Rw3G005190

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0014758
Physical Location & Seq
Forward (+)
4348437 .. 4352085
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G005190.1

Sequence Viewer

Length: 1566 bp
ATGTCAACTATCACAGGTAGTGGTGTTAGGAGCTTCTCTTCAGGAAATACTACCAGTGCTGAAGAAGTGCTTCAACAACAGCAACAACAAGAGCTACTAAATCACTTCCATGGCTCCAATTCTCTTCAGGAAATTACAATCAATGGTAATTCTGCAACTCAACAACAGCAACCTCCACCAGCCAAGAAGAAAAGAAACCTACCAGGAACTCCAGATCCAAGTGCTGAAGTGATAGCCTTGTCACCAAAGACCCTGATGGCAACAAACCGATTCGTGTGCGAAATTTGCAAGAAAGGGTTCCAAAGGGACCAAAACCTCCAATTGCACCGAAGAGGCCACAACTTGCCATGGAAGCTTAAGCAAAGATCAAGCACCGAAATCCGGAAGCGGGTCTACATCTGCCCCGAACCCTCATGCGTCCACCATGAACCCTCCCGGGCACTGGGAGATCTCACGGGGATCAAGAAGCACTTTTGCCGGAAGCACGGTGAAAAAAAGTGGAAATGTGACAAGTGCTCGAAGAAGTATGCAGTGCAATCGGACTGGAAAGCTCATTCTAAGACCTGTGGTACTAGAGAATACAAATGTGACTGTGGAACCGTCTTCTCCAGAAGAGATAGCTTTATCACCCACAGAGCTTTCTGTGATGCCATAGCTGAAGAAAACAAGACACCAGTTCAAGGACAAGGAGTACTAATGTCCAACAACATGGGACAACAGAACTTACAACAAGGCGGCCAACTAGTTTCCGGCGGCGAGCTCATGATCCCGGCCTCAATACCGATGAGTAACACCGAAACAGCTGCCACCATCCCATCAACAAGAAGTAGCAATACATCTGATCACTTTGATCATTTCGACACCAAAAATCCTAATTTAACCCTACTGCCCCAAGGAGTACCAGCAAACATGTTGCCATCATCCAGATGCGGCCTGAACAACAATTCATTGTCATCACCAACAAGTAGTGCACTGTTTCATAATCACCACGGGCACCAAGTACTCCCCAGCTCAATCTCCGGCCACTTGTCCGCCACCGAGTTGCTGCAGAAAGCAGCTCAAATGGGTGCAACAATGAGCAGCAATAATTCTAGTGGTATGAGCATGGCACCCTCAACATATGGTGACTTTCCTAGCTACGTGAATAACCAGTTCATGCAGCACAAAGATGGTAACAGTATTCCGGTACAAGAGACCTCCTCGCAGTTTTATGGTGCTAGTAATGGGAATATGGGAATGTTCAGTGGGCTATTATTTGATCAGAGCAATGGGGTGTTGATGAAGAACATGGAGCAAAGCGTTAATGGCAGGAATAATAATAATAATAATAACAATACTAGTAATGGTTTCAGCTTGCATGGTAAAAATGTGAGTAGAGGAGGAGATACGATGACCGTGGACTTTCTGGGGATTGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGTAATAGATCAGAAACTTTTCATGATCATCAACAAAGACAAGTACTACATGATGAGCATCAGCGACAAAACAAGCAGGAAGATGATGATCAATTAATGGGGTTTGGTTGGAGCTGGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz

Protein Analysis

521

Amino Acids

57.18

Weight (kDa)

8.99

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 128 - 162 4.2e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 166 - 190 2.7e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 193 - 224 3.9e-22 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014758)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g06270 FvH4_6g06270
malus_domestica MD04G1203000.v1.1 MD12G1216800.v1.1
prunus_persica Prupe.6G323100_v2.0.a1
pyrus_communis pycom04g17930 pycom12g20230
rosa_chinensis RchiOBHm_Chr3g0455311
rosa_laevigata RLG00000025371
rosa_roxburghii Rroxscaffold_6G00424390
rosa_rugosa Rorug03G0006000 Rorug03G0006100
rosa_samantha Rh3AG065900 Rh3BG068000 Rh3CG066400 Rh3DG068000
rosa_wichuraiana Rw3G005190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 993, 1108
AccI GTMKAC 1 cut(s) 393
AccIII TCCGGA 1 cut(s) 381
AciI CCGC 5 cut(s) 388, 735, 753, 930, 1032
AclWI GGATC 3 cut(s) 209, 467, 760
AcoI YGGCCR 2 cut(s) 736, 1021
AcsI RAATTY 1 cut(s) 282
AcuI CTGAAG 5 cut(s) 24, 81, 110, 246, 678
AfaI GTAC 6 cut(s) 571, 693, 900, 1002, 1188, 1488
AfiI CCNNNNNNNGG 4 cut(s) 381, 388, 442, 680
AflII CTTAAG 1 cut(s) 356
AflIII ACRYGT 1 cut(s) 909
AgsI TTSAA 2 cut(s) 74, 680
AhlI ACTAGT 2 cut(s) 742, 1337
AjnI CCWGG 1 cut(s) 202
AloI GAACNNNNNNTCC 2 cut(s) 199, 231
Alw21I GWGCWC 3 cut(s) 518, 762, 973
Alw26I GTCTC 1 cut(s) 1187
Alw44I GTGCAC 1 cut(s) 969
AlwI GGATC 3 cut(s) 209, 467, 760
Ama87I CYCGRG 1 cut(s) 435
Aor13HI TCCGGA 1 cut(s) 381
AoxI GGCC 5 cut(s) 334, 736, 771, 931, 1021
ApaLI GTGCAC 1 cut(s) 969
ApeKI GCWGC 5 cut(s) 803, 1045, 1055, 1080, 1159
ApoI RAATTY 1 cut(s) 282
AseI ATTAAT 1 cut(s) 1538
Asp700I GAANNNNTTC 3 cut(s) 69, 296, 1461
AspS9I GGNCC 1 cut(s) 307
AsuC2I CCSGG 3 cut(s) 436, 437, 770
AsuHPI GGTGA 6 cut(s) 234, 500, 619, 948, 977, 1136
AvaI CYCGRG 1 cut(s) 435
AvaII GGWCC 1 cut(s) 307
BaeGI GKGCMC 3 cut(s) 442, 973, 996
BanI GGYRCC 2 cut(s) 993, 1108
BanII GRGCYC 1 cut(s) 762
BarI GAAGNNNNNNTAC 4 cut(s) 377, 409, 817, 849
BbsI GAAGAC 1 cut(s) 595
Bbv12I GWGCWC 3 cut(s) 518, 762, 973
BbvI GCAGC 5 cut(s) 790, 1032, 1067, 1092, 1171
BccI CCATC 5 cut(s) 250, 818, 823, 925, 1163
BcgI CGANNNNNNTGC 6 cut(s) 258, 292, 519, 553, 785, 819
BciT130I CCWGG 1 cut(s) 204
BclI TGATCA 5 cut(s) 841, 850, 1258, 1468, 1531
BcnI CCSGG 3 cut(s) 436, 437, 770
BcoDI GTCTC 1 cut(s) 1187
BcuI ACTAGT 2 cut(s) 742, 1337
BfaI CTAG 6 cut(s) 573, 743, 1092, 1134, 1218, 1338
BfmI CTRYAG 1 cut(s) 1046
BfrI CTTAAG 1 cut(s) 356
BglII AGATCT 1 cut(s) 448
BisI GCNGC 8 cut(s) 736, 754, 804, 931, 1046, 1056, 1081, 1160
BlsI GCNGC 8 cut(s) 737, 755, 805, 932, 1047, 1057, 1082, 1161
BmcAI AGTACT 3 cut(s) 693, 1002, 1488
Bme1390I CCNGG 4 cut(s) 204, 436, 437, 770
Bme18I GGWCC 1 cut(s) 307
BmeT110I CYCGRG 1 cut(s) 435
BmgT120I GGNCC 1 cut(s) 307
BmiI GGNNCC 6 cut(s) 115, 299, 308, 598, 995, 1110
BmrFI CCNGG 4 cut(s) 204, 436, 437, 770
BmrI ACTGGG 1 cut(s) 452
BmsI GCATC 3 cut(s) 637, 917, 1510
BmuI ACTGGG 1 cut(s) 452
BpiI GAAGAC 1 cut(s) 595
BplI GAGNNNNNCTC 2 cut(s) 1184, 1216
BpmI CTGGAG 2 cut(s) 195, 592
BpuMI CCSGG 3 cut(s) 436, 437, 770
BsaAI YACGTR 1 cut(s) 1141
BsaBI GATNNNNATC 2 cut(s) 1500, 1530
BsaI GGTCTC 1 cut(s) 1187
BsaJI CCNNGG 6 cut(s) 109, 347, 435, 892, 988, 1395
BsaWI WCCGGW 2 cut(s) 381, 1183
BsaXI ACNNNNNCTCC 1 cut(s) 1546
Bsc4I CCNNNNNNNGG 4 cut(s) 381, 388, 442, 680
Bse1I ACTGG 5 cut(s) 54, 447, 548, 674, 1150
Bse3DI GCAATG 1 cut(s) 1273
Bse8I GATNNNNATC 2 cut(s) 1500, 1530
BseAI TCCGGA 1 cut(s) 381
BseBI CCWGG 1 cut(s) 204
BseDI CCNNGG 6 cut(s) 109, 347, 435, 892, 988, 1395
BseGI GGATG 2 cut(s) 810, 920
BseJI GATNNNNATC 2 cut(s) 1500, 1530
BseLI CCNNNNNNNGG 4 cut(s) 381, 388, 442, 680
BseMI GCAATG 1 cut(s) 1273
BseNI ACTGG 5 cut(s) 54, 447, 548, 674, 1150
BseRI GAGGAG 9 cut(s) 1189, 1392, 1395, 1440, 1443, 1446, 1449, 1452, 1455
BseSI GKGCMC 3 cut(s) 442, 973, 996
BseXI GCAGC 5 cut(s) 790, 1032, 1067, 1092, 1171
BseYI CCCAGC 1 cut(s) 1007
BshFI GGCC 5 cut(s) 336, 738, 773, 933, 1023
BshNI GGYRCC 2 cut(s) 993, 1108
BsiHKAI GWGCWC 3 cut(s) 518, 762, 973
BsiHKCI CYCGRG 1 cut(s) 435
BsiSI CCGG 7 cut(s) 382, 436, 478, 750, 770, 1020, 1184
BslFI GGGAC 2 cut(s) 320, 726
BslI CCNNNNNNNGG 4 cut(s) 381, 388, 442, 680
BsmAI GTCTC 1 cut(s) 1187
BsmFI GGGAC 2 cut(s) 320, 726
BsnI GGCC 5 cut(s) 336, 738, 773, 933, 1023
Bso31I GGTCTC 1 cut(s) 1187
BsoBI CYCGRG 1 cut(s) 435
Bsp1286I GDGCHC 5 cut(s) 442, 518, 762, 973, 996
Bsp13I TCCGGA 1 cut(s) 381
Bsp19I CCATGG 2 cut(s) 109, 347
BspACI CCGC 5 cut(s) 388, 735, 753, 930, 1032
BspANI GGCC 5 cut(s) 336, 738, 773, 933, 1023
BspEI TCCGGA 1 cut(s) 381
BspHI TCATGA 2 cut(s) 762, 1465
BspLI GGNNCC 6 cut(s) 115, 299, 308, 598, 995, 1110
BspMAI CTGCAG 1 cut(s) 1050
BspPI GGATC 3 cut(s) 209, 467, 760
BspT107I GGYRCC 2 cut(s) 993, 1108
BspTI CTTAAG 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 1187
BsrDI GCAATG 1 cut(s) 1273
BsrI ACTGG 5 cut(s) 54, 447, 548, 674, 1150
BssECI CCNNGG 6 cut(s) 109, 347, 435, 892, 988, 1395
BssT1I CCWWGG 3 cut(s) 109, 347, 892
Bst2UI CCWGG 1 cut(s) 204
Bst4CI ACNGT 6 cut(s) 488, 593, 601, 975, 1178, 1396
Bst6I CTCTTC 6 cut(s) 43, 129, 325, 607, 1411, 1417
BstAFI CTTAAG 1 cut(s) 356
BstBAI YACGTR 1 cut(s) 1141
BstC8I GCNNGC 2 cut(s) 758, 1355
BstDEI CTNAG 1 cut(s) 558
BstDSI CCRYGG 4 cut(s) 109, 347, 988, 1395
BstF5I GGATG 2 cut(s) 810, 920
BstMAI GTCTC 1 cut(s) 1187
BstMWI GCNNNNNNNGC 3 cut(s) 285, 352, 1305
BstNI CCWGG 1 cut(s) 204
BstNSI RCATGY 1 cut(s) 913
BstSCI CCNGG 4 cut(s) 202, 434, 435, 768
BstSFI CTRYAG 1 cut(s) 1046
BstSLI GKGCMC 3 cut(s) 442, 973, 996
BstV1I GCAGC 5 cut(s) 790, 1032, 1067, 1092, 1171
BstV2I GAAGAC 1 cut(s) 595
BstX2I RGATCY 2 cut(s) 214, 448
BstXI CCANNNNNNTGG 1 cut(s) 709
BstYI RGATCY 2 cut(s) 214, 448
BsuRI GGCC 5 cut(s) 336, 738, 773, 933, 1023
BtgI CCRYGG 4 cut(s) 109, 347, 988, 1395
BtsCI GGATG 2 cut(s) 810, 920
BtsI GCAGTG 1 cut(s) 537
BtsIMutI CAGTG 5 cut(s) 61, 440, 537, 971, 1249
Cac8I GCNNGC 2 cut(s) 758, 1355
CciI TCATGA 2 cut(s) 762, 1465
Cfr13I GGNCC 1 cut(s) 307
Cfr9I CCCGGG 1 cut(s) 435
CseI GACGC 1 cut(s) 406
Csp6I GTAC 6 cut(s) 570, 692, 899, 1001, 1187, 1487
CviQI GTAC 6 cut(s) 570, 692, 899, 1001, 1187, 1487
DdeI CTNAG 1 cut(s) 558
EaeI YGGCCR 2 cut(s) 736, 1021
Eam1104I CTCTTC 6 cut(s) 43, 129, 325, 607, 1411, 1417
EarI CTCTTC 6 cut(s) 43, 129, 325, 607, 1411, 1417
EciI GGCGGA 1 cut(s) 1021
Ecl136II GAGCTC 1 cut(s) 760
Eco130I CCWWGG 3 cut(s) 109, 347, 892
Eco24I GRGCYC 1 cut(s) 762
Eco31I GGTCTC 1 cut(s) 1187
Eco47I GGWCC 1 cut(s) 307
Eco53kI GAGCTC 1 cut(s) 760
Eco57I CTGAAG 5 cut(s) 24, 81, 110, 246, 678
Eco88I CYCGRG 1 cut(s) 435
EcoICRI GAGCTC 1 cut(s) 760
EcoRII CCWGG 1 cut(s) 202
EcoT14I CCWWGG 3 cut(s) 109, 347, 892
EcoT38I GRGCYC 1 cut(s) 762
ErhI CCWWGG 3 cut(s) 109, 347, 892
FalI AAGNNNNNCTT 4 cut(s) 54, 86, 455, 487
FaqI GGGAC 2 cut(s) 320, 726
FauI CCCGC 1 cut(s) 381
FauNDI CATATG 1 cut(s) 1120
FbaI TGATCA 5 cut(s) 841, 850, 1258, 1468, 1531
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 8 cut(s) 736, 754, 804, 931, 1046, 1056, 1081, 1160
FokI GGATG 2 cut(s) 797, 907
FriOI GRGCYC 1 cut(s) 762
Fsp4HI GCNGC 8 cut(s) 736, 754, 804, 931, 1046, 1056, 1081, 1160
FspBI CTAG 6 cut(s) 573, 743, 1092, 1134, 1218, 1338
GluI GCNGC 8 cut(s) 736, 754, 804, 931, 1046, 1056, 1081, 1160
GsaI CCCAGC 1 cut(s) 1011
GsuI CTGGAG 2 cut(s) 195, 592
HaeIII GGCC 5 cut(s) 336, 738, 773, 933, 1023
HapII CCGG 7 cut(s) 382, 436, 478, 750, 770, 1020, 1184
HgaI GACGC 1 cut(s) 406
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 1 cut(s) 270
HpaII CCGG 7 cut(s) 382, 436, 478, 750, 770, 1020, 1184
HphI GGTGA 6 cut(s) 234, 500, 619, 948, 977, 1136
Hpy166II GTNNAC 5 cut(s) 6, 394, 421, 971, 1399
Hpy188I TCNGA 4 cut(s) 541, 841, 1263, 1456
Hpy188III TCNNGA 9 cut(s) 42, 128, 212, 382, 463, 609, 763, 924, 1466
Hpy8I GTNNAC 5 cut(s) 6, 394, 421, 971, 1399
HpyCH4III ACNGT 6 cut(s) 488, 593, 601, 975, 1178, 1396
HpyCH4IV ACGT 1 cut(s) 1140
HpyF10VI GCNNNNNNNGC 3 cut(s) 285, 352, 1305
HpyF3I CTNAG 1 cut(s) 558
HpySE526I ACGT 1 cut(s) 1140
Kpn2I TCCGGA 1 cut(s) 381
Ksp22I TGATCA 5 cut(s) 841, 850, 1258, 1468, 1531
LmnI GCTCC 4 cut(s) 30, 119, 1291, 1554
Lsp1109I GCAGC 5 cut(s) 790, 1032, 1067, 1092, 1171
LweI GCATC 3 cut(s) 637, 917, 1510
MaeI CTAG 6 cut(s) 573, 743, 1092, 1134, 1218, 1338
MaeII ACGT 1 cut(s) 1140
MaeIII GTNAC 6 cut(s) 240, 506, 587, 788, 1124, 1172
MfeI CAATTG 1 cut(s) 320
MflI RGATCY 2 cut(s) 214, 448
MhlI GDGCHC 5 cut(s) 442, 518, 762, 973, 996
MluCI AATT 9 cut(s) 118, 132, 148, 282, 320, 874, 943, 1087, 1535
MmeI TCCRAC 2 cut(s) 726, 1532
MroI TCCGGA 1 cut(s) 381
MroXI GAANNNNTTC 3 cut(s) 69, 296, 1461
MseI TTAA 4 cut(s) 357, 878, 1302, 1538
MslI CAYNNNNRTG 3 cut(s) 108, 925, 1167
MspA1I CMGCKG 1 cut(s) 803
MspCI CTTAAG 1 cut(s) 356
MspI CCGG 7 cut(s) 382, 436, 478, 750, 770, 1020, 1184
MspR9I CCNGG 4 cut(s) 204, 436, 437, 770
MunI CAATTG 1 cut(s) 320
MvaI CCWGG 1 cut(s) 204
MwoI GCNNNNNNNGC 3 cut(s) 285, 352, 1305
NciI CCSGG 3 cut(s) 436, 437, 770
NcoI CCATGG 2 cut(s) 109, 347
NdeI CATATG 1 cut(s) 1120
NlaIV GGNNCC 6 cut(s) 115, 299, 308, 598, 995, 1110
NmuCI GTSAC 4 cut(s) 240, 506, 587, 1124
NspI RCATGY 1 cut(s) 913
PagI TCATGA 2 cut(s) 762, 1465
PciI ACATGT 1 cut(s) 909
PdmI GAANNNNTTC 3 cut(s) 69, 296, 1461
PfeI GAWTC 1 cut(s) 270
PkrI GCNGC 8 cut(s) 737, 755, 805, 932, 1047, 1057, 1082, 1161
Ppu21I YACGTR 1 cut(s) 1141
PscI ACATGT 1 cut(s) 909
PshBI ATTAAT 1 cut(s) 1538
Psp124BI GAGCTC 1 cut(s) 762
Psp6I CCWGG 1 cut(s) 202
PspFI CCCAGC 1 cut(s) 1007
PspGI CCWGG 1 cut(s) 202
PspN4I GGNNCC 6 cut(s) 115, 299, 308, 598, 995, 1110
PspPI GGNCC 1 cut(s) 307
PstI CTGCAG 1 cut(s) 1050
PsuI RGATCY 2 cut(s) 214, 448
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 6 cut(s) 571, 693, 900, 1002, 1188, 1488
RsaNI GTAC 6 cut(s) 570, 692, 899, 1001, 1187, 1487
RseI CAYNNNNRTG 3 cut(s) 108, 925, 1167
SacI GAGCTC 1 cut(s) 762
SaqAI TTAA 4 cut(s) 357, 878, 1302, 1538
SatI GCNGC 8 cut(s) 736, 754, 804, 931, 1046, 1056, 1081, 1160
Sau96I GGNCC 1 cut(s) 307
ScaI AGTACT 3 cut(s) 693, 1002, 1488
ScrFI CCNGG 4 cut(s) 204, 436, 437, 770
SduI GDGCHC 5 cut(s) 442, 518, 762, 973, 996
SfaNI GCATC 3 cut(s) 637, 917, 1510
SfcI CTRYAG 1 cut(s) 1046
SinI GGWCC 1 cut(s) 307
SmaI CCCGGG 1 cut(s) 437
SmiMI CAYNNNNRTG 3 cut(s) 108, 925, 1167
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
SpeI ACTAGT 2 cut(s) 742, 1337
Sse9I AATT 9 cut(s) 118, 132, 148, 282, 320, 874, 943, 1087, 1535
SsiI CCGC 5 cut(s) 388, 735, 753, 930, 1032
SspMI CTAG 6 cut(s) 573, 743, 1092, 1134, 1218, 1338
SstI GAGCTC 1 cut(s) 762
StyD4I CCNGG 4 cut(s) 202, 434, 435, 768
StyI CCWWGG 3 cut(s) 109, 347, 892
TaaI ACNGT 6 cut(s) 488, 593, 601, 975, 1178, 1396
TaiI ACGT 1 cut(s) 1143
TaqI TCGA 2 cut(s) 518, 858
TasI AATT 9 cut(s) 118, 132, 148, 282, 320, 874, 943, 1087, 1535
TatI WGTACW 3 cut(s) 691, 1000, 1486
TauI GCSGC 3 cut(s) 738, 756, 933
TfiI GAWTC 1 cut(s) 270
Tru1I TTAA 4 cut(s) 357, 878, 1302, 1538
Tru9I TTAA 4 cut(s) 357, 878, 1302, 1538
TscAI CASTG 5 cut(s) 61, 447, 537, 978, 1249
TseFI GTSAC 4 cut(s) 240, 506, 587, 1124
TseI GCWGC 5 cut(s) 803, 1045, 1055, 1080, 1159
Tsp45I GTSAC 4 cut(s) 240, 506, 587, 1124
TspDTI ATGAA 6 cut(s) 441, 936, 968, 1144, 1295, 1454
TspMI CCCGGG 1 cut(s) 435
TspRI CASTG 5 cut(s) 61, 447, 537, 978, 1249
Vha464I CTTAAG 1 cut(s) 356
VneI GTGCAC 1 cut(s) 969
VpaK11BI GGWCC 1 cut(s) 307
VspI ATTAAT 1 cut(s) 1538
XapI RAATTY 1 cut(s) 282
XceI RCATGY 1 cut(s) 913
XmaI CCCGGG 1 cut(s) 435
XmiI GTMKAC 1 cut(s) 393
XmnI GAANNNNTTC 3 cut(s) 69, 296, 1461
XspI CTAG 6 cut(s) 573, 743, 1092, 1134, 1218, 1338
ZrmI AGTACT 3 cut(s) 693, 1002, 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.