ZINC FINGER protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g06270 FvH4_6g06270 |
| malus_domestica | MD04G1203000.v1.1 MD12G1216800.v1.1 |
| prunus_persica | Prupe.6G323100_v2.0.a1 |
| pyrus_communis | pycom04g17930 pycom12g20230 |
| rosa_chinensis | RchiOBHm_Chr3g0455311 |
| rosa_laevigata | RLG00000025371 |
| rosa_roxburghii | Rroxscaffold_6G00424390 |
| rosa_rugosa | Rorug03G0006000 Rorug03G0006100 |
| rosa_samantha | Rh3AG065900 Rh3BG068000 Rh3CG066400 Rh3DG068000 |
| rosa_wichuraiana | Rw3G005190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 5 |
| AccB1I | GGYRCC | 1 cut(s) | 1162 |
| AccII | CGCG | 2 cut(s) | 451, 545 |
| AciI | CCGC | 8 cut(s) | 57, 451, 545, 927, 1068, 1091, 1238, 1280 |
| AclWI | GGATC | 3 cut(s) | 471, 948, 1453 |
| AcoI | YGGCCR | 2 cut(s) | 273, 1021 |
| AcsI | RAATTY | 3 cut(s) | 297, 1471, 1529 |
| AcuI | CTGAAG | 3 cut(s) | 27, 261, 693 |
| AfaI | GTAC | 7 cut(s) | 177, 542, 586, 705, 1144, 1180, 1196 |
| AfeI | AGCGCT | 1 cut(s) | 1270 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 282, 1136 |
| AflII | CTTAAG | 1 cut(s) | 371 |
| AflIII | ACRYGT | 1 cut(s) | 942 |
| AgeI | ACCGGT | 1 cut(s) | 282 |
| AgsI | TTSAA | 3 cut(s) | 71, 573, 1336 |
| AjnI | CCWGG | 2 cut(s) | 217, 1135 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 51, 83 |
| Alw21I | GWGCWC | 3 cut(s) | 533, 733, 771 |
| Alw26I | GTCTC | 1 cut(s) | 1241 |
| AlwI | GGATC | 3 cut(s) | 471, 948, 1453 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 29 |
| Ama87I | CYCGRG | 1 cut(s) | 458 |
| Aor51HI | AGCGCT | 1 cut(s) | 1270 |
| AoxI | GGCC | 4 cut(s) | 273, 748, 1021, 1057 |
| ApeKI | GCWGC | 2 cut(s) | 23, 1216 |
| ApoI | RAATTY | 3 cut(s) | 297, 1471, 1529 |
| AseI | ATTAAT | 1 cut(s) | 1458 |
| AsiGI | ACCGGT | 1 cut(s) | 282 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 66, 311, 1473 |
| AspLEI | GCGC | 1 cut(s) | 1271 |
| AspS9I | GGNCC | 3 cut(s) | 322, 443, 1121 |
| AsuII | TTCGAA | 1 cut(s) | 1008 |
| AvaI | CYCGRG | 1 cut(s) | 458 |
| AvaII | GGWCC | 3 cut(s) | 322, 443, 1121 |
| BaeGI | GKGCMC | 1 cut(s) | 457 |
| BalI | TGGCCA | 1 cut(s) | 275 |
| BanI | GGYRCC | 1 cut(s) | 1162 |
| BanII | GRGCYC | 1 cut(s) | 771 |
| Bbv12I | GWGCWC | 3 cut(s) | 533, 733, 771 |
| BbvI | GCAGC | 2 cut(s) | 35, 1228 |
| BccI | CCATC | 7 cut(s) | 265, 444, 454, 623, 832, 994, 1000 |
| BceAI | ACGGC | 2 cut(s) | 346, 1036 |
| BciT130I | CCWGG | 2 cut(s) | 219, 1137 |
| BclI | TGATCA | 2 cut(s) | 1480, 1543 |
| BcoDI | GTCTC | 1 cut(s) | 1241 |
| BfaI | CTAG | 3 cut(s) | 588, 899, 1392 |
| BfoI | RGCGCY | 1 cut(s) | 1272 |
| BfrI | CTTAAG | 1 cut(s) | 371 |
| BfuAI | ACCTGC | 1 cut(s) | 5 |
| BglII | AGATCT | 1 cut(s) | 576 |
| BisI | GCNGC | 3 cut(s) | 24, 1092, 1217 |
| BlsI | GCNGC | 3 cut(s) | 25, 1093, 1218 |
| BmcAI | AGTACT | 1 cut(s) | 705 |
| Bme1390I | CCNGG | 2 cut(s) | 219, 1137 |
| Bme18I | GGWCC | 3 cut(s) | 322, 443, 1121 |
| BmeT110I | CYCGRG | 1 cut(s) | 458 |
| BmgT120I | GGNCC | 3 cut(s) | 322, 443, 1121 |
| BmiI | GGNNCC | 5 cut(s) | 118, 314, 323, 613, 1164 |
| BmrFI | CCNGG | 2 cut(s) | 219, 1137 |
| BmrI | ACTGGG | 1 cut(s) | 39 |
| BmsI | GCATC | 2 cut(s) | 483, 865 |
| BmuI | ACTGGG | 1 cut(s) | 39 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 515, 547 |
| BpmI | CTGGAG | 2 cut(s) | 210, 607 |
| Bpu14I | TTCGAA | 1 cut(s) | 1008 |
| BpuEI | CTTGAG | 1 cut(s) | 156 |
| Bsa29I | ATCGAT | 1 cut(s) | 147 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1314, 1542 |
| BsaI | GGTCTC | 1 cut(s) | 1241 |
| BsaJI | CCNNGG | 4 cut(s) | 112, 362, 694, 1135 |
| BsaWI | WCCGGW | 1 cut(s) | 282 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 51, 81 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 282, 1136 |
| Bse118I | RCCGGY | 3 cut(s) | 193, 282, 1023 |
| Bse1I | ACTGG | 3 cut(s) | 34, 563, 1192 |
| Bse3DI | GCAATG | 1 cut(s) | 160 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1314, 1542 |
| BseBI | CCWGG | 2 cut(s) | 219, 1137 |
| BseCI | ATCGAT | 1 cut(s) | 147 |
| BseDI | CCNNGG | 4 cut(s) | 112, 362, 694, 1135 |
| BseGI | GGATG | 2 cut(s) | 774, 1041 |
| BseJI | GATNNNNATC | 2 cut(s) | 1314, 1542 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 282, 1136 |
| BseMI | GCAATG | 1 cut(s) | 160 |
| BseMII | CTCAG | 1 cut(s) | 1103 |
| BseNI | ACTGG | 3 cut(s) | 34, 563, 1192 |
| BseSI | GKGCMC | 1 cut(s) | 457 |
| BseX3I | CGGCCG | 1 cut(s) | 1021 |
| BseXI | GCAGC | 2 cut(s) | 35, 1228 |
| BseYI | CCCAGC | 1 cut(s) | 1046 |
| BsgI | GTGCAG | 1 cut(s) | 42 |
| Bsh1236I | CGCG | 2 cut(s) | 451, 545 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1024 |
| BshFI | GGCC | 4 cut(s) | 275, 750, 1023, 1059 |
| BshNI | GGYRCC | 1 cut(s) | 1162 |
| BshTI | ACCGGT | 1 cut(s) | 282 |
| BshVI | ATCGAT | 1 cut(s) | 147 |
| BsiEI | CGRYCG | 1 cut(s) | 1024 |
| BsiHKAI | GWGCWC | 3 cut(s) | 533, 733, 771 |
| BsiHKCI | CYCGRG | 1 cut(s) | 458 |
| BsiSI | CCGG | 4 cut(s) | 194, 283, 493, 1024 |
| BslFI | GGGAC | 2 cut(s) | 335, 1375 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 282, 1136 |
| BsmAI | GTCTC | 1 cut(s) | 1241 |
| BsmFI | GGGAC | 2 cut(s) | 335, 1375 |
| BsnI | GGCC | 4 cut(s) | 275, 750, 1023, 1059 |
| Bso31I | GGTCTC | 1 cut(s) | 1241 |
| BsoBI | CYCGRG | 1 cut(s) | 458 |
| Bsp119I | TTCGAA | 1 cut(s) | 1008 |
| Bsp1286I | GDGCHC | 4 cut(s) | 457, 533, 733, 771 |
| Bsp19I | CCATGG | 1 cut(s) | 112 |
| BspACI | CCGC | 8 cut(s) | 57, 451, 545, 927, 1068, 1091, 1238, 1280 |
| BspANI | GGCC | 4 cut(s) | 275, 750, 1023, 1059 |
| BspCNI | CTCAG | 1 cut(s) | 1104 |
| BspDI | ATCGAT | 1 cut(s) | 147 |
| BspFNI | CGCG | 2 cut(s) | 451, 545 |
| BspHI | TCATGA | 1 cut(s) | 1477 |
| BspLI | GGNNCC | 5 cut(s) | 118, 314, 323, 613, 1164 |
| BspMI | ACCTGC | 1 cut(s) | 5 |
| BspPI | GGATC | 3 cut(s) | 471, 948, 1453 |
| BspT104I | TTCGAA | 1 cut(s) | 1008 |
| BspT107I | GGYRCC | 1 cut(s) | 1162 |
| BspTI | CTTAAG | 1 cut(s) | 371 |
| BspTNI | GGTCTC | 1 cut(s) | 1241 |
| BsrDI | GCAATG | 1 cut(s) | 160 |
| BsrFI | RCCGGY | 3 cut(s) | 193, 282, 1023 |
| BsrI | ACTGG | 3 cut(s) | 34, 563, 1192 |
| BssAI | RCCGGY | 3 cut(s) | 193, 282, 1023 |
| BssECI | CCNNGG | 4 cut(s) | 112, 362, 694, 1135 |
| BssT1I | CCWWGG | 2 cut(s) | 112, 694 |
| Bst2UI | CCWGG | 2 cut(s) | 219, 1137 |
| Bst4CI | ACNGT | 6 cut(s) | 443, 608, 764, 1031, 1260, 1423 |
| Bst6I | CTCTTC | 5 cut(s) | 46, 340, 622, 669, 1010 |
| BstAFI | CTTAAG | 1 cut(s) | 371 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 20 |
| BstBI | TTCGAA | 1 cut(s) | 1008 |
| BstC8I | GCNNGC | 2 cut(s) | 453, 1025 |
| BstDEI | CTNAG | 2 cut(s) | 198, 1112 |
| BstDSI | CCRYGG | 2 cut(s) | 112, 362 |
| BstF5I | GGATG | 2 cut(s) | 774, 1041 |
| BstFNI | CGCG | 2 cut(s) | 451, 545 |
| BstH2I | RGCGCY | 1 cut(s) | 1272 |
| BstHHI | GCGC | 1 cut(s) | 1271 |
| BstMAI | GTCTC | 1 cut(s) | 1241 |
| BstMCI | CGRYCG | 1 cut(s) | 1024 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 20, 367, 1056, 1277 |
| BstNI | CCWGG | 2 cut(s) | 219, 1137 |
| BstNSI | RCATGY | 1 cut(s) | 946 |
| BstSCI | CCNGG | 2 cut(s) | 217, 1135 |
| BstSLI | GKGCMC | 1 cut(s) | 457 |
| BstUI | CGCG | 2 cut(s) | 451, 545 |
| BstV1I | GCAGC | 2 cut(s) | 35, 1228 |
| BstX2I | RGATCY | 3 cut(s) | 463, 576, 953 |
| BstYI | RGATCY | 3 cut(s) | 463, 576, 953 |
| BstZI | CGGCCG | 1 cut(s) | 1021 |
| Bsu15I | ATCGAT | 1 cut(s) | 147 |
| BsuRI | GGCC | 4 cut(s) | 275, 750, 1023, 1059 |
| BsuTUI | ATCGAT | 1 cut(s) | 147 |
| BtgI | CCRYGG | 2 cut(s) | 112, 362 |
| BtgZI | GCGATG | 1 cut(s) | 432 |
| BtsCI | GGATG | 2 cut(s) | 774, 1041 |
| BtsI | GCAGTG | 2 cut(s) | 165, 394 |
| BtsIMutI | CAGTG | 3 cut(s) | 165, 394, 769 |
| BveI | ACCTGC | 1 cut(s) | 5 |
| Cac8I | GCNNGC | 2 cut(s) | 453, 1025 |
| CaiI | CAGNNNCTG | 1 cut(s) | 29 |
| CciI | TCATGA | 1 cut(s) | 1477 |
| CfoI | GCGC | 1 cut(s) | 1271 |
| Cfr10I | RCCGGY | 3 cut(s) | 193, 282, 1023 |
| Cfr13I | GGNCC | 3 cut(s) | 322, 443, 1121 |
| ClaI | ATCGAT | 1 cut(s) | 147 |
| CseI | GACGC | 1 cut(s) | 421 |
| Csp6I | GTAC | 7 cut(s) | 176, 541, 585, 704, 1143, 1179, 1195 |
| CspAI | ACCGGT | 1 cut(s) | 282 |
| CviQI | GTAC | 7 cut(s) | 176, 541, 585, 704, 1143, 1179, 1195 |
| DdeI | CTNAG | 2 cut(s) | 198, 1112 |
| EaeI | YGGCCR | 2 cut(s) | 273, 1021 |
| EagI | CGGCCG | 1 cut(s) | 1021 |
| Eam1104I | CTCTTC | 5 cut(s) | 46, 340, 622, 669, 1010 |
| EarI | CTCTTC | 5 cut(s) | 46, 340, 622, 669, 1010 |
| EciI | GGCGGA | 2 cut(s) | 72, 1057 |
| Ecl136II | GAGCTC | 1 cut(s) | 769 |
| EclXI | CGGCCG | 1 cut(s) | 1021 |
| Eco130I | CCWWGG | 2 cut(s) | 112, 694 |
| Eco24I | GRGCYC | 1 cut(s) | 771 |
| Eco31I | GGTCTC | 1 cut(s) | 1241 |
| Eco47I | GGWCC | 3 cut(s) | 322, 443, 1121 |
| Eco47III | AGCGCT | 1 cut(s) | 1270 |
| Eco52I | CGGCCG | 1 cut(s) | 1021 |
| Eco53kI | GAGCTC | 1 cut(s) | 769 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 261, 693 |
| Eco88I | CYCGRG | 1 cut(s) | 458 |
| EcoICRI | GAGCTC | 1 cut(s) | 769 |
| EcoRII | CCWGG | 2 cut(s) | 217, 1135 |
| EcoT14I | CCWWGG | 2 cut(s) | 112, 694 |
| EcoT38I | GRGCYC | 1 cut(s) | 771 |
| ErhI | CCWWGG | 2 cut(s) | 112, 694 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 738, 770 |
| FaqI | GGGAC | 2 cut(s) | 335, 1375 |
| FauI | CCCGC | 2 cut(s) | 444, 934 |
| FbaI | TGATCA | 2 cut(s) | 1480, 1543 |
| Fnu4HI | GCNGC | 3 cut(s) | 24, 1092, 1217 |
| FokI | GGATG | 2 cut(s) | 761, 1028 |
| FriOI | GRGCYC | 1 cut(s) | 771 |
| Fsp4HI | GCNGC | 3 cut(s) | 24, 1092, 1217 |
| FspBI | CTAG | 3 cut(s) | 588, 899, 1392 |
| GlaI | GCGC | 1 cut(s) | 1270 |
| GluI | GCNGC | 3 cut(s) | 24, 1092, 1217 |
| GsaI | CCCAGC | 1 cut(s) | 1050 |
| GsuI | CTGGAG | 2 cut(s) | 210, 607 |
| HaeII | RGCGCY | 1 cut(s) | 1272 |
| HaeIII | GGCC | 4 cut(s) | 275, 750, 1023, 1059 |
| HapII | CCGG | 4 cut(s) | 194, 283, 493, 1024 |
| HgaI | GACGC | 1 cut(s) | 421 |
| HhaI | GCGC | 1 cut(s) | 1271 |
| Hin6I | GCGC | 1 cut(s) | 1269 |
| HinP1I | GCGC | 1 cut(s) | 1269 |
| HincII | GTYRAC | 2 cut(s) | 1426, 1505 |
| HindII | GTYRAC | 2 cut(s) | 1426, 1505 |
| HindIII | AAGCTT | 1 cut(s) | 368 |
| HinfI | GANTC | 2 cut(s) | 405, 1363 |
| HpaII | CCGG | 4 cut(s) | 194, 283, 493, 1024 |
| Hpy166II | GTNNAC | 2 cut(s) | 1426, 1505 |
| Hpy188I | TCNGA | 4 cut(s) | 556, 838, 1113, 1320 |
| Hpy188III | TCNNGA | 5 cut(s) | 45, 227, 624, 1333, 1478 |
| Hpy8I | GTNNAC | 2 cut(s) | 1426, 1505 |
| HpyAV | CCTTC | 4 cut(s) | 136, 140, 301, 925 |
| HpyCH4III | ACNGT | 6 cut(s) | 443, 608, 764, 1031, 1260, 1423 |
| HpyCH4IV | ACGT | 1 cut(s) | 1299 |
| HpyCH4V | TGCA | 8 cut(s) | 23, 104, 303, 340, 550, 1106, 1216, 1558 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 20, 367, 1056, 1277 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 1112 |
| HpySE526I | ACGT | 1 cut(s) | 1299 |
| HspAI | GCGC | 1 cut(s) | 1269 |
| KroI | GCCGGC | 1 cut(s) | 1023 |
| KroNI | GCCGGC | 1 cut(s) | 1025 |
| Ksp22I | TGATCA | 2 cut(s) | 1480, 1543 |
| LmnI | GCTCC | 4 cut(s) | 33, 122, 536, 728 |
| Lsp1109I | GCAGC | 2 cut(s) | 35, 1228 |
| LweI | GCATC | 2 cut(s) | 483, 865 |
| MaeI | CTAG | 3 cut(s) | 588, 899, 1392 |
| MaeII | ACGT | 1 cut(s) | 1299 |
| MaeIII | GTNAC | 3 cut(s) | 350, 602, 945 |
| MboII | GAAGA | 9 cut(s) | 33, 74, 214, 357, 610, 639, 686, 997, 1348 |
| MfeI | CAATTG | 1 cut(s) | 335 |
| MflI | RGATCY | 3 cut(s) | 463, 576, 953 |
| MhlI | GDGCHC | 4 cut(s) | 457, 533, 733, 771 |
| MlsI | TGGCCA | 1 cut(s) | 275 |
| MluCI | AATT | 8 cut(s) | 297, 335, 857, 1010, 1241, 1273, 1471, 1529 |
| MluNI | TGGCCA | 1 cut(s) | 275 |
| MlyI | GAGTC | 2 cut(s) | 414, 1357 |
| MmeI | TCCRAC | 4 cut(s) | 144, 158, 738, 783 |
| MnlI | CCTC | 9 cut(s) | 198, 341, 341, 436, 968, 1177, 1261, 1377, 1436 |
| Mox20I | TGGCCA | 1 cut(s) | 275 |
| MroNI | GCCGGC | 1 cut(s) | 1023 |
| MroXI | GAANNNNTTC | 3 cut(s) | 66, 311, 1473 |
| MscI | TGGCCA | 1 cut(s) | 275 |
| MseI | TTAA | 7 cut(s) | 92, 372, 399, 938, 1013, 1296, 1458 |
| MslI | CAYNNNNRTG | 1 cut(s) | 785 |
| Msp20I | TGGCCA | 1 cut(s) | 275 |
| MspCI | CTTAAG | 1 cut(s) | 371 |
| MspI | CCGG | 4 cut(s) | 194, 283, 493, 1024 |
| MspR9I | CCNGG | 2 cut(s) | 219, 1137 |
| MunI | CAATTG | 1 cut(s) | 335 |
| MvaI | CCWGG | 2 cut(s) | 219, 1137 |
| MvnI | CGCG | 2 cut(s) | 451, 545 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 20, 367, 1056, 1277 |
| NaeI | GCCGGC | 1 cut(s) | 1025 |
| NcoI | CCATGG | 1 cut(s) | 112 |
| NgoMIV | GCCGGC | 1 cut(s) | 1023 |
| NlaIV | GGNNCC | 5 cut(s) | 118, 314, 323, 613, 1164 |
| NmuCI | GTSAC | 3 cut(s) | 350, 602, 945 |
| NspI | RCATGY | 1 cut(s) | 946 |
| NspV | TTCGAA | 1 cut(s) | 1008 |
| PagI | TCATGA | 1 cut(s) | 1477 |
| PciI | ACATGT | 1 cut(s) | 942 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1305 |
| PdiI | GCCGGC | 1 cut(s) | 1025 |
| PdmI | GAANNNNTTC | 3 cut(s) | 66, 311, 1473 |
| PinAI | ACCGGT | 1 cut(s) | 282 |
| PkrI | GCNGC | 3 cut(s) | 25, 1093, 1218 |
| PleI | GAGTC | 2 cut(s) | 413, 1357 |
| PpsI | GAGTC | 2 cut(s) | 413, 1357 |
| PscI | ACATGT | 1 cut(s) | 942 |
| PshBI | ATTAAT | 1 cut(s) | 1458 |
| Psp124BI | GAGCTC | 1 cut(s) | 771 |
| Psp6I | CCWGG | 2 cut(s) | 217, 1135 |
| PspFI | CCCAGC | 1 cut(s) | 1046 |
| PspGI | CCWGG | 2 cut(s) | 217, 1135 |
| PspN4I | GGNNCC | 5 cut(s) | 118, 314, 323, 613, 1164 |
| PspPI | GGNCC | 3 cut(s) | 322, 443, 1121 |
| PstNI | CAGNNNCTG | 1 cut(s) | 29 |
| PsuI | RGATCY | 3 cut(s) | 463, 576, 953 |
| RsaI | GTAC | 7 cut(s) | 177, 542, 586, 705, 1144, 1180, 1196 |
| RsaNI | GTAC | 7 cut(s) | 176, 541, 585, 704, 1143, 1179, 1195 |
| RseI | CAYNNNNRTG | 1 cut(s) | 785 |
| SacI | GAGCTC | 1 cut(s) | 771 |
| SaqAI | TTAA | 7 cut(s) | 92, 372, 399, 938, 1013, 1296, 1458 |
| SatI | GCNGC | 3 cut(s) | 24, 1092, 1217 |
| Sau96I | GGNCC | 3 cut(s) | 322, 443, 1121 |
| ScaI | AGTACT | 1 cut(s) | 705 |
| SchI | GAGTC | 2 cut(s) | 414, 1357 |
| ScrFI | CCNGG | 2 cut(s) | 219, 1137 |
| SduI | GDGCHC | 4 cut(s) | 457, 533, 733, 771 |
| SfaNI | GCATC | 2 cut(s) | 483, 865 |
| SfuI | TTCGAA | 1 cut(s) | 1008 |
| SinI | GGWCC | 3 cut(s) | 322, 443, 1121 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 785 |
| SmlI | CTYRAG | 2 cut(s) | 171, 371 |
| SmoI | CTYRAG | 2 cut(s) | 171, 371 |
| Sse9I | AATT | 8 cut(s) | 297, 335, 857, 1010, 1241, 1273, 1471, 1529 |
| SsiI | CCGC | 8 cut(s) | 57, 451, 545, 927, 1068, 1091, 1238, 1280 |
| SspMI | CTAG | 3 cut(s) | 588, 899, 1392 |
| SstI | GAGCTC | 1 cut(s) | 771 |
| StyD4I | CCNGG | 2 cut(s) | 217, 1135 |
| StyI | CCWWGG | 2 cut(s) | 112, 694 |
| TaaI | ACNGT | 6 cut(s) | 443, 608, 764, 1031, 1260, 1423 |
| TaiI | ACGT | 1 cut(s) | 1302 |
| TaqI | TCGA | 3 cut(s) | 147, 1008, 1308 |
| TasI | AATT | 8 cut(s) | 297, 335, 857, 1010, 1241, 1273, 1471, 1529 |
| TatI | WGTACW | 3 cut(s) | 175, 703, 1142 |
| TauI | GCSGC | 1 cut(s) | 1094 |
| Tru1I | TTAA | 7 cut(s) | 92, 372, 399, 938, 1013, 1296, 1458 |
| Tru9I | TTAA | 7 cut(s) | 92, 372, 399, 938, 1013, 1296, 1458 |
| TscAI | CASTG | 3 cut(s) | 172, 394, 769 |
| TseFI | GTSAC | 3 cut(s) | 350, 602, 945 |
| TseI | GCWGC | 2 cut(s) | 23, 1216 |
| Tsp45I | GTSAC | 3 cut(s) | 350, 602, 945 |
| TspDTI | ATGAA | 7 cut(s) | 628, 809, 851, 963, 1217, 1365, 1466 |
| TspRI | CASTG | 3 cut(s) | 172, 394, 769 |
| Vha464I | CTTAAG | 1 cut(s) | 371 |
| VpaK11BI | GGWCC | 3 cut(s) | 322, 443, 1121 |
| VspI | ATTAAT | 1 cut(s) | 1458 |
| XapI | RAATTY | 3 cut(s) | 297, 1471, 1529 |
| XceI | RCATGY | 1 cut(s) | 946 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 721, 1156 |
| XmnI | GAANNNNTTC | 3 cut(s) | 66, 311, 1473 |
| XspI | CTAG | 3 cut(s) | 588, 899, 1392 |
| ZrmI | AGTACT | 1 cut(s) | 705 |