MD04G1173200.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0017325
Physical Location & Seq
Forward (+)
26473004 .. 26474976
1973 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1173200.v1.1.491

Sequence Viewer

Length: 1698 bp
ATGGTCATAACATCTGATACGAACGTCGTCGTTTCGGAACTCTTCAGATACATAATCGAATCCCAATCAGCTGTCGAAAGCTCTGAGCTTTCGGAATGGAAGATGCTGAGTGTGAACCTCGCCGTCTCCCTCACGCTCTCCAAGCTTCTGCAACTTCCACATTTCTCTTCCATGGCGCAAGTCGAATCGGCCCAAGCTTTCCTCACGAAGGCAGGTCTCTTCTTCTCTCACCAACCCATCGTTGGAAAGCTCGTTGCTTTCGCGTCGCTGTCGCCGCTGGGATGCCTGGCGCACGCCCATGCCCTGTTCGAAGAGACCGCCATGGACGACCCCTTCGTCTGCAACACCATGATCAGAGCTTACAGCAACAGCGTCTTCCCCGTCAGAGCAATACAAATTTACAACCGTATGCAGGAAATGGGTGTTGGGTCTGATCACTTCACCTTCAATTTCGCGCTCAAGGCTTGCGCCAGAGTGGTGAAGCAGATGGAAGATGGTGTGAAATCGCACGGATTTGGGGTGGATAGAAAGGGAGGGGAAATTCATTGCCGAGTTTTGAAGTTGGGGTTCGATCGTGATCTGTATGTGCAGAATTCGTTGCTTTTTGTGTACTGTCAGTGTGGGTTTGTGAGACTTGCCCGGTGCGTGTTCGACGAAATGACTGAGAGAAGTGTTGCTTCTTGGAATATTATGATATCGGCTTATGACCGGATTAACGATTTTGAAACCGCGGATTCTTTGTTTCGATCGATGCCTGAGAAGAATGTGGTTTCCTGGAATACTTTGTTGGCAAGGCATGTTAGGTTGAGCAACATTGAGGCTGCGGAAATGGTGTTCCGAGAGATGACGGGGAGGGATTCAGTTTCTTGGAATTCTATGATTGCTGGGTATGTTCAGGTTAGAGATTATGATGGAGCATTGAAGCTCTTCCGTGAAATGCAAGTTGCCGAGGTGGAAGCTACTGAAGTAACGCTCGTATCGATCTTGGGTGCTTGTGCTGAAACCGGCACGTTGGAGATTGGAAGGAAGATCCACGAGTCCCTGAAGCACCATAAGATTGGAGGGTATTTGGGGGTTGCCCTTGTAGATATGTATTCGAAATGCGGAAAAGTGAATTCAGCCTGGGAAGTGTTCCATGAGCTGAAAATGAAACCTGTCGGCTGCTGGAACGCCATGATTGTGGGTCTGGCCGTACATGGTTACTGCAAGGAGGCTCTGAAATTGTTCAAAACTATGGAAACGCAGCATGGCGAAGTCAGGCCTAATCGGATTACATTCATCGGCGTTCTCATTGCGTGCAGCCACAAAGGTTTGGTGGAAGAAGGACGCCGGTATTTCAATCACATGATTCAAGAATACAATATCATGCCGGACAATAAGCATTACGGTTGCATGGTTGATCTTCTCAGCAGAACGGGATTGCTTGAAGAAGCCTACGAGATGATCAAAACTGTGCCTTGCGGCTCAAGCTCCTTGCTGTGGAGGACCTTGTTGGGTGCTTGTAGGGTACATGGAAACGTAGAATTGGCGGAACAAAGCTTTCGGCAGCTTGCGAAATTGGAGCCTCTAAGGGATGCAGATTATGTTTTGTTGTCAAACGTCTATGCAGAAGCAGAGAGATGGGACGACGTTGAGCGTTTGAGGAACGAGATGATTTGTAAGGGAGTCTCCAAAACGCTCGGCTTCAGCCATGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

566

Amino Acids

63.63

Weight (kDa)

6.36

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 112 - 158 1e-06 PPR repeat family
PPR_2 PF13041 286 - 333 6.4e-10 PPR repeat family
PPR PF01535 288 - 314 1.1e-07 PPR repeat
E_motif PF20431 504 - 565 1.8e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g10030
malus_domestica MD04G1173200.v1.1 MD12G1186600.v1.1
prunus_persica Prupe.6G292100_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0460711
rosa_laevigata RLG00000024986
rosa_multiflora Rmu_sc0007459.1_g000001 Rmu_sc0011069.1_g000007
rosa_roxburghii Rroxscaffold_6G00419280
rosa_rugosa Rorug03G0045400
rosa_samantha Rh3AG102900 Rh3DG108100
rosa_wichuraiana Rw3G008760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 335
Acc36I ACCTGC 1 cut(s) 203
AccII CGCG 3 cut(s) 263, 455, 731
AciI CCGC 8 cut(s) 275, 318, 729, 731, 824, 1104, 1461, 1529
AclWI GGATC 1 cut(s) 1024
AcoI YGGCCR 1 cut(s) 1188
AcsI RAATTY 5 cut(s) 396, 540, 592, 871, 1114
AcuI CTGAAG 4 cut(s) 28, 984, 1064, 1669
AcyI GRCGYC 1 cut(s) 1327
AfaI GTAC 3 cut(s) 611, 1194, 1509
AfiI CCNNNNNNNGG 4 cut(s) 208, 242, 412, 1479
AgsI TTSAA 8 cut(s) 448, 559, 725, 922, 1228, 1339, 1352, 1427
AjnI CCWGG 3 cut(s) 285, 773, 1121
AjuI GAANNNNNNNTTGG 4 cut(s) 408, 440, 770, 802
AloI GAACNNNNNNTCC 2 cut(s) 818, 850
Alw26I GTCTC 5 cut(s) 130, 221, 308, 625, 1672
AlwI GGATC 1 cut(s) 1024
AoxI GGCC 3 cut(s) 189, 1188, 1259
ApeKI GCWGC 5 cut(s) 821, 1161, 1243, 1299, 1546
ApoI RAATTY 5 cut(s) 396, 540, 592, 871, 1114
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
Asp700I GAANNNNTTC 2 cut(s) 926, 1223
AspLEI GCGC 4 cut(s) 178, 292, 457, 470
AspS9I GGNCC 2 cut(s) 190, 1485
AsuC2I CCSGG 1 cut(s) 640
AsuHPI GGTGA 3 cut(s) 221, 433, 490
AsuII TTCGAA 2 cut(s) 309, 1097
AvaII GGWCC 1 cut(s) 1485
BaeI ACNNNNGTAYC 4 cut(s) 9, 42, 960, 993
BauI CACGAG 1 cut(s) 1034
BbsI GAAGAC 1 cut(s) 367
BbvI GCAGC 5 cut(s) 808, 1148, 1255, 1311, 1558
BccI CCATC 5 cut(s) 245, 481, 488, 905, 1614
BceAI ACGGC 2 cut(s) 107, 1175
BciT130I CCWGG 3 cut(s) 287, 775, 1123
BclI TGATCA 3 cut(s) 351, 433, 1443
BcnI CCSGG 1 cut(s) 640
BcoDI GTCTC 5 cut(s) 130, 221, 308, 625, 1672
BfuAI ACCTGC 1 cut(s) 203
BisI GCNGC 7 cut(s) 275, 822, 1162, 1244, 1300, 1462, 1547
BlsI GCNGC 7 cut(s) 276, 823, 1163, 1245, 1301, 1463, 1548
Bme1390I CCNGG 4 cut(s) 287, 640, 775, 1123
Bme18I GGWCC 1 cut(s) 1485
BmgT120I GGNCC 2 cut(s) 190, 1485
BmiI GGNNCC 1 cut(s) 1563
BmrFI CCNGG 4 cut(s) 287, 640, 775, 1123
BmsI GCATC 4 cut(s) 93, 272, 741, 1564
BpiI GAAGAC 1 cut(s) 367
Bpu14I TTCGAA 2 cut(s) 309, 1097
BpuEI CTTGAG 2 cut(s) 443, 1450
BpuMI CCSGG 1 cut(s) 640
Bsa29I ATCGAT 2 cut(s) 749, 980
BsaBI GATNNNNATC 1 cut(s) 576
BsaHI GRCGYC 1 cut(s) 1327
BsaI GGTCTC 2 cut(s) 221, 308
BsaJI CCNNGG 5 cut(s) 171, 321, 729, 948, 1122
BsaWI WCCGGW 1 cut(s) 708
Bsc4I CCNNNNNNNGG 4 cut(s) 208, 242, 412, 1479
Bse118I RCCGGY 2 cut(s) 1004, 1329
Bse3DI GCAATG 2 cut(s) 544, 1290
Bse8I GATNNNNATC 1 cut(s) 576
BseBI CCWGG 3 cut(s) 287, 775, 1123
BseCI ATCGAT 2 cut(s) 749, 980
BseDI CCNNGG 5 cut(s) 171, 321, 729, 948, 1122
BseGI GGATG 2 cut(s) 287, 1579
BseJI GATNNNNATC 1 cut(s) 576
BseLI CCNNNNNNNGG 4 cut(s) 208, 242, 412, 1479
BseMI GCAATG 2 cut(s) 544, 1290
BseMII CTCAG 5 cut(s) 75, 98, 654, 747, 1420
BseXI GCAGC 5 cut(s) 808, 1148, 1255, 1311, 1558
BseYI CCCAGC 2 cut(s) 277, 884
BsgI GTGCAG 2 cut(s) 608, 1318
Bsh1236I CGCG 3 cut(s) 263, 455, 731
Bsh1285I CGRYCG 2 cut(s) 574, 749
BshFI GGCC 3 cut(s) 191, 1190, 1261
BshVI ATCGAT 2 cut(s) 749, 980
BsiEI CGRYCG 2 cut(s) 574, 749
BsiSI CCGG 5 cut(s) 640, 709, 1005, 1330, 1370
BslFI GGGAC 2 cut(s) 1024, 1637
BslI CCNNNNNNNGG 4 cut(s) 208, 242, 412, 1479
BsmAI GTCTC 5 cut(s) 130, 221, 308, 625, 1672
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 2 cut(s) 1024, 1637
BsnI GGCC 3 cut(s) 191, 1190, 1261
Bso31I GGTCTC 2 cut(s) 221, 308
Bsp119I TTCGAA 2 cut(s) 309, 1097
Bsp143I GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
Bsp19I CCATGG 2 cut(s) 171, 321
BspACI CCGC 8 cut(s) 275, 318, 729, 731, 824, 1104, 1461, 1529
BspANI GGCC 3 cut(s) 191, 1190, 1261
BspCNI CTCAG 5 cut(s) 76, 99, 655, 748, 1419
BspDI ATCGAT 2 cut(s) 749, 980
BspFNI CGCG 3 cut(s) 263, 455, 731
BspLI GGNNCC 1 cut(s) 1563
BspMI ACCTGC 1 cut(s) 203
BspPI GGATC 1 cut(s) 1024
BspQI GCTCTTC 1 cut(s) 932
BspT104I TTCGAA 2 cut(s) 309, 1097
BspTNI GGTCTC 2 cut(s) 221, 308
BsrDI GCAATG 2 cut(s) 544, 1290
BsrFI RCCGGY 2 cut(s) 1004, 1329
BssAI RCCGGY 2 cut(s) 1004, 1329
BssECI CCNNGG 5 cut(s) 171, 321, 729, 948, 1122
BssMI GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
BssNI GRCGYC 1 cut(s) 1327
BssSI CACGAG 1 cut(s) 1034
BssT1I CCWWGG 2 cut(s) 171, 321
Bst2BI CACGAG 1 cut(s) 1034
Bst2UI CCWGG 3 cut(s) 287, 775, 1123
Bst4CI ACNGT 4 cut(s) 407, 614, 1388, 1453
Bst6I CTCTTC 5 cut(s) 47, 172, 224, 306, 932
BstACI GRCGYC 1 cut(s) 1327
BstBI TTCGAA 2 cut(s) 309, 1097
BstC8I GCNNGC 4 cut(s) 294, 466, 1297, 1551
BstDEI CTNAG 6 cut(s) 84, 107, 663, 756, 1406, 1568
BstDSI CCRYGG 3 cut(s) 171, 321, 729
BstENI CCTNNNNNAGG 1 cut(s) 206
BstF5I GGATG 2 cut(s) 287, 1579
BstFNI CGCG 3 cut(s) 263, 455, 731
BstHHI GCGC 4 cut(s) 178, 292, 457, 470
BstKTI GATC 9 cut(s) 354, 436, 574, 580, 749, 984, 1032, 1402, 1446
BstMAI GTCTC 5 cut(s) 130, 221, 308, 625, 1672
BstMBI GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
BstMCI CGRYCG 2 cut(s) 574, 749
BstMWI GCNNNNNNNGC 4 cut(s) 142, 274, 461, 1467
BstNI CCWGG 3 cut(s) 287, 775, 1123
BstNSI RCATGY 1 cut(s) 800
BstSCI CCNGG 4 cut(s) 285, 638, 773, 1121
BstUI CGCG 3 cut(s) 263, 455, 731
BstV1I GCAGC 5 cut(s) 808, 1148, 1255, 1311, 1558
BstV2I GAAGAC 1 cut(s) 367
BstX2I RGATCY 1 cut(s) 1029
BstXI CCANNNNNNTGG 2 cut(s) 1058, 1180
BstYI RGATCY 1 cut(s) 1029
Bsu15I ATCGAT 2 cut(s) 749, 980
BsuRI GGCC 3 cut(s) 191, 1190, 1261
BsuTUI ATCGAT 2 cut(s) 749, 980
BtgI CCRYGG 3 cut(s) 171, 321, 729
BtsCI GGATG 2 cut(s) 287, 1579
BtsIMutI CAGTG 1 cut(s) 623
BveI ACCTGC 1 cut(s) 203
Cac8I GCNNGC 4 cut(s) 294, 466, 1297, 1551
CfoI GCGC 4 cut(s) 178, 292, 457, 470
Cfr10I RCCGGY 2 cut(s) 1004, 1329
Cfr13I GGNCC 2 cut(s) 190, 1485
Cfr42I CCGCGG 1 cut(s) 732
ClaI ATCGAT 2 cut(s) 749, 980
CseI GACGC 3 cut(s) 252, 361, 1335
Csp6I GTAC 3 cut(s) 610, 1193, 1508
CviQI GTAC 3 cut(s) 610, 1193, 1508
DdeI CTNAG 6 cut(s) 84, 107, 663, 756, 1406, 1568
DpnI GATC 9 cut(s) 353, 435, 573, 579, 748, 983, 1031, 1401, 1445
DpnII GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
DrdI GACNNNNNNGTC 1 cut(s) 335
DseDI GACNNNNNNGTC 1 cut(s) 335
EaeI YGGCCR 1 cut(s) 1188
Eam1104I CTCTTC 5 cut(s) 47, 172, 224, 306, 932
EarI CTCTTC 5 cut(s) 47, 172, 224, 306, 932
EciI GGCGGA 1 cut(s) 1544
Eco130I CCWWGG 2 cut(s) 171, 321
Eco147I AGGCCT 1 cut(s) 1261
Eco31I GGTCTC 2 cut(s) 221, 308
Eco32I GATATC 1 cut(s) 696
Eco47I GGWCC 1 cut(s) 1485
Eco57I CTGAAG 4 cut(s) 28, 984, 1064, 1669
EcoNI CCTNNNNNAGG 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 1485
EcoRI GAATTC 3 cut(s) 592, 871, 1114
EcoRII CCWGG 3 cut(s) 285, 773, 1121
EcoRV GATATC 1 cut(s) 696
EcoT14I CCWWGG 2 cut(s) 171, 321
ErhI CCWWGG 2 cut(s) 171, 321
Esp3I CGTCTC 1 cut(s) 130
FalI AAGNNNNNCTT 2 cut(s) 661, 693
FaqI GGGAC 2 cut(s) 1024, 1637
FbaI TGATCA 3 cut(s) 351, 433, 1443
Fnu4HI GCNGC 7 cut(s) 275, 822, 1162, 1244, 1300, 1462, 1547
FokI GGATG 2 cut(s) 294, 1586
Fsp4HI GCNGC 7 cut(s) 275, 822, 1162, 1244, 1300, 1462, 1547
GlaI GCGC 4 cut(s) 177, 291, 456, 469
GluI GCNGC 7 cut(s) 275, 822, 1162, 1244, 1300, 1462, 1547
GsaI CCCAGC 2 cut(s) 281, 888
HaeIII GGCC 3 cut(s) 191, 1190, 1261
HapII CCGG 5 cut(s) 640, 709, 1005, 1330, 1370
HgaI GACGC 3 cut(s) 252, 361, 1335
HhaI GCGC 4 cut(s) 178, 292, 457, 470
Hin1I GRCGYC 1 cut(s) 1327
Hin6I GCGC 4 cut(s) 176, 290, 455, 468
HinP1I GCGC 4 cut(s) 176, 290, 455, 468
HindIII AAGCTT 3 cut(s) 143, 195, 1537
HinfI GANTC 7 cut(s) 59, 185, 734, 857, 1037, 1348, 1665
HpaII CCGG 5 cut(s) 640, 709, 1005, 1330, 1370
HphI GGTGA 3 cut(s) 221, 433, 490
Hpy166II GTNNAC 2 cut(s) 115, 610
Hpy188III TCNNGA 3 cut(s) 205, 575, 1352
Hpy8I GTNNAC 2 cut(s) 115, 610
Hpy99I CGWCG 5 cut(s) 29, 32, 268, 656, 1631
HpyAV CCTTC 5 cut(s) 202, 343, 454, 1017, 1316
HpyCH4III ACNGT 4 cut(s) 407, 614, 1388, 1453
HpyCH4IV ACGT 5 cut(s) 24, 1010, 1518, 1599, 1629
HpyF10VI GCNNNNNNNGC 4 cut(s) 142, 274, 461, 1467
HpyF3I CTNAG 6 cut(s) 84, 107, 663, 756, 1406, 1568
HpySE526I ACGT 5 cut(s) 24, 1010, 1518, 1599, 1629
Hsp92I GRCGYC 1 cut(s) 1327
HspAI GCGC 4 cut(s) 176, 290, 455, 468
Ksp22I TGATCA 3 cut(s) 351, 433, 1443
KspI CCGCGG 1 cut(s) 732
Kzo9I GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
LguI GCTCTTC 1 cut(s) 932
LmnI GCTCC 3 cut(s) 914, 1475, 1561
Lsp1109I GCAGC 5 cut(s) 808, 1148, 1255, 1311, 1558
LweI GCATC 4 cut(s) 93, 272, 741, 1564
MaeII ACGT 5 cut(s) 24, 1010, 1518, 1599, 1629
MaeIII GTNAC 2 cut(s) 967, 1199
MalI GATC 9 cut(s) 353, 435, 573, 579, 748, 983, 1031, 1401, 1445
MboI GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
MflI RGATCY 1 cut(s) 1029
MluCI AATT 9 cut(s) 396, 448, 540, 592, 871, 1114, 1220, 1523, 1556
MlyI GAGTC 2 cut(s) 1046, 1674
MmeI TCCRAC 2 cut(s) 223, 993
MroXI GAANNNNTTC 2 cut(s) 926, 1223
MseI TTAA 1 cut(s) 714
MslI CAYNNNNRTG 2 cut(s) 297, 1178
MspA1I CMGCKG 3 cut(s) 71, 277, 731
MspI CCGG 5 cut(s) 640, 709, 1005, 1330, 1370
MspR9I CCNGG 4 cut(s) 287, 640, 775, 1123
MvaI CCWGG 3 cut(s) 287, 775, 1123
MvnI CGCG 3 cut(s) 263, 455, 731
MwoI GCNNNNNNNGC 4 cut(s) 142, 274, 461, 1467
NciI CCSGG 1 cut(s) 640
NcoI CCATGG 2 cut(s) 171, 321
NdeII GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
NlaIV GGNNCC 1 cut(s) 1563
NmeAIII GCCGAG 3 cut(s) 575, 973, 1659
NspI RCATGY 1 cut(s) 800
NspV TTCGAA 2 cut(s) 309, 1097
PceI AGGCCT 1 cut(s) 1261
PciSI GCTCTTC 1 cut(s) 932
PcsI WCGNNNNNNNCGW 2 cut(s) 333, 977
PdmI GAANNNNTTC 2 cut(s) 926, 1223
PfeI GAWTC 5 cut(s) 59, 185, 734, 857, 1348
PfoI TCCNGGA 1 cut(s) 773
PkrI GCNGC 7 cut(s) 276, 823, 1163, 1245, 1301, 1463, 1548
Ple19I CGATCG 2 cut(s) 574, 749
PleI GAGTC 2 cut(s) 1045, 1673
PpsI GAGTC 2 cut(s) 1045, 1673
PpuMI RGGWCCY 1 cut(s) 1485
Psp5II RGGWCCY 1 cut(s) 1485
Psp6I CCWGG 3 cut(s) 285, 773, 1121
PspFI CCCAGC 2 cut(s) 277, 884
PspGI CCWGG 3 cut(s) 285, 773, 1121
PspN4I GGNNCC 1 cut(s) 1563
PspPI GGNCC 2 cut(s) 190, 1485
PspPPI RGGWCCY 1 cut(s) 1485
PsuI RGATCY 1 cut(s) 1029
PvuI CGATCG 2 cut(s) 574, 749
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 3 cut(s) 611, 1194, 1509
RsaNI GTAC 3 cut(s) 610, 1193, 1508
RseI CAYNNNNRTG 2 cut(s) 297, 1178
SacII CCGCGG 1 cut(s) 732
SapI GCTCTTC 1 cut(s) 932
SaqAI TTAA 1 cut(s) 714
SatI GCNGC 7 cut(s) 275, 822, 1162, 1244, 1300, 1462, 1547
Sau3AI GATC 9 cut(s) 351, 433, 571, 577, 746, 981, 1029, 1399, 1443
Sau96I GGNCC 2 cut(s) 190, 1485
SchI GAGTC 2 cut(s) 1046, 1674
ScrFI CCNGG 4 cut(s) 287, 640, 775, 1123
SfaNI GCATC 4 cut(s) 93, 272, 741, 1564
Sfr303I CCGCGG 1 cut(s) 732
SfuI TTCGAA 2 cut(s) 309, 1097
SgrBI CCGCGG 1 cut(s) 732
SinI GGWCC 1 cut(s) 1485
SmiMI CAYNNNNRTG 2 cut(s) 297, 1178
SmlI CTYRAG 2 cut(s) 458, 1465
SmoI CTYRAG 2 cut(s) 458, 1465
Sse9I AATT 9 cut(s) 396, 448, 540, 592, 871, 1114, 1220, 1523, 1556
SseBI AGGCCT 1 cut(s) 1261
SsiI CCGC 8 cut(s) 275, 318, 729, 731, 824, 1104, 1461, 1529
SspI AATATT 1 cut(s) 688
StuI AGGCCT 1 cut(s) 1261
StyD4I CCNGG 4 cut(s) 285, 638, 773, 1121
StyI CCWWGG 2 cut(s) 171, 321
TaaI ACNGT 4 cut(s) 407, 614, 1388, 1453
TaiI ACGT 5 cut(s) 27, 1013, 1521, 1602, 1632
TasI AATT 9 cut(s) 396, 448, 540, 592, 871, 1114, 1220, 1523, 1556
TatI WGTACW 1 cut(s) 609
TauI GCSGC 2 cut(s) 277, 1464
TfiI GAWTC 5 cut(s) 59, 185, 734, 857, 1348
Tru1I TTAA 1 cut(s) 714
Tru9I TTAA 1 cut(s) 714
TscAI CASTG 1 cut(s) 623
TseI GCWGC 5 cut(s) 821, 1161, 1243, 1299, 1546
TspDTI ATGAA 3 cut(s) 533, 1163, 1267
TspGWI ACGGA 2 cut(s) 525, 920
TspRI CASTG 1 cut(s) 623
VpaK11BI GGWCC 1 cut(s) 1485
XagI CCTNNNNNAGG 1 cut(s) 206
XapI RAATTY 5 cut(s) 396, 540, 592, 871, 1114
XceI RCATGY 1 cut(s) 800
XcmI CCANNNNNNNNNTGG 1 cut(s) 239
XmnI GAANNNNTTC 2 cut(s) 926, 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.