RLG00000003785
TCP Family

Transcription factor TCP9-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0016324
Physical Location & Seq
Reverse (-)
52680595 .. 52682181
1587 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003785

Sequence Viewer

Length: 1338 bp
ATGACGTCGTATTTTGAGGATCAAGAAGACGACGGAGGAGGAGCCGGTTCCGATCACAGCACCAGCACCGGCGACCCGGAGGAGAACCGGAACAGTGATGACAACAGGAACCGAGTCTTCTTTTCGAGGCAGCCGGCTAATTTTGACGAAACGGCGATGCCTCTGAAGATGGAGCCCATTGACTCGGACCCACCGACGGACTCTGACCACCGGGCCCACCCGCAACCGCCGCAGGCTCCGTCCGTCGGAATGGTCCCCATGGCGGCGATGCAGATGCAAATGCCCGTGCCGGTGTCCTCCTCCGCCGCCGCTAGGCGCTCCTCCACCAAGGACCGCCACACGAAGGTCGAGGGCCGCGGCCGCAGGATCCGGATACCCGCCACTTGCGCTGCTCGGATCTTCCAGCTGACCCGGGAGCTGGGGCACAAATCCGACGGCGAAACGGTGCGGTGGCTCCTCGAACACGCCGAGCAGGCCATAATCGAAGCCACCGGCACCGGCACTGTCCCGGCCATCGCCGTCTCCGTCGGTGGGACCCTCAAGATCCCCACCACGCCCAGCTACCACAACCCGACCGACGACTCGCAGACCTCGGCGGCCAAGAAGCGGAAGCGCCCCTCCAACAGCGAGTTCGTGGACCTAAGCGACGCCGTATCGCAGTCCTCGGGGCTCGCTCCGGTGGGGCCCTCGACTGCCCAGCCCGTCCCTCAAGGCCTGGTCCCCGTCTGGGCCGTGGGCAACGCCGGCATGATGGTCCCTGCCAACGCCTTCTGGATGATTCCACCAAACGGTTCGGGTCAGGTCGTCTCCTCCGCCGGCCCGTCCAGCCAAGCACCGCAAATTTGGGCCTTGTCCCCGACTATGACGCCGGTGTTCAACGTGGCCGCGGCCCGGCCCGTATCGACGACGTTCATGGCGAACGGCGGAGTGGAGGTTCGCGGTCCGTCGCCGGCGCTGTCGAACTCGGCGGTGAGCACGAGCACGGTGGGGTCGAAGGCGGCGAAGAAGTCGTCGTCGACAATGGCGCCGAGCGTGAGCTCCAGTGGTAGTGGTAACAGTAACAACGGTAGTGGCAGAAAAGCTCAGATGCTTAGGGATTTTACTCTAGAGATTTACGATAAGCAGGAGCTGCAGTTCATGGTTGAAGAAATGAGATTGAAAGACGCATCCCAATTGGGGTTTTGTGGAGTAGTTGCAGGGTGTAGATGGTGGGGAAGGCGGAGTTCGTTGGAGCTGGGTGGGGACGGTGGTGGTGGTAGCATGGTGGTCGACCTGCAAATGGTGGGTCAAGCGAGCCCAAAATCGGGGTTTATCCGAAGCTACAGTGGCCCACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TCP

Protein Analysis

446

Amino Acids

46.85

Weight (kDa)

6.67

Isoelectric Point (pI)

60.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TCP PF03634 108 - 196 2.5e-25 TCP family transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016324)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g01340
malus_domestica MD04G1069300.v1.1 MD06G1070100.v1.1
prunus_persica Prupe.5G088800_v2.0.a1
pyrus_communis pycom04g06310 pycom06g07040
rosa_chinensis RchiOBHm_Chr7g0199561
rosa_laevigata RLG00000003785
rosa_roxburghii Rroxscaffold_3G00256610
rosa_rugosa Rorug07G0055300
rosa_samantha Rh7AG180100 Rh7BG183300 Rh7CG189100 Rh7DG182800
rosa_wichuraiana Rw7G015820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
Acc36I ACCTGC 1 cut(s) 1281
AccB1I GGYRCC 2 cut(s) 494, 1024
AccI GTMKAC 2 cut(s) 1016, 1269
AccII CGCG 3 cut(s) 357, 887, 939
AccIII TCCGGA 1 cut(s) 369
AclWI GGATC 5 cut(s) 27, 361, 374, 404, 538
AcoI YGGCCR 4 cut(s) 358, 510, 597, 882
AcsI RAATTY 1 cut(s) 840
AcuI CTGAAG 1 cut(s) 185
AcyI GRCGYC 4 cut(s) 5, 648, 866, 1025
AgsI TTSAA 3 cut(s) 877, 1145, 1159
AjnI CCWGG 1 cut(s) 714
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AloI GAACNNNNNNTCC 4 cut(s) 918, 950, 1118, 1150
AluBI AGCT 8 cut(s) 406, 418, 561, 1038, 1082, 1129, 1234, 1320
AluI AGCT 8 cut(s) 406, 418, 561, 1038, 1082, 1129, 1234, 1320
Alw21I GWGCWC 3 cut(s) 977, 983, 1040
Alw26I GTCTC 2 cut(s) 526, 811
AlwI GGATC 5 cut(s) 27, 361, 374, 404, 538
AlwNI CAGNNNCTG 1 cut(s) 1129
Ama87I CYCGRG 2 cut(s) 411, 664
Aor13HI TCCGGA 1 cut(s) 369
ApaI GGGCCC 2 cut(s) 217, 687
ApeKI GCWGC 3 cut(s) 130, 389, 1129
ApoI RAATTY 1 cut(s) 840
ArsI GACNNNNNNTTYG 4 cut(s) 995, 1027, 1270, 1302
AspLEI GCGC 5 cut(s) 318, 389, 615, 955, 1027
AsuC2I CCSGG 6 cut(s) 77, 212, 412, 413, 509, 892
AsuHPI GGTGA 1 cut(s) 982
AvaI CYCGRG 2 cut(s) 411, 664
AvaII GGWCC 8 cut(s) 187, 253, 331, 534, 637, 718, 754, 941
BaeGI GKGCMC 3 cut(s) 217, 426, 687
BamHI GGATCC 1 cut(s) 366
BanI GGYRCC 2 cut(s) 494, 1024
BanII GRGCYC 6 cut(s) 177, 217, 672, 687, 1040, 1298
BauI CACGAG 1 cut(s) 976
BbsI GAAGAC 2 cut(s) 33, 109
Bbv12I GWGCWC 3 cut(s) 977, 983, 1040
BbvI GCAGC 3 cut(s) 142, 376, 1116
BccI CCATC 4 cut(s) 163, 521, 745, 1200
BceAI ACGGC 6 cut(s) 168, 451, 503, 635, 716, 937
BcgI CGANNNNNNTGC 4 cut(s) 256, 290, 1249, 1283
BciT130I CCWGG 1 cut(s) 716
BciVI GTATCC 1 cut(s) 366
BcnI CCSGG 6 cut(s) 77, 212, 412, 413, 509, 892
BcoDI GTCTC 2 cut(s) 526, 811
BfaI CTAG 3 cut(s) 312, 1106, 1336
BfmI CTRYAG 2 cut(s) 1130, 1321
BfoI RGCGCY 4 cut(s) 319, 616, 956, 1028
BfuAI ACCTGC 1 cut(s) 1281
BfuI GTATCC 1 cut(s) 366
BglI GCCNNNNNGGC 1 cut(s) 473
Bme1390I CCNGG 7 cut(s) 77, 212, 412, 413, 509, 716, 892
Bme18I GGWCC 8 cut(s) 187, 253, 331, 534, 637, 718, 754, 941
BmeT110I CYCGRG 2 cut(s) 411, 664
BmrFI CCNGG 7 cut(s) 77, 212, 412, 413, 509, 716, 892
BmsI GCATC 5 cut(s) 147, 258, 264, 1077, 1175
BpiI GAAGAC 2 cut(s) 33, 109
BpmI CTGGAG 1 cut(s) 1024
Bpu10I CCTNAGC 2 cut(s) 641, 1091
BpuEI CTTGAG 2 cut(s) 524, 693
BpuMI CCSGG 6 cut(s) 77, 212, 412, 413, 509, 892
BsaHI GRCGYC 4 cut(s) 5, 648, 866, 1025
BsaJI CCNNGG 8 cut(s) 258, 327, 355, 411, 591, 663, 732, 885
BsaWI WCCGGW 3 cut(s) 87, 369, 676
BsaXI ACNNNNNCTCC 4 cut(s) 918, 948, 1118, 1148
Bse1I ACTGG 1 cut(s) 1041
BseAI TCCGGA 1 cut(s) 369
BseBI CCWGG 1 cut(s) 716
BseDI CCNNGG 8 cut(s) 258, 327, 355, 411, 591, 663, 732, 885
BseGI GGATG 2 cut(s) 780, 1166
BseMII CTCAG 1 cut(s) 1097
BseNI ACTGG 1 cut(s) 1041
BseRI GAGGAG 7 cut(s) 51, 54, 95, 289, 310, 446, 799
BseSI GKGCMC 3 cut(s) 217, 426, 687
BseX3I CGGCCG 1 cut(s) 358
BseXI GCAGC 3 cut(s) 142, 376, 1116
BseYI CCCAGC 4 cut(s) 418, 557, 696, 1234
Bsh1236I CGCG 3 cut(s) 357, 887, 939
Bsh1285I CGRYCG 2 cut(s) 361, 576
BshNI GGYRCC 2 cut(s) 494, 1024
BsiEI CGRYCG 2 cut(s) 361, 576
BsiHKAI GWGCWC 3 cut(s) 977, 983, 1040
BsiHKCI CYCGRG 2 cut(s) 411, 664
BslFI GGGAC 8 cut(s) 239, 491, 547, 689, 704, 740, 838, 1256
BsmAI GTCTC 2 cut(s) 526, 811
BsmBI CGTCTC 2 cut(s) 526, 811
BsmFI GGGAC 8 cut(s) 239, 491, 547, 689, 704, 740, 838, 1256
BsoBI CYCGRG 2 cut(s) 411, 664
Bsp120I GGGCCC 2 cut(s) 213, 683
Bsp1286I GDGCHC 9 cut(s) 177, 217, 426, 672, 687, 977, 983, 1040, 1298
Bsp13I TCCGGA 1 cut(s) 369
Bsp143I GATC 5 cut(s) 19, 52, 366, 396, 543
Bsp19I CCATGG 1 cut(s) 258
BspCNI CTCAG 1 cut(s) 1096
BspEI TCCGGA 1 cut(s) 369
BspFNI CGCG 3 cut(s) 357, 887, 939
BspMAI CTGCAG 1 cut(s) 1134
BspMI ACCTGC 1 cut(s) 1281
BspPI GGATC 5 cut(s) 27, 361, 374, 404, 538
BspT107I GGYRCC 2 cut(s) 494, 1024
BsrI ACTGG 1 cut(s) 1041
BssECI CCNNGG 8 cut(s) 258, 327, 355, 411, 591, 663, 732, 885
BssMI GATC 5 cut(s) 19, 52, 366, 396, 543
BssNI GRCGYC 4 cut(s) 5, 648, 866, 1025
BssSI CACGAG 1 cut(s) 976
BssT1I CCWWGG 2 cut(s) 258, 327
Bst2BI CACGAG 1 cut(s) 976
Bst2UI CCWGG 1 cut(s) 716
Bst4CI ACNGT 9 cut(s) 95, 445, 505, 791, 985, 1058, 1067, 1247, 1325
BstACI GRCGYC 4 cut(s) 5, 648, 866, 1025
BstAPI GCANNNNNTGC 1 cut(s) 1129
BstC8I GCNNGC 8 cut(s) 135, 234, 474, 672, 745, 817, 951, 1294
BstDEI CTNAG 3 cut(s) 641, 1083, 1091
BstDSI CCRYGG 4 cut(s) 258, 355, 732, 885
BstF5I GGATG 2 cut(s) 780, 1166
BstFNI CGCG 3 cut(s) 357, 887, 939
BstH2I RGCGCY 4 cut(s) 319, 616, 956, 1028
BstHHI GCGC 5 cut(s) 318, 389, 615, 955, 1027
BstKTI GATC 5 cut(s) 22, 55, 369, 399, 546
BstMAI GTCTC 2 cut(s) 526, 811
BstMBI GATC 5 cut(s) 19, 52, 366, 396, 543
BstMCI CGRYCG 2 cut(s) 361, 576
BstMWI GCNNNNNNNGC 8 cut(s) 229, 360, 386, 473, 744, 825, 1129, 1326
BstNI CCWGG 1 cut(s) 716
BstSCI CCNGG 7 cut(s) 75, 210, 410, 411, 507, 714, 890
BstSFI CTRYAG 2 cut(s) 1130, 1321
BstSLI GKGCMC 3 cut(s) 217, 426, 687
BstUI CGCG 3 cut(s) 357, 887, 939
BstV1I GCAGC 3 cut(s) 142, 376, 1116
BstV2I GAAGAC 2 cut(s) 33, 109
BstX2I RGATCY 3 cut(s) 366, 396, 543
BstYI RGATCY 3 cut(s) 366, 396, 543
BstZI CGGCCG 1 cut(s) 358
BsuI GTATCC 1 cut(s) 366
BtgI CCRYGG 4 cut(s) 258, 355, 732, 885
BtgZI GCGATG 3 cut(s) 170, 281, 499
BtsCI GGATG 2 cut(s) 780, 1166
BtsIMutI CAGTG 4 cut(s) 100, 501, 1048, 1330
BveI ACCTGC 1 cut(s) 1281
Cac8I GCNNGC 8 cut(s) 135, 234, 474, 672, 745, 817, 951, 1294
CaiI CAGNNNCTG 1 cut(s) 1129
CciNI GCGGCCGC 1 cut(s) 358
CfoI GCGC 5 cut(s) 318, 389, 615, 955, 1027
Cfr42I CCGCGG 2 cut(s) 358, 888
Cfr9I CCCGGG 1 cut(s) 411
CpoI CGGWCCG 1 cut(s) 941
CseI GACGC 3 cut(s) 656, 874, 1172
CspCI CAANNNNNGTGG 2 cut(s) 1051, 1086
CspI CGGWCCG 1 cut(s) 941
CviAII CATG 5 cut(s) 259, 748, 913, 1138, 1261
DdeI CTNAG 3 cut(s) 641, 1083, 1091
DinI GGCGCC 1 cut(s) 1026
DpnI GATC 5 cut(s) 21, 54, 368, 398, 545
DpnII GATC 5 cut(s) 19, 52, 366, 396, 543
EaeI YGGCCR 4 cut(s) 358, 510, 597, 882
EagI CGGCCG 1 cut(s) 358
EciI GGCGGA 4 cut(s) 292, 802, 939, 1234
Ecl136II GAGCTC 1 cut(s) 1038
EclXI CGGCCG 1 cut(s) 358
Eco130I CCWWGG 2 cut(s) 258, 327
Eco147I AGGCCT 1 cut(s) 714
Eco24I GRGCYC 6 cut(s) 177, 217, 672, 687, 1040, 1298
Eco47I GGWCC 8 cut(s) 187, 253, 331, 534, 637, 718, 754, 941
Eco52I CGGCCG 1 cut(s) 358
Eco53kI GAGCTC 1 cut(s) 1038
Eco57I CTGAAG 1 cut(s) 185
Eco88I CYCGRG 2 cut(s) 411, 664
EcoICRI GAGCTC 1 cut(s) 1038
EcoO109I RGGNCCY 3 cut(s) 534, 683, 684
EcoRII CCWGG 1 cut(s) 714
EcoT14I CCWWGG 2 cut(s) 258, 327
EcoT38I GRGCYC 6 cut(s) 177, 217, 672, 687, 1040, 1298
EgeI GGCGCC 1 cut(s) 1026
EheI GGCGCC 1 cut(s) 1026
ErhI CCWWGG 2 cut(s) 258, 327
Esp3I CGTCTC 2 cut(s) 526, 811
FaeI CATG 5 cut(s) 262, 751, 916, 1141, 1264
FaiI YATR 7 cut(s) 260, 479, 749, 863, 914, 1139, 1262
FaqI GGGAC 8 cut(s) 239, 491, 547, 689, 704, 740, 838, 1256
FatI CATG 5 cut(s) 258, 747, 912, 1137, 1260
FauI CCCGC 2 cut(s) 228, 385
FblI GTMKAC 2 cut(s) 1016, 1269
FokI GGATG 2 cut(s) 787, 1153
FriOI GRGCYC 6 cut(s) 177, 217, 672, 687, 1040, 1298
FspBI CTAG 3 cut(s) 312, 1106, 1336
GlaI GCGC 5 cut(s) 317, 388, 614, 954, 1026
GsaI CCCAGC 4 cut(s) 422, 561, 700, 1238
GsuI CTGGAG 1 cut(s) 1024
HaeII RGCGCY 4 cut(s) 319, 616, 956, 1028
HgaI GACGC 3 cut(s) 656, 874, 1172
HhaI GCGC 5 cut(s) 318, 389, 615, 955, 1027
Hin1I GRCGYC 4 cut(s) 5, 648, 866, 1025
Hin1II CATG 5 cut(s) 262, 751, 916, 1141, 1264
Hin6I GCGC 5 cut(s) 316, 387, 613, 953, 1025
HinP1I GCGC 5 cut(s) 316, 387, 613, 953, 1025
HincII GTYRAC 2 cut(s) 1017, 1270
HindII GTYRAC 2 cut(s) 1017, 1270
HinfI GANTC 5 cut(s) 114, 182, 200, 581, 778
HphI GGTGA 1 cut(s) 982
Hpy166II GTNNAC 3 cut(s) 637, 1017, 1270
Hpy188I TCNGA 9 cut(s) 52, 165, 187, 205, 248, 396, 433, 1086, 1316
Hpy188III TCNNGA 5 cut(s) 23, 370, 541, 772, 1106
Hpy8I GTNNAC 3 cut(s) 637, 1017, 1270
HpyAV CCTTC 4 cut(s) 337, 778, 988, 1209
HpyCH4III ACNGT 9 cut(s) 95, 445, 505, 791, 985, 1058, 1067, 1247, 1325
HpyCH4IV ACGT 3 cut(s) 5, 879, 908
HpyCH4V TGCA 5 cut(s) 271, 277, 1132, 1196, 1276
HpyF10VI GCNNNNNNNGC 8 cut(s) 229, 360, 386, 473, 744, 825, 1129, 1326
HpyF3I CTNAG 3 cut(s) 641, 1083, 1091
HpySE526I ACGT 3 cut(s) 5, 879, 908
Hsp92I GRCGYC 4 cut(s) 5, 648, 866, 1025
Hsp92II CATG 5 cut(s) 262, 751, 916, 1141, 1264
HspAI GCGC 5 cut(s) 316, 387, 613, 953, 1025
KasI GGCGCC 1 cut(s) 1024
KflI GGGWCCC 1 cut(s) 534
Kpn2I TCCGGA 1 cut(s) 369
KroI GCCGGC 4 cut(s) 133, 743, 815, 949
KroNI GCCGGC 4 cut(s) 135, 745, 817, 951
KspI CCGCGG 2 cut(s) 358, 888
Kzo9I GATC 5 cut(s) 19, 52, 366, 396, 543
Lsp1109I GCAGC 3 cut(s) 142, 376, 1116
LweI GCATC 5 cut(s) 147, 258, 264, 1077, 1175
MaeI CTAG 3 cut(s) 312, 1106, 1336
MaeII ACGT 3 cut(s) 5, 879, 908
MaeIII GTNAC 2 cut(s) 1052, 1058
MalI GATC 5 cut(s) 21, 54, 368, 398, 545
MboI GATC 5 cut(s) 19, 52, 366, 396, 543
MboII GAAGA 6 cut(s) 38, 109, 178, 391, 1015, 1157
MfeI CAATTG 1 cut(s) 1172
MflI RGATCY 3 cut(s) 366, 396, 543
MhlI GDGCHC 9 cut(s) 177, 217, 426, 672, 687, 977, 983, 1040, 1298
MluCI AATT 3 cut(s) 139, 840, 1172
Mly113I GGCGCC 1 cut(s) 1025
MlyI GAGTC 4 cut(s) 123, 176, 194, 575
MmeI TCCRAC 4 cut(s) 226, 456, 645, 1209
MreI CGCCGGCG 1 cut(s) 949
MroI TCCGGA 1 cut(s) 369
MroNI GCCGGC 4 cut(s) 133, 743, 815, 949
MspA1I CMGCKG 3 cut(s) 357, 406, 887
MspR9I CCNGG 7 cut(s) 77, 212, 412, 413, 509, 716, 892
MunI CAATTG 1 cut(s) 1172
MvaI CCWGG 1 cut(s) 716
MvnI CGCG 3 cut(s) 357, 887, 939
MwoI GCNNNNNNNGC 8 cut(s) 229, 360, 386, 473, 744, 825, 1129, 1326
NaeI GCCGGC 4 cut(s) 135, 745, 817, 951
NarI GGCGCC 1 cut(s) 1025
NciI CCSGG 6 cut(s) 77, 212, 412, 413, 509, 892
NcoI CCATGG 1 cut(s) 258
NdeII GATC 5 cut(s) 19, 52, 366, 396, 543
NgoMIV GCCGGC 4 cut(s) 133, 743, 815, 949
NlaIII CATG 5 cut(s) 262, 751, 916, 1141, 1264
NmeAIII GCCGAG 4 cut(s) 493, 572, 944, 1053
NotI GCGGCCGC 1 cut(s) 358
PceI AGGCCT 1 cut(s) 714
PcsI WCGNNNNNNNCGW 6 cut(s) 191, 465, 522, 914, 989, 998
PdiI GCCGGC 4 cut(s) 135, 745, 817, 951
PfeI GAWTC 1 cut(s) 778
PleI GAGTC 4 cut(s) 122, 176, 194, 575
PluTI GGCGCC 1 cut(s) 1028
PpsI GAGTC 4 cut(s) 122, 176, 194, 575
PpuMI RGGWCCY 1 cut(s) 534
Psp124BI GAGCTC 1 cut(s) 1040
Psp5II RGGWCCY 1 cut(s) 534
Psp6I CCWGG 1 cut(s) 714
PspFI CCCAGC 4 cut(s) 418, 557, 696, 1234
PspGI CCWGG 1 cut(s) 714
PspOMI GGGCCC 2 cut(s) 213, 683
PspPPI RGGWCCY 1 cut(s) 534
PstI CTGCAG 1 cut(s) 1134
PstNI CAGNNNCTG 1 cut(s) 1129
PsuI RGATCY 3 cut(s) 366, 396, 543
PvuII CAGCTG 1 cut(s) 406
Rsr2I CGGWCCG 1 cut(s) 941
RsrII CGGWCCG 1 cut(s) 941
SacI GAGCTC 1 cut(s) 1040
SacII CCGCGG 2 cut(s) 358, 888
SalI GTCGAC 2 cut(s) 1015, 1268
Sau3AI GATC 5 cut(s) 19, 52, 366, 396, 543
SchI GAGTC 4 cut(s) 123, 176, 194, 575
ScrFI CCNGG 7 cut(s) 77, 212, 412, 413, 509, 716, 892
SduI GDGCHC 9 cut(s) 177, 217, 426, 672, 687, 977, 983, 1040, 1298
SfaNI GCATC 5 cut(s) 147, 258, 264, 1077, 1175
SfcI CTRYAG 2 cut(s) 1130, 1321
SfoI GGCGCC 1 cut(s) 1026
Sfr303I CCGCGG 2 cut(s) 358, 888
SgrAI CRCCGGYG 3 cut(s) 68, 868, 949
SgrBI CCGCGG 2 cut(s) 358, 888
SinI GGWCC 8 cut(s) 187, 253, 331, 534, 637, 718, 754, 941
SmaI CCCGGG 1 cut(s) 413
SmlI CTYRAG 2 cut(s) 539, 708
SmoI CTYRAG 2 cut(s) 539, 708
Sse9I AATT 3 cut(s) 139, 840, 1172
SseBI AGGCCT 1 cut(s) 714
SspDI GGCGCC 1 cut(s) 1024
SspMI CTAG 3 cut(s) 312, 1106, 1336
SstI GAGCTC 1 cut(s) 1040
StuI AGGCCT 1 cut(s) 714
StyD4I CCNGG 7 cut(s) 75, 210, 410, 411, 507, 714, 890
StyI CCWWGG 2 cut(s) 258, 327
TaaI ACNGT 9 cut(s) 95, 445, 505, 791, 985, 1058, 1067, 1247, 1325
TaiI ACGT 3 cut(s) 8, 882, 911
TaqII GACCGA 1 cut(s) 590
TasI AATT 3 cut(s) 139, 840, 1172
TfiI GAWTC 1 cut(s) 778
TscAI CASTG 4 cut(s) 100, 508, 1048, 1330
TseI GCWGC 3 cut(s) 130, 389, 1129
TspDTI ATGAA 2 cut(s) 901, 1126
TspGWI ACGGA 6 cut(s) 48, 212, 228, 232, 514, 933
TspMI CCCGGG 1 cut(s) 411
TspRI CASTG 4 cut(s) 100, 508, 1048, 1330
VpaK11BI GGWCC 8 cut(s) 187, 253, 331, 534, 637, 718, 754, 941
XapI RAATTY 1 cut(s) 840
XbaI TCTAGA 1 cut(s) 1105
XmaI CCCGGG 1 cut(s) 411
XmiI GTMKAC 2 cut(s) 1016, 1269
XspI CTAG 3 cut(s) 312, 1106, 1336
ZraI GACGTC 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.