(s)	431, 1706, 2008, 2299, 2476, 3374
XceI	RCATGY	2 cut(s)	2840, 3146
XmiI	GTMKAC	3 cut(s)	1081, 1436, 2570
XmnI	GAANNNNTTC	2 cut(s)	2502, 3096
XspI	CTAG	6 cut(s)	918, 939, 1604, 1785, 2657, 2841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.