MD04G1042800.v1.1

purine nucleoside binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0007120
Physical Location & Seq
Forward (+)
5037557 .. 5043682
6126 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1042800.v1.1.491

Sequence Viewer

Length: 1935 bp
ATGTCTCATTCGTGCATTCGTTCTCTTCCAGCGCTGAAGAAGAAGTTTGGTTTTGGTCTCCTTCATAATCCGCTTCAGAGTTCTACCAACACAATCCCCAACTTGTACATAGAGAGACAAAAGCACTCAAATAATTTTGGATCATTATTCACCGCGGCCTTTTTAAGTCCCTTTGGAAATCCAACTTTAAGGTTTAGGGCTCAGTGCAGGTCAATATCAATCTTGCATCCTTTTATCCTTCAGGCCACAGGGGAGCTTTGCACGCTACCCACTTATCAACTGCCGGCTTCTGATACTTGCAAGGGTACAGCTGTTCATTTAGAGGAACCCCATGTCGATTCTGATTGCAAAGTTACTGCCGAGAAAACTAGGGGATTGTACAAAAAACCAGTGGATTTCACCAAAGTGAACAAGAATCTGCTTCCTACTGTAGTTCTTGTTGGGCGCCCGAATGTGGGCAAGTCAGCTTTGTTTAATCGTTTAATCCGGAGGCGGGAGGCTCTTGTCTACAATACACCAGATGATCATGTTACTCGTGATATAAGAGAAGGCATTGCCAAATTGGGTGATCTACGATTTAGAGTACTGGACTCAGCTGGTTTAGAAACGGCTGCATCTTCAGGCTCTATTCTTGATAGAACATCAGGAATGACTGCAAGTGTTCTCGCAAGGTCTCAGTTTGCGGTTTTCCTGTTAGATGTAAGAGCTGGACTGCACCCCCTTGATCTGGAGGTTGGAAGGTGGTTGCGCAAAAATGCACCTGGAATCAATCTTGTCGTTGCCATGAATAAGTCTGAAGCACTTTTTGATGGTAGTGGTTCTCTTATGACGGCTGCTACTGAAGCTTATAGGTTAGGATTTGGTGACCCTATTGCCATATCAGCTGAAACTGGACTAGGAATGCAAGATCTTTATGAGAGCCTGAAACCTAAGCTTGAGGACTATATGCTCCAAGTATTAAACAATGAAGAAGGTACTGCTGAGGATGGCAGTTCTTGTGATGTTGAGGAAAGTAAGCTGGAATTACAGTTGGCAATTGTAGGAAGACCCAATGTTGGGAAGTCAACCTTGCTGAATACATTGTTACAAGAAGAACGTGTGCTGGTGGGCCCAGAAGCTGGTTTGACAAGAGATTCAATTAGAGCTCAGTTTGAGTTTGAAGGGAGAACTGTATACCTGGTAGACACTGCAGGTTGGTTACAACGAGCTAAACAAGAGAAAGGACCATCATCCTTGAGCATTGTGCAGACAAGGAAGAATCTAATGAGAGCTCATGTAGTTGCTCTGGTCCTTGATGCAGAAGAGATTGCAAATTCTAGGAGAAGTTTGAAGCATGATGAAGTAGTTATAGCTAGACAGGCAGTTGAAGAAGGCCGGGGCTTGGTTGTGGTTGTGAACAAGATGGATCTATTAAGGGGGAAGCAATTATTTGACAAGGTCATGGAAATTGTGCCCCAAGAAATCCAGACTATCATGCCCCAGGTGACTGGGATACCAATCGTATTCATATCAGCCTTGGAGGGAAGGGGCCACGCAGATGTCATGCACCAAGTTATTGATACATATGAAAAATGGTGTTCACGATTGTCAACAGCTCGTCTCAACCGTTGGTTGCGTAAGGTTATGAGCAGGCATTCTTGGAAAGATCAGGCTGCTCAACCCAAGGTTAAGTACTTCACGCAGGTGAAGGCCAGACCGCCTACTTTTGTTGCCTTTTTGAGTGGGAAGAAAGAGCTCTCGGAAACAGACATCAGGTTCTTAAAAAGGTCTTTGAAGGAAGACTTCGATTTGGGCGGAATACCGATCAGGATCATGCAGAGGTCCGTCGAAAGGAAATCTGCGAGTAGCAGTAGCAAGAGCGGCCAAACTACACATAGAACGGCTGAAAGGATGTCGTCCGACAAGAGAAGTAGCGTGTTGGTTGAAGTTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_dom-like MMR_HSR1

Protein Analysis

645

Amino Acids

71.56

Weight (kDa)

9.35

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 143 - 264 1.6e-17 50S ribosome-binding GTPase
FeoB_N PF02421 343 - 517 2.5e-11 Ferrous iron transport protein B
MMR_HSR1 PF01926 344 - 467 2.8e-21 50S ribosome-binding GTPase
GTP_EFTU PF00009 344 - 522 7.3e-08 Elongation factor Tu GTP binding domain
KH_dom-like PF14714 528 - 607 1.3e-20 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1672
Acc16I TGCGCA 1 cut(s) 749
Acc36I ACCTGC 3 cut(s) 198, 1181, 1672
AccB1I GGYRCC 1 cut(s) 444
AccB7I CCANNNNNTGG 1 cut(s) 1118
AccBSI CCGCTC 1 cut(s) 1860
AccI GTMKAC 3 cut(s) 507, 1173, 1182
AccII CGCG 1 cut(s) 155
AccIII TCCGGA 1 cut(s) 486
AciI CCGC 8 cut(s) 71, 153, 155, 493, 683, 1697, 1794, 1860
AclWI GGATC 3 cut(s) 148, 1413, 1817
AcoI YGGCCR 1 cut(s) 1861
AcsI RAATTY 1 cut(s) 1312
AcuI CTGAAG 6 cut(s) 56, 59, 224, 603, 816, 861
AcyI GRCGYC 1 cut(s) 445
AfaI GTAC 6 cut(s) 107, 307, 380, 585, 976, 1673
AfeI AGCGCT 1 cut(s) 33
AfiI CCNNNNNNNGG 9 cut(s) 454, 455, 493, 727, 1055, 1056, 1118, 1381, 1830
AflIII ACRYGT 1 cut(s) 1096
AgsI TTSAA 7 cut(s) 1137, 1160, 1330, 1367, 1774, 1925, 1931
AjnI CCWGG 3 cut(s) 760, 1176, 1479
AleI CACNNNNGTG 2 cut(s) 404, 1682
Alw21I GWGCWC 3 cut(s) 1147, 1273, 1737
Alw26I GTCTC 5 cut(s) 9, 62, 109, 678, 1604
AlwI GGATC 3 cut(s) 148, 1413, 1817
AlwNI CAGNNNCTG 1 cut(s) 1118
Aor13HI TCCGGA 1 cut(s) 486
Aor51HI AGCGCT 1 cut(s) 33
AoxI GGCC 7 cut(s) 156, 243, 1108, 1372, 1528, 1689, 1861
ApaI GGGCCC 1 cut(s) 1112
ApeKI GCWGC 3 cut(s) 611, 833, 1652
ApoI RAATTY 1 cut(s) 1312
AspLEI GCGC 3 cut(s) 34, 447, 750
AspS9I GGNCC 6 cut(s) 1108, 1109, 1223, 1288, 1528, 1821
AsuC2I CCSGG 1 cut(s) 1376
AsuHPI GGTGA 6 cut(s) 142, 391, 578, 875, 1495, 1696
AvaII GGWCC 3 cut(s) 1223, 1288, 1821
BaeGI GKGCMC 2 cut(s) 1112, 1455
BaeI ACNNNNGTAYC 2 cut(s) 297, 330
BanI GGYRCC 1 cut(s) 444
BanII GRGCYC 5 cut(s) 202, 1112, 1147, 1273, 1737
BauI CACGAG 1 cut(s) 534
BbsI GAAGAC 2 cut(s) 1051, 1785
Bbv12I GWGCWC 3 cut(s) 1147, 1273, 1737
BbvCI CCTCAGC 1 cut(s) 981
BbvI GCAGC 3 cut(s) 598, 820, 1639
BccI CCATC 4 cut(s) 803, 980, 1234, 1396
BceAI ACGGC 3 cut(s) 624, 846, 1896
BciT130I CCWGG 3 cut(s) 762, 1178, 1481
BciVI GTATCC 1 cut(s) 1485
BclI TGATCA 1 cut(s) 523
BcnI CCSGG 1 cut(s) 1376
BcoDI GTCTC 5 cut(s) 9, 62, 109, 678, 1604
BfaI CTAG 4 cut(s) 369, 896, 1317, 1353
BfmI CTRYAG 2 cut(s) 429, 1188
BfoI RGCGCY 2 cut(s) 35, 448
BfuAI ACCTGC 3 cut(s) 198, 1181, 1672
BfuI GTATCC 1 cut(s) 1485
BglII AGATCT 1 cut(s) 907
BisI GCNGC 5 cut(s) 156, 612, 834, 1653, 1861
BlsI GCNGC 5 cut(s) 157, 613, 835, 1654, 1862
BmcAI AGTACT 2 cut(s) 585, 1673
Bme1390I CCNGG 4 cut(s) 762, 1178, 1376, 1481
Bme18I GGWCC 3 cut(s) 1223, 1288, 1821
BmgT120I GGNCC 6 cut(s) 1108, 1109, 1223, 1288, 1528, 1821
BmiI GGNNCC 4 cut(s) 327, 446, 1110, 1529
BmrFI CCNGG 4 cut(s) 762, 1178, 1376, 1481
BmrI ACTGGG 1 cut(s) 1497
BmsI GCATC 3 cut(s) 235, 623, 1285
BmuI ACTGGG 1 cut(s) 1497
BpiI GAAGAC 2 cut(s) 1051, 1785
BpmI CTGGAG 1 cut(s) 749
Bpu10I CCTNAGC 2 cut(s) 930, 981
BpuEI CTTGAG 2 cut(s) 956, 1255
BpuMI CCSGG 1 cut(s) 1376
BsaBI GATNNNNATC 2 cut(s) 1496, 1808
BsaHI GRCGYC 1 cut(s) 445
BsaI GGTCTC 2 cut(s) 62, 678
BsaJI CCNNGG 5 cut(s) 153, 1375, 1479, 1515, 1662
BsaWI WCCGGW 1 cut(s) 486
Bsc4I CCNNNNNNNGG 9 cut(s) 454, 455, 493, 727, 1055, 1056, 1118, 1381, 1830
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 4 cut(s) 389, 591, 895, 1492
Bse3DI GCAATG 1 cut(s) 552
Bse8I GATNNNNATC 2 cut(s) 1496, 1808
BseAI TCCGGA 1 cut(s) 486
BseBI CCWGG 3 cut(s) 762, 1178, 1481
BseDI CCNNGG 5 cut(s) 153, 1375, 1479, 1515, 1662
BseGI GGATG 4 cut(s) 226, 991, 1229, 1896
BseJI GATNNNNATC 2 cut(s) 1496, 1808
BseLI CCNNNNNNNGG 9 cut(s) 454, 455, 493, 727, 1055, 1056, 1118, 1381, 1830
BseMI GCAATG 1 cut(s) 552
BseMII CTCAG 5 cut(s) 215, 606, 689, 972, 1160
BseNI ACTGG 4 cut(s) 389, 591, 895, 1492
BseSI GKGCMC 2 cut(s) 1112, 1455
BseXI GCAGC 3 cut(s) 598, 820, 1639
BsgI GTGCAG 3 cut(s) 226, 698, 1265
Bsh1236I CGCG 1 cut(s) 155
BshFI GGCC 7 cut(s) 158, 245, 1110, 1374, 1530, 1691, 1863
BshNI GGYRCC 1 cut(s) 444
BsiHKAI GWGCWC 3 cut(s) 1147, 1273, 1737
BsiSI CCGG 3 cut(s) 284, 487, 1375
BslFI GGGAC 1 cut(s) 153
BslI CCNNNNNNNGG 9 cut(s) 454, 455, 493, 727, 1055, 1056, 1118, 1381, 1830
BsmAI GTCTC 5 cut(s) 9, 62, 109, 678, 1604
BsmBI CGTCTC 1 cut(s) 1604
BsmFI GGGAC 1 cut(s) 153
BsmI GAATGC 3 cut(s) 15, 906, 1633
BsnI GGCC 7 cut(s) 158, 245, 1110, 1374, 1530, 1691, 1863
Bso31I GGTCTC 2 cut(s) 62, 678
Bsp120I GGGCCC 1 cut(s) 1108
Bsp1286I GDGCHC 6 cut(s) 202, 1112, 1147, 1273, 1455, 1737
Bsp13I TCCGGA 1 cut(s) 486
Bsp1407I TGTACA 2 cut(s) 105, 378
Bsp143I GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
BspACI CCGC 8 cut(s) 71, 153, 155, 493, 683, 1697, 1794, 1860
BspANI GGCC 7 cut(s) 158, 245, 1110, 1374, 1530, 1691, 1863
BspCNI CTCAG 5 cut(s) 214, 605, 688, 973, 1159
BspEI TCCGGA 1 cut(s) 486
BspFNI CGCG 1 cut(s) 155
BspLI GGNNCC 4 cut(s) 327, 446, 1110, 1529
BspMAI CTGCAG 1 cut(s) 1192
BspMI ACCTGC 3 cut(s) 198, 1181, 1672
BspPI GGATC 3 cut(s) 148, 1413, 1817
BspT107I GGYRCC 1 cut(s) 444
BspTNI GGTCTC 2 cut(s) 62, 678
BsrBI CCGCTC 1 cut(s) 1860
BsrDI GCAATG 1 cut(s) 552
BsrFI RCCGGY 1 cut(s) 283
BsrGI TGTACA 2 cut(s) 105, 378
BsrI ACTGG 4 cut(s) 389, 591, 895, 1492
BssAI RCCGGY 1 cut(s) 283
BssECI CCNNGG 5 cut(s) 153, 1375, 1479, 1515, 1662
BssMI GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
BssNAI GTATAC 1 cut(s) 1174
BssNI GRCGYC 1 cut(s) 445
BssSI CACGAG 1 cut(s) 534
BssT1I CCWWGG 2 cut(s) 1515, 1662
Bst1107I GTATAC 1 cut(s) 1174
Bst2BI CACGAG 1 cut(s) 534
Bst2UI CCWGG 3 cut(s) 762, 1178, 1481
Bst4CI ACNGT 4 cut(s) 430, 1029, 1171, 1607
Bst6I CTCTTC 2 cut(s) 30, 1296
BstACI GRCGYC 1 cut(s) 445
BstAUI TGTACA 2 cut(s) 105, 378
BstC8I GCNNGC 3 cut(s) 263, 285, 1631
BstDEI CTNAG 6 cut(s) 201, 592, 675, 930, 981, 1146
BstDSI CCRYGG 1 cut(s) 153
BstEII GGTNACC 1 cut(s) 863
BstF5I GGATG 4 cut(s) 226, 991, 1229, 1896
BstFNI CGCG 1 cut(s) 155
BstH2I RGCGCY 2 cut(s) 35, 448
BstHHI GCGC 3 cut(s) 34, 447, 750
BstKTI GATC 9 cut(s) 143, 526, 571, 727, 910, 1408, 1648, 1806, 1812
BstMAI GTCTC 5 cut(s) 9, 62, 109, 678, 1604
BstMBI GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
BstMWI GCNNNNNNNGC 5 cut(s) 262, 842, 881, 1358, 1860
BstNI CCWGG 3 cut(s) 762, 1178, 1481
BstPI GGTNACC 1 cut(s) 863
BstSCI CCNGG 4 cut(s) 760, 1176, 1374, 1479
BstSFI CTRYAG 2 cut(s) 429, 1188
BstSLI GKGCMC 2 cut(s) 1112, 1455
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 3 cut(s) 598, 820, 1639
BstV2I GAAGAC 2 cut(s) 1051, 1785
BstX2I RGATCY 2 cut(s) 907, 1405
BstXI CCANNNNNNTGG 1 cut(s) 1487
BstYI RGATCY 2 cut(s) 907, 1405
BstZ17I GTATAC 1 cut(s) 1174
BsuI GTATCC 1 cut(s) 1485
BsuRI GGCC 7 cut(s) 158, 245, 1110, 1374, 1530, 1691, 1863
BtgI CCRYGG 1 cut(s) 153
BtsCI GGATG 4 cut(s) 226, 991, 1229, 1896
BtsI GCAGTG 1 cut(s) 1185
BtsIMutI CAGTG 3 cut(s) 209, 396, 1185
BveI ACCTGC 3 cut(s) 198, 1181, 1672
Cac8I GCNNGC 3 cut(s) 263, 285, 1631
CaiI CAGNNNCTG 1 cut(s) 1118
CfoI GCGC 3 cut(s) 34, 447, 750
Cfr10I RCCGGY 1 cut(s) 283
Cfr13I GGNCC 6 cut(s) 1108, 1109, 1223, 1288, 1528, 1821
Cfr42I CCGCGG 1 cut(s) 156
CsiI ACCWGGT 1 cut(s) 1176
Csp6I GTAC 6 cut(s) 106, 306, 379, 584, 975, 1672
CviAII CATG 9 cut(s) 332, 527, 784, 1274, 1334, 1441, 1474, 1543, 1813
CviQI GTAC 6 cut(s) 106, 306, 379, 584, 975, 1672
DdeI CTNAG 6 cut(s) 201, 592, 675, 930, 981, 1146
DinI GGCGCC 1 cut(s) 446
DpnI GATC 9 cut(s) 142, 525, 570, 726, 909, 1407, 1647, 1805, 1811
DpnII GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
EaeI YGGCCR 1 cut(s) 1861
Eam1104I CTCTTC 2 cut(s) 30, 1296
EarI CTCTTC 2 cut(s) 30, 1296
EciI GGCGGA 1 cut(s) 1809
Ecl136II GAGCTC 3 cut(s) 1145, 1271, 1735
Eco130I CCWWGG 2 cut(s) 1515, 1662
Eco24I GRGCYC 5 cut(s) 202, 1112, 1147, 1273, 1737
Eco31I GGTCTC 2 cut(s) 62, 678
Eco47I GGWCC 3 cut(s) 1223, 1288, 1821
Eco47III AGCGCT 1 cut(s) 33
Eco53kI GAGCTC 3 cut(s) 1145, 1271, 1735
Eco57I CTGAAG 6 cut(s) 56, 59, 224, 603, 816, 861
Eco91I GGTNACC 1 cut(s) 863
EcoICRI GAGCTC 3 cut(s) 1145, 1271, 1735
EcoO65I GGTNACC 1 cut(s) 863
EcoRII CCWGG 3 cut(s) 760, 1176, 1479
EcoT14I CCWWGG 2 cut(s) 1515, 1662
EcoT38I GRGCYC 5 cut(s) 202, 1112, 1147, 1273, 1737
EgeI GGCGCC 1 cut(s) 446
EheI GGCGCC 1 cut(s) 446
ErhI CCWWGG 2 cut(s) 1515, 1662
Esp3I CGTCTC 1 cut(s) 1604
FaeI CATG 9 cut(s) 335, 530, 787, 1277, 1337, 1444, 1477, 1546, 1816
FalI AAGNNNNNCTT 4 cut(s) 1052, 1084, 1766, 1798
FaqI GGGAC 1 cut(s) 153
FatI CATG 9 cut(s) 331, 526, 783, 1273, 1333, 1440, 1473, 1542, 1812
FauI CCCGC 1 cut(s) 486
FauNDI CATATG 1 cut(s) 1564
FbaI TGATCA 1 cut(s) 523
FblI GTMKAC 3 cut(s) 507, 1173, 1182
Fnu4HI GCNGC 5 cut(s) 156, 612, 834, 1653, 1861
FokI GGATG 4 cut(s) 213, 998, 1216, 1903
FriOI GRGCYC 5 cut(s) 202, 1112, 1147, 1273, 1737
Fsp4HI GCNGC 5 cut(s) 156, 612, 834, 1653, 1861
FspBI CTAG 4 cut(s) 369, 896, 1317, 1353
FspI TGCGCA 1 cut(s) 749
GlaI GCGC 3 cut(s) 33, 446, 749
GluI GCNGC 5 cut(s) 156, 612, 834, 1653, 1861
GsuI CTGGAG 1 cut(s) 749
HaeII RGCGCY 2 cut(s) 35, 448
HaeIII GGCC 7 cut(s) 158, 245, 1110, 1374, 1530, 1691, 1863
HapII CCGG 3 cut(s) 284, 487, 1375
HhaI GCGC 3 cut(s) 34, 447, 750
Hin1I GRCGYC 1 cut(s) 445
Hin1II CATG 9 cut(s) 335, 530, 787, 1277, 1337, 1444, 1477, 1546, 1816
Hin6I GCGC 3 cut(s) 32, 445, 748
HinP1I GCGC 3 cut(s) 32, 445, 748
HincII GTYRAC 2 cut(s) 1065, 1590
HindII GTYRAC 2 cut(s) 1065, 1590
HindIII AAGCTT 2 cut(s) 843, 932
HinfI GANTC 6 cut(s) 338, 415, 590, 765, 1133, 1258
HpaII CCGG 3 cut(s) 284, 487, 1375
HphI GGTGA 6 cut(s) 142, 391, 578, 875, 1495, 1696
Hpy166II GTNNAC 8 cut(s) 409, 508, 1065, 1174, 1183, 1396, 1580, 1590
Hpy188I TCNGA 6 cut(s) 78, 292, 343, 796, 1741, 1900
Hpy188III TCNNGA 8 cut(s) 487, 536, 632, 645, 728, 1465, 1581, 1807
Hpy8I GTNNAC 8 cut(s) 409, 508, 1065, 1174, 1183, 1396, 1580, 1590
Hpy99I CGWCG 1 cut(s) 1829
HpyCH4III ACNGT 4 cut(s) 430, 1029, 1171, 1607
HpyCH4IV ACGT 1 cut(s) 1096
HpyF10VI GCNNNNNNNGC 5 cut(s) 262, 842, 881, 1358, 1860
HpyF3I CTNAG 6 cut(s) 201, 592, 675, 930, 981, 1146
HpySE526I ACGT 1 cut(s) 1096
Hsp92I GRCGYC 1 cut(s) 445
Hsp92II CATG 9 cut(s) 335, 530, 787, 1277, 1337, 1444, 1477, 1546, 1816
HspAI GCGC 3 cut(s) 32, 445, 748
KasI GGCGCC 1 cut(s) 444
Kpn2I TCCGGA 1 cut(s) 486
KroI GCCGGC 1 cut(s) 283
KroNI GCCGGC 1 cut(s) 285
Ksp22I TGATCA 1 cut(s) 523
KspI CCGCGG 1 cut(s) 156
Kzo9I GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
LmnI GCTCC 2 cut(s) 253, 954
Lsp1109I GCAGC 3 cut(s) 598, 820, 1639
LweI GCATC 3 cut(s) 235, 623, 1285
MabI ACCWGGT 1 cut(s) 1176
MaeI CTAG 4 cut(s) 369, 896, 1317, 1353
MaeII ACGT 1 cut(s) 1096
MaeIII GTNAC 6 cut(s) 352, 529, 863, 1083, 1197, 1483
MalI GATC 9 cut(s) 142, 525, 570, 726, 909, 1407, 1647, 1805, 1811
MbiI CCGCTC 1 cut(s) 1860
MboI GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 2 cut(s) 907, 1405
MhlI GDGCHC 6 cut(s) 202, 1112, 1147, 1273, 1455, 1737
MluCI AATT 8 cut(s) 133, 560, 1022, 1035, 1137, 1312, 1424, 1446
Mly113I GGCGCC 1 cut(s) 445
MlyI GAGTC 1 cut(s) 584
MmeI TCCRAC 3 cut(s) 206, 715, 1923
MnlI CCTC 9 cut(s) 316, 483, 490, 724, 931, 976, 1000, 1513, 1812
MroI TCCGGA 1 cut(s) 486
MroNI GCCGGC 1 cut(s) 283
MseI TTAA 8 cut(s) 164, 188, 474, 482, 959, 1412, 1668, 1760
MslI CAYNNNNRTG 3 cut(s) 404, 1536, 1682
MspA1I CMGCKG 4 cut(s) 155, 311, 596, 884
MspI CCGG 3 cut(s) 284, 487, 1375
MspR9I CCNGG 4 cut(s) 762, 1178, 1376, 1481
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 3 cut(s) 15, 906, 1633
MvaI CCWGG 3 cut(s) 762, 1178, 1481
MvnI CGCG 1 cut(s) 155
MwoI GCNNNNNNNGC 5 cut(s) 262, 842, 881, 1358, 1860
NaeI GCCGGC 1 cut(s) 285
NarI GGCGCC 1 cut(s) 445
NciI CCSGG 1 cut(s) 1376
NdeI CATATG 1 cut(s) 1564
NdeII GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
NgoMIV GCCGGC 1 cut(s) 283
NlaIII CATG 9 cut(s) 335, 530, 787, 1277, 1337, 1444, 1477, 1546, 1816
NlaIV GGNNCC 4 cut(s) 327, 446, 1110, 1529
NmeAIII GCCGAG 1 cut(s) 385
NmuCI GTSAC 2 cut(s) 863, 1483
NsbI TGCGCA 1 cut(s) 749
OliI CACNNNNGTG 2 cut(s) 404, 1682
PaqCI CACCTGC 1 cut(s) 1672
PcsI WCGNNNNNNNCGW 1 cut(s) 1603
PctI GAATGC 3 cut(s) 15, 906, 1633
PdiI GCCGGC 1 cut(s) 285
PfeI GAWTC 5 cut(s) 338, 415, 765, 1133, 1258
PflFI GACNNNGTC 1 cut(s) 1436
PflMI CCANNNNNTGG 1 cut(s) 1118
PkrI GCNGC 5 cut(s) 157, 613, 835, 1654, 1862
PleI GAGTC 1 cut(s) 584
PluTI GGCGCC 1 cut(s) 448
PpsI GAGTC 1 cut(s) 584
Psp124BI GAGCTC 3 cut(s) 1147, 1273, 1737
Psp6I CCWGG 3 cut(s) 760, 1176, 1479
PspEI GGTNACC 1 cut(s) 863
PspGI CCWGG 3 cut(s) 760, 1176, 1479
PspN4I GGNNCC 4 cut(s) 327, 446, 1110, 1529
PspOMI GGGCCC 1 cut(s) 1108
PspPI GGNCC 6 cut(s) 1108, 1109, 1223, 1288, 1528, 1821
PstI CTGCAG 1 cut(s) 1192
PstNI CAGNNNCTG 1 cut(s) 1118
PsuI RGATCY 2 cut(s) 907, 1405
PsyI GACNNNGTC 1 cut(s) 1436
PvuII CAGCTG 3 cut(s) 311, 596, 884
RsaI GTAC 6 cut(s) 107, 307, 380, 585, 976, 1673
RsaNI GTAC 6 cut(s) 106, 306, 379, 584, 975, 1672
RseI CAYNNNNRTG 3 cut(s) 404, 1536, 1682
SacI GAGCTC 3 cut(s) 1147, 1273, 1737
SacII CCGCGG 1 cut(s) 156
SaqAI TTAA 8 cut(s) 164, 188, 474, 482, 959, 1412, 1668, 1760
SatI GCNGC 5 cut(s) 156, 612, 834, 1653, 1861
Sau3AI GATC 9 cut(s) 140, 523, 568, 724, 907, 1405, 1645, 1803, 1809
Sau96I GGNCC 6 cut(s) 1108, 1109, 1223, 1288, 1528, 1821
ScaI AGTACT 2 cut(s) 585, 1673
SchI GAGTC 1 cut(s) 584
ScrFI CCNGG 4 cut(s) 762, 1178, 1376, 1481
SduI GDGCHC 6 cut(s) 202, 1112, 1147, 1273, 1455, 1737
SexAI ACCWGGT 1 cut(s) 1176
SfaNI GCATC 3 cut(s) 235, 623, 1285
SfcI CTRYAG 2 cut(s) 429, 1188
SfoI GGCGCC 1 cut(s) 446
Sfr303I CCGCGG 1 cut(s) 156
SgrBI CCGCGG 1 cut(s) 156
SinI GGWCC 3 cut(s) 1223, 1288, 1821
SmiMI CAYNNNNRTG 3 cut(s) 404, 1536, 1682
SmlI CTYRAG 2 cut(s) 935, 1234
SmoI CTYRAG 2 cut(s) 935, 1234
Sse9I AATT 8 cut(s) 133, 560, 1022, 1035, 1137, 1312, 1424, 1446
SsiI CCGC 8 cut(s) 71, 153, 155, 493, 683, 1697, 1794, 1860
SspDI GGCGCC 1 cut(s) 444
SspMI CTAG 4 cut(s) 369, 896, 1317, 1353
SstI GAGCTC 3 cut(s) 1147, 1273, 1737
StyD4I CCNGG 4 cut(s) 760, 1176, 1374, 1479
StyI CCWWGG 2 cut(s) 1515, 1662
TaaI ACNGT 4 cut(s) 430, 1029, 1171, 1607
TaiI ACGT 1 cut(s) 1099
TaqI TCGA 3 cut(s) 336, 1785, 1827
TasI AATT 8 cut(s) 133, 560, 1022, 1035, 1137, 1312, 1424, 1446
TatI WGTACW 4 cut(s) 105, 378, 583, 1671
TauI GCSGC 2 cut(s) 158, 1863
TfiI GAWTC 5 cut(s) 338, 415, 765, 1133, 1258
Tru1I TTAA 8 cut(s) 164, 188, 474, 482, 959, 1412, 1668, 1760
Tru9I TTAA 8 cut(s) 164, 188, 474, 482, 959, 1412, 1668, 1760
TscAI CASTG 3 cut(s) 209, 396, 1192
TseFI GTSAC 2 cut(s) 863, 1483
TseI GCWGC 3 cut(s) 611, 833, 1652
Tsp45I GTSAC 2 cut(s) 863, 1483
TspDTI ATGAA 7 cut(s) 53, 305, 800, 981, 1353, 1495, 1581
TspGWI ACGGA 1 cut(s) 1813
TspRI CASTG 3 cut(s) 209, 396, 1192
Tth111I GACNNNGTC 1 cut(s) 1436
Van91I CCANNNNNTGG 1 cut(s) 1118
VpaK11BI GGWCC 3 cut(s) 1223, 1288, 1821
XapI RAATTY 1 cut(s) 1312
XmiI GTMKAC 3 cut(s) 507, 1173, 1182
XspI CTAG 4 cut(s) 369, 896, 1317, 1353
ZrmI AGTACT 2 cut(s) 585, 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.