Rh5DG291000
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0007671
Physical Location & Seq
Forward (+)
36380455 .. 36386042
5588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG291000.1

Sequence Viewer

Length: 1638 bp
ATGGAAATTTCCTCAGTTCCGATCAGTTCGTGCTCCAAAGAGCACCAGAAAATCTACCGGGAGTGGTTTCAGTCAGCAGATTCAGATAATGATGGCCGCATTACGGGGAGTGATGCTATTAAGTTCTTCGGCATGTCCAATCTGTCTCGGCAAGATCTCAAGCAGGTGTGGGCGATTACCGATTCAAAGAGGCAGGGTTTTCTCGGTTTCACTGAGTTCATTACTGCTATGCAGCTAGTTTCTCTTGCACAAGCTGGACATGAGATTACAAATGATTTATTGACCAGCAATGCAGACTTGGAGAACTTGAAACCTCCTGTCATGGAGGGGTTGGATGTGTTATTAGCGAAAAAAAAGCGTTCGAACAAGACAAATGAGAACGAAGTAAATGGTACTCCTGTGGTGCAACAATCACCTTCAGCACTTTGGTTTTCTTCAAAATCAGCAAAAAAGGTTCCGCTCTCTGCTGTAACATCAATTGTTGATGGGTTGAAGAGATTATATATCCAGAAGCTGAAACCATTAGAAGTTACTTACCGGTTTAATGATTTTGTATCTCCATTACTGACAAACAGTGATTTTGATGCCAAACCCATGGTTATGCTTTTGGGTCAATACTCCACTGGGAAAACAACATTTATTAAACATTTGCTTAAAACTAGTTATCCAGGAGCTCACATTGGTCCTGAGCCTACAACAGATAGATTTGTTGTTGTTATGTCTGGACCTGATGAAAGAAGTGTTCCTGGGAATACTATTGCGGTGCAAGCTGACATGCCATTTAGTGGTCTCACATCTTTTGGAACATCATTCTTGTCAAAGTTTGAGTGTTCCCAAATGCCACATTCTTTGTTGGAGCACATCACATTTGTAGATACTCCTGGCGTTTTATCTGGAGAGAAGCAACGAACCCAACGGGCCTATGATTTTACTGGAGTAACTTCATGGTTCGCTTCAAAGTGTGACCTCATTCTACTTTTGTTTGATCCTCACAAACTTGATGTGAGTGATGAGTTCAAGCGTGTGATTTCATCTTTGCGTGGTCATGACGATAAGATCCGCGTTGTACTCAATAAGGCAGATCAAATCGATACCCAACAATTAATGAGGGTTTATGGAGCATTGATGTGGTCCCTCGGAAAGGTTCTGAATACTCCTGAGGTCATGCGAGTTTATATTGGATCATTCAATGACAAACCTGTAAATGAGGCTGCTTCTGGTCCAGTAGGGAAAGAACTCTTTGAGAGAGAACAAGAGGATCTTCTTTCTGACTTAAAGGATATTCCTAAGAAGTCTTGTGATCGCCGGATCAATGAATTTGTTAAGCGTGCCAGAGCTGCCAAGATACATGCTTACATTATCAGCCATTTGAGAAAAGAGATGCCTGCTTTGATTGGGAAAGCTAAGACTCAAAAGAAACTTACTGATAATTTGGAAGATGAGTTTAAAAAGGTTCAAAGGGAATTTCATCTACCTCCAGGGGATTTTCCGAATGTTGAGCAATTCAGGGAGACCTTAAGTGGTTACAGCTTTGACAATTTCGAGAAGTTGAAGCCTAGTATGATAAAAGCAGTTGACGACATGCTGGGTTATGATATCCCGGAGCTTTTGAAGAATTTCAGAAATCCATACGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0005911 GO:0005929 GO:0006810 GO:0006886 GO:0006897 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007275 GO:0007399 GO:0008104 GO:0008150 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009987 GO:0010008 GO:0010033 GO:0010830 GO:0010831 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0020016 GO:0020018 GO:0022008 GO:0022603 GO:0022607 GO:0030030 GO:0030031 GO:0030054 GO:0030154 GO:0030182 GO:0031090 GO:0031175 GO:0031253 GO:0031410 GO:0031901 GO:0031982 GO:0032386 GO:0032388 GO:0032456 GO:0032501 GO:0032502 GO:0032879 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042538 GO:0042886 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044441 GO:0044444 GO:0044446 GO:0044459 GO:0044463 GO:0044464 GO:0044782 GO:0045184 GO:0045595 GO:0045597 GO:0046907 GO:0048468 GO:0048518 GO:0048522 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051094 GO:0051128 GO:0051130 GO:0051147 GO:0051149 GO:0051153 GO:0051155 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0051641 GO:0051649 GO:0051716 GO:0055037 GO:0055038 GO:0055044 GO:0060142 GO:0060143 GO:0060170 GO:0060271 GO:0060341 GO:0060627 GO:0061512 GO:0065003 GO:0065007 GO:0070727 GO:0070848 GO:0070887 GO:0070925 GO:0071310 GO:0071363 GO:0071495 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0097708 GO:0098588 GO:0098590 GO:0098657 GO:0098805 GO:0120025 GO:0120031 GO:0120036 GO:0120038 GO:1901739 GO:1901741 GO:1990089 GO:1990090 GO:2001135 GO:2001137
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Dynamin_N EF-hand_4 EHD_N

Protein Analysis

545

Amino Acids

61.44

Weight (kDa)

7.66

Isoelectric Point (pI)

31.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EH PF12763 13 - 90 2.1e-12 EH domain
EF-hand_7 PF13499 18 - 78 8.5e-08 EF-hand domain pair
EHD_N PF16880 163 - 195 1e-15 N-terminal EH-domain containing protein
Dynamin_N PF00350 200 - 360 9.3e-14 Dynamin family
MMR_HSR1 PF01926 200 - 359 1.3e-07 50S ribosome-binding GTPase
GTP_EFTU PF00009 200 - 389 7.9e-06 Elongation factor Tu GTP binding domain
DUF5600 PF18150 435 - 536 1.3e-38 Domain of unknown function (DUF5600)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 154
Acc36I ACCTGC 1 cut(s) 154
AccB7I CCANNNNNTGG 1 cut(s) 785
AccBSI CCGCTC 1 cut(s) 460
AccII CGCG 1 cut(s) 1062
AciI CCGC 4 cut(s) 97, 458, 761, 1060
AclWI GGATC 5 cut(s) 980, 1051, 1189, 1266, 1316
AcoI YGGCCR 1 cut(s) 94
AcsI RAATTY 4 cut(s) 6, 1316, 1463, 1615
AcuI CTGAAG 1 cut(s) 402
AfaI GTAC 2 cut(s) 394, 1068
AfiI CCNNNNNNNGG 3 cut(s) 103, 785, 1141
AflII CTTAAG 1 cut(s) 1516
AgeI ACCGGT 1 cut(s) 537
AhlI ACTAGT 1 cut(s) 659
AjnI CCWGG 4 cut(s) 667, 745, 880, 1477
AluBI AGCT 9 cut(s) 235, 254, 514, 674, 770, 1337, 1403, 1530, 1606
AluI AGCT 9 cut(s) 235, 254, 514, 674, 770, 1337, 1403, 1530, 1606
Alw21I GWGCWC 4 cut(s) 35, 45, 676, 861
Alw26I GTCTC 3 cut(s) 150, 794, 1505
AlwI GGATC 5 cut(s) 980, 1051, 1189, 1266, 1316
AlwNI CAGNNNCTG 1 cut(s) 514
AoxI GGCC 2 cut(s) 94, 918
ApeKI GCWGC 3 cut(s) 232, 1211, 1337
ApoI RAATTY 4 cut(s) 6, 1316, 1463, 1615
AseI ATTAAT 1 cut(s) 1103
AsiGI ACCGGT 1 cut(s) 537
Asp700I GAANNNNTTC 1 cut(s) 1616
AspS9I GGNCC 5 cut(s) 683, 725, 918, 1131, 1220
AsuC2I CCSGG 2 cut(s) 59, 1601
AsuHPI GGTGA 1 cut(s) 405
AsuII TTCGAA 1 cut(s) 362
AvaII GGWCC 4 cut(s) 683, 725, 1131, 1220
AxyI CCTNAGG 1 cut(s) 1158
BaeI ACNNNNGTAYC 2 cut(s) 384, 417
BanII GRGCYC 1 cut(s) 676
Bbv12I GWGCWC 4 cut(s) 35, 45, 676, 861
BbvI GCAGC 3 cut(s) 244, 1198, 1324
BccI CCATC 2 cut(s) 86, 479
BciT130I CCWGG 4 cut(s) 669, 747, 882, 1479
BcnI CCSGG 2 cut(s) 59, 1601
BcoDI GTCTC 3 cut(s) 150, 794, 1505
BcuI ACTAGT 1 cut(s) 659
BfaI CTAG 3 cut(s) 236, 660, 1557
BfrI CTTAAG 1 cut(s) 1516
BfuAI ACCTGC 1 cut(s) 154
BglII AGATCT 1 cut(s) 154
BisI GCNGC 4 cut(s) 97, 233, 1212, 1338
BlsI GCNGC 4 cut(s) 98, 234, 1213, 1339
Bme1390I CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
Bme18I GGWCC 4 cut(s) 683, 725, 1131, 1220
BmgT120I GGNCC 5 cut(s) 683, 725, 918, 1131, 1220
BmiI GGNNCC 2 cut(s) 456, 1133
BmrFI CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
BmrI ACTGGG 1 cut(s) 633
BmsI GCATC 3 cut(s) 103, 574, 1371
BmuI ACTGGG 1 cut(s) 633
BpmI CTGGAG 3 cut(s) 915, 954, 1461
Bpu10I CCTNAGC 1 cut(s) 687
Bpu14I TTCGAA 1 cut(s) 362
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 2 cut(s) 59, 1601
Bsa29I ATCGAT 1 cut(s) 1089
BsaI GGTCTC 2 cut(s) 794, 1505
BsaJI CCNNGG 4 cut(s) 594, 746, 1135, 1478
BsaWI WCCGGW 1 cut(s) 537
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 785, 1141
Bse118I RCCGGY 1 cut(s) 537
Bse1I ACTGG 3 cut(s) 628, 937, 1223
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 1 cut(s) 295
BseBI CCWGG 4 cut(s) 669, 747, 882, 1479
BseCI ATCGAT 1 cut(s) 1089
BseDI CCNNGG 4 cut(s) 594, 746, 1135, 1478
BseGI GGATG 1 cut(s) 340
BseLI CCNNNNNNNGG 3 cut(s) 103, 785, 1141
BseMI GCAATG 1 cut(s) 295
BseMII CTCAG 4 cut(s) 27, 204, 678, 1149
BseNI ACTGG 3 cut(s) 628, 937, 1223
BseXI GCAGC 3 cut(s) 244, 1198, 1324
BseYI CCCAGC 1 cut(s) 1585
Bsh1236I CGCG 1 cut(s) 1062
BshFI GGCC 2 cut(s) 96, 920
BshTI ACCGGT 1 cut(s) 537
BshVI ATCGAT 1 cut(s) 1089
BsiHKAI GWGCWC 4 cut(s) 35, 45, 676, 861
BsiSI CCGG 4 cut(s) 58, 538, 1306, 1601
BslFI GGGAC 1 cut(s) 1117
BslI CCNNNNNNNGG 3 cut(s) 103, 785, 1141
BsmAI GTCTC 3 cut(s) 150, 794, 1505
BsmFI GGGAC 1 cut(s) 1117
BsnI GGCC 2 cut(s) 96, 920
Bso31I GGTCTC 2 cut(s) 794, 1505
Bsp119I TTCGAA 1 cut(s) 362
Bsp1286I GDGCHC 4 cut(s) 35, 45, 676, 861
Bsp143I GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
Bsp19I CCATGG 1 cut(s) 594
BspACI CCGC 4 cut(s) 97, 458, 761, 1060
BspANI GGCC 2 cut(s) 96, 920
BspCNI CTCAG 4 cut(s) 26, 205, 679, 1150
BspDI ATCGAT 1 cut(s) 1089
BspFNI CGCG 1 cut(s) 1062
BspHI TCATGA 1 cut(s) 1045
BspLI GGNNCC 2 cut(s) 456, 1133
BspMI ACCTGC 1 cut(s) 154
BspPI GGATC 5 cut(s) 980, 1051, 1189, 1266, 1316
BspT104I TTCGAA 1 cut(s) 362
BspTI CTTAAG 1 cut(s) 1516
BspTNI GGTCTC 2 cut(s) 794, 1505
BsrBI CCGCTC 1 cut(s) 460
BsrDI GCAATG 1 cut(s) 295
BsrFI RCCGGY 1 cut(s) 537
BsrI ACTGG 3 cut(s) 628, 937, 1223
BssAI RCCGGY 1 cut(s) 537
BssECI CCNNGG 4 cut(s) 594, 746, 1135, 1478
BssMI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
BssT1I CCWWGG 1 cut(s) 594
Bst2UI CCWGG 4 cut(s) 669, 747, 882, 1479
Bst4CI ACNGT 1 cut(s) 575
Bst6I CTCTTC 1 cut(s) 488
BstAFI CTTAAG 1 cut(s) 1516
BstBI TTCGAA 1 cut(s) 362
BstC8I GCNNGC 3 cut(s) 768, 1329, 1386
BstDEI CTNAG 6 cut(s) 13, 213, 687, 1158, 1287, 1404
BstDSI CCRYGG 1 cut(s) 594
BstENI CCTNNNNNAGG 1 cut(s) 1139
BstF5I GGATG 1 cut(s) 340
BstFNI CGCG 1 cut(s) 1062
BstKTI GATC 9 cut(s) 24, 157, 988, 1059, 1084, 1184, 1261, 1303, 1311
BstMAI GTCTC 3 cut(s) 150, 794, 1505
BstMBI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
BstMWI GCNNNNNNNGC 2 cut(s) 767, 1337
BstNI CCWGG 4 cut(s) 669, 747, 882, 1479
BstNSI RCATGY 4 cut(s) 136, 778, 1352, 1585
BstSCI CCNGG 6 cut(s) 57, 667, 745, 880, 1477, 1599
BstUI CGCG 1 cut(s) 1062
BstV1I GCAGC 3 cut(s) 244, 1198, 1324
BstX2I RGATCY 3 cut(s) 154, 1056, 1258
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 3 cut(s) 154, 1056, 1258
Bsu15I ATCGAT 1 cut(s) 1089
Bsu36I CCTNAGG 1 cut(s) 1158
BsuRI GGCC 2 cut(s) 96, 920
BsuTUI ATCGAT 1 cut(s) 1089
BtgI CCRYGG 1 cut(s) 594
BtsCI GGATG 1 cut(s) 340
BtsIMutI CAGTG 3 cut(s) 210, 580, 621
BveI ACCTGC 1 cut(s) 154
Cac8I GCNNGC 3 cut(s) 768, 1329, 1386
CaiI CAGNNNCTG 1 cut(s) 514
CciI TCATGA 1 cut(s) 1045
Cfr10I RCCGGY 1 cut(s) 537
Cfr13I GGNCC 5 cut(s) 683, 725, 918, 1131, 1220
ClaI ATCGAT 1 cut(s) 1089
Csp6I GTAC 2 cut(s) 393, 1067
CspAI ACCGGT 1 cut(s) 537
CspCI CAANNNNNGTGG 2 cut(s) 831, 866
CviQI GTAC 2 cut(s) 393, 1067
DdeI CTNAG 6 cut(s) 13, 213, 687, 1158, 1287, 1404
DpnI GATC 9 cut(s) 23, 156, 987, 1058, 1083, 1183, 1260, 1302, 1310
DpnII GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
DraI TTTAAA 1 cut(s) 1447
EaeI YGGCCR 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 488
EarI CTCTTC 1 cut(s) 488
Ecl136II GAGCTC 1 cut(s) 674
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 1 cut(s) 676
Eco31I GGTCTC 2 cut(s) 794, 1505
Eco32I GATATC 1 cut(s) 1597
Eco47I GGWCC 4 cut(s) 683, 725, 1131, 1220
Eco53kI GAGCTC 1 cut(s) 674
Eco57I CTGAAG 1 cut(s) 402
Eco81I CCTNAGG 1 cut(s) 1158
EcoICRI GAGCTC 1 cut(s) 674
EcoNI CCTNNNNNAGG 1 cut(s) 1139
EcoRII CCWGG 4 cut(s) 667, 745, 880, 1477
EcoRV GATATC 1 cut(s) 1597
EcoT14I CCWWGG 1 cut(s) 594
EcoT38I GRGCYC 1 cut(s) 676
ErhI CCWWGG 1 cut(s) 594
FalI AAGNNNNNCTT 2 cut(s) 1245, 1277
FaqI GGGAC 1 cut(s) 1117
Fnu4HI GCNGC 4 cut(s) 97, 233, 1212, 1338
FokI GGATG 1 cut(s) 347
FriOI GRGCYC 1 cut(s) 676
Fsp4HI GCNGC 4 cut(s) 97, 233, 1212, 1338
FspBI CTAG 3 cut(s) 236, 660, 1557
GluI GCNGC 4 cut(s) 97, 233, 1212, 1338
GsaI CCCAGC 1 cut(s) 1589
GsuI CTGGAG 3 cut(s) 915, 954, 1461
HaeIII GGCC 2 cut(s) 96, 920
HapII CCGG 4 cut(s) 58, 538, 1306, 1601
HincII GTYRAC 1 cut(s) 1576
HindII GTYRAC 1 cut(s) 1576
HinfI GANTC 3 cut(s) 80, 182, 1408
HpaII CCGG 4 cut(s) 58, 538, 1306, 1601
HphI GGTGA 1 cut(s) 405
Hpy166II GTNNAC 1 cut(s) 1576
Hpy188I TCNGA 7 cut(s) 21, 85, 1139, 1149, 1270, 1491, 1622
Hpy188III TCNNGA 7 cut(s) 508, 686, 723, 894, 1046, 1157, 1543
Hpy8I GTNNAC 1 cut(s) 1576
HpyAV CCTTC 1 cut(s) 426
HpyCH4III ACNGT 1 cut(s) 575
HpyCH4V TGCA 5 cut(s) 232, 248, 293, 406, 766
HpyF10VI GCNNNNNNNGC 2 cut(s) 767, 1337
HpyF3I CTNAG 6 cut(s) 13, 213, 687, 1158, 1287, 1404
Kzo9I GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
LmnI GCTCC 5 cut(s) 38, 671, 856, 1118, 1603
Lsp1109I GCAGC 3 cut(s) 244, 1198, 1324
LweI GCATC 3 cut(s) 103, 574, 1371
MaeI CTAG 3 cut(s) 236, 660, 1557
MaeIII GTNAC 5 cut(s) 469, 529, 937, 962, 1523
MalI GATC 9 cut(s) 23, 156, 987, 1058, 1083, 1183, 1260, 1302, 1310
MbiI CCGCTC 1 cut(s) 460
MboI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
MboII GAAGA 6 cut(s) 118, 426, 505, 1253, 1448, 1624
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 3 cut(s) 154, 1056, 1258
MhlI GDGCHC 4 cut(s) 35, 45, 676, 861
MluCI AATT 9 cut(s) 6, 477, 1100, 1316, 1429, 1463, 1502, 1537, 1615
MlyI GAGTC 1 cut(s) 1402
MmeI TCCRAC 2 cut(s) 312, 834
MroXI GAANNNNTTC 1 cut(s) 1616
MseI TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
MslI CAYNNNNRTG 2 cut(s) 599, 1126
MspCI CTTAAG 1 cut(s) 1516
MspI CCGG 4 cut(s) 58, 538, 1306, 1601
MspR9I CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
MunI CAATTG 1 cut(s) 477
MvaI CCWGG 4 cut(s) 669, 747, 882, 1479
MvnI CGCG 1 cut(s) 1062
MwoI GCNNNNNNNGC 2 cut(s) 767, 1337
NciI CCSGG 2 cut(s) 59, 1601
NcoI CCATGG 1 cut(s) 594
NdeII GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
NlaIV GGNNCC 2 cut(s) 456, 1133
NmeAIII GCCGAG 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 962
NspI RCATGY 4 cut(s) 136, 778, 1352, 1585
NspV TTCGAA 1 cut(s) 362
PagI TCATGA 1 cut(s) 1045
PaqCI CACCTGC 1 cut(s) 154
PdmI GAANNNNTTC 1 cut(s) 1616
PfeI GAWTC 2 cut(s) 80, 182
PflMI CCANNNNNTGG 1 cut(s) 785
PfoI TCCNGGA 2 cut(s) 667, 1599
PinAI ACCGGT 1 cut(s) 537
PkrI GCNGC 4 cut(s) 98, 234, 1213, 1339
PleI GAGTC 1 cut(s) 1402
PpsI GAGTC 1 cut(s) 1402
PshBI ATTAAT 1 cut(s) 1103
Psp124BI GAGCTC 1 cut(s) 676
Psp6I CCWGG 4 cut(s) 667, 745, 880, 1477
PspFI CCCAGC 1 cut(s) 1585
PspGI CCWGG 4 cut(s) 667, 745, 880, 1477
PspN4I GGNNCC 2 cut(s) 456, 1133
PspPI GGNCC 5 cut(s) 683, 725, 918, 1131, 1220
PstNI CAGNNNCTG 1 cut(s) 514
PsuI RGATCY 3 cut(s) 154, 1056, 1258
RsaI GTAC 2 cut(s) 394, 1068
RsaNI GTAC 2 cut(s) 393, 1067
RseI CAYNNNNRTG 2 cut(s) 599, 1126
SacI GAGCTC 1 cut(s) 676
SaqAI TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
SatI GCNGC 4 cut(s) 97, 233, 1212, 1338
Sau3AI GATC 9 cut(s) 21, 154, 985, 1056, 1081, 1181, 1258, 1300, 1308
Sau96I GGNCC 5 cut(s) 683, 725, 918, 1131, 1220
SchI GAGTC 1 cut(s) 1402
ScrFI CCNGG 6 cut(s) 59, 669, 747, 882, 1479, 1601
SduI GDGCHC 4 cut(s) 35, 45, 676, 861
SfaNI GCATC 3 cut(s) 103, 574, 1371
SfuI TTCGAA 1 cut(s) 362
SinI GGWCC 4 cut(s) 683, 725, 1131, 1220
SmiMI CAYNNNNRTG 2 cut(s) 599, 1126
SmlI CTYRAG 2 cut(s) 158, 1516
SmoI CTYRAG 2 cut(s) 158, 1516
SpeI ACTAGT 1 cut(s) 659
Sse9I AATT 9 cut(s) 6, 477, 1100, 1316, 1429, 1463, 1502, 1537, 1615
SsiI CCGC 4 cut(s) 97, 458, 761, 1060
SspMI CTAG 3 cut(s) 236, 660, 1557
SstI GAGCTC 1 cut(s) 676
StyD4I CCNGG 6 cut(s) 57, 667, 745, 880, 1477, 1599
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 1 cut(s) 575
TaqI TCGA 3 cut(s) 362, 1089, 1542
TasI AATT 9 cut(s) 6, 477, 1100, 1316, 1429, 1463, 1502, 1537, 1615
TatI WGTACW 1 cut(s) 1066
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 2 cut(s) 80, 182
Tru1I TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
Tru9I TTAA 9 cut(s) 120, 543, 642, 654, 1103, 1274, 1323, 1446, 1517
TscAI CASTG 3 cut(s) 217, 580, 628
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 3 cut(s) 232, 1211, 1337
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 6 cut(s) 208, 747, 933, 1020, 1329, 1457
TspRI CASTG 3 cut(s) 217, 580, 628
Van91I CCANNNNNTGG 1 cut(s) 785
Vha464I CTTAAG 1 cut(s) 1516
VpaK11BI GGWCC 4 cut(s) 683, 725, 1131, 1220
VspI ATTAAT 1 cut(s) 1103
XagI CCTNNNNNAGG 1 cut(s) 1139
XapI RAATTY 4 cut(s) 6, 1316, 1463, 1615
XceI RCATGY 4 cut(s) 136, 778, 1352, 1585
XmnI GAANNNNTTC 1 cut(s) 1616
XspI CTAG 3 cut(s) 236, 660, 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.