Rh3AG102900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0017325
Physical Location & Seq
Reverse (-)
8541838 .. 8544101
2264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG102900.1

Sequence Viewer

Length: 1608 bp
ATGAACCGCACCATTCCTCACATACTTTCAGACCTTCGTCGTCGTCTTCATCCTCTCTCCTCCATCAAACAAGTCGAAGCAGCCCAAGCTTTCCTCACCAAAACAGGCCTCTTCTTCACCCAGACACCTCTCCTCGCAAAGCTCATAGCTTTCGCATCTCTTTCACCACTGGGCTGCCTCTCCCACGCTCAATCGCTGTTCCAAGAAACCGCCATGGACGACCCTTTCACCTGTAGCACCATGATCAGAGCTTACACCAACAGCGATTTCCCCATCAAAGGGATTCATATCTATAATCATATGATCGTGACCCAAGTTGGGTGTGATCATTTCACTTACAATTTCGCACTCAAGGCCTGTGCGAGAGTCATGAAAGGTATGAAGAAAAATGATGCGAAGGTTTTTGGCTTGGGGATTGATTTGAAGGGAGGTGAGATTCATGGCCGGGTTTTGAAGCTGGGGTTTGATTCCGATTTGTATGTTCAGAATTCGTTGCTGTTTGTGTATGCTCAGACTGGGTCCGTGGGACTTGCACGCCAGGTGTTCGATGAAATGTCTGAGAGAAGCGTTTCGTCGTGGAACATCATGATATCAGCTTATGATCAGATAACGGATTTCGAATCGGCGGACTGGCTGTTCCAGTTGATGCCTCAGAAGAATGTGGTGTCTTGGAATACGTTATTAGGGCGGCATGTTAGATTGGGCAGCGTTGAGGCTGCGAAGATGGTGTTTGAAGAGATGGTGGAGAGGGATGCGGTTTCGTGGAATTCGATGATTGCTGGTTATGTTCAGGTTAGAGATTATGGTGGAGCATTGGAGCTGTTCCGGGAAATGCAAGTTACTGAAGTGGAAGCTACGGAAGTGACGCTAATATCGGTTTTGGGTGCTTGTGCTGAAACCGGGGAGTTGGAGATTGGAAGGAAGATTCATGAGTCGTTGAAAGGAAAGCAGCATAAGATTGAAGGGTACTTGGGGACTGCCCTTGTGGATATGTATTCTAAATGTGGAAAGTTGAGTTCAGCTTGGGAGGTGTTTAGTGGGATGAAAATGAGACCGGTTGGTTGCTGGAATGCAATGATTATGGGTTTCGCTGTCCATGGTCACTGCGAGGAAGCTTTGGAGTTGTTTGCAGATATGGAAATGCAGGTTGGTGAAGTGAAGCCGAATCGGATCACCTTTGTTGGCGTGCTCATTGCTTGTAGTCACAAGGGTTTGGTGGAAGAAGGGCGCCGGTATTTCAGTTACATGATTCAAAAATACAAAATCTTGCCTGATACCAAGCATTATGGTTGCATGGTTGATCTTCTTAGCAGGTGGGGATTGTTAGATGAAGCCTACCAGATGATCAAAGCTGTGCCTTCCCTATCAAGCTCTTTGTTGTGGAGAACCTTGTTGGGTGCTTGTAAGGTACATGGAAACGTTGAATTGGCTGAGCAATGCTTTGAGCAGCTAGCCAAATTGGAACCTCTTAAGGATGCAGATTATGTTTTGTTGTCAAACATCTACGCCGAAGCCGAGAAATGGCACGATGTCGAGCGGTTGAGGAATGAGATGGTTTGTAAGGGTGTTCCCAAAAGCCTCGGCTTCAGCCATGTAGAGATGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

535

Amino Acids

60.13

Weight (kDa)

6.4

Isoelectric Point (pI)

37.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 219 - 250 7.4e-06 PPR repeat family
PPR_2 PF13041 251 - 298 2.4e-08 PPR repeat family
PPR PF01535 253 - 279 1e-06 PPR repeat
PPR_2 PF13041 354 - 400 2.7e-06 PPR repeat family
PPR PF01535 355 - 380 2.2e-06 PPR repeat
E_motif PF20431 471 - 533 4.7e-17 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g10030
malus_domestica MD04G1173200.v1.1 MD12G1186600.v1.1
prunus_persica Prupe.6G292100_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0460711
rosa_laevigata RLG00000024986
rosa_multiflora Rmu_sc0007459.1_g000001 Rmu_sc0011069.1_g000007
rosa_roxburghii Rroxscaffold_6G00419280
rosa_rugosa Rorug03G0045400
rosa_samantha Rh3AG102900 Rh3DG108100
rosa_wichuraiana Rw3G008760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1302
Acc36I ACCTGC 2 cut(s) 1135, 1302
AccB1I GGYRCC 1 cut(s) 1227
AccBSI CCGCTC 1 cut(s) 1537
AciI CCGC 6 cut(s) 7, 210, 626, 688, 755, 1537
AclI AACGTT 1 cut(s) 1419
AclWI GGATC 1 cut(s) 1178
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 2 cut(s) 487, 766
AcuI CTGAAG 2 cut(s) 864, 1570
AcyI GRCGYC 1 cut(s) 1228
AfaI GTAC 2 cut(s) 968, 1410
AfiI CCNNNNNNNGG 4 cut(s) 278, 279, 318, 1521
AflII CTTAAG 1 cut(s) 1469
AgeI ACCGGT 1 cut(s) 1054
AgsI TTSAA 7 cut(s) 424, 454, 734, 940, 962, 1253, 1424
AjnI CCWGG 1 cut(s) 537
AjuI GAANNNNNNNTTGG 4 cut(s) 251, 283, 1131, 1163
AloI GAACNNNNNNTCC 2 cut(s) 620, 652
Alw21I GWGCWC 1 cut(s) 1191
Alw26I GTCTC 1 cut(s) 1045
AlwI GGATC 1 cut(s) 1178
AoxI GGCC 3 cut(s) 106, 354, 442
ApeKI GCWGC 6 cut(s) 80, 174, 705, 716, 949, 1447
ApoI RAATTY 2 cut(s) 487, 766
AsiGI ACCGGT 1 cut(s) 1054
Asp700I GAANNNNTTC 1 cut(s) 568
AspLEI GCGC 1 cut(s) 1230
AspS9I GGNCC 1 cut(s) 519
AsuC2I CCSGG 3 cut(s) 446, 827, 901
AsuHPI GGTGA 7 cut(s) 88, 109, 156, 220, 443, 1163, 1165
AsuII TTCGAA 1 cut(s) 618
AsuNHI GCTAGC 1 cut(s) 1450
AvaII GGWCC 1 cut(s) 519
BanI GGYRCC 1 cut(s) 1227
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 1191
BbvI GCAGC 6 cut(s) 92, 161, 703, 717, 961, 1459
BccI CCATC 5 cut(s) 71, 281, 718, 733, 1546
BciT130I CCWGG 1 cut(s) 539
BclI TGATCA 4 cut(s) 243, 325, 601, 1344
BcnI CCSGG 3 cut(s) 446, 827, 901
BcoDI GTCTC 1 cut(s) 1045
BfaI CTAG 1 cut(s) 1451
BfmI CTRYAG 1 cut(s) 232
BfoI RGCGCY 1 cut(s) 1231
BfrI CTTAAG 1 cut(s) 1469
BfuAI ACCTGC 2 cut(s) 1135, 1302
BisI GCNGC 7 cut(s) 81, 175, 689, 706, 717, 950, 1448
BlpI GCTNAGC 1 cut(s) 1431
BlsI GCNGC 7 cut(s) 82, 176, 690, 707, 718, 951, 1449
Bme1390I CCNGG 4 cut(s) 446, 539, 827, 901
Bme18I GGWCC 1 cut(s) 519
BmgT120I GGNCC 1 cut(s) 519
BmiI GGNNCC 3 cut(s) 520, 1229, 1464
BmrFI CCNGG 4 cut(s) 446, 539, 827, 901
BmrI ACTGGG 2 cut(s) 179, 525
BmsI GCATC 5 cut(s) 164, 382, 636, 742, 1465
BmtI GCTAGC 1 cut(s) 1454
BmuI ACTGGG 2 cut(s) 179, 525
BoxI GACNNNNGTC 1 cut(s) 36
BpiI GAAGAC 1 cut(s) 38
Bpu1102I GCTNAGC 1 cut(s) 1431
Bpu14I TTCGAA 1 cut(s) 618
BpuEI CTTGAG 1 cut(s) 335
BpuMI CCSGG 3 cut(s) 446, 827, 901
BsaBI GATNNNNATC 1 cut(s) 287
BsaHI GRCGYC 1 cut(s) 1228
BsaI GGTCTC 1 cut(s) 1045
BsaJI CCNNGG 5 cut(s) 213, 522, 900, 1096, 1579
BsaWI WCCGGW 1 cut(s) 1054
Bsc4I CCNNNNNNNGG 4 cut(s) 278, 279, 318, 1521
Bse118I RCCGGY 2 cut(s) 1054, 1230
Bse1I ACTGG 4 cut(s) 174, 520, 635, 640
Bse3DI GCAATG 3 cut(s) 1080, 1191, 1442
Bse8I GATNNNNATC 1 cut(s) 287
BseBI CCWGG 1 cut(s) 539
BseDI CCNNGG 5 cut(s) 213, 522, 900, 1096, 1579
BseGI GGATG 4 cut(s) 49, 757, 1047, 1480
BseJI GATNNNNATC 1 cut(s) 287
BseLI CCNNNNNNNGG 4 cut(s) 278, 279, 318, 1521
BseMI GCAATG 3 cut(s) 1080, 1191, 1442
BseMII CTCAG 4 cut(s) 524, 549, 665, 1422
BseNI ACTGG 4 cut(s) 174, 520, 635, 640
BseRI GAGGAG 2 cut(s) 49, 122
BseXI GCAGC 6 cut(s) 92, 161, 703, 717, 961, 1459
BseYI CCCAGC 1 cut(s) 457
BshFI GGCC 3 cut(s) 108, 356, 444
BshNI GGYRCC 1 cut(s) 1227
BshTI ACCGGT 1 cut(s) 1054
BsiHKAI GWGCWC 1 cut(s) 1191
BsiSI CCGG 5 cut(s) 445, 826, 900, 1055, 1231
BslFI GGGAC 2 cut(s) 540, 988
BslI CCNNNNNNNGG 4 cut(s) 278, 279, 318, 1521
BsmAI GTCTC 1 cut(s) 1045
BsmFI GGGAC 2 cut(s) 540, 988
BsmI GAATGC 1 cut(s) 1075
BsnI GGCC 3 cut(s) 108, 356, 444
Bso31I GGTCTC 1 cut(s) 1045
Bsp119I TTCGAA 1 cut(s) 618
Bsp1286I GDGCHC 1 cut(s) 1191
Bsp143I GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
Bsp1720I GCTNAGC 1 cut(s) 1431
Bsp19I CCATGG 2 cut(s) 213, 1096
BspACI CCGC 6 cut(s) 7, 210, 626, 688, 755, 1537
BspANI GGCC 3 cut(s) 108, 356, 444
BspCNI CTCAG 4 cut(s) 523, 550, 664, 1423
BspHI TCATGA 3 cut(s) 369, 585, 928
BspLI GGNNCC 3 cut(s) 520, 1229, 1464
BspMI ACCTGC 2 cut(s) 1135, 1302
BspOI GCTAGC 1 cut(s) 1454
BspPI GGATC 1 cut(s) 1178
BspT104I TTCGAA 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 1227
BspTI CTTAAG 1 cut(s) 1469
BspTNI GGTCTC 1 cut(s) 1045
BsrBI CCGCTC 1 cut(s) 1537
BsrDI GCAATG 3 cut(s) 1080, 1191, 1442
BsrFI RCCGGY 2 cut(s) 1054, 1230
BsrI ACTGG 4 cut(s) 174, 520, 635, 640
BssAI RCCGGY 2 cut(s) 1054, 1230
BssECI CCNNGG 5 cut(s) 213, 522, 900, 1096, 1579
BssMI GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
BssNI GRCGYC 1 cut(s) 1228
BssT1I CCWWGG 2 cut(s) 213, 1096
Bst2UI CCWGG 1 cut(s) 539
Bst6I CTCTTC 2 cut(s) 116, 729
BstACI GRCGYC 1 cut(s) 1228
BstAFI CTTAAG 1 cut(s) 1469
BstBI TTCGAA 1 cut(s) 618
BstC8I GCNNGC 3 cut(s) 535, 1187, 1452
BstDEI CTNAG 5 cut(s) 510, 558, 651, 1307, 1431
BstDSI CCRYGG 3 cut(s) 213, 522, 1096
BstF5I GGATG 4 cut(s) 49, 757, 1047, 1480
BstH2I RGCGCY 1 cut(s) 1231
BstHHI GCGC 1 cut(s) 1230
BstKTI GATC 7 cut(s) 246, 306, 328, 604, 1173, 1303, 1347
BstMAI GTCTC 1 cut(s) 1045
BstMBI GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
BstMWI GCNNNNNNNGC 2 cut(s) 86, 353
BstNI CCWGG 1 cut(s) 539
BstNSI RCATGY 1 cut(s) 695
BstPAI GACNNNNGTC 1 cut(s) 36
BstSCI CCNGG 4 cut(s) 444, 537, 825, 899
BstSFI CTRYAG 1 cut(s) 232
BstV1I GCAGC 6 cut(s) 92, 161, 703, 717, 961, 1459
BstV2I GAAGAC 1 cut(s) 38
BsuRI GGCC 3 cut(s) 108, 356, 444
BtgI CCRYGG 3 cut(s) 213, 522, 1096
BtsCI GGATG 4 cut(s) 49, 757, 1047, 1480
BtsI GCAGTG 1 cut(s) 1102
BtsIMutI CAGTG 2 cut(s) 167, 1102
BveI ACCTGC 2 cut(s) 1135, 1302
Cac8I GCNNGC 3 cut(s) 535, 1187, 1452
CciI TCATGA 3 cut(s) 369, 585, 928
CfoI GCGC 1 cut(s) 1230
Cfr10I RCCGGY 2 cut(s) 1054, 1230
Cfr13I GGNCC 1 cut(s) 519
CseI GACGC 1 cut(s) 874
Csp6I GTAC 2 cut(s) 967, 1409
CspAI ACCGGT 1 cut(s) 1054
CviQI GTAC 2 cut(s) 967, 1409
DdeI CTNAG 5 cut(s) 510, 558, 651, 1307, 1431
DinI GGCGCC 1 cut(s) 1229
DpnI GATC 7 cut(s) 245, 305, 327, 603, 1172, 1302, 1346
DpnII GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 2 cut(s) 116, 729
EarI CTCTTC 2 cut(s) 116, 729
EciI GGCGGA 1 cut(s) 641
Eco130I CCWWGG 2 cut(s) 213, 1096
Eco147I AGGCCT 2 cut(s) 108, 356
Eco31I GGTCTC 1 cut(s) 1045
Eco32I GATATC 1 cut(s) 591
Eco47I GGWCC 1 cut(s) 519
Eco57I CTGAAG 2 cut(s) 864, 1570
EcoRI GAATTC 2 cut(s) 487, 766
EcoRII CCWGG 1 cut(s) 537
EcoRV GATATC 1 cut(s) 591
EcoT14I CCWWGG 2 cut(s) 213, 1096
EgeI GGCGCC 1 cut(s) 1229
EheI GGCGCC 1 cut(s) 1229
ErhI CCWWGG 2 cut(s) 213, 1096
FaqI GGGAC 2 cut(s) 540, 988
FauNDI CATATG 1 cut(s) 300
FbaI TGATCA 4 cut(s) 243, 325, 601, 1344
Fnu4HI GCNGC 7 cut(s) 81, 175, 689, 706, 717, 950, 1448
FokI GGATG 4 cut(s) 36, 764, 1054, 1487
Fsp4HI GCNGC 7 cut(s) 81, 175, 689, 706, 717, 950, 1448
FspBI CTAG 1 cut(s) 1451
GlaI GCGC 1 cut(s) 1229
GluI GCNGC 7 cut(s) 81, 175, 689, 706, 717, 950, 1448
GsaI CCCAGC 1 cut(s) 461
HaeII RGCGCY 1 cut(s) 1231
HaeIII GGCC 3 cut(s) 108, 356, 444
HapII CCGG 5 cut(s) 445, 826, 900, 1055, 1231
HgaI GACGC 1 cut(s) 874
HhaI GCGC 1 cut(s) 1230
Hin1I GRCGYC 1 cut(s) 1228
Hin6I GCGC 1 cut(s) 1228
HinP1I GCGC 1 cut(s) 1228
HindIII AAGCTT 2 cut(s) 87, 1113
HinfI GANTC 9 cut(s) 283, 366, 436, 467, 620, 925, 932, 1165, 1249
HpaII CCGG 5 cut(s) 445, 826, 900, 1055, 1231
HphI GGTGA 7 cut(s) 88, 109, 156, 220, 443, 1163, 1165
Hpy188I TCNGA 9 cut(s) 31, 248, 472, 486, 513, 559, 606, 654, 1170
Hpy188III TCNNGA 4 cut(s) 307, 370, 586, 929
Hpy99I CGWCG 3 cut(s) 42, 45, 577
HpyAV CCTTC 7 cut(s) 44, 391, 418, 912, 956, 1217, 1368
HpyCH4IV ACGT 2 cut(s) 677, 1419
HpyCH4V TGCA 7 cut(s) 533, 835, 1073, 1130, 1144, 1293, 1478
HpyF10VI GCNNNNNNNGC 2 cut(s) 86, 353
HpyF3I CTNAG 5 cut(s) 510, 558, 651, 1307, 1431
HpySE526I ACGT 2 cut(s) 677, 1419
Hsp92I GRCGYC 1 cut(s) 1228
HspAI GCGC 1 cut(s) 1228
KasI GGCGCC 1 cut(s) 1227
Ksp22I TGATCA 4 cut(s) 243, 325, 601, 1344
Kzo9I GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
LmnI GCTCC 2 cut(s) 809, 817
Lsp1109I GCAGC 6 cut(s) 92, 161, 703, 717, 961, 1459
LweI GCATC 5 cut(s) 164, 382, 636, 742, 1465
MaeI CTAG 1 cut(s) 1451
MaeII ACGT 2 cut(s) 677, 1419
MaeIII GTNAC 6 cut(s) 307, 838, 862, 1100, 1202, 1241
MalI GATC 7 cut(s) 245, 305, 327, 603, 1172, 1302, 1346
MbiI CCGCTC 1 cut(s) 1537
MboI GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
MhlI GDGCHC 1 cut(s) 1191
MluCI AATT 5 cut(s) 340, 487, 766, 1424, 1457
Mly113I GGCGCC 1 cut(s) 1228
MlyI GAGTC 2 cut(s) 375, 941
MmeI TCCRAC 1 cut(s) 888
MroXI GAANNNNTTC 1 cut(s) 568
MseI TTAA 1 cut(s) 1470
MspCI CTTAAG 1 cut(s) 1469
MspI CCGG 5 cut(s) 445, 826, 900, 1055, 1231
MspR9I CCNGG 4 cut(s) 446, 539, 827, 901
Mva1269I GAATGC 1 cut(s) 1075
MvaI CCWGG 1 cut(s) 539
MwoI GCNNNNNNNGC 2 cut(s) 86, 353
NarI GGCGCC 1 cut(s) 1228
NciI CCSGG 3 cut(s) 446, 827, 901
NcoI CCATGG 2 cut(s) 213, 1096
NdeI CATATG 1 cut(s) 300
NdeII GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
NheI GCTAGC 1 cut(s) 1450
NlaIV GGNNCC 3 cut(s) 520, 1229, 1464
NmeAIII GCCGAG 2 cut(s) 1540, 1560
NmuCI GTSAC 4 cut(s) 307, 862, 1100, 1202
NspI RCATGY 1 cut(s) 695
NspV TTCGAA 1 cut(s) 618
PagI TCATGA 3 cut(s) 369, 585, 928
PaqCI CACCTGC 1 cut(s) 1302
PceI AGGCCT 2 cut(s) 108, 356
PcsI WCGNNNNNNNCGW 2 cut(s) 767, 1512
PctI GAATGC 1 cut(s) 1075
PdmI GAANNNNTTC 1 cut(s) 568
PfeI GAWTC 7 cut(s) 283, 436, 467, 620, 925, 1165, 1249
PflFI GACNNNGTC 1 cut(s) 517
PfoI TCCNGGA 1 cut(s) 825
PinAI ACCGGT 1 cut(s) 1054
PkrI GCNGC 7 cut(s) 82, 176, 690, 707, 718, 951, 1449
PleI GAGTC 2 cut(s) 374, 940
PluTI GGCGCC 1 cut(s) 1231
PpsI GAGTC 2 cut(s) 374, 940
PshAI GACNNNNGTC 1 cut(s) 36
Psp1406I AACGTT 1 cut(s) 1419
Psp6I CCWGG 1 cut(s) 537
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 1 cut(s) 537
PspN4I GGNNCC 3 cut(s) 520, 1229, 1464
PspPI GGNCC 1 cut(s) 519
PsyI GACNNNGTC 1 cut(s) 517
RsaI GTAC 2 cut(s) 968, 1410
RsaNI GTAC 2 cut(s) 967, 1409
SaqAI TTAA 1 cut(s) 1470
SatI GCNGC 7 cut(s) 81, 175, 689, 706, 717, 950, 1448
Sau3AI GATC 7 cut(s) 243, 303, 325, 601, 1170, 1300, 1344
Sau96I GGNCC 1 cut(s) 519
SchI GAGTC 2 cut(s) 375, 941
ScrFI CCNGG 4 cut(s) 446, 539, 827, 901
SduI GDGCHC 1 cut(s) 1191
SfaNI GCATC 5 cut(s) 164, 382, 636, 742, 1465
SfcI CTRYAG 1 cut(s) 232
SfoI GGCGCC 1 cut(s) 1229
SfuI TTCGAA 1 cut(s) 618
SinI GGWCC 1 cut(s) 519
SmlI CTYRAG 2 cut(s) 350, 1469
SmoI CTYRAG 2 cut(s) 350, 1469
Sse9I AATT 5 cut(s) 340, 487, 766, 1424, 1457
SseBI AGGCCT 2 cut(s) 108, 356
SsiI CCGC 6 cut(s) 7, 210, 626, 688, 755, 1537
SspDI GGCGCC 1 cut(s) 1227
SspMI CTAG 1 cut(s) 1451
StuI AGGCCT 2 cut(s) 108, 356
StyD4I CCNGG 4 cut(s) 444, 537, 825, 899
StyI CCWWGG 2 cut(s) 213, 1096
TaiI ACGT 2 cut(s) 680, 1422
TaqI TCGA 5 cut(s) 75, 546, 618, 770, 1533
TasI AATT 5 cut(s) 340, 487, 766, 1424, 1457
TauI GCSGC 1 cut(s) 691
TfiI GAWTC 7 cut(s) 283, 436, 467, 620, 925, 1165, 1249
Tru1I TTAA 1 cut(s) 1470
Tru9I TTAA 1 cut(s) 1470
TscAI CASTG 2 cut(s) 174, 1109
TseFI GTSAC 4 cut(s) 307, 862, 1100, 1202
TseI GCWGC 6 cut(s) 80, 174, 705, 716, 949, 1447
Tsp45I GTSAC 4 cut(s) 307, 862, 1100, 1202
TspGWI ACGGA 3 cut(s) 511, 626, 872
TspRI CASTG 2 cut(s) 174, 1109
Tth111I GACNNNGTC 1 cut(s) 517
Vha464I CTTAAG 1 cut(s) 1469
VpaK11BI GGWCC 1 cut(s) 519
XapI RAATTY 2 cut(s) 487, 766
XceI RCATGY 1 cut(s) 695
XmnI GAANNNNTTC 1 cut(s) 568
XspI CTAG 1 cut(s) 1451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.