MD11G1210300.v1.1
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0007671
Physical Location & Seq
Reverse (-)
30769689 .. 30775059
5371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1210300.v1.1.491

Sequence Viewer

Length: 1644 bp
ATGGAAATTTCTTCAGTTCCGATCAGTTCGTGCTCCAAAGAGCATCAGAAAATCTACCAGGAATGGTTTCGATTCGCTGATTCAGACGGTGATGGCCGCATTACCGGGGGCGATGCTATAAAGTTCTTCGGCATGTCCAATCTGAATCGGCAGGATCTCAAGCAGGTTTGGGCCATTGCCGATTCAAAGAGGCAGGGATATCTTGGTTTTAGTGAGTTCGTTGCCGCTATGCAGCTAGTTTCTCTTGCACAAGCTGGACATGACATTACACACGGTTTACAGAATAGCAATGTTGACTTGGAAAGTCTGAAGCCTCCTGTTATGGAGGGTTTGGATTCATTATTATCAGCGAAGAAAAAGCATACGCTCAAGTCAAATGAAAACGAAGTAAATGGAACTGCTGTGGTGCAACAATCACCTTCAGCGCTTTGGTTTTCTTCAAAATCAGCAAAAAAGGTACCGCTTTCTTCTGTGACATCAATTATTGATGGGTTGAAGAGACTGTATGTTCAGAAGCTGAAGCCATTAGAAGTTACTTACAAGTTCAACGATTTTGTGTCCCCCTTACTGACAAATAGTGATTTTGATGCTAAACCCATGGTTATGCTTTTGGGTCAATACTCCACTGGGAAAACAACATTCATTAAACATTTGCTTAAAAGTAGTTATCCAGGAGCTCACATTGGTCCCGAGCCTACAACCGATAGATTTGTTGTTGTTATGTCTGGACCTGATGAAAGAAGTGTTCCTGGGAATACCATTGCTGTCCAAGCTGACATGCCATTTAGCGGTCTCACAACTTTTGGAACAGCATTCTTGTCAAAGTTTGAGTGTTCTCAAATGCCACATTCTCTGCTAGAACACATTACATTTGTGGATACTCCTGGAGTTTTATCCGGAGAGAAGCAACGGACACAACGAGCCTACGATTTTACTGGGGTAACTTCGTGGTTTGCTGCAAAGTGTGACCTCATTCTACTTCTGTTTGATCCTCACAAACTTGATGTCAGTGATGAGTTCAAGCGCGTTATTTCATCTTTACATGGCCATGACGATAAAATTCGTGTTGTTCTGAACAAGGCAGATCAAATTGATACCCAACAATTGATGAGGGTTTATGGAGCATTGATGTGGTCACTTGGGAAGGTTCTTAATACTCCTGAGGTCATGCGAGTTTATATTGGCTCCTTCAATGACAAACCTGTAAATGAGGCTGCTACGGGTCCAGTTGGGAAAGAACTCTTTGAAAAGGAACAGGAGGATCTTCTGGCTGATTTAAAGGATATTCCAAAGAAGGCTTGTGATCGCAGAATCAATGAATTTGTGAAGCGTGCCAGAGCTGCCAAGATACATGCTTACATAATTAGCCATTTAAAGAAGGAGATGCCTGCCATATTGGGGAAAGCTAAGGCTCAACAGAGGCTTATTGATAATTTGGAAGATGAATTTAAAAAGGTTCAGAGGGAGCACCATCTACCTCCAGGGGATTTCCCAGACGTAGACCACTTCAGGGACATCTTGAGTGGTTACAGCATTGACAATTTCGAGAAGTTAAAGCCTAAGATGATAGATGCCGTCGATGAAATGCTGGGTTATGATATCCCAGAACTCTTGAAGAATTTCAGAAATCCATACGACCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0005911 GO:0005929 GO:0006810 GO:0006886 GO:0006897 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0007399 GO:0008104 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009987 GO:0010008 GO:0010033 GO:0010830 GO:0010831 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0020016 GO:0020018 GO:0022008 GO:0022603 GO:0022607 GO:0030030 GO:0030031 GO:0030054 GO:0030154 GO:0030182 GO:0031090 GO:0031175 GO:0031253 GO:0031410 GO:0031901 GO:0031982 GO:0032386 GO:0032388 GO:0032456 GO:0032501 GO:0032502 GO:0032879 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042538 GO:0042886 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044441 GO:0044444 GO:0044446 GO:0044459 GO:0044463 GO:0044464 GO:0044782 GO:0045184 GO:0045595 GO:0045597 GO:0046907 GO:0048468 GO:0048518 GO:0048522 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051094 GO:0051128 GO:0051130 GO:0051147 GO:0051149 GO:0051153 GO:0051155 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051641 GO:0051649 GO:0051716 GO:0055037 GO:0055038 GO:0055044 GO:0060142 GO:0060143 GO:0060170 GO:0060271 GO:0060341 GO:0060627 GO:0061512 GO:0065003 GO:0065007 GO:0070727 GO:0070848 GO:0070887 GO:0070925 GO:0071310 GO:0071363 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0097708 GO:0098588 GO:0098590 GO:0098657 GO:0098805 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901739 GO:1901741 GO:1990089 GO:1990090 GO:2001135 GO:2001137
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Dynamin_N EF-hand_4 EHD_N

Protein Analysis

548

Amino Acids

61.37

Weight (kDa)

6.61

Isoelectric Point (pI)

30.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EH PF12763 14 - 91 5.7e-12 EH domain
EF-hand_7 PF13499 18 - 78 5.6e-07 EF-hand domain pair
EHD_N PF16880 164 - 196 3.3e-16 N-terminal EH-domain containing protein
Dynamin_N PF00350 201 - 361 8.4e-14 Dynamin family
MMR_HSR1 PF01926 201 - 360 1.3e-07 50S ribosome-binding GTPase
DUF5600 PF18150 436 - 537 6.9e-38 Domain of unknown function (DUF5600)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 154
Acc65I GGTACC 1 cut(s) 457
AccB1I GGYRCC 1 cut(s) 457
AccI GTMKAC 1 cut(s) 1500
AccII CGCG 1 cut(s) 1026
AccIII TCCGGA 1 cut(s) 896
AciI CCGC 4 cut(s) 97, 225, 461, 789
AclWI GGATC 3 cut(s) 162, 983, 1269
AcoI YGGCCR 2 cut(s) 94, 1045
AcsI RAATTY 5 cut(s) 6, 1059, 1319, 1445, 1618
AcuI CTGAAG 4 cut(s) 329, 405, 539, 1492
AfaI GTAC 1 cut(s) 459
AfeI AGCGCT 1 cut(s) 426
AfiI CCNNNNNNNGG 3 cut(s) 788, 1398, 1510
AgsI TTSAA 8 cut(s) 186, 441, 496, 547, 1021, 1192, 1247, 1615
AjnI CCWGG 5 cut(s) 57, 670, 748, 883, 1480
AluBI AGCT 7 cut(s) 235, 254, 517, 677, 773, 1340, 1406
AluI AGCT 7 cut(s) 235, 254, 517, 677, 773, 1340, 1406
Alw21I GWGCWC 3 cut(s) 35, 679, 1470
Alw26I GTCTC 2 cut(s) 493, 797
AlwI GGATC 3 cut(s) 162, 983, 1269
AlwNI CAGNNNCTG 1 cut(s) 517
Ama87I CYCGRG 1 cut(s) 689
Aor13HI TCCGGA 1 cut(s) 896
Aor51HI AGCGCT 1 cut(s) 426
AoxI GGCC 3 cut(s) 94, 171, 1045
ApeKI GCWGC 4 cut(s) 232, 956, 1214, 1340
ApoI RAATTY 5 cut(s) 6, 1059, 1319, 1445, 1618
ArsI GACNNNNNNTTYG 2 cut(s) 990, 1022
Asp700I GAANNNNTTC 2 cut(s) 66, 1619
Asp718I GGTACC 1 cut(s) 457
AspLEI GCGC 2 cut(s) 427, 1026
AspS9I GGNCC 4 cut(s) 171, 686, 728, 1223
AsuC2I CCSGG 1 cut(s) 106
AsuHPI GGTGA 2 cut(s) 101, 408
AvaI CYCGRG 1 cut(s) 689
AvaII GGWCC 3 cut(s) 686, 728, 1223
AxyI CCTNAGG 1 cut(s) 1161
BalI TGGCCA 1 cut(s) 1047
BanI GGYRCC 1 cut(s) 457
BanII GRGCYC 1 cut(s) 679
Bbv12I GWGCWC 3 cut(s) 35, 679, 1470
BbvI GCAGC 4 cut(s) 244, 943, 1201, 1327
BccI CCATC 3 cut(s) 86, 482, 1479
BceAI ACGGC 1 cut(s) 1559
BciT130I CCWGG 5 cut(s) 59, 672, 750, 885, 1482
BciVI GTATCC 1 cut(s) 871
BcnI CCSGG 1 cut(s) 106
BcoDI GTCTC 2 cut(s) 493, 797
BfaI CTAG 2 cut(s) 236, 857
BfoI RGCGCY 1 cut(s) 428
BfuAI ACCTGC 1 cut(s) 154
BfuI GTATCC 1 cut(s) 871
BisI GCNGC 6 cut(s) 97, 225, 233, 957, 1215, 1341
BlsI GCNGC 6 cut(s) 98, 226, 234, 958, 1216, 1342
Bme1390I CCNGG 6 cut(s) 59, 106, 672, 750, 885, 1482
Bme18I GGWCC 3 cut(s) 686, 728, 1223
BmeT110I CYCGRG 1 cut(s) 689
BmgT120I GGNCC 4 cut(s) 171, 686, 728, 1223
BmiI GGNNCC 4 cut(s) 459, 688, 1186, 1224
BmrFI CCNGG 6 cut(s) 59, 106, 672, 750, 885, 1482
BmrI ACTGGG 2 cut(s) 636, 945
BmsI GCATC 5 cut(s) 52, 103, 577, 1374, 1561
BmuI ACTGGG 2 cut(s) 636, 945
BpmI CTGGAG 2 cut(s) 906, 1464
Bpu10I CCTNAGC 1 cut(s) 1407
BpuEI CTTGAG 3 cut(s) 143, 353, 1540
BpuMI CCSGG 1 cut(s) 106
BsaI GGTCTC 1 cut(s) 797
BsaJI CCNNGG 4 cut(s) 105, 597, 749, 1481
BsaWI WCCGGW 1 cut(s) 896
Bsc4I CCNNNNNNNGG 3 cut(s) 788, 1398, 1510
Bse1I ACTGG 3 cut(s) 631, 940, 1226
Bse21I CCTNAGG 1 cut(s) 1161
Bse3DI GCAATG 3 cut(s) 174, 295, 759
BseAI TCCGGA 1 cut(s) 896
BseBI CCWGG 5 cut(s) 59, 672, 750, 885, 1482
BseDI CCNNGG 4 cut(s) 105, 597, 749, 1481
BseLI CCNNNNNNNGG 3 cut(s) 788, 1398, 1510
BseMI GCAATG 3 cut(s) 174, 295, 759
BseMII CTCAG 1 cut(s) 1152
BseNI ACTGG 3 cut(s) 631, 940, 1226
BseXI GCAGC 4 cut(s) 244, 943, 1201, 1327
BseYI CCCAGC 1 cut(s) 1588
Bsh1236I CGCG 1 cut(s) 1026
BshFI GGCC 3 cut(s) 96, 173, 1047
BshNI GGYRCC 1 cut(s) 457
BsiHKAI GWGCWC 3 cut(s) 35, 679, 1470
BsiHKCI CYCGRG 1 cut(s) 689
BsiSI CCGG 2 cut(s) 105, 897
BslFI GGGAC 3 cut(s) 544, 672, 1526
BslI CCNNNNNNNGG 3 cut(s) 788, 1398, 1510
BsmAI GTCTC 2 cut(s) 493, 797
BsmFI GGGAC 3 cut(s) 544, 672, 1526
BsmI GAATGC 1 cut(s) 812
BsnI GGCC 3 cut(s) 96, 173, 1047
Bso31I GGTCTC 1 cut(s) 797
BsoBI CYCGRG 1 cut(s) 689
Bsp1286I GDGCHC 3 cut(s) 35, 679, 1470
Bsp13I TCCGGA 1 cut(s) 896
Bsp143I GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
Bsp19I CCATGG 1 cut(s) 597
BspACI CCGC 4 cut(s) 97, 225, 461, 789
BspANI GGCC 3 cut(s) 96, 173, 1047
BspCNI CTCAG 1 cut(s) 1153
BspEI TCCGGA 1 cut(s) 896
BspFNI CGCG 1 cut(s) 1026
BspLI GGNNCC 4 cut(s) 459, 688, 1186, 1224
BspMI ACCTGC 1 cut(s) 154
BspPI GGATC 3 cut(s) 162, 983, 1269
BspT107I GGYRCC 1 cut(s) 457
BspTNI GGTCTC 1 cut(s) 797
BsrDI GCAATG 3 cut(s) 174, 295, 759
BsrI ACTGG 3 cut(s) 631, 940, 1226
BssECI CCNNGG 4 cut(s) 105, 597, 749, 1481
BssMI GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
BssT1I CCWWGG 1 cut(s) 597
Bst2UI CCWGG 5 cut(s) 59, 672, 750, 885, 1482
Bst4CI ACNGT 3 cut(s) 89, 275, 504
Bst6I CTCTTC 1 cut(s) 491
BstC8I GCNNGC 2 cut(s) 1332, 1389
BstDEI CTNAG 3 cut(s) 1161, 1407, 1560
BstDSI CCRYGG 1 cut(s) 597
BstFNI CGCG 1 cut(s) 1026
BstH2I RGCGCY 1 cut(s) 428
BstHHI GCGC 2 cut(s) 427, 1026
BstKTI GATC 6 cut(s) 24, 157, 991, 1087, 1264, 1306
BstMAI GTCTC 2 cut(s) 493, 797
BstMBI GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
BstMWI GCNNNNNNNGC 2 cut(s) 770, 1340
BstNI CCWGG 5 cut(s) 59, 672, 750, 885, 1482
BstNSI RCATGY 3 cut(s) 136, 781, 1355
BstSCI CCNGG 6 cut(s) 57, 104, 670, 748, 883, 1480
BstUI CGCG 1 cut(s) 1026
BstV1I GCAGC 4 cut(s) 244, 943, 1201, 1327
BstX2I RGATCY 2 cut(s) 154, 1261
BstYI RGATCY 2 cut(s) 154, 1261
Bsu36I CCTNAGG 1 cut(s) 1161
BsuI GTATCC 1 cut(s) 871
BsuRI GGCC 3 cut(s) 96, 173, 1047
BtgI CCRYGG 1 cut(s) 597
BtgZI GCGATG 1 cut(s) 126
BtsIMutI CAGTG 2 cut(s) 624, 1015
BveI ACCTGC 1 cut(s) 154
Cac8I GCNNGC 2 cut(s) 1332, 1389
CaiI CAGNNNCTG 1 cut(s) 517
CfoI GCGC 2 cut(s) 427, 1026
Cfr13I GGNCC 4 cut(s) 171, 686, 728, 1223
Csp6I GTAC 1 cut(s) 458
CviAII CATG 8 cut(s) 133, 260, 598, 778, 1043, 1049, 1168, 1352
CviQI GTAC 1 cut(s) 458
DdeI CTNAG 3 cut(s) 1161, 1407, 1560
DpnI GATC 6 cut(s) 23, 156, 990, 1086, 1263, 1305
DpnII GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
DraI TTTAAA 3 cut(s) 1278, 1374, 1450
EaeI YGGCCR 2 cut(s) 94, 1045
Eam1104I CTCTTC 1 cut(s) 491
EarI CTCTTC 1 cut(s) 491
Ecl136II GAGCTC 1 cut(s) 677
Eco130I CCWWGG 1 cut(s) 597
Eco24I GRGCYC 1 cut(s) 679
Eco31I GGTCTC 1 cut(s) 797
Eco32I GATATC 2 cut(s) 200, 1600
Eco47I GGWCC 3 cut(s) 686, 728, 1223
Eco47III AGCGCT 1 cut(s) 426
Eco53kI GAGCTC 1 cut(s) 677
Eco57I CTGAAG 4 cut(s) 329, 405, 539, 1492
Eco81I CCTNAGG 1 cut(s) 1161
Eco88I CYCGRG 1 cut(s) 689
EcoICRI GAGCTC 1 cut(s) 677
EcoRII CCWGG 5 cut(s) 57, 670, 748, 883, 1480
EcoRV GATATC 2 cut(s) 200, 1600
EcoT14I CCWWGG 1 cut(s) 597
EcoT38I GRGCYC 1 cut(s) 679
ErhI CCWWGG 1 cut(s) 597
FaeI CATG 8 cut(s) 136, 263, 601, 781, 1046, 1052, 1171, 1355
FaqI GGGAC 3 cut(s) 544, 672, 1526
FatI CATG 8 cut(s) 132, 259, 597, 777, 1042, 1048, 1167, 1351
FblI GTMKAC 1 cut(s) 1500
Fnu4HI GCNGC 6 cut(s) 97, 225, 233, 957, 1215, 1341
FriOI GRGCYC 1 cut(s) 679
Fsp4HI GCNGC 6 cut(s) 97, 225, 233, 957, 1215, 1341
FspBI CTAG 2 cut(s) 236, 857
GlaI GCGC 2 cut(s) 426, 1025
GluI GCNGC 6 cut(s) 97, 225, 233, 957, 1215, 1341
GsaI CCCAGC 1 cut(s) 1592
GsuI CTGGAG 2 cut(s) 906, 1464
HaeII RGCGCY 1 cut(s) 428
HaeIII GGCC 3 cut(s) 96, 173, 1047
HapII CCGG 2 cut(s) 105, 897
HhaI GCGC 2 cut(s) 427, 1026
Hin1II CATG 8 cut(s) 136, 263, 601, 781, 1046, 1052, 1171, 1355
Hin6I GCGC 2 cut(s) 425, 1024
HinP1I GCGC 2 cut(s) 425, 1024
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 6 cut(s) 72, 80, 145, 182, 335, 1311
HpaII CCGG 2 cut(s) 105, 897
HphI GGTGA 2 cut(s) 101, 408
Hpy166II GTNNAC 3 cut(s) 278, 295, 1501
Hpy188I TCNGA 9 cut(s) 21, 48, 85, 144, 309, 513, 1074, 1461, 1625
Hpy188III TCNNGA 7 cut(s) 689, 726, 897, 1160, 1519, 1546, 1612
Hpy8I GTNNAC 3 cut(s) 278, 295, 1501
Hpy99I CGWCG 1 cut(s) 1580
HpyAV CCTTC 5 cut(s) 429, 1138, 1198, 1288, 1372
HpyCH4III ACNGT 3 cut(s) 89, 275, 504
HpyCH4IV ACGT 1 cut(s) 1497
HpyCH4V TGCA 4 cut(s) 232, 248, 409, 959
HpyF10VI GCNNNNNNNGC 2 cut(s) 770, 1340
HpyF3I CTNAG 3 cut(s) 1161, 1407, 1560
HpySE526I ACGT 1 cut(s) 1497
Hsp92II CATG 8 cut(s) 136, 263, 601, 781, 1046, 1052, 1171, 1355
HspAI GCGC 2 cut(s) 425, 1024
Kpn2I TCCGGA 1 cut(s) 896
KpnI GGTACC 1 cut(s) 461
Kzo9I GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
LmnI GCTCC 5 cut(s) 38, 674, 1121, 1190, 1465
Lsp1109I GCAGC 4 cut(s) 244, 943, 1201, 1327
LweI GCATC 5 cut(s) 52, 103, 577, 1374, 1561
MaeI CTAG 2 cut(s) 236, 857
MaeII ACGT 1 cut(s) 1497
MaeIII GTNAC 6 cut(s) 472, 532, 940, 965, 1134, 1526
MalI GATC 6 cut(s) 23, 156, 990, 1086, 1263, 1305
MboI GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
MboII GAAGA 9 cut(s) 3, 118, 364, 429, 459, 508, 1256, 1451, 1627
MfeI CAATTG 1 cut(s) 1103
MflI RGATCY 2 cut(s) 154, 1261
MhlI GDGCHC 3 cut(s) 35, 679, 1470
MlsI TGGCCA 1 cut(s) 1047
MluNI TGGCCA 1 cut(s) 1047
Mox20I TGGCCA 1 cut(s) 1047
MroI TCCGGA 1 cut(s) 896
MroXI GAANNNNTTC 2 cut(s) 66, 1619
MscI TGGCCA 1 cut(s) 1047
MseI TTAA 7 cut(s) 645, 657, 1152, 1277, 1373, 1449, 1553
MslI CAYNNNNRTG 3 cut(s) 602, 1047, 1129
Msp20I TGGCCA 1 cut(s) 1047
MspI CCGG 2 cut(s) 105, 897
MspR9I CCNGG 6 cut(s) 59, 106, 672, 750, 885, 1482
MunI CAATTG 1 cut(s) 1103
Mva1269I GAATGC 1 cut(s) 812
MvaI CCWGG 5 cut(s) 59, 672, 750, 885, 1482
MvnI CGCG 1 cut(s) 1026
MwoI GCNNNNNNNGC 2 cut(s) 770, 1340
NciI CCSGG 1 cut(s) 106
NcoI CCATGG 1 cut(s) 597
NdeII GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
NlaIII CATG 8 cut(s) 136, 263, 601, 781, 1046, 1052, 1171, 1355
NlaIV GGNNCC 4 cut(s) 459, 688, 1186, 1224
NmuCI GTSAC 3 cut(s) 472, 965, 1134
NspI RCATGY 3 cut(s) 136, 781, 1355
PcsI WCGNNNNNNNCGW 1 cut(s) 916
PctI GAATGC 1 cut(s) 812
PdmI GAANNNNTTC 2 cut(s) 66, 1619
PfeI GAWTC 6 cut(s) 72, 80, 145, 182, 335, 1311
PfoI TCCNGGA 2 cut(s) 670, 883
PkrI GCNGC 6 cut(s) 98, 226, 234, 958, 1216, 1342
Psp124BI GAGCTC 1 cut(s) 679
Psp6I CCWGG 5 cut(s) 57, 670, 748, 883, 1480
PspFI CCCAGC 1 cut(s) 1588
PspGI CCWGG 5 cut(s) 57, 670, 748, 883, 1480
PspN4I GGNNCC 4 cut(s) 459, 688, 1186, 1224
PspPI GGNCC 4 cut(s) 171, 686, 728, 1223
PstNI CAGNNNCTG 1 cut(s) 517
PsuI RGATCY 2 cut(s) 154, 1261
RsaI GTAC 1 cut(s) 459
RsaNI GTAC 1 cut(s) 458
RseI CAYNNNNRTG 3 cut(s) 602, 1047, 1129
SacI GAGCTC 1 cut(s) 679
SaqAI TTAA 7 cut(s) 645, 657, 1152, 1277, 1373, 1449, 1553
SatI GCNGC 6 cut(s) 97, 225, 233, 957, 1215, 1341
Sau3AI GATC 6 cut(s) 21, 154, 988, 1084, 1261, 1303
Sau96I GGNCC 4 cut(s) 171, 686, 728, 1223
ScrFI CCNGG 6 cut(s) 59, 106, 672, 750, 885, 1482
SduI GDGCHC 3 cut(s) 35, 679, 1470
SfaNI GCATC 5 cut(s) 52, 103, 577, 1374, 1561
SinI GGWCC 3 cut(s) 686, 728, 1223
SmiMI CAYNNNNRTG 3 cut(s) 602, 1047, 1129
SmlI CTYRAG 3 cut(s) 158, 368, 1519
SmoI CTYRAG 3 cut(s) 158, 368, 1519
SsiI CCGC 4 cut(s) 97, 225, 461, 789
SspMI CTAG 2 cut(s) 236, 857
SstI GAGCTC 1 cut(s) 679
StyD4I CCNGG 6 cut(s) 57, 104, 670, 748, 883, 1480
StyI CCWWGG 1 cut(s) 597
TaaI ACNGT 3 cut(s) 89, 275, 504
TaiI ACGT 1 cut(s) 1500
TaqI TCGA 3 cut(s) 70, 1545, 1578
TauI GCSGC 2 cut(s) 99, 227
TfiI GAWTC 6 cut(s) 72, 80, 145, 182, 335, 1311
Tru1I TTAA 7 cut(s) 645, 657, 1152, 1277, 1373, 1449, 1553
Tru9I TTAA 7 cut(s) 645, 657, 1152, 1277, 1373, 1449, 1553
TscAI CASTG 2 cut(s) 631, 1015
TseFI GTSAC 3 cut(s) 472, 965, 1134
TseI GCWGC 4 cut(s) 232, 956, 1214, 1340
Tsp45I GTSAC 3 cut(s) 472, 965, 1134
TspDTI ATGAA 8 cut(s) 327, 393, 631, 750, 1023, 1332, 1458, 1596
TspGWI ACGGA 1 cut(s) 925
TspRI CASTG 2 cut(s) 631, 1015
VpaK11BI GGWCC 3 cut(s) 686, 728, 1223
XapI RAATTY 5 cut(s) 6, 1059, 1319, 1445, 1618
XceI RCATGY 3 cut(s) 136, 781, 1355
XmiI GTMKAC 1 cut(s) 1500
XmnI GAANNNNTTC 2 cut(s) 66, 1619
XspI CTAG 2 cut(s) 236, 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.