MD04G1203000.v1.1

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0014758
Physical Location & Seq
Reverse (-)
28868555 .. 28872258
3704 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1203000.v1.1.491

Sequence Viewer

Length: 1569 bp
ATGTCAATTATCACAGGTAGTGCTGCTACTGGGAGTTTCTCTTCAGGAAATACAGGTGGAGAAGAAGTTCAACAGCAACAACAAGAGCTATTAAATCACCATGCAAACTTTCATGGCTCCAACTCCCTCCTTCCAACAACACCTAATATCAATAGCAATGGTATTTCCACTACTCAAGTACAAAAGCAACCTCCACCAGCTAAGAAGAAAAGAAACCTACCAGGAACTCCAGACCCAACTGCTGAAGTGATAGCCTTGTCACCAAAGACCCTGATGGCCACAAACCGGTTTGTATGTGAAATTTGTAAGAAGGGGTTCCAAAGGGACCAAAACCTCCAACTCCACAGAAGAGGTCACAACTTGCCATGGAAGCTTAAGCAAAGAACGAGCACTGAGATCATTAAGCGAGTCTATATCTGCCCCGAATCCTCCTGCGTCCACCACGATCCATCGCGGGCACTCGGGGATCTTACGGGCATCAAAAAGCACTTTTTCCGGAAGCACGGCGAGAAAACCTGGAAATGTGACAAGTGCTCCAAGAAATACGCGGTGCAATCGGACTGGAAAGCTCATCTAAAGACCTGTGGTACTAGAGAATACAAATGTGACTGTGGAACCATCTTCTCCAGAAGAGATAGCTTCATCACCCACAGAGCTTTTTGTGATGCCATAGCTGAAGAGAACAACAGAAACCAAGGAGTAGTACCAATGTCCAACAATATTATGGGAGCACCAAACCAAGGCCAACTTTCCAACAGTGAGCTCATCATCCCGGCATCACCGCCCATGAACAACAAAATCACCGACAACCCATCGTCAGCAAGATCAGATACTACTACATCTGATCAATTTCATCATAATTTTGATGCCAAAAATGCCCCTTTAACCCTAGAACCCCAACAACCCTTCCCAATGCCCACAAAACCCGTAAACATGTTACCGAGAACCCTAAGCAACAACACTTCATCATCAACATCACCATCGTCACTACTGTTCGGATTAAACCACGGCGGGCACGGTCAATCACTCATCCCCAACTCATCAGGCCATTTATCCGCCACGCAACTGCTACAAAAAGCGGCTCAAATGGGTGCAACTATGAGTGGTGGTCCCAACCCTAACCCTAGTGGTACAACCATAACAAGCATGGCACCCTCAACCTATGGTACAGCTACTGGTGGGTACAACATGAACCCCTTCATGCAGCAGAGAGATCCTAATAACATTCTGCAATTAGAGACCTCGCCGCAGTTTTTTGGCGCTAATTATGCGCAAATGGGGATGTTTAGCGGGATGTTATTCGATCATGCTCAGAACAATGGTTTGTTGAAGAACATGGAGCATGAAAATAATGGGACTTCAAATAAAATAGGGTTCAGGGGTGCTAGTAATGTGAGTAACGGTGATACGTTGACCGTTGACTTTTTAGGGCTTGGAGGATCGGGTAATAATAATAGACCAGAAAACTTTCATGATCTGCAGAAACAACAACATGGCCAGCAAGATCAGCTGGGGTTCGGAGGAATTGATGATCATGATGATCACCTAAGAATGCAAAGATTTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz

Protein Analysis

523

Amino Acids

57.09

Weight (kDa)

8.99

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 135 - 168 5.4e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 173 - 196 7.1e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 199 - 237 4.3e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014758)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g06270 FvH4_6g06270
malus_domestica MD04G1203000.v1.1 MD12G1216800.v1.1
prunus_persica Prupe.6G323100_v2.0.a1
pyrus_communis pycom04g17930 pycom12g20230
rosa_chinensis RchiOBHm_Chr3g0455311
rosa_laevigata RLG00000025371
rosa_roxburghii Rroxscaffold_6G00424390
rosa_rugosa Rorug03G0006000 Rorug03G0006100
rosa_samantha Rh3AG065900 Rh3BG068000 Rh3CG066400 Rh3DG068000
rosa_wichuraiana Rw3G005190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1272
AccB1I GGYRCC 1 cut(s) 1150
AccII CGCG 2 cut(s) 454, 548
AccIII TCCGGA 1 cut(s) 495
AciI CCGC 8 cut(s) 454, 548, 782, 1011, 1056, 1079, 1247, 1290
AclWI GGATC 4 cut(s) 440, 474, 1208, 1447
AcoI YGGCCR 2 cut(s) 276, 1495
AcsI RAATTY 1 cut(s) 300
AcuI CTGAAG 3 cut(s) 27, 264, 696
AfaI GTAC 6 cut(s) 180, 589, 705, 1132, 1168, 1184
AfiI CCNNNNNNNGG 2 cut(s) 285, 740
AflII CTTAAG 1 cut(s) 374
AflIII ACRYGT 1 cut(s) 933
AgeI ACCGGT 1 cut(s) 285
AgsI TTSAA 3 cut(s) 71, 1330, 1362
AjnI CCWGG 2 cut(s) 220, 515
AloI GAACNNNNNNTCC 2 cut(s) 51, 83
Alw21I GWGCWC 4 cut(s) 392, 536, 733, 765
Alw26I GTCTC 1 cut(s) 1232
AlwI GGATC 4 cut(s) 440, 474, 1208, 1447
AlwNI CAGNNNCTG 1 cut(s) 1175
Ama87I CYCGRG 1 cut(s) 461
Aor13HI TCCGGA 1 cut(s) 495
AoxI GGCC 4 cut(s) 276, 742, 1045, 1495
ApeKI GCWGC 2 cut(s) 23, 1204
ApoI RAATTY 1 cut(s) 300
AsiGI ACCGGT 1 cut(s) 285
Asp700I GAANNNNTTC 4 cut(s) 66, 314, 1196, 1467
AspLEI GCGC 2 cut(s) 1262, 1273
AspS9I GGNCC 2 cut(s) 325, 1109
AsuC2I CCSGG 1 cut(s) 773
AsuHPI GGTGA 8 cut(s) 89, 252, 637, 771, 793, 969, 1415, 1535
AvaI CYCGRG 1 cut(s) 461
AvaII GGWCC 2 cut(s) 325, 1109
BaeGI GKGCMC 2 cut(s) 460, 1017
BalI TGGCCA 2 cut(s) 278, 1497
BanI GGYRCC 1 cut(s) 1150
BanII GRGCYC 1 cut(s) 765
Bbv12I GWGCWC 4 cut(s) 392, 536, 733, 765
BbvI GCAGC 2 cut(s) 10, 1216
BccI CCATC 5 cut(s) 268, 457, 626, 820, 988
BceAI ACGGC 2 cut(s) 520, 1024
BciT130I CCWGG 2 cut(s) 222, 517
BclI TGATCA 3 cut(s) 844, 1531, 1540
BcnI CCSGG 1 cut(s) 773
BcoDI GTCTC 1 cut(s) 1232
BfaI CTAG 4 cut(s) 591, 890, 1125, 1386
BfmI CTRYAG 1 cut(s) 1478
BfoI RGCGCY 1 cut(s) 1263
BfrI CTTAAG 1 cut(s) 374
BisI GCNGC 4 cut(s) 24, 1080, 1205, 1247
BlsI GCNGC 4 cut(s) 25, 1081, 1206, 1248
Bme1390I CCNGG 3 cut(s) 222, 517, 773
Bme18I GGWCC 2 cut(s) 325, 1109
BmeT110I CYCGRG 1 cut(s) 461
BmgT120I GGNCC 2 cut(s) 325, 1109
BmiI GGNNCC 6 cut(s) 118, 317, 326, 616, 1111, 1152
BmrFI CCNGG 3 cut(s) 222, 517, 773
BmrI ACTGGG 1 cut(s) 39
BmsI GCATC 4 cut(s) 486, 655, 785, 856
BmuI ACTGGG 1 cut(s) 39
BpmI CTGGAG 2 cut(s) 213, 610
Bpu10I CCTNAGC 1 cut(s) 950
BpuEI CTTGAG 1 cut(s) 159
BpuMI CCSGG 1 cut(s) 773
BsaI GGTCTC 1 cut(s) 1232
BsaJI CCNNGG 4 cut(s) 365, 694, 739, 1006
BsaWI WCCGGW 2 cut(s) 285, 495
BsaXI ACNNNNNCTCC 4 cut(s) 51, 81, 518, 548
Bsc4I CCNNNNNNNGG 2 cut(s) 285, 740
Bse118I RCCGGY 1 cut(s) 285
Bse1I ACTGG 3 cut(s) 34, 566, 1180
Bse3DI GCAATG 1 cut(s) 163
BseAI TCCGGA 1 cut(s) 495
BseBI CCWGG 2 cut(s) 222, 517
BseDI CCNNGG 4 cut(s) 365, 694, 739, 1006
BseGI GGATG 4 cut(s) 768, 1029, 1287, 1299
BseLI CCNNNNNNNGG 2 cut(s) 285, 740
BseMI GCAATG 1 cut(s) 163
BseMII CTCAG 2 cut(s) 384, 1325
BseNI ACTGG 3 cut(s) 34, 566, 1180
BseSI GKGCMC 2 cut(s) 460, 1017
BseXI GCAGC 2 cut(s) 10, 1216
BseYI CCCAGC 1 cut(s) 1510
Bsh1236I CGCG 2 cut(s) 454, 548
BshFI GGCC 4 cut(s) 278, 744, 1047, 1497
BshNI GGYRCC 1 cut(s) 1150
BshTI ACCGGT 1 cut(s) 285
BsiHKAI GWGCWC 4 cut(s) 392, 536, 733, 765
BsiHKCI CYCGRG 1 cut(s) 461
BsiSI CCGG 3 cut(s) 286, 496, 773
BslFI GGGAC 3 cut(s) 338, 1095, 1369
BslI CCNNNNNNNGG 2 cut(s) 285, 740
BsmAI GTCTC 1 cut(s) 1232
BsmFI GGGAC 3 cut(s) 338, 1095, 1369
BsmI GAATGC 1 cut(s) 1557
BsnI GGCC 4 cut(s) 278, 744, 1047, 1497
Bso31I GGTCTC 1 cut(s) 1232
BsoBI CYCGRG 1 cut(s) 461
Bsp1286I GDGCHC 6 cut(s) 392, 460, 536, 733, 765, 1017
Bsp13I TCCGGA 1 cut(s) 495
Bsp19I CCATGG 1 cut(s) 365
BspACI CCGC 8 cut(s) 454, 548, 782, 1011, 1056, 1079, 1247, 1290
BspANI GGCC 4 cut(s) 278, 744, 1047, 1497
BspCNI CTCAG 2 cut(s) 385, 1324
BspEI TCCGGA 1 cut(s) 495
BspFNI CGCG 2 cut(s) 454, 548
BspHI TCATGA 2 cut(s) 1471, 1534
BspLI GGNNCC 6 cut(s) 118, 317, 326, 616, 1111, 1152
BspMAI CTGCAG 1 cut(s) 1482
BspPI GGATC 4 cut(s) 440, 474, 1208, 1447
BspT107I GGYRCC 1 cut(s) 1150
BspTI CTTAAG 1 cut(s) 374
BspTNI GGTCTC 1 cut(s) 1232
BsrDI GCAATG 1 cut(s) 163
BsrFI RCCGGY 1 cut(s) 285
BsrI ACTGG 3 cut(s) 34, 566, 1180
BssAI RCCGGY 1 cut(s) 285
BssECI CCNNGG 4 cut(s) 365, 694, 739, 1006
BssT1I CCWWGG 3 cut(s) 365, 694, 739
Bst2UI CCWGG 2 cut(s) 222, 517
Bst4CI ACNGT 6 cut(s) 611, 758, 993, 1019, 1403, 1417
Bst6I CTCTTC 4 cut(s) 46, 343, 625, 672
BstAFI CTTAAG 1 cut(s) 374
BstC8I GCNNGC 3 cut(s) 456, 1013, 1499
BstDEI CTNAG 5 cut(s) 201, 393, 950, 1311, 1547
BstDSI CCRYGG 2 cut(s) 365, 1006
BstF5I GGATG 4 cut(s) 768, 1029, 1287, 1299
BstFNI CGCG 2 cut(s) 454, 548
BstH2I RGCGCY 1 cut(s) 1263
BstHHI GCGC 2 cut(s) 1262, 1273
BstMAI GTCTC 1 cut(s) 1232
BstMWI GCNNNNNNNGC 4 cut(s) 370, 875, 1268, 1507
BstNI CCWGG 2 cut(s) 222, 517
BstNSI RCATGY 1 cut(s) 937
BstSCI CCNGG 3 cut(s) 220, 515, 771
BstSFI CTRYAG 1 cut(s) 1478
BstSLI GKGCMC 2 cut(s) 460, 1017
BstUI CGCG 2 cut(s) 454, 548
BstV1I GCAGC 2 cut(s) 10, 1216
BstX2I RGATCY 2 cut(s) 466, 1213
BstYI RGATCY 2 cut(s) 466, 1213
BsuRI GGCC 4 cut(s) 278, 744, 1047, 1497
BtgI CCRYGG 2 cut(s) 365, 1006
BtgZI GCGATG 1 cut(s) 435
BtsCI GGATG 4 cut(s) 768, 1029, 1287, 1299
BtsIMutI CAGTG 2 cut(s) 390, 763
Cac8I GCNNGC 3 cut(s) 456, 1013, 1499
CaiI CAGNNNCTG 1 cut(s) 1175
CciI TCATGA 2 cut(s) 1471, 1534
CfoI GCGC 2 cut(s) 1262, 1273
Cfr10I RCCGGY 1 cut(s) 285
Cfr13I GGNCC 2 cut(s) 325, 1109
CseI GACGC 1 cut(s) 424
Csp6I GTAC 6 cut(s) 179, 588, 704, 1131, 1167, 1183
CspAI ACCGGT 1 cut(s) 285
CviQI GTAC 6 cut(s) 179, 588, 704, 1131, 1167, 1183
DdeI CTNAG 5 cut(s) 201, 393, 950, 1311, 1547
EaeI YGGCCR 2 cut(s) 276, 1495
Eam1104I CTCTTC 4 cut(s) 46, 343, 625, 672
EarI CTCTTC 4 cut(s) 46, 343, 625, 672
EciI GGCGGA 1 cut(s) 1045
Ecl136II GAGCTC 1 cut(s) 763
Eco130I CCWWGG 3 cut(s) 365, 694, 739
Eco24I GRGCYC 1 cut(s) 765
Eco31I GGTCTC 1 cut(s) 1232
Eco47I GGWCC 2 cut(s) 325, 1109
Eco53kI GAGCTC 1 cut(s) 763
Eco57I CTGAAG 3 cut(s) 27, 264, 696
Eco88I CYCGRG 1 cut(s) 461
EcoICRI GAGCTC 1 cut(s) 763
EcoRII CCWGG 2 cut(s) 220, 515
EcoT14I CCWWGG 3 cut(s) 365, 694, 739
EcoT38I GRGCYC 1 cut(s) 765
ErhI CCWWGG 3 cut(s) 365, 694, 739
FalI AAGNNNNNCTT 2 cut(s) 732, 764
FaqI GGGAC 3 cut(s) 338, 1095, 1369
FauI CCCGC 3 cut(s) 447, 1004, 1283
FbaI TGATCA 3 cut(s) 844, 1531, 1540
Fnu4HI GCNGC 4 cut(s) 24, 1080, 1205, 1247
FokI GGATG 4 cut(s) 755, 1016, 1294, 1306
FriOI GRGCYC 1 cut(s) 765
Fsp4HI GCNGC 4 cut(s) 24, 1080, 1205, 1247
FspBI CTAG 4 cut(s) 591, 890, 1125, 1386
FspI TGCGCA 1 cut(s) 1272
GlaI GCGC 2 cut(s) 1261, 1272
GluI GCNGC 4 cut(s) 24, 1080, 1205, 1247
GsaI CCCAGC 1 cut(s) 1514
GsuI CTGGAG 2 cut(s) 213, 610
HaeII RGCGCY 1 cut(s) 1263
HaeIII GGCC 4 cut(s) 278, 744, 1047, 1497
HapII CCGG 3 cut(s) 286, 496, 773
HgaI GACGC 1 cut(s) 424
HhaI GCGC 2 cut(s) 1262, 1273
Hin6I GCGC 2 cut(s) 1260, 1271
HinP1I GCGC 2 cut(s) 1260, 1271
HincII GTYRAC 2 cut(s) 1413, 1420
HindII GTYRAC 2 cut(s) 1413, 1420
HindIII AAGCTT 1 cut(s) 371
HinfI GANTC 2 cut(s) 408, 425
HpaII CCGG 3 cut(s) 286, 496, 773
HphI GGTGA 8 cut(s) 89, 252, 637, 771, 793, 969, 1415, 1535
Hpy166II GTNNAC 4 cut(s) 439, 931, 1413, 1420
Hpy188I TCNGA 6 cut(s) 559, 829, 844, 998, 1314, 1520
Hpy188III TCNNGA 6 cut(s) 45, 230, 496, 627, 1472, 1535
Hpy8I GTNNAC 4 cut(s) 439, 931, 1413, 1420
HpyAV CCTTC 4 cut(s) 140, 304, 916, 1207
HpyCH4III ACNGT 6 cut(s) 611, 758, 993, 1019, 1403, 1417
HpyCH4IV ACGT 1 cut(s) 1409
HpyCH4V TGCA 7 cut(s) 104, 553, 1094, 1204, 1231, 1480, 1555
HpyF10VI GCNNNNNNNGC 4 cut(s) 370, 875, 1268, 1507
HpyF3I CTNAG 5 cut(s) 201, 393, 950, 1311, 1547
HpySE526I ACGT 1 cut(s) 1409
HspAI GCGC 2 cut(s) 1260, 1271
Kpn2I TCCGGA 1 cut(s) 495
Ksp22I TGATCA 3 cut(s) 844, 1531, 1540
LmnI GCTCC 4 cut(s) 122, 539, 728, 1339
Lsp1109I GCAGC 2 cut(s) 10, 1216
LweI GCATC 4 cut(s) 486, 655, 785, 856
MaeI CTAG 4 cut(s) 591, 890, 1125, 1386
MaeII ACGT 1 cut(s) 1409
MaeIII GTNAC 7 cut(s) 258, 353, 524, 605, 936, 984, 1397
MboII GAAGA 8 cut(s) 33, 74, 217, 360, 613, 642, 689, 1342
MflI RGATCY 2 cut(s) 466, 1213
MhlI GDGCHC 6 cut(s) 392, 460, 536, 733, 765, 1017
MlsI TGGCCA 2 cut(s) 278, 1497
MluCI AATT 7 cut(s) 6, 300, 848, 859, 1232, 1264, 1524
MluNI TGGCCA 2 cut(s) 278, 1497
MlyI GAGTC 1 cut(s) 417
MmeI TCCRAC 5 cut(s) 144, 158, 361, 738, 777
MnlI CCTC 9 cut(s) 137, 201, 344, 344, 439, 1165, 1252, 1430, 1514
Mox20I TGGCCA 2 cut(s) 278, 1497
MroI TCCGGA 1 cut(s) 495
MroXI GAANNNNTTC 4 cut(s) 66, 314, 1196, 1467
MscI TGGCCA 2 cut(s) 278, 1497
MseI TTAA 5 cut(s) 92, 375, 402, 884, 1001
Msp20I TGGCCA 2 cut(s) 278, 1497
MspA1I CMGCKG 1 cut(s) 1510
MspCI CTTAAG 1 cut(s) 374
MspI CCGG 3 cut(s) 286, 496, 773
MspR9I CCNGG 3 cut(s) 222, 517, 773
Mva1269I GAATGC 1 cut(s) 1557
MvaI CCWGG 2 cut(s) 222, 517
MvnI CGCG 2 cut(s) 454, 548
MwoI GCNNNNNNNGC 4 cut(s) 370, 875, 1268, 1507
NciI CCSGG 1 cut(s) 773
NcoI CCATGG 1 cut(s) 365
NlaIV GGNNCC 6 cut(s) 118, 317, 326, 616, 1111, 1152
NmuCI GTSAC 5 cut(s) 258, 353, 524, 605, 984
NsbI TGCGCA 1 cut(s) 1272
NspI RCATGY 1 cut(s) 937
PagI TCATGA 2 cut(s) 1471, 1534
PciI ACATGT 1 cut(s) 933
PctI GAATGC 1 cut(s) 1557
PdmI GAANNNNTTC 4 cut(s) 66, 314, 1196, 1467
PfeI GAWTC 1 cut(s) 425
PinAI ACCGGT 1 cut(s) 285
PkrI GCNGC 4 cut(s) 25, 1081, 1206, 1248
PleI GAGTC 1 cut(s) 416
PpsI GAGTC 1 cut(s) 416
PscI ACATGT 1 cut(s) 933
Psp124BI GAGCTC 1 cut(s) 765
Psp6I CCWGG 2 cut(s) 220, 515
PspFI CCCAGC 1 cut(s) 1510
PspGI CCWGG 2 cut(s) 220, 515
PspN4I GGNNCC 6 cut(s) 118, 317, 326, 616, 1111, 1152
PspPI GGNCC 2 cut(s) 325, 1109
PstI CTGCAG 1 cut(s) 1482
PstNI CAGNNNCTG 1 cut(s) 1175
PsuI RGATCY 2 cut(s) 466, 1213
PvuII CAGCTG 1 cut(s) 1510
RsaI GTAC 6 cut(s) 180, 589, 705, 1132, 1168, 1184
RsaNI GTAC 6 cut(s) 179, 588, 704, 1131, 1167, 1183
SacI GAGCTC 1 cut(s) 765
SaqAI TTAA 5 cut(s) 92, 375, 402, 884, 1001
SatI GCNGC 4 cut(s) 24, 1080, 1205, 1247
Sau96I GGNCC 2 cut(s) 325, 1109
SchI GAGTC 1 cut(s) 417
ScrFI CCNGG 3 cut(s) 222, 517, 773
SduI GDGCHC 6 cut(s) 392, 460, 536, 733, 765, 1017
SfaNI GCATC 4 cut(s) 486, 655, 785, 856
SfcI CTRYAG 1 cut(s) 1478
SinI GGWCC 2 cut(s) 325, 1109
SmlI CTYRAG 2 cut(s) 174, 374
SmoI CTYRAG 2 cut(s) 174, 374
Sse9I AATT 7 cut(s) 6, 300, 848, 859, 1232, 1264, 1524
SsiI CCGC 8 cut(s) 454, 548, 782, 1011, 1056, 1079, 1247, 1290
SspI AATATT 1 cut(s) 721
SspMI CTAG 4 cut(s) 591, 890, 1125, 1386
SstI GAGCTC 1 cut(s) 765
StyD4I CCNGG 3 cut(s) 220, 515, 771
StyI CCWWGG 3 cut(s) 365, 694, 739
TaaI ACNGT 6 cut(s) 611, 758, 993, 1019, 1403, 1417
TaiI ACGT 1 cut(s) 1412
TaqI TCGA 1 cut(s) 1302
TasI AATT 7 cut(s) 6, 300, 848, 859, 1232, 1264, 1524
TatI WGTACW 1 cut(s) 178
TauI GCSGC 2 cut(s) 1082, 1249
TfiI GAWTC 1 cut(s) 425
Tru1I TTAA 5 cut(s) 92, 375, 402, 884, 1001
Tru9I TTAA 5 cut(s) 92, 375, 402, 884, 1001
TscAI CASTG 2 cut(s) 397, 763
TseFI GTSAC 5 cut(s) 258, 353, 524, 605, 984
TseI GCWGC 2 cut(s) 23, 1204
Tsp45I GTSAC 5 cut(s) 258, 353, 524, 605, 984
TspDTI ATGAA 9 cut(s) 101, 631, 803, 842, 954, 1189, 1205, 1359, 1460
TspRI CASTG 2 cut(s) 397, 763
Vha464I CTTAAG 1 cut(s) 374
VpaK11BI GGWCC 2 cut(s) 325, 1109
XapI RAATTY 1 cut(s) 300
XceI RCATGY 1 cut(s) 937
XcmI CCANNNNNNNNNTGG 2 cut(s) 721, 1144
XmnI GAANNNNTTC 4 cut(s) 66, 314, 1196, 1467
XspI CTAG 4 cut(s) 591, 890, 1125, 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.