MD04G1148800.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
23697380 .. 23698016
637 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1148800.v1.1.491

Sequence Viewer

Length: 333 bp
ATGTGGGACTTAATTGAATTGAATAAAGAGAGTGGGTTGGGGCATGAAGAGCGTATGGGGGTTGTCAGTTGGACACAATGTGAAATAAATATGATTTTTGTGCTTTACAAGTCACAAATTAGAAGGACAAGGACAAGGATTGTCTGCCTTCCTGTGTTCTTCTGTTTTGTGTGGTCACAGTTAAGCCACGTCAACATTTTATATTATTTTTTAGAGAGATACATGGGGATAAATGGTACCCAAAAAACTCACAAAAAGACAATGAGAGGCTACAAGAGGTTAAAATCGTTCCTCCAAATGCAGAGTGCCGGAAACACGGTTCGGTACACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

111

Amino Acids

13.18

Weight (kDa)

9.84

Isoelectric Point (pI)

44.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 236
AccB1I GGYRCC 1 cut(s) 236
AdeI CACNNNGTG 1 cut(s) 80
AfaI GTAC 2 cut(s) 238, 326
AgsI TTSAA 2 cut(s) 17, 22
AjiI CACGTC 1 cut(s) 190
AloI GAACNNNNNNTCC 1 cut(s) 303
Asp718I GGTACC 1 cut(s) 236
BanI GGYRCC 1 cut(s) 236
BfaI CTAG 1 cut(s) 331
BmgBI CACGTC 1 cut(s) 190
BmiI GGNNCC 1 cut(s) 238
BshNI GGYRCC 1 cut(s) 236
BsiSI CCGG 1 cut(s) 309
BslFI GGGAC 1 cut(s) 20
BsmFI GGGAC 1 cut(s) 20
BspLI GGNNCC 1 cut(s) 238
BspQI GCTCTTC 1 cut(s) 42
BspT107I GGYRCC 1 cut(s) 236
Bst4CI ACNGT 2 cut(s) 180, 319
Bst6I CTCTTC 1 cut(s) 42
BstMWI GCNNNNNNNGC 1 cut(s) 49
BtrI CACGTC 1 cut(s) 190
Csp6I GTAC 2 cut(s) 237, 325
CviAII CATG 2 cut(s) 44, 223
CviJI RGCY 2 cut(s) 186, 270
CviKI_1 RGCY 2 cut(s) 186, 270
CviQI GTAC 2 cut(s) 237, 325
DraIII CACNNNGTG 1 cut(s) 80
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
FaeI CATG 2 cut(s) 47, 226
FaiI YATR 5 cut(s) 45, 56, 92, 202, 224
FaqI GGGAC 1 cut(s) 20
FatI CATG 2 cut(s) 43, 222
FspBI CTAG 1 cut(s) 331
HapII CCGG 1 cut(s) 309
Hin1II CATG 2 cut(s) 47, 226
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HpaII CCGG 1 cut(s) 309
Hpy166II GTNNAC 2 cut(s) 193, 327
Hpy8I GTNNAC 2 cut(s) 193, 327
HpyAV CCTTC 2 cut(s) 117, 158
HpyCH4III ACNGT 2 cut(s) 180, 319
HpyCH4IV ACGT 1 cut(s) 189
HpyCH4V TGCA 1 cut(s) 301
HpyF10VI GCNNNNNNNGC 1 cut(s) 49
HpySE526I ACGT 1 cut(s) 189
Hsp92II CATG 2 cut(s) 47, 226
KpnI GGTACC 1 cut(s) 240
LguI GCTCTTC 1 cut(s) 42
LpnPI CCDG 2 cut(s) 165, 322
MaeI CTAG 1 cut(s) 331
MaeII ACGT 1 cut(s) 189
MaeIII GTNAC 2 cut(s) 111, 174
MboII GAAGA 2 cut(s) 59, 151
MluCI AATT 3 cut(s) 12, 17, 117
MmeI TCCRAC 1 cut(s) 50
MnlI CCTC 3 cut(s) 260, 270, 302
MseI TTAA 3 cut(s) 11, 182, 281
MspI CCGG 1 cut(s) 309
MwoI GCNNNNNNNGC 1 cut(s) 49
NlaIII CATG 2 cut(s) 47, 226
NlaIV GGNNCC 1 cut(s) 238
NmuCI GTSAC 2 cut(s) 111, 174
PciSI GCTCTTC 1 cut(s) 42
PspN4I GGNNCC 1 cut(s) 238
RsaI GTAC 2 cut(s) 238, 326
RsaNI GTAC 2 cut(s) 237, 325
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 3 cut(s) 11, 182, 281
SetI ASST 3 cut(s) 192, 281, 332
Sse9I AATT 3 cut(s) 12, 17, 117
SspMI CTAG 1 cut(s) 331
TaaI ACNGT 2 cut(s) 180, 319
TaiI ACGT 1 cut(s) 192
TasI AATT 3 cut(s) 12, 17, 117
Tru1I TTAA 3 cut(s) 11, 182, 281
Tru9I TTAA 3 cut(s) 11, 182, 281
TseFI GTSAC 2 cut(s) 111, 174
Tsp45I GTSAC 2 cut(s) 111, 174
TspDTI ATGAA 1 cut(s) 60
XspI CTAG 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.