RLG00000034053
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0007671
Physical Location & Seq
Forward (+)
35877064 .. 35882117
5054 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034053

Sequence Viewer

Length: 1638 bp
ATGGAAATTTCCTCAGTTCCGATCAGTTCGTGCTCCAAAGAGCACCAGAAAATCTACCGGGAGTGGTTTCAGTTCGCAGATTCAGATAATGATGGCCGCATTACGGGGAGTGATGCTATTAAGTTCTTCGGCATGTCCAATCTGTCTCGGCAAGATCTCAAGCAGGTGTGGGCGATTACCGATTCAAAGAGGCAGGGTTTTCTTGGTTTCACCGAGTTCATTGCTGCTATGCAGCTAGTTTCTCTTGCACAAGCTGGACATGAGATTACAAATGATTTATTGACCAGCAATGCAGACTTGGAGAACTTGAAACCTCCTGTCATGGAGGGGTTGGATGTGTTATTAGCGAAAAAAAAGCGTTCGAACAAGACAAATGAGAACGAAGTAAATGGTACTCCTGTGGTGCAACAATCACCTTCAGCACTTTGGTTTTCTTCAAAATCAGCAAAAAAGGTTCCGCTCTCTGCTGTAACATCAATTGTTGATGGGTTGAAGAGATTATATATCCAGAAGCTGAAGCCATTAGAAGTTACTTACCGGTTTAATGATTTTGTATCTCCATTACTGACAAACAGTGATTTTGATGCCAAACCCATGGTTATGCTTTTGGGTCAATACTCCACTGGGAAAACAACATTTATTAAACATTTGCTTAAAACTAGTTATCCAGGAGCTCACATTGGTCCTGAGCCTACAACAGATAGATTTGTTGTTGTTATGTCTGGACCTGATGAAAGAAGTGTTCCTGGGAATACTATTGCGGTGCAAGCTGACATGCCATTTAGTGGTCTCACATCTTTTGGAACATCATTCTTGTCAAAGTTTGAGTGTTCCCAAATGCCACATTCTTTGTTGGAGCACATCACATTTGTAGATACTCCTGGCGTTTTATCTGGAGAGAAGCAACGAACCCAACGAGCCTATGATTTTACTGGAGTAACTTCATGGTTCGCTTCAAAGTGTGACCTCATTCTACTTTTGTTTGATCCTCACAAACTTGATGTGAGTGATGAGTTCAAGCGTGTGATTTCATCTTTGCGTGGTCATGACGATAAGATCCGCGTTGTACTCAATAAGGCAGATCAAATCGATACCCAACAATTAATGAGGGTTTATGGAGCATTGATGTGGTCCCTCGGAAAGGTTCTGAATACTCCTGAGGTCATGCGAGTTTATATTGGATCATTCAATGACAAACCTGTAAATGAGGCTGCTTCTGGTCCAGTAGGGAAAGAACTCTTTGAGAGAGAACAAGAGGATCTTCTTTCTGACTTAAAGGATATTCCTAAGAAGTCTTGTGATCGCCGGATCAATGAATTTGTTAAGCGTGCCAGAGCTGCCAAGATACATGCTTACATTATTAGCCATTTGAGAAAAGAGATGCCAGCTTTGATTGGGAAAGCTAAGACTCAAAGGAAACTTACTGATAATTTGGAAGATGAGTTTAAAAAGGTTCAAAGGGAATTTCATCTACCTCCAGGGGATTTTCCGAATGTTGAGCAATTCAGGGAGACCTTAAGTGGTTACAGCTTTGACAATTTTGAGAAGTTGAAGCCTAGTATGATAAAAGCAGTTGACGACATGCTGGGTTATGATATCCCGGAGCTCTTGAAGAATTTCAGAAATCCATACGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0005911 GO:0005929 GO:0006810 GO:0006886 GO:0006897 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0007399 GO:0008104 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009987 GO:0010008 GO:0010033 GO:0010830 GO:0010831 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0020016 GO:0020018 GO:0022008 GO:0022603 GO:0022607 GO:0030030 GO:0030031 GO:0030054 GO:0030154 GO:0030182 GO:0031090 GO:0031175 GO:0031253 GO:0031410 GO:0031901 GO:0031982 GO:0032386 GO:0032388 GO:0032456 GO:0032501 GO:0032502 GO:0032879 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042538 GO:0042886 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044441 GO:0044444 GO:0044446 GO:0044459 GO:0044463 GO:0044464 GO:0044782 GO:0045184 GO:0045595 GO:0045597 GO:0046907 GO:0048468 GO:0048518 GO:0048522 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051094 GO:0051128 GO:0051130 GO:0051147 GO:0051149 GO:0051153 GO:0051155 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051641 GO:0051649 GO:0051716 GO:0055037 GO:0055038 GO:0055044 GO:0060142 GO:0060143 GO:0060170 GO:0060271 GO:0060341 GO:0060627 GO:0061512 GO:0065003 GO:0065007 GO:0070727 GO:0070848 GO:0070887 GO:0070925 GO:0071310 GO:0071363 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0097708 GO:0098588 GO:0098590 GO:0098657 GO:0098805 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901739 GO:1901741 GO:1990089 GO:1990090 GO:2001135 GO:2001137
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Dynamin_N EF-hand_4 EHD_N

Protein Analysis

546

Amino Acids

61.5

Weight (kDa)

7.66

Isoelectric Point (pI)

30.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EH PF12763 13 - 90 7.7e-12 EH domain
EF-hand_7 PF13499 18 - 78 3e-07 EF-hand domain pair
EHD_N PF16880 163 - 195 1e-15 N-terminal EH-domain containing protein
Dynamin_N PF00350 200 - 360 9.3e-14 Dynamin family
MMR_HSR1 PF01926 200 - 359 1.3e-07 50S ribosome-binding GTPase
GTP_EFTU PF00009 200 - 379 7.9e-06 Elongation factor Tu GTP binding domain
DUF5600 PF18150 435 - 536 2.1e-38 Domain of unknown function (DUF5600)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 154
Acc36I ACCTGC 1 cut(s) 154
AccB7I CCANNNNNTGG 1 cut(s) 785
AccBSI CCGCTC 1 cut(s) 460
AccII CGCG 1 cut(s) 1062
AciI CCGC 4 cut(s) 97, 458, 761, 1060
AclWI GGATC 5 cut(s) 980, 1051, 1189, 1266, 1316
AcoI YGGCCR 1 cut(s) 94
AcsI RAATTY 4 cut(s) 6, 1316, 1463, 1615
AcuI CTGAAG 2 cut(s) 402, 536
AfaI GTAC 2 cut(s) 394, 1068
AfiI CCNNNNNNNGG 3 cut(s) 103, 785, 1141
AflII CTTAAG 1 cut(s) 1516
AgeI ACCGGT 1 cut(s) 537
AhlI ACTAGT 1 cut(s) 659
AjnI CCWGG 4 cut(s) 667, 745, 880, 1477
Alw21I GWGCWC 5 cut(s) 35, 45, 676, 861, 1608
Alw26I GTCTC 3 cut(s) 150, 794, 1505
AlwI GGATC 5 cut(s) 980, 1051, 1189, 1266, 1316
AlwNI CAGNNNCTG 1 cut(s) 514
AoxI GGCC 1 cut(s) 94
ApeKI GCWGC 4 cut(s) 224, 232, 1211, 1337
ApoI RAATTY 4 cut(s) 6, 1316, 1463, 1615
AseI ATTAAT 1 cut(s) 1103
AsiGI ACCGGT 1 cut(s) 537
Asp700I GAANNNNTTC 1 cut(s) 1616
AspS9I GGNCC 4 cut(s) 683, 725, 1131, 1220
AsuC2I CCSGG 2 cut(s) 59, 1601
AsuHPI GGTGA 2 cut(s) 202, 405
AsuII TTCGAA 1 cut(s) 362
AvaII GGWCC 4 cut(s) 683, 725, 1131, 1220
AxyI CCTNAGG 1 cut(s) 1158
BaeI ACNNNNGTAYC 2 cut(s) 384, 417
BanII GRGCYC 2 cut(s) 676, 1608
Bbv12I GWGCWC 5 cut(s) 35, 45, 676, 861, 1608
BbvI GCAGC 4 cut(s) 211, 244, 1198, 1324
BccI CCATC 2 cut(s) 86, 479
BcgI CGANNNNNNTGC 2 cut(s) 203, 237
BciT130I CCWGG 4 cut(s) 669, 747, 882, 1479
BcnI CCSGG 2 cut(s) 59, 1601
BcoDI GTCTC 3 cut(s) 150, 794, 1505
BcuI ACTAGT 1 cut(s) 659
BfaI CTAG 3 cut(s) 236, 660, 1557
BfrI CTTAAG 1 cut(s) 1516
BfuAI ACCTGC 1 cut(s) 154
BglII AGATCT 1 cut(s) 154
BisI GCNGC 5 cut(s) 97, 225, 233, 1212, 1338
BlsI GCNGC 5 cut(s) 98, 226, 234, 1213, 1339
Bme1390I CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
Bme18I GGWCC 4 cut(s) 683, 725, 1131, 1220
BmgT120I GGNCC 4 cut(s) 683, 725, 1131, 1220
BmiI GGNNCC 2 cut(s) 456, 1133
BmrFI CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
BmrI ACTGGG 1 cut(s) 633
BmsI GCATC 3 cut(s) 103, 574, 1371
BmuI ACTGGG 1 cut(s) 633
BpmI CTGGAG 3 cut(s) 915, 954, 1461
Bpu10I CCTNAGC 1 cut(s) 687
Bpu14I TTCGAA 1 cut(s) 362
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 2 cut(s) 59, 1601
Bsa29I ATCGAT 1 cut(s) 1089
BsaI GGTCTC 2 cut(s) 794, 1505
BsaJI CCNNGG 4 cut(s) 594, 746, 1135, 1478
BsaWI WCCGGW 1 cut(s) 537
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 785, 1141
Bse118I RCCGGY 1 cut(s) 537
Bse1I ACTGG 3 cut(s) 628, 937, 1223
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 2 cut(s) 219, 295
BseBI CCWGG 4 cut(s) 669, 747, 882, 1479
BseCI ATCGAT 1 cut(s) 1089
BseDI CCNNGG 4 cut(s) 594, 746, 1135, 1478
BseGI GGATG 1 cut(s) 340
BseLI CCNNNNNNNGG 3 cut(s) 103, 785, 1141
BseMI GCAATG 2 cut(s) 219, 295
BseMII CTCAG 3 cut(s) 27, 678, 1149
BseNI ACTGG 3 cut(s) 628, 937, 1223
BseXI GCAGC 4 cut(s) 211, 244, 1198, 1324
BseYI CCCAGC 1 cut(s) 1585
Bsh1236I CGCG 1 cut(s) 1062
BshFI GGCC 1 cut(s) 96
BshTI ACCGGT 1 cut(s) 537
BshVI ATCGAT 1 cut(s) 1089
BsiHKAI GWGCWC 5 cut(s) 35, 45, 676, 861, 1608
BsiSI CCGG 4 cut(s) 58, 538, 1306, 1601
BslFI GGGAC 1 cut(s) 1117
BslI CCNNNNNNNGG 3 cut(s) 103, 785, 1141
BsmAI GTCTC 3 cut(s) 150, 794, 1505
BsmFI GGGAC 1 cut(s) 1117
BsnI GGCC 1 cut(s) 96
Bso31I GGTCTC 2 cut(s) 794, 1505
Bsp119I TTCGAA 1 cut(s) 362
Bsp1286I GDGCHC 5 cut(s) 35, 45, 676, 861, 1608
Bsp143I GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
Bsp19I CCATGG 1 cut(s) 594
BspACI CCGC 4 cut(s) 97, 458, 761, 1060
BspANI GGCC 1 cut(s) 96
BspCNI CTCAG 3 cut(s) 26, 679, 1150
BspDI ATCGAT 1 cut(s) 1089
BspFNI CGCG 1 cut(s) 1062
BspHI TCATGA 1 cut(s) 1045
BspLI GGNNCC 2 cut(s) 456, 1133
BspMI ACCTGC 1 cut(s) 154
BspPI GGATC 5 cut(s) 980, 1051, 1189, 1266, 1316
BspT104I TTCGAA 1 cut(s) 362
BspTI CTTAAG 1 cut(s) 1516
BspTNI GGTCTC 2 cut(s) 794, 1505
BsrBI CCGCTC 1 cut(s) 460
BsrDI GCAATG 2 cut(s) 219, 295
BsrFI RCCGGY 1 cut(s) 537
BsrI ACTGG 3 cut(s) 628, 937, 1223
BssAI RCCGGY 1 cut(s) 537
BssECI CCNNGG 4 cut(s) 594, 746, 1135, 1478
BssMI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
BssT1I CCWWGG 1 cut(s) 594
Bst2UI CCWGG 4 cut(s) 669, 747, 882, 1479
Bst4CI ACNGT 1 cut(s) 575
Bst6I CTCTTC 1 cut(s) 488
BstAFI CTTAAG 1 cut(s) 1516
BstBI TTCGAA 1 cut(s) 362
BstC8I GCNNGC 3 cut(s) 768, 1329, 1386
BstDEI CTNAG 5 cut(s) 13, 687, 1158, 1287, 1404
BstDSI CCRYGG 1 cut(s) 594
BstENI CCTNNNNNAGG 1 cut(s) 1139
BstF5I GGATG 1 cut(s) 340
BstFNI CGCG 1 cut(s) 1062
BstKTI GATC 9 cut(s) 24, 157, 988, 1059, 1084, 1184, 1261, 1303, 1311
BstMAI GTCTC 3 cut(s) 150, 794, 1505
BstMBI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
BstMWI GCNNNNNNNGC 2 cut(s) 767, 1337
BstNI CCWGG 4 cut(s) 669, 747, 882, 1479
BstNSI RCATGY 4 cut(s) 136, 778, 1352, 1585
BstSCI CCNGG 6 cut(s) 57, 667, 745, 880, 1477, 1599
BstUI CGCG 1 cut(s) 1062
BstV1I GCAGC 4 cut(s) 211, 244, 1198, 1324
BstX2I RGATCY 3 cut(s) 154, 1056, 1258
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 3 cut(s) 154, 1056, 1258
Bsu15I ATCGAT 1 cut(s) 1089
Bsu36I CCTNAGG 1 cut(s) 1158
BsuRI GGCC 1 cut(s) 96
BsuTUI ATCGAT 1 cut(s) 1089
BtgI CCRYGG 1 cut(s) 594
BtsCI GGATG 1 cut(s) 340
BtsIMutI CAGTG 2 cut(s) 580, 621
BveI ACCTGC 1 cut(s) 154
Cac8I GCNNGC 3 cut(s) 768, 1329, 1386
CaiI CAGNNNCTG 1 cut(s) 514
CciI TCATGA 1 cut(s) 1045
Cfr10I RCCGGY 1 cut(s) 537
Cfr13I GGNCC 4 cut(s) 683, 725, 1131, 1220
ClaI ATCGAT 1 cut(s) 1089
Csp6I GTAC 2 cut(s) 393, 1067
CspAI ACCGGT 1 cut(s) 537
CspCI CAANNNNNGTGG 2 cut(s) 831, 866
CviQI GTAC 2 cut(s) 393, 1067
DdeI CTNAG 5 cut(s) 13, 687, 1158, 1287, 1404
DpnI GATC 9 cut(s) 23, 156, 987, 1058, 1083, 1183, 1260, 1302, 1310
DpnII GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
DraI TTTAAA 1 cut(s) 1447
EaeI YGGCCR 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 488
EarI CTCTTC 1 cut(s) 488
Ecl136II GAGCTC 2 cut(s) 674, 1606
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 2 cut(s) 676, 1608
Eco31I GGTCTC 2 cut(s) 794, 1505
Eco32I GATATC 1 cut(s) 1597
Eco47I GGWCC 4 cut(s) 683, 725, 1131, 1220
Eco53kI GAGCTC 2 cut(s) 674, 1606
Eco57I CTGAAG 2 cut(s) 402, 536
Eco81I CCTNAGG 1 cut(s) 1158
EcoICRI GAGCTC 2 cut(s) 674, 1606
EcoNI CCTNNNNNAGG 1 cut(s) 1139
EcoRII CCWGG 4 cut(s) 667, 745, 880, 1477
EcoRV GATATC 1 cut(s) 1597
EcoT14I CCWWGG 1 cut(s) 594
EcoT38I GRGCYC 2 cut(s) 676, 1608
ErhI CCWWGG 1 cut(s) 594
FalI AAGNNNNNCTT 2 cut(s) 1245, 1277
FaqI GGGAC 1 cut(s) 1117
Fnu4HI GCNGC 5 cut(s) 97, 225, 233, 1212, 1338
FokI GGATG 1 cut(s) 347
FriOI GRGCYC 2 cut(s) 676, 1608
Fsp4HI GCNGC 5 cut(s) 97, 225, 233, 1212, 1338
FspBI CTAG 3 cut(s) 236, 660, 1557
GluI GCNGC 5 cut(s) 97, 225, 233, 1212, 1338
GsaI CCCAGC 1 cut(s) 1589
GsuI CTGGAG 3 cut(s) 915, 954, 1461
HaeIII GGCC 1 cut(s) 96
HapII CCGG 4 cut(s) 58, 538, 1306, 1601
HincII GTYRAC 1 cut(s) 1576
HindII GTYRAC 1 cut(s) 1576
HinfI GANTC 3 cut(s) 80, 182, 1408
HpaII CCGG 4 cut(s) 58, 538, 1306, 1601
HphI GGTGA 2 cut(s) 202, 405
Hpy166II GTNNAC 1 cut(s) 1576
Hpy188I TCNGA 7 cut(s) 21, 85, 1139, 1149, 1270, 1491, 1622
Hpy188III TCNNGA 7 cut(s) 508, 686, 723, 894, 1046, 1157, 1609
Hpy8I GTNNAC 1 cut(s) 1576
HpyAV CCTTC 1 cut(s) 426
HpyCH4III ACNGT 1 cut(s) 575
HpyCH4V TGCA 5 cut(s) 232, 248, 293, 406, 766
HpyF10VI GCNNNNNNNGC 2 cut(s) 767, 1337
HpyF3I CTNAG 5 cut(s) 13, 687, 1158, 1287, 1404
Kzo9I GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
LmnI GCTCC 5 cut(s) 38, 671, 856, 1118, 1603
Lsp1109I GCAGC 4 cut(s) 211, 244, 1198, 1324
LweI GCATC 3 cut(s) 103, 574, 1371
MaeI CTAG 3 cut(s) 236, 660, 1557
MaeIII GTNAC 5 cut(s) 469, 529, 937, 962, 1523
MalI GATC 9 cut(s) 23, 156, 987, 1058, 1083, 1183, 1260, 1302, 1310
MbiI CCGCTC 1 cut(s) 460
MboI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
MboII GAAGA 6 cut(s) 118, 426, 505, 1253, 1448, 1624
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 3 cut(s) 154, 1056, 1258
MhlI GDGCHC 5 cut(s) 35, 45, 676, 861, 1608
MluCI AATT 9 cut(s) 6, 477, 1100, 1316, 1429, 1463, 1502, 1537, 1615
MlyI GAGTC 1 cut(s) 1402
MmeI TCCRAC 2 cut(s) 312, 834
MroXI GAANNNNTTC 1 cut(s) 1616
MseI TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
MslI CAYNNNNRTG 2 cut(s) 599, 1126
MspCI CTTAAG 1 cut(s) 1516
MspI CCGG 4 cut(s) 58, 538, 1306, 1601
MspR9I CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
MunI CAATTG 1 cut(s) 477
MvaI CCWGG 4 cut(s) 669, 747, 882, 1479
MvnI CGCG 1 cut(s) 1062
MwoI GCNNNNNNNGC 2 cut(s) 767, 1337
NciI CCSGG 2 cut(s) 59, 1601
NcoI CCATGG 1 cut(s) 594
NdeII GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
NlaIV GGNNCC 2 cut(s) 456, 1133
NmeAIII GCCGAG 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 962
NspI RCATGY 4 cut(s) 136, 778, 1352, 1585
NspV TTCGAA 1 cut(s) 362
PagI TCATGA 1 cut(s) 1045
PaqCI CACCTGC 1 cut(s) 154
PcsI WCGNNNNNNNCGW 1 cut(s) 913
PdmI GAANNNNTTC 1 cut(s) 1616
PfeI GAWTC 2 cut(s) 80, 182
PflMI CCANNNNNTGG 1 cut(s) 785
PfoI TCCNGGA 2 cut(s) 667, 1599
PinAI ACCGGT 1 cut(s) 537
PkrI GCNGC 5 cut(s) 98, 226, 234, 1213, 1339
PleI GAGTC 1 cut(s) 1402
PpsI GAGTC 1 cut(s) 1402
PshBI ATTAAT 1 cut(s) 1103
Psp124BI GAGCTC 2 cut(s) 676, 1608
Psp6I CCWGG 4 cut(s) 667, 745, 880, 1477
PspFI CCCAGC 1 cut(s) 1585
PspGI CCWGG 4 cut(s) 667, 745, 880, 1477
PspN4I GGNNCC 2 cut(s) 456, 1133
PspPI GGNCC 4 cut(s) 683, 725, 1131, 1220
PstNI CAGNNNCTG 1 cut(s) 514
PsuI RGATCY 3 cut(s) 154, 1056, 1258
RsaI GTAC 2 cut(s) 394, 1068
RsaNI GTAC 2 cut(s) 393, 1067
RseI CAYNNNNRTG 2 cut(s) 599, 1126
SacI GAGCTC 2 cut(s) 676, 1608
SaqAI TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
SatI GCNGC 5 cut(s) 97, 225, 233, 1212, 1338
Sau3AI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
Sau96I GGNCC 4 cut(s) 683, 725, 1131, 1220
SchI GAGTC 1 cut(s) 1402
ScrFI CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
SduI GDGCHC 5 cut(s) 35, 45, 676, 861, 1608
SfaNI GCATC 3 cut(s) 103, 574, 1371
SfuI TTCGAA 1 cut(s) 362
SinI GGWCC 4 cut(s) 683, 725, 1131, 1220
SmiMI CAYNNNNRTG 2 cut(s) 599, 1126
SmlI CTYRAG 2 cut(s) 158, 1516
SmoI CTYRAG 2 cut(s) 158, 1516
SpeI ACTAGT 1 cut(s) 659
Sse9I AATT 9 cut(s) 6, 477, 1100, 1316, 1429, 1463, 1502, 1537, 1615
SsiI CCGC 4 cut(s) 97, 458, 761, 1060
SspMI CTAG 3 cut(s) 236, 660, 1557
SstI GAGCTC 2 cut(s) 676, 1608
StyD4I CCNGG 6 cut(s) 57, 667, 745, 880, 1477, 1599
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 1 cut(s) 575
TaqI TCGA 2 cut(s) 362, 1089
TasI AATT 9 cut(s) 6, 477, 1100, 1316, 1429, 1463, 1502, 1537, 1615
TatI WGTACW 1 cut(s) 1066
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 2 cut(s) 80, 182
Tru1I TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
Tru9I TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
TscAI CASTG 2 cut(s) 580, 628
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 4 cut(s) 224, 232, 1211, 1337
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 6 cut(s) 208, 747, 933, 1020, 1329, 1457
TspRI CASTG 2 cut(s) 580, 628
Van91I CCANNNNNTGG 1 cut(s) 785
Vha464I CTTAAG 1 cut(s) 1516
VpaK11BI GGWCC 4 cut(s) 683, 725, 1131, 1220
VspI ATTAAT 1 cut(s) 1103
XagI CCTNNNNNAGG 1 cut(s) 1139
XapI RAATTY 4 cut(s) 6, 1316, 1463, 1615
XceI RCATGY 4 cut(s) 136, 778, 1352, 1585
XmnI GAANNNNTTC 1 cut(s) 1616
XspI CTAG 3 cut(s) 236, 660, 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.