MD03G1203700.v1.1
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0007671
Physical Location & Seq
Forward (+)
27833528 .. 27838760
5233 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1203700.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGTTGTTACTTTTTCATTTCCAGCTAGTTTCTCATGCACAAGCTGGACATGATATTACACACGGTTTATTGAATAGCAACGTTGGCTTGGAAAGTCTGAAACTTCCTGTTATGGAGGGTTTGGATGCATTATTATTAGCGAATAAAAAGCATTTGCCCAAGTCAAATGAAAACAAAGTAAATGGAACTGCTGTGGTGCAGCAATCACCTTCAGCACTTTGGTTTTCTCCAGAATCATCAAAAAAGATACCGCTTTCTTCTGTAACATCAATTATTGATGGGTTGAAGAGACTGTATGTTCAGAAGCTGAAGCCATTAGAAGTTACTTATAAGTTCAACAATTTTGTATCCCCATTAATGACAAATGGTGATTTTGATGCCAAACCCATGGTTATGCTTTTGGGTCAATACTCCACTGGGAAAACAACATTCATTAAACATTTGCTTAAAAGTAGTTATCCAGGAGCTCACATTGGTCCTGAGCCTACAACCGATCGATTTGTCGTTGTTATGTCTGGGCCTGATGAAAGAAGTATTCCTGGGAATACTATTGCCGTCCAAGCTGATATGCCATTTAGCGGTCTTACAACTTTTGGAACAGCTTTCTTGTCAAAGTTTGAGTGTGCTCAAATGCCACATTCTCTGCTAGAACACATTACTATTGTGGATACTCCTGGAGTTTTATCTGGAGAGAAGCAACGGACGCAAAGAGCCTATGATTTTAATGGGGTAACTTCGTGGTTTGCTGCGAAGTGTGACCTCATTCTACTTCTGTTTGATCCTCACAAACTTGATGTTAGTGATGAGTACAAGCGTGTTATTTCATCTTTACATGGCCATGACGATAAAATTCGTGTTGTTCTGAACAAGGCAGATCAAAGTGATACTCAACAATTGATGAGGGTTTATGGAGCGTTGATGTGGTCACTTGGGAGGGTTTTTAATACTCCCGAGGTCATGCGAGTTTATATCGGCTCATTCAATGACAAACCTGTAAATGAGGCTGCTACGGGTCCAGTCGGGAAAGAACTCTTTGAAAAGGAACTGGGAGATCTTCTGTCTGATTTAAACGATATTCCAAAGAAGGCTTGTGAGCGCAAAATCAACGAATTTGTGAAGCGTGCCAGAGCTGCCAAGATACATGCATGCATAATTAGCCATTTAAAGGCGGAGATGCCTGCCATGTTTTGGAAATCTACGGCTCAACAGAAGCTTATTGATAATTTGGAAGACGAATTTAAAAAGGTTCAGGGGGAGCACCATCTACCTCCAGGGGATTTCCCGGACGTAAACCGCTACAGGGACATCTTGAGTGGTTACAGCATTGACAACTTCGAGAAGTTAAAACCTAAGATGATAGATGCCGTCGATGAAATGCTGGGTTATGATATCCCGGAACTCTTGAAGAAATTCAAAAATCCATACGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0005911 GO:0005929 GO:0006810 GO:0006886 GO:0006897 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0007399 GO:0008104 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009987 GO:0010008 GO:0010033 GO:0010830 GO:0010831 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0020016 GO:0020018 GO:0022008 GO:0022603 GO:0022607 GO:0030030 GO:0030031 GO:0030054 GO:0030154 GO:0030182 GO:0031090 GO:0031175 GO:0031253 GO:0031410 GO:0031901 GO:0031982 GO:0032386 GO:0032388 GO:0032456 GO:0032501 GO:0032502 GO:0032879 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042538 GO:0042886 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044441 GO:0044444 GO:0044446 GO:0044459 GO:0044463 GO:0044464 GO:0044782 GO:0045184 GO:0045595 GO:0045597 GO:0046907 GO:0048468 GO:0048518 GO:0048522 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051094 GO:0051128 GO:0051130 GO:0051147 GO:0051149 GO:0051153 GO:0051155 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051641 GO:0051649 GO:0051716 GO:0055037 GO:0055038 GO:0055044 GO:0060142 GO:0060143 GO:0060170 GO:0060271 GO:0060341 GO:0060627 GO:0061512 GO:0065003 GO:0065007 GO:0070727 GO:0070848 GO:0070887 GO:0070925 GO:0071310 GO:0071363 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0097708 GO:0098588 GO:0098590 GO:0098657 GO:0098805 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901739 GO:1901741 GO:1990089 GO:1990090 GO:2001135 GO:2001137
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Dynamin_N EF-hand_4 EHD_N

Protein Analysis

477

Amino Acids

53.33

Weight (kDa)

6.98

Isoelectric Point (pI)

27.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EHD_N PF16880 94 - 126 1.4e-15 N-terminal EH-domain containing protein
Dynamin_N PF00350 131 - 291 5.3e-14 Dynamin family
MMR_HSR1 PF01926 131 - 290 9.1e-08 50S ribosome-binding GTPase
DUF5600 PF18150 366 - 467 4.4e-36 Domain of unknown function (DUF5600)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 330
AccB7I CCANNNNNTGG 1 cut(s) 1188
AciI CCGC 4 cut(s) 251, 579, 1169, 1294
AclI AACGTT 1 cut(s) 81
AclWI GGATC 1 cut(s) 773
AcoI YGGCCR 1 cut(s) 835
AcsI RAATTY 4 cut(s) 849, 1109, 1235, 1409
AcuI CTGAAG 2 cut(s) 195, 329
AfaI GTAC 1 cut(s) 809
AfiI CCNNNNNNNGG 4 cut(s) 578, 1165, 1188, 1300
AgsI TTSAA 7 cut(s) 73, 286, 337, 982, 1037, 1405, 1414
AjnI CCWGG 4 cut(s) 460, 538, 673, 1270
AluBI AGCT 8 cut(s) 25, 44, 307, 467, 563, 602, 1130, 1213
AluI AGCT 8 cut(s) 25, 44, 307, 467, 563, 602, 1130, 1213
Alw21I GWGCWC 3 cut(s) 469, 628, 1260
Alw26I GTCTC 1 cut(s) 283
AlwI GGATC 1 cut(s) 773
AlwNI CAGNNNCTG 1 cut(s) 307
Ama87I CYCGRG 1 cut(s) 950
AoxI GGCC 2 cut(s) 518, 835
ApeKI GCWGC 4 cut(s) 199, 746, 1004, 1130
ApoI RAATTY 4 cut(s) 849, 1109, 1235, 1409
AseI ATTAAT 1 cut(s) 356
Asp700I GAANNNNTTC 1 cut(s) 1409
AspLEI GCGC 1 cut(s) 1098
AspS9I GGNCC 3 cut(s) 476, 518, 1013
AsuC2I CCSGG 2 cut(s) 1283, 1394
AsuHPI GGTGA 2 cut(s) 198, 380
AvaI CYCGRG 1 cut(s) 950
AvaII GGWCC 2 cut(s) 476, 1013
BalI TGGCCA 1 cut(s) 837
BanII GRGCYC 1 cut(s) 469
BbsI GAAGAC 1 cut(s) 1236
Bbv12I GWGCWC 3 cut(s) 469, 628, 1260
BbvI GCAGC 4 cut(s) 211, 733, 991, 1117
BccI CCATC 2 cut(s) 272, 1269
BceAI ACGGC 3 cut(s) 539, 1215, 1349
BciT130I CCWGG 4 cut(s) 462, 540, 675, 1272
BciVI GTATCC 2 cut(s) 358, 661
BcnI CCSGG 2 cut(s) 1283, 1394
BcoDI GTCTC 1 cut(s) 283
BfaI CTAG 2 cut(s) 26, 647
BfmI CTRYAG 1 cut(s) 1297
BfuI GTATCC 2 cut(s) 358, 661
BglII AGATCT 1 cut(s) 1051
BisI GCNGC 4 cut(s) 200, 747, 1005, 1131
BlsI GCNGC 4 cut(s) 201, 748, 1006, 1132
Bme1390I CCNGG 6 cut(s) 462, 540, 675, 1272, 1283, 1394
Bme18I GGWCC 2 cut(s) 476, 1013
BmeT110I CYCGRG 1 cut(s) 950
BmgT120I GGNCC 3 cut(s) 476, 518, 1013
BmiI GGNNCC 1 cut(s) 1014
BmrFI CCNGG 6 cut(s) 462, 540, 675, 1272, 1283, 1394
BmrI ACTGGG 2 cut(s) 426, 1055
BmsI GCATC 4 cut(s) 115, 367, 1164, 1351
BmuI ACTGGG 2 cut(s) 426, 1055
BpiI GAAGAC 1 cut(s) 1236
BpmI CTGGAG 4 cut(s) 213, 696, 708, 1254
Bpu10I CCTNAGC 1 cut(s) 480
BpuEI CTTGAG 1 cut(s) 1330
BpuMI CCSGG 2 cut(s) 1283, 1394
Bsa29I ATCGAT 1 cut(s) 496
BsaJI CCNNGG 4 cut(s) 387, 539, 951, 1271
Bsc4I CCNNNNNNNGG 4 cut(s) 578, 1165, 1188, 1300
Bse1I ACTGG 3 cut(s) 421, 1016, 1050
BseBI CCWGG 4 cut(s) 462, 540, 675, 1272
BseCI ATCGAT 1 cut(s) 496
BseDI CCNNGG 4 cut(s) 387, 539, 951, 1271
BseGI GGATG 1 cut(s) 130
BseLI CCNNNNNNNGG 4 cut(s) 578, 1165, 1188, 1300
BseMII CTCAG 1 cut(s) 471
BseNI ACTGG 3 cut(s) 421, 1016, 1050
BseXI GCAGC 4 cut(s) 211, 733, 991, 1117
BseYI CCCAGC 1 cut(s) 1378
BsgI GTGCAG 1 cut(s) 218
Bsh1285I CGRYCG 1 cut(s) 496
BshFI GGCC 2 cut(s) 520, 837
BshVI ATCGAT 1 cut(s) 496
BsiEI CGRYCG 1 cut(s) 496
BsiHKAI GWGCWC 3 cut(s) 469, 628, 1260
BsiHKCI CYCGRG 1 cut(s) 950
BsiSI CCGG 2 cut(s) 1283, 1394
BslFI GGGAC 1 cut(s) 1316
BslI CCNNNNNNNGG 4 cut(s) 578, 1165, 1188, 1300
BsmAI GTCTC 1 cut(s) 283
BsmFI GGGAC 1 cut(s) 1316
BsnI GGCC 2 cut(s) 520, 837
BsoBI CYCGRG 1 cut(s) 950
Bsp1286I GDGCHC 3 cut(s) 469, 628, 1260
Bsp143I GATC 4 cut(s) 493, 778, 874, 1051
Bsp19I CCATGG 1 cut(s) 387
BspACI CCGC 4 cut(s) 251, 579, 1169, 1294
BspANI GGCC 2 cut(s) 520, 837
BspCNI CTCAG 1 cut(s) 472
BspDI ATCGAT 1 cut(s) 496
BspLI GGNNCC 1 cut(s) 1014
BspPI GGATC 1 cut(s) 773
BsrI ACTGG 3 cut(s) 421, 1016, 1050
BssECI CCNNGG 4 cut(s) 387, 539, 951, 1271
BssMI GATC 4 cut(s) 493, 778, 874, 1051
BssT1I CCWWGG 1 cut(s) 387
Bst2UI CCWGG 4 cut(s) 462, 540, 675, 1272
Bst4CI ACNGT 2 cut(s) 65, 294
Bst6I CTCTTC 1 cut(s) 281
BstC8I GCNNGC 3 cut(s) 1122, 1147, 1179
BstDEI CTNAG 2 cut(s) 480, 1350
BstDSI CCRYGG 1 cut(s) 387
BstF5I GGATG 1 cut(s) 130
BstHHI GCGC 1 cut(s) 1098
BstKTI GATC 4 cut(s) 496, 781, 877, 1054
BstMAI GTCTC 1 cut(s) 283
BstMBI GATC 4 cut(s) 493, 778, 874, 1051
BstMCI CGRYCG 1 cut(s) 496
BstMWI GCNNNNNNNGC 5 cut(s) 84, 560, 703, 1130, 1155
BstNI CCWGG 4 cut(s) 462, 540, 675, 1272
BstNSI RCATGY 2 cut(s) 1145, 1149
BstSCI CCNGG 6 cut(s) 460, 538, 673, 1270, 1281, 1392
BstSFI CTRYAG 1 cut(s) 1297
BstV1I GCAGC 4 cut(s) 211, 733, 991, 1117
BstV2I GAAGAC 1 cut(s) 1236
BstX2I RGATCY 1 cut(s) 1051
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 1 cut(s) 1051
Bsu15I ATCGAT 1 cut(s) 496
BsuI GTATCC 2 cut(s) 358, 661
BsuRI GGCC 2 cut(s) 520, 837
BsuTUI ATCGAT 1 cut(s) 496
BtgI CCRYGG 1 cut(s) 387
BtsCI GGATG 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 414
Cac8I GCNNGC 3 cut(s) 1122, 1147, 1179
CaiI CAGNNNCTG 1 cut(s) 307
CfoI GCGC 1 cut(s) 1098
Cfr13I GGNCC 3 cut(s) 476, 518, 1013
ClaI ATCGAT 1 cut(s) 496
CseI GACGC 1 cut(s) 712
Csp6I GTAC 1 cut(s) 808
CviAII CATG 9 cut(s) 35, 50, 388, 833, 839, 958, 1142, 1146, 1183
CviQI GTAC 1 cut(s) 808
DdeI CTNAG 2 cut(s) 480, 1350
DpnI GATC 4 cut(s) 495, 780, 876, 1053
DpnII GATC 4 cut(s) 493, 778, 874, 1051
DraI TTTAAA 3 cut(s) 1068, 1164, 1240
EaeI YGGCCR 1 cut(s) 835
Eam1104I CTCTTC 1 cut(s) 281
EarI CTCTTC 1 cut(s) 281
EciI GGCGGA 1 cut(s) 1184
Ecl136II GAGCTC 1 cut(s) 467
Eco130I CCWWGG 1 cut(s) 387
Eco24I GRGCYC 1 cut(s) 469
Eco32I GATATC 1 cut(s) 1390
Eco47I GGWCC 2 cut(s) 476, 1013
Eco53kI GAGCTC 1 cut(s) 467
Eco57I CTGAAG 2 cut(s) 195, 329
Eco88I CYCGRG 1 cut(s) 950
EcoICRI GAGCTC 1 cut(s) 467
EcoRII CCWGG 4 cut(s) 460, 538, 673, 1270
EcoRV GATATC 1 cut(s) 1390
EcoT14I CCWWGG 1 cut(s) 387
EcoT22I ATGCAT 3 cut(s) 130, 1147, 1151
EcoT38I GRGCYC 1 cut(s) 469
ErhI CCWWGG 1 cut(s) 387
FaeI CATG 9 cut(s) 38, 53, 391, 836, 842, 961, 1145, 1149, 1186
FaqI GGGAC 1 cut(s) 1316
FatI CATG 9 cut(s) 34, 49, 387, 832, 838, 957, 1141, 1145, 1182
Fnu4HI GCNGC 4 cut(s) 200, 747, 1005, 1131
FokI GGATG 1 cut(s) 137
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 4 cut(s) 200, 747, 1005, 1131
FspBI CTAG 2 cut(s) 26, 647
GlaI GCGC 1 cut(s) 1097
GluI GCNGC 4 cut(s) 200, 747, 1005, 1131
GsaI CCCAGC 1 cut(s) 1382
GsuI CTGGAG 4 cut(s) 213, 696, 708, 1254
HaeIII GGCC 2 cut(s) 520, 837
HapII CCGG 2 cut(s) 1283, 1394
HgaI GACGC 1 cut(s) 712
HhaI GCGC 1 cut(s) 1098
Hin1II CATG 9 cut(s) 38, 53, 391, 836, 842, 961, 1145, 1149, 1186
Hin6I GCGC 1 cut(s) 1096
HinP1I GCGC 1 cut(s) 1096
HindIII AAGCTT 1 cut(s) 1211
HinfI GANTC 1 cut(s) 233
HpaII CCGG 2 cut(s) 1283, 1394
HphI GGTGA 2 cut(s) 198, 380
Hpy166II GTNNAC 1 cut(s) 1291
Hpy188I TCNGA 4 cut(s) 99, 303, 864, 1063
Hpy188III TCNNGA 8 cut(s) 230, 479, 687, 950, 1021, 1309, 1336, 1402
Hpy8I GTNNAC 1 cut(s) 1291
Hpy99I CGWCG 1 cut(s) 1370
HpyAV CCTTC 2 cut(s) 219, 1078
HpyCH4III ACNGT 2 cut(s) 65, 294
HpyCH4IV ACGT 2 cut(s) 81, 1287
HpyCH4V TGCA 5 cut(s) 38, 128, 199, 1145, 1149
HpyF10VI GCNNNNNNNGC 5 cut(s) 84, 560, 703, 1130, 1155
HpyF3I CTNAG 2 cut(s) 480, 1350
HpySE526I ACGT 2 cut(s) 81, 1287
Hsp92II CATG 9 cut(s) 38, 53, 391, 836, 842, 961, 1145, 1149, 1186
HspAI GCGC 1 cut(s) 1096
Kzo9I GATC 4 cut(s) 493, 778, 874, 1051
LmnI GCTCC 3 cut(s) 464, 911, 1255
Lsp1109I GCAGC 4 cut(s) 211, 733, 991, 1117
LweI GCATC 4 cut(s) 115, 367, 1164, 1351
MaeI CTAG 2 cut(s) 26, 647
MaeII ACGT 2 cut(s) 81, 1287
MaeIII GTNAC 7 cut(s) 6, 262, 322, 730, 755, 924, 1316
MalI GATC 4 cut(s) 495, 780, 876, 1053
MboI GATC 4 cut(s) 493, 778, 874, 1051
MboII GAAGA 5 cut(s) 249, 298, 1046, 1241, 1417
MfeI CAATTG 1 cut(s) 893
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 3 cut(s) 469, 628, 1260
MlsI TGGCCA 1 cut(s) 837
MluCI AATT 9 cut(s) 270, 340, 849, 893, 1109, 1152, 1222, 1235, 1409
MluNI TGGCCA 1 cut(s) 837
MnlI CCTC 8 cut(s) 109, 770, 792, 894, 927, 946, 994, 1278
Mox20I TGGCCA 1 cut(s) 837
Mph1103I ATGCAT 3 cut(s) 130, 1147, 1151
MroXI GAANNNNTTC 1 cut(s) 1409
MscI TGGCCA 1 cut(s) 837
MseI TTAA 9 cut(s) 356, 435, 447, 723, 942, 1067, 1163, 1239, 1343
MslI CAYNNNNRTG 2 cut(s) 392, 837
Msp20I TGGCCA 1 cut(s) 837
MspI CCGG 2 cut(s) 1283, 1394
MspR9I CCNGG 6 cut(s) 462, 540, 675, 1272, 1283, 1394
MunI CAATTG 1 cut(s) 893
MvaI CCWGG 4 cut(s) 462, 540, 675, 1272
MwoI GCNNNNNNNGC 5 cut(s) 84, 560, 703, 1130, 1155
NciI CCSGG 2 cut(s) 1283, 1394
NcoI CCATGG 1 cut(s) 387
NdeII GATC 4 cut(s) 493, 778, 874, 1051
NlaIII CATG 9 cut(s) 38, 53, 391, 836, 842, 961, 1145, 1149, 1186
NlaIV GGNNCC 1 cut(s) 1014
NmuCI GTSAC 2 cut(s) 755, 924
NsiI ATGCAT 3 cut(s) 130, 1147, 1151
NspI RCATGY 2 cut(s) 1145, 1149
PaeI GCATGC 1 cut(s) 1149
PdmI GAANNNNTTC 1 cut(s) 1409
PfeI GAWTC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 1188
PfoI TCCNGGA 4 cut(s) 460, 673, 1281, 1392
PkrI GCNGC 4 cut(s) 201, 748, 1006, 1132
Ple19I CGATCG 1 cut(s) 496
PshBI ATTAAT 1 cut(s) 356
PsiI TTATAA 1 cut(s) 330
Psp124BI GAGCTC 1 cut(s) 469
Psp1406I AACGTT 1 cut(s) 81
Psp6I CCWGG 4 cut(s) 460, 538, 673, 1270
PspFI CCCAGC 1 cut(s) 1378
PspGI CCWGG 4 cut(s) 460, 538, 673, 1270
PspN4I GGNNCC 1 cut(s) 1014
PspPI GGNCC 3 cut(s) 476, 518, 1013
PstNI CAGNNNCTG 1 cut(s) 307
PsuI RGATCY 1 cut(s) 1051
PvuI CGATCG 1 cut(s) 496
RsaI GTAC 1 cut(s) 809
RsaNI GTAC 1 cut(s) 808
RseI CAYNNNNRTG 2 cut(s) 392, 837
SacI GAGCTC 1 cut(s) 469
SaqAI TTAA 9 cut(s) 356, 435, 447, 723, 942, 1067, 1163, 1239, 1343
SatI GCNGC 4 cut(s) 200, 747, 1005, 1131
Sau3AI GATC 4 cut(s) 493, 778, 874, 1051
Sau96I GGNCC 3 cut(s) 476, 518, 1013
ScrFI CCNGG 6 cut(s) 462, 540, 675, 1272, 1283, 1394
SduI GDGCHC 3 cut(s) 469, 628, 1260
SfaNI GCATC 4 cut(s) 115, 367, 1164, 1351
SfcI CTRYAG 1 cut(s) 1297
SinI GGWCC 2 cut(s) 476, 1013
SmiMI CAYNNNNRTG 2 cut(s) 392, 837
SmlI CTYRAG 1 cut(s) 1309
SmoI CTYRAG 1 cut(s) 1309
SphI GCATGC 1 cut(s) 1149
Sse9I AATT 9 cut(s) 270, 340, 849, 893, 1109, 1152, 1222, 1235, 1409
SsiI CCGC 4 cut(s) 251, 579, 1169, 1294
SspMI CTAG 2 cut(s) 26, 647
SstI GAGCTC 1 cut(s) 469
StyD4I CCNGG 6 cut(s) 460, 538, 673, 1270, 1281, 1392
StyI CCWWGG 1 cut(s) 387
TaaI ACNGT 2 cut(s) 65, 294
TaiI ACGT 2 cut(s) 84, 1290
TaqI TCGA 3 cut(s) 496, 1335, 1368
TasI AATT 9 cut(s) 270, 340, 849, 893, 1109, 1152, 1222, 1235, 1409
TatI WGTACW 1 cut(s) 807
TfiI GAWTC 1 cut(s) 233
Tru1I TTAA 9 cut(s) 356, 435, 447, 723, 942, 1067, 1163, 1239, 1343
Tru9I TTAA 9 cut(s) 356, 435, 447, 723, 942, 1067, 1163, 1239, 1343
TscAI CASTG 1 cut(s) 421
TseFI GTSAC 2 cut(s) 755, 924
TseI GCWGC 4 cut(s) 199, 746, 1004, 1130
Tsp45I GTSAC 2 cut(s) 755, 924
TspDTI ATGAA 6 cut(s) 5, 183, 421, 540, 813, 1386
TspGWI ACGGA 1 cut(s) 715
TspRI CASTG 1 cut(s) 421
Van91I CCANNNNNTGG 1 cut(s) 1188
VpaK11BI GGWCC 2 cut(s) 476, 1013
VspI ATTAAT 1 cut(s) 356
XapI RAATTY 4 cut(s) 849, 1109, 1235, 1409
XceI RCATGY 2 cut(s) 1145, 1149
XmnI GAANNNNTTC 1 cut(s) 1409
XspI CTAG 2 cut(s) 26, 647
Zsp2I ATGCAT 3 cut(s) 130, 1147, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.