MD04G1069300.v1.1
TCP Family

Transcription factor TCP9-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0016324
Physical Location & Seq
Forward (+)
9490696 .. 9491838
1143 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1069300.v1.1.491

Sequence Viewer

Length: 1143 bp
ATGACGTCGTATTTGGAGGATCAGGACGAAAACGGAGGTGCCTCTGATCTCAGCACCAGCACCGGAGACCCGGGAGACAACGATCATACCAACGGAGACGGTGTCGTTTCGATGCAACCCAACTGCGAAGAAACGACGGAGTTCCATTCGCTGAAGGAGGAGCCCATTGACTCCGACCCACAACAACCGCCGCAGGGTCACCCCATCGGAATGCTCCCGGACACGATGCAAATGCCCGTGCCCATGTCCGTACAGCTTCCCGTCTCTGCCCCGACCCGACGATCCTCCACCAAGGACCGCCATACGAAAGTTGAGGGCCGCGGCCGGCGGATCAGAATACCCGCTACCTGCGCTGCCAGGATCTTCCAGCTGACACGGGAACTCGGCCACAAGTCCGACGGAGAAACCGTCCGTTGGCTGCTCGAACACGCCGAGCAAGCCATCATTGAAGCCACAGGCACCGGGACCGTTCCCGCCATCGCCGTCTCCGTCGGAGGGACACTCAAGATACCCACCACCTCATCCACGTCGGTCGAGGACAACTCCTCGCCAACCTCCGCAACCAAGAAGCGAAAACGCCCCTCCAATTCCGAATTCGTGGATGTGAGAAAGGACGCCGTGTCACAGTCGTCGGGCCTTGCTCCGGTGGGTCCCGCCGCTCCACAAGGTCTTGTTCCGGTGTGGGCAGTGGGCGGCGCCGGGTTGATCGTTCCGGCAAATGCGTTCTGGATGGGCCCGGTGGGGTCGGGGGCGGGATCTCCTGGTCCACAACCGCAGATATGGGCCCTATCTCCGACGATGACACCGGTTTTTAACATGGCGGGAGCAGCCGGGCCCATATCGAGTTTCGTGGTGAACAGCGGAGGAGGAGCAGGAGGAGTGGATGTTCGGGCTCCATCTCCAGCGCTGTCGAACTCGGCGGCGAGTACGAGCACGGTGGGAGCGAGGGCAGCCAAGAGGTCGTCAACGACAATGGCGCCGCCGAGCGTGAGCTCCTCGAGCAACAACAGTAACGGCAGCGGAAGCGGCGCGACGACCAAGACACAGATGCTAAGGGATTTTTCTCTGGAAATTTACGATAAGCAGGAGTTGAAGTTCATGGGTCAACCCATTGGACCGGCACATCAACAACAGACCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TCP

Protein Analysis

381

Amino Acids

39.35

Weight (kDa)

5.83

Isoelectric Point (pI)

55.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TCP PF03634 96 - 193 2e-26 TCP family transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016324)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g01340
malus_domestica MD04G1069300.v1.1 MD06G1070100.v1.1
prunus_persica Prupe.5G088800_v2.0.a1
pyrus_communis pycom04g06310 pycom06g07040
rosa_chinensis RchiOBHm_Chr7g0199561
rosa_laevigata RLG00000003785
rosa_roxburghii Rroxscaffold_3G00256610
rosa_rugosa Rorug07G0055300
rosa_samantha Rh7AG180100 Rh7BG183300 Rh7CG189100 Rh7DG182800
rosa_wichuraiana Rw7G015820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
Acc36I ACCTGC 1 cut(s) 356
AccB1I GGYRCC 4 cut(s) 38, 458, 695, 976
AccBSI CCGCTC 1 cut(s) 659
AccII CGCG 2 cut(s) 321, 1031
AclWI GGATC 5 cut(s) 27, 276, 338, 368, 763
AcoI YGGCCR 2 cut(s) 322, 385
AcsI RAATTY 2 cut(s) 593, 1071
AcuI CTGAAG 1 cut(s) 173
AcyI GRCGYC 4 cut(s) 5, 615, 696, 977
AfaI GTAC 2 cut(s) 252, 928
AfeI AGCGCT 1 cut(s) 906
AfiI CCNNNNNNNGG 4 cut(s) 194, 414, 495, 643
AgeI ACCGGT 1 cut(s) 805
AgsI TTSAA 2 cut(s) 449, 1093
AhdI GACNNNNNGTC 1 cut(s) 619
AjiI CACGTC 1 cut(s) 528
AjnI CCWGG 2 cut(s) 356, 760
AjuI GAANNNNNNNTTGG 2 cut(s) 578, 610
AloI GAACNNNNNNTCC 4 cut(s) 870, 902, 1079, 1111
AluBI AGCT 3 cut(s) 256, 370, 993
AluI AGCT 3 cut(s) 256, 370, 993
Alw21I GWGCWC 2 cut(s) 935, 995
Alw26I GTCTC 5 cut(s) 60, 69, 90, 268, 490
AlwI GGATC 5 cut(s) 27, 276, 338, 368, 763
Ama87I CYCGRG 2 cut(s) 70, 997
Aor51HI AGCGCT 1 cut(s) 906
AoxI GGCC 7 cut(s) 316, 322, 385, 634, 733, 783, 833
ApaI GGGCCC 3 cut(s) 737, 787, 837
ApeKI GCWGC 5 cut(s) 353, 418, 827, 950, 1017
ApoI RAATTY 2 cut(s) 593, 1071
ArsI GACNNNNNNTTYG 1 cut(s) 27
AsiGI ACCGGT 1 cut(s) 805
AspLEI GCGC 5 cut(s) 353, 698, 907, 979, 1031
AsuC2I CCSGG 7 cut(s) 71, 72, 218, 463, 700, 737, 832
AsuHPI GGTGA 2 cut(s) 191, 865
AvaI CYCGRG 2 cut(s) 70, 997
AvaII GGWCC 5 cut(s) 295, 465, 650, 764, 1115
BaeGI GKGCMC 4 cut(s) 243, 737, 787, 837
BanI GGYRCC 4 cut(s) 38, 458, 695, 976
BanII GRGCYC 6 cut(s) 165, 737, 787, 837, 895, 995
Bbv12I GWGCWC 2 cut(s) 935, 995
BbvI GCAGC 5 cut(s) 340, 405, 839, 962, 1029
BccI CCATC 5 cut(s) 212, 449, 485, 724, 904
BceAI ACGGC 3 cut(s) 467, 602, 1030
BcgI CGANNNNNNTGC 2 cut(s) 214, 248
BciT130I CCWGG 2 cut(s) 358, 762
BcnI CCSGG 7 cut(s) 71, 72, 218, 463, 700, 737, 832
BcoDI GTCTC 5 cut(s) 60, 69, 90, 268, 490
BfoI RGCGCY 3 cut(s) 699, 908, 980
BfuAI ACCTGC 1 cut(s) 356
Bme1390I CCNGG 9 cut(s) 71, 72, 218, 358, 463, 700, 737, 762, 832
Bme18I GGWCC 5 cut(s) 295, 465, 650, 764, 1115
BmeRI GACNNNNNGTC 1 cut(s) 619
BmeT110I CYCGRG 2 cut(s) 70, 997
BmgBI CACGTC 1 cut(s) 528
BmrFI CCNGG 9 cut(s) 71, 72, 218, 358, 463, 700, 737, 762, 832
BmrI ACTGGG 1 cut(s) 1132
BmsI GCATC 3 cut(s) 102, 216, 1038
BmuI ACTGGG 1 cut(s) 1132
BplI GAGNNNNNCTC 4 cut(s) 486, 518, 527, 559
BpmI CTGGAG 1 cut(s) 885
Bpu10I CCTNAGC 1 cut(s) 1052
BpuEI CTTGAG 1 cut(s) 488
BpuMI CCSGG 7 cut(s) 71, 72, 218, 463, 700, 737, 832
BsaHI GRCGYC 4 cut(s) 5, 615, 696, 977
BsaI GGTCTC 1 cut(s) 60
BsaJI CCNNGG 3 cut(s) 70, 291, 319
BsaWI WCCGGW 4 cut(s) 62, 643, 676, 805
BsaXI ACNNNNNCTCC 8 cut(s) 87, 117, 393, 423, 870, 900, 1079, 1109
Bsc4I CCNNNNNNNGG 4 cut(s) 194, 414, 495, 643
Bse118I RCCGGY 3 cut(s) 324, 805, 1117
Bse1I ACTGG 1 cut(s) 1138
BseBI CCWGG 2 cut(s) 358, 762
BseDI CCNNGG 3 cut(s) 70, 291, 319
BseGI GGATG 4 cut(s) 521, 607, 735, 889
BseLI CCNNNNNNNGG 4 cut(s) 194, 414, 495, 643
BseMII CTCAG 1 cut(s) 64
BseNI ACTGG 1 cut(s) 1138
BseRI GAGGAG 6 cut(s) 173, 535, 879, 882, 891, 985
BseSI GKGCMC 4 cut(s) 243, 737, 787, 837
BseX3I CGGCCG 1 cut(s) 322
BseXI GCAGC 5 cut(s) 340, 405, 839, 962, 1029
Bsh1236I CGCG 2 cut(s) 321, 1031
Bsh1285I CGRYCG 2 cut(s) 325, 534
BshFI GGCC 7 cut(s) 318, 324, 387, 636, 735, 785, 835
BshNI GGYRCC 4 cut(s) 38, 458, 695, 976
BshTI ACCGGT 1 cut(s) 805
BsiEI CGRYCG 2 cut(s) 325, 534
BsiHKAI GWGCWC 2 cut(s) 935, 995
BsiHKCI CYCGRG 2 cut(s) 70, 997
BslFI GGGAC 3 cut(s) 478, 511, 636
BslI CCNNNNNNNGG 4 cut(s) 194, 414, 495, 643
BsmAI GTCTC 5 cut(s) 60, 69, 90, 268, 490
BsmBI CGTCTC 3 cut(s) 90, 268, 490
BsmFI GGGAC 3 cut(s) 478, 511, 636
BsmI GAATGC 1 cut(s) 216
BsnI GGCC 7 cut(s) 318, 324, 387, 636, 735, 785, 835
Bso31I GGTCTC 1 cut(s) 60
BsoBI CYCGRG 2 cut(s) 70, 997
Bsp120I GGGCCC 3 cut(s) 733, 783, 833
Bsp1286I GDGCHC 8 cut(s) 165, 243, 737, 787, 837, 895, 935, 995
Bsp143I GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
BspANI GGCC 7 cut(s) 318, 324, 387, 636, 735, 785, 835
BspCNI CTCAG 1 cut(s) 63
BspFNI CGCG 2 cut(s) 321, 1031
BspMI ACCTGC 1 cut(s) 356
BspPI GGATC 5 cut(s) 27, 276, 338, 368, 763
BspT107I GGYRCC 4 cut(s) 38, 458, 695, 976
BspTNI GGTCTC 1 cut(s) 60
BsrBI CCGCTC 1 cut(s) 659
BsrFI RCCGGY 3 cut(s) 324, 805, 1117
BsrI ACTGG 1 cut(s) 1138
BssAI RCCGGY 3 cut(s) 324, 805, 1117
BssECI CCNNGG 3 cut(s) 70, 291, 319
BssMI GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
BssNI GRCGYC 4 cut(s) 5, 615, 696, 977
BssT1I CCWWGG 1 cut(s) 291
Bst2UI CCWGG 2 cut(s) 358, 762
Bst4CI ACNGT 6 cut(s) 101, 409, 469, 627, 937, 1010
BstACI GRCGYC 4 cut(s) 5, 615, 696, 977
BstC8I GCNNGC 2 cut(s) 326, 438
BstDEI CTNAG 2 cut(s) 50, 1052
BstDSI CCRYGG 1 cut(s) 319
BstEII GGTNACC 1 cut(s) 197
BstF5I GGATG 4 cut(s) 521, 607, 735, 889
BstFNI CGCG 2 cut(s) 321, 1031
BstH2I RGCGCY 3 cut(s) 699, 908, 980
BstHHI GCGC 5 cut(s) 353, 698, 907, 979, 1031
BstKTI GATC 8 cut(s) 22, 49, 85, 284, 333, 363, 708, 758
BstMAI GTCTC 5 cut(s) 60, 69, 90, 268, 490
BstMBI GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
BstMCI CGRYCG 2 cut(s) 325, 534
BstMWI GCNNNNNNNGC 7 cut(s) 350, 437, 827, 950, 999, 1023, 1026
BstNI CCWGG 2 cut(s) 358, 762
BstPI GGTNACC 1 cut(s) 197
BstSCI CCNGG 9 cut(s) 69, 70, 216, 356, 461, 698, 735, 760, 830
BstSLI GKGCMC 4 cut(s) 243, 737, 787, 837
BstUI CGCG 2 cut(s) 321, 1031
BstV1I GCAGC 5 cut(s) 340, 405, 839, 962, 1029
BstX2I RGATCY 2 cut(s) 360, 755
BstYI RGATCY 2 cut(s) 360, 755
BstZI CGGCCG 1 cut(s) 322
BsuRI GGCC 7 cut(s) 318, 324, 387, 636, 735, 785, 835
BtgI CCRYGG 1 cut(s) 319
BtgZI GCGATG 1 cut(s) 463
BtrI CACGTC 1 cut(s) 528
BtsCI GGATG 4 cut(s) 521, 607, 735, 889
BtsI GCAGTG 1 cut(s) 693
BtsIMutI CAGTG 1 cut(s) 693
BveI ACCTGC 1 cut(s) 356
Cac8I GCNNGC 2 cut(s) 326, 438
CfoI GCGC 5 cut(s) 353, 698, 907, 979, 1031
Cfr10I RCCGGY 3 cut(s) 324, 805, 1117
Cfr42I CCGCGG 1 cut(s) 322
Cfr9I CCCGGG 1 cut(s) 70
CseI GACGC 1 cut(s) 623
Csp6I GTAC 2 cut(s) 251, 927
CspAI ACCGGT 1 cut(s) 805
CviAII CATG 3 cut(s) 244, 817, 1099
CviQI GTAC 2 cut(s) 251, 927
DdeI CTNAG 2 cut(s) 50, 1052
DinI GGCGCC 2 cut(s) 697, 978
DpnI GATC 8 cut(s) 21, 48, 84, 283, 332, 362, 707, 757
DpnII GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
DriI GACNNNNNGTC 1 cut(s) 619
EaeI YGGCCR 2 cut(s) 322, 385
EagI CGGCCG 1 cut(s) 322
Eam1105I GACNNNNNGTC 1 cut(s) 619
EciI GGCGGA 1 cut(s) 343
Ecl136II GAGCTC 1 cut(s) 993
EclXI CGGCCG 1 cut(s) 322
Eco130I CCWWGG 1 cut(s) 291
Eco24I GRGCYC 6 cut(s) 165, 737, 787, 837, 895, 995
Eco31I GGTCTC 1 cut(s) 60
Eco47I GGWCC 5 cut(s) 295, 465, 650, 764, 1115
Eco47III AGCGCT 1 cut(s) 906
Eco52I CGGCCG 1 cut(s) 322
Eco53kI GAGCTC 1 cut(s) 993
Eco57I CTGAAG 1 cut(s) 173
Eco88I CYCGRG 2 cut(s) 70, 997
Eco91I GGTNACC 1 cut(s) 197
EcoICRI GAGCTC 1 cut(s) 993
EcoO109I RGGNCCY 2 cut(s) 650, 784
EcoO65I GGTNACC 1 cut(s) 197
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 2 cut(s) 356, 760
EcoT14I CCWWGG 1 cut(s) 291
EcoT38I GRGCYC 6 cut(s) 165, 737, 787, 837, 895, 995
EgeI GGCGCC 2 cut(s) 697, 978
EheI GGCGCC 2 cut(s) 697, 978
ErhI CCWWGG 1 cut(s) 291
Esp3I CGTCTC 3 cut(s) 90, 268, 490
FaeI CATG 3 cut(s) 247, 820, 1102
FaiI YATR 7 cut(s) 87, 245, 303, 781, 818, 839, 1100
FaqI GGGAC 3 cut(s) 478, 511, 636
FatI CATG 3 cut(s) 243, 816, 1098
FauI CCCGC 5 cut(s) 349, 481, 661, 745, 814
FokI GGATG 4 cut(s) 508, 614, 742, 896
FriOI GRGCYC 6 cut(s) 165, 737, 787, 837, 895, 995
GlaI GCGC 5 cut(s) 352, 697, 906, 978, 1030
GsuI CTGGAG 1 cut(s) 885
HaeII RGCGCY 3 cut(s) 699, 908, 980
HaeIII GGCC 7 cut(s) 318, 324, 387, 636, 735, 785, 835
HgaI GACGC 1 cut(s) 623
HhaI GCGC 5 cut(s) 353, 698, 907, 979, 1031
Hin1I GRCGYC 4 cut(s) 5, 615, 696, 977
Hin1II CATG 3 cut(s) 247, 820, 1102
Hin6I GCGC 5 cut(s) 351, 696, 905, 977, 1029
HinP1I GCGC 5 cut(s) 351, 696, 905, 977, 1029
HincII GTYRAC 2 cut(s) 966, 1106
HindII GTYRAC 2 cut(s) 966, 1106
HinfI GANTC 1 cut(s) 170
HphI GGTGA 2 cut(s) 191, 865
Hpy166II GTNNAC 4 cut(s) 767, 856, 966, 1106
Hpy188I TCNGA 8 cut(s) 46, 175, 209, 335, 397, 494, 592, 795
Hpy188III TCNNGA 4 cut(s) 23, 505, 727, 1067
Hpy8I GTNNAC 4 cut(s) 767, 856, 966, 1106
Hpy99I CGWCG 9 cut(s) 10, 139, 282, 401, 494, 532, 634, 799, 1036
HpyAV CCTTC 1 cut(s) 148
HpyCH4III ACNGT 6 cut(s) 101, 409, 469, 627, 937, 1010
HpyCH4IV ACGT 2 cut(s) 5, 527
HpyCH4V TGCA 2 cut(s) 115, 229
HpyF10VI GCNNNNNNNGC 7 cut(s) 350, 437, 827, 950, 999, 1023, 1026
HpyF3I CTNAG 2 cut(s) 50, 1052
HpySE526I ACGT 2 cut(s) 5, 527
Hsp92I GRCGYC 4 cut(s) 5, 615, 696, 977
Hsp92II CATG 3 cut(s) 247, 820, 1102
HspAI GCGC 5 cut(s) 351, 696, 905, 977, 1029
KasI GGCGCC 2 cut(s) 695, 976
KflI GGGWCCC 1 cut(s) 650
KroI GCCGGC 1 cut(s) 324
KroNI GCCGGC 1 cut(s) 326
KspI CCGCGG 1 cut(s) 322
Kzo9I GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
LmnI GCTCC 9 cut(s) 160, 219, 646, 664, 824, 869, 898, 941, 998
Lsp1109I GCAGC 5 cut(s) 340, 405, 839, 962, 1029
LweI GCATC 3 cut(s) 102, 216, 1038
MaeII ACGT 2 cut(s) 5, 527
MaeIII GTNAC 3 cut(s) 197, 621, 1010
MalI GATC 8 cut(s) 21, 48, 84, 283, 332, 362, 707, 757
MbiI CCGCTC 1 cut(s) 659
MboI GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
MboII GAAGA 2 cut(s) 140, 355
MflI RGATCY 2 cut(s) 360, 755
MhlI GDGCHC 8 cut(s) 165, 243, 737, 787, 837, 895, 935, 995
MluCI AATT 3 cut(s) 586, 593, 1071
Mly113I GGCGCC 2 cut(s) 696, 977
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 4 cut(s) 198, 420, 472, 818
MroNI GCCGGC 1 cut(s) 324
MseI TTAA 1 cut(s) 813
MslI CAYNNNNRTG 1 cut(s) 209
MspA1I CMGCKG 4 cut(s) 321, 370, 861, 1020
MspR9I CCNGG 9 cut(s) 71, 72, 218, 358, 463, 700, 737, 762, 832
Mva1269I GAATGC 1 cut(s) 216
MvaI CCWGG 2 cut(s) 358, 762
MvnI CGCG 2 cut(s) 321, 1031
MwoI GCNNNNNNNGC 7 cut(s) 350, 437, 827, 950, 999, 1023, 1026
NaeI GCCGGC 1 cut(s) 326
NarI GGCGCC 2 cut(s) 696, 977
NciI CCSGG 7 cut(s) 71, 72, 218, 463, 700, 737, 832
NdeII GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
NgoMIV GCCGGC 1 cut(s) 324
NlaIII CATG 3 cut(s) 247, 820, 1102
NmeAIII GCCGAG 4 cut(s) 363, 457, 896, 1008
NmuCI GTSAC 2 cut(s) 197, 621
PaeR7I CTCGAG 1 cut(s) 997
PcsI WCGNNNNNNNCGW 4 cut(s) 405, 429, 486, 941
PctI GAATGC 1 cut(s) 216
PdiI GCCGGC 1 cut(s) 326
PflFI GACNNNGTC 1 cut(s) 101
PfoI TCCNGGA 1 cut(s) 216
PinAI ACCGGT 1 cut(s) 805
PleI GAGTC 1 cut(s) 164
PluTI GGCGCC 2 cut(s) 699, 980
PpsI GAGTC 1 cut(s) 164
PpuMI RGGWCCY 1 cut(s) 650
Psp124BI GAGCTC 1 cut(s) 995
Psp5II RGGWCCY 1 cut(s) 650
Psp6I CCWGG 2 cut(s) 356, 760
PspEI GGTNACC 1 cut(s) 197
PspGI CCWGG 2 cut(s) 356, 760
PspOMI GGGCCC 3 cut(s) 733, 783, 833
PspPPI RGGWCCY 1 cut(s) 650
PspXI VCTCGAGB 1 cut(s) 997
PsuI RGATCY 2 cut(s) 360, 755
PsyI GACNNNGTC 1 cut(s) 101
PvuII CAGCTG 1 cut(s) 370
RsaI GTAC 2 cut(s) 252, 928
RsaNI GTAC 2 cut(s) 251, 927
RseI CAYNNNNRTG 1 cut(s) 209
SacI GAGCTC 1 cut(s) 995
SacII CCGCGG 1 cut(s) 322
SaqAI TTAA 1 cut(s) 813
Sau3AI GATC 8 cut(s) 19, 46, 82, 281, 330, 360, 705, 755
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 9 cut(s) 71, 72, 218, 358, 463, 700, 737, 762, 832
SduI GDGCHC 8 cut(s) 165, 243, 737, 787, 837, 895, 935, 995
SfaNI GCATC 3 cut(s) 102, 216, 1038
SfoI GGCGCC 2 cut(s) 697, 978
Sfr274I CTCGAG 1 cut(s) 997
Sfr303I CCGCGG 1 cut(s) 322
SgrBI CCGCGG 1 cut(s) 322
SinI GGWCC 5 cut(s) 295, 465, 650, 764, 1115
SlaI CTCGAG 1 cut(s) 997
SmaI CCCGGG 1 cut(s) 72
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 2 cut(s) 503, 997
SmoI CTYRAG 2 cut(s) 503, 997
Sse9I AATT 3 cut(s) 586, 593, 1071
SspDI GGCGCC 2 cut(s) 695, 976
SstI GAGCTC 1 cut(s) 995
StyD4I CCNGG 9 cut(s) 69, 70, 216, 356, 461, 698, 735, 760, 830
StyI CCWWGG 1 cut(s) 291
TaaI ACNGT 6 cut(s) 101, 409, 469, 627, 937, 1010
TaiI ACGT 2 cut(s) 8, 530
TaqI TCGA 6 cut(s) 110, 423, 534, 842, 911, 998
TaqII GACCGA 1 cut(s) 520
TasI AATT 3 cut(s) 586, 593, 1071
TauI GCSGC 8 cut(s) 193, 321, 324, 659, 696, 923, 982, 1029
Tru1I TTAA 1 cut(s) 813
Tru9I TTAA 1 cut(s) 813
TscAI CASTG 1 cut(s) 693
TseFI GTSAC 2 cut(s) 197, 621
TseI GCWGC 5 cut(s) 353, 418, 827, 950, 1017
Tsp45I GTSAC 2 cut(s) 197, 621
TspDTI ATGAA 1 cut(s) 1087
TspGWI ACGGA 7 cut(s) 48, 108, 152, 238, 401, 414, 478
TspMI CCCGGG 1 cut(s) 70
TspRI CASTG 1 cut(s) 693
Tth111I GACNNNGTC 1 cut(s) 101
VpaK11BI GGWCC 5 cut(s) 295, 465, 650, 764, 1115
XapI RAATTY 2 cut(s) 593, 1071
XhoI CTCGAG 1 cut(s) 997
XmaI CCCGGG 1 cut(s) 70
ZraI GACGTC 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.