Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0010675

Physical Location & Seq

Genomic Coordinates Reverse (-)

32226887 .. 32231474

Gene Structure 4588 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1247700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGGTTCCATGAACTGGTTGGGTTTCTCTCTTTCCCCTCAAGAAGTAGTTCCGGCTGATCCAACGATATCTGAGGGTACTGATCATCGTCATCAGCAGCACGGCCAAGATCATCAGGACTTATCTGACCAGACACTAGTCTCTCGCCTCCGCTCTAAGTACTCGGATGAAATCTCCGGTACCGATGCCTCCGGAGACTGCTTTGATCTCACTAATTCTCATGACGACTCATCTGCTACTCCTACTGCTCCTAATCATCATTCTCTCAACCACCTCCCTACATCTTTTGGGATGCTTCATCAAGCTGCGTTCGACTCCCAAGGTGCAGATTGGAATATGAACTCACCGGATAGCACCAACTACAAGTTCACATCAGACCACCTCTCTATGCTTAACTCATGCAATACCCTAAACCTTGAAAACCATCAAAATCGTCATCAGCAGCAGCCAAAGCTCGAAAACTTCCTGGGCCGACACTCTTTCATTGCGGATCATCCAGATCATATCCAGAGTAGCACTAGTTCTGCGCATGCATACAATAGTAAAAACACCGCCAGTATTAATACTACCGACAACATCTTCACCAGAACCGTCTCTTCTTTGCAGCTTCCGTTAGAGATTTCCGATCCCACAAATGTCATCAACGGAGACGGTGCAGTCGGTAACATTAATATCAACAGCAGCACCTCGAATATTGGGCTTTCAATGATCAAGACATGGCTGAGGAATCAACCGGCATCCCAGCTGCAAGAGATGAACAAGAACGATGTCAATGGCATCGGTGTCTCCAACACAAGTACTAGTACTAGCAGTGCACAGACTCTTTCGCTTTCAATGAGTACTGCAGGTGCTACTACGGCCGGAGATCAAACCTGTTCGTCAGATCGAGATCGAGATAGTAATAAGCAGGCAATTATTAGGACCGCTGCCCCCGCAGCAACTATTCAGTCTGGGATCGATAACCAGACTAGTATTGCTACTGCTATTGAGGCCGTGCCCAGAAAGTCCATTGATACATTTGGACAGAGAACTTCTATATACCGTGGTGTAACCAGGCACAGATGGACAGGTAGATATGAAGCTCATTTGTGGGATAATAGTTGCCGAAGAGAGGGACAAACTCGAAAGGGACGGCAAGTTTATCTGGGTGGTTATGACAAGGAAGAAAAGGCCGCAAGAGCTTATGACCTAGCAGCATTGAAATATTGGGGTACTACAACCACTACCAACTTCCCGATTAGCAACTATGAGAAAGAGGTAGACGAAATGAAGCACATGACAAGACAGGAATATGTTGCATCTTTGCGAAGGAAGAGTAGTGGGTTTTCTCGTGGTGCATCCATTTATCGAGGAGTGACAAGGCACCACCAGCATGGGAGATGGCAAGCAAGGATTGGAAGAGTAGCAGGGAACAAAGATCTCTACCTGGGAACATTCAGTACCCAGGAGGAAGCAGCAGAGGCATATGACATCGCAGCCATAAAATTCCGGGGACTTAATGCAGTAACTAACTTTGACATGACTAGATACGACGTGAAGTCCATTCTGGAGAGCAGCACATTGCCCATTGGTGGTGCTGCGAAGCGACTGAAAGACGTTGAGCAGGCACATCACCAGCATCTGCACGAGATGACTCTACTGGCCGACGGACACAACAGATCAACGATGGATGATCAACGCGAAAAGCTGATGATGATGAATACTAGTAGTAATAGTCTCGATCAATATCATCAGCAACTGATAAATGGAGATCATCATGGAATGAGAATAAATAACGTCTATGGTACTGGAGCAGGCTGGCCAACTCTTGCATTTAACCAAGCCGCTACCGCTGTTGCCCATCAGGCCGCAGTGCCGCCCTTTGGGATGCATTATTACTCATCAGTGCCATATAATTCTAATGGCGGGCAGAGGGTTTGGTGCAAGCAAGAGCAAGACACTAATTCTCAAAGCTTTTATCAGCCACAAGATCATCATCGTCAAGATCTTCATCATCATCAACTACTTCAGTTGGGAAGTACTCACAATTTCTTTCAGCCAGTCAACCTCATGGGAAATAGTACTACGGATTCTATGGAACATAGCTCAGGTTCTAATTCTGTCATATATAATGGTACTACTGCCGGAGATCACGGTGGCTATATAATCCCTATGGGGACGGCTATAGCTAATGATCATGAGAATAATAGTAATGCTTTTGGAAATGGCAGTTCCGATCATGATCAGGTGAAGCCGGCGCTAGGTTATGAAAATGCGTTTGGCTCAAGTAGTACTACTACCACTGTGGATGCTTATAATCATGCAAAGAGCTTGTATTATCTTCCGGTTCAGGCGCCACAGTCATCATCAGTTTCTTCAATAGGTGTGTCGACGAAGGGAAGCAGCGAGTATGACAATTGGGTGCCAACAGCAGTTCCAACATCTACTCACAATATGGCTCCTTTCACAGTCTGGAATGACACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

822

Amino Acids

90.39

Weight (kDa)

6.21

Isoelectric Point (pI)

40.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	347 - 404	5.8e-11	AP2 domain
AP2	PF00847	449 - 498	1.1e-08	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17430 AT5G17430
fragaria_vesca	FvH4_6g00160 FvH4_6g00160
malus_domestica	MD04G1247700.v1.1
prunus_persica	Prupe.6G364100_v2.0.a1
pyrus_communis	pycom12g24110
rosa_chinensis	RchiOBHm_Chr3g0447531
rosa_laevigata	RLG00000025991
rosa_multiflora	Rmu_co8415981.1_g000001 Rmu_sc0003550.1_g000011 Rmu_sc0006572.1_g000001 Rmu_sc0037294.1_g000005
rosa_roxburghii	Rroxscaffold_6G00425750
rosa_rugosa	Rorug02G0602600
rosa_samantha	Rh3AG002900 Rh3BG002400 Rh3CG002700 Rh3DG002800
rosa_wichuraiana	Rw3G000180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2295
AarI	CACCTGC	1 cut(s)	836
AasI	GACNNNNNNGTC	1 cut(s)	656
Acc16I	TGCGCA	1 cut(s)	528
Acc36I	ACCTGC	1 cut(s)	836
Acc65I	GGTACC	1 cut(s)	179
AccB1I	GGYRCC	4 cut(s)	179, 1362, 2332, 2401
AccB7I	CCANNNNNTGG	1 cut(s)	15
AccBSI	CCGCTC	1 cut(s)	153
AccI	GTMKAC	2 cut(s)	1260, 2369
AccII	CGCG	1 cut(s)	1680
AccIII	TCCGGA	1 cut(s)	191
AclWI	GGATC	4 cut(s)	53, 498, 620, 962
AcoI	YGGCCR	4 cut(s)	103, 858, 1641, 1799
AcsI	RAATTY	1 cut(s)	1484
AcuI	CTGAAG	1 cut(s)	1991
AcyI	GRCGYC	1 cut(s)	2333
AfiI	CCNNNNNNNGG	5 cut(s)	15, 1111, 1571, 1862, 2240
AgsI	TTSAA	5 cut(s)	419, 705, 834, 1201, 2358
AhdI	GACNNNNNGTC	1 cut(s)	1537
AhlI	ACTAGT	5 cut(s)	136, 518, 800, 968, 1703
AjiI	CACGTC	1 cut(s)	1534
AjnI	CCWGG	4 cut(s)	465, 1052, 1425, 1443
AjuI	GAANNNNNNNTTGG	4 cut(s)	350, 382, 2241, 2273
Alw21I	GWGCWC	1 cut(s)	817
Alw26I	GTCTC	6 cut(s)	145, 189, 598, 642, 790, 1721
Alw44I	GTGCAC	1 cut(s)	813
AlwI	GGATC	4 cut(s)	53, 498, 620, 962
AlwNI	CAGNNNCTG	2 cut(s)	1621, 1738
Aor13HI	TCCGGA	1 cut(s)	191
AoxI	GGCC	8 cut(s)	103, 469, 858, 990, 1170, 1641, 1799, 1845
ApaLI	GTGCAC	1 cut(s)	813
ApoI	RAATTY	1 cut(s)	1484
AseI	ATTAAT	2 cut(s)	561, 669
Asp700I	GAANNNNTTC	1 cut(s)	48
Asp718I	GGTACC	1 cut(s)	179
AspLEI	GCGC	3 cut(s)	529, 2239, 2335
AspS9I	GGNCC	2 cut(s)	469, 921
AsuC2I	CCSGG	1 cut(s)	1490
AsuHPI	GGTGA	4 cut(s)	336, 574, 1604, 2239
AvaII	GGWCC	1 cut(s)	921
BaeGI	GKGCMC	2 cut(s)	817, 999
BalI	TGGCCA	1 cut(s)	1801
BanI	GGYRCC	4 cut(s)	179, 1362, 2332, 2401
BauI	CACGAG	2 cut(s)	1329, 1625
Bbv12I	GWGCWC	1 cut(s)	817
BbvCI	CCTCAGC	1 cut(s)	722
BccI	CCATC	5 cut(s)	432, 1056, 1374, 1660, 1848
BceAI	ACGGC	5 cut(s)	118, 873, 977, 1148, 2175
BcgI	CGANNNNNNTGC	2 cut(s)	215, 249
BciT130I	CCWGG	4 cut(s)	467, 1054, 1427, 1445
BclI	TGATCA	5 cut(s)	82, 708, 1672, 2173, 2221
BcnI	CCSGG	1 cut(s)	1490
BcoDI	GTCTC	6 cut(s)	145, 189, 598, 642, 790, 1721
BcuI	ACTAGT	5 cut(s)	136, 518, 800, 968, 1703
BfaI	CTAG	9 cut(s)	137, 519, 801, 807, 969, 1190, 1524, 1704, 2240
BfmI	CTRYAG	2 cut(s)	843, 2163
BfoI	RGCGCY	2 cut(s)	2240, 2336
BfuAI	ACCTGC	1 cut(s)	836
BglI	GCCNNNNNGGC	1 cut(s)	1844
BglII	AGATCT	2 cut(s)	1417, 1984
BmcAI	AGTACT	7 cut(s)	161, 799, 805, 841, 2020, 2062, 2272
Bme1390I	CCNGG	5 cut(s)	467, 1054, 1427, 1445, 1490
Bme18I	GGWCC	1 cut(s)	921
BmeRI	GACNNNNNGTC	1 cut(s)	1537
BmgBI	CACGTC	1 cut(s)	1534
BmgT120I	GGNCC	2 cut(s)	469, 921
BmiI	GGNNCC	6 cut(s)	7, 181, 1364, 2334, 2403, 2439
BmrFI	CCNGG	5 cut(s)	467, 1054, 1427, 1445, 1490
BmsI	GCATC	9 cut(s)	175, 282, 746, 786, 1307, 1346, 1627, 1857, 2278
BoxI	GACNNNNGTC	1 cut(s)	137
BpmI	CTGGAG	2 cut(s)	1568, 1809
Bpu10I	CCTNAGC	2 cut(s)	722, 2086
BpuEI	CTTGAG	2 cut(s)	24, 2248
BpuMI	CCSGG	1 cut(s)	1490
Bsa29I	ATCGAT	1 cut(s)	957
BsaBI	GATNNNNATC	5 cut(s)	888, 1725, 1974, 1989, 2220
BsaHI	GRCGYC	1 cut(s)	2333
BsaJI	CCNNGG	6 cut(s)	319, 466, 1042, 1426, 1443, 1489
BsaWI	WCCGGW	4 cut(s)	176, 191, 346, 2323
Bsc4I	CCNNNNNNNGG	5 cut(s)	15, 1111, 1571, 1862, 2240
Bse118I	RCCGGY	2 cut(s)	733, 2233
Bse1I	ACTGG	5 cut(s)	20, 555, 1644, 1792, 2039
Bse3DI	GCAATG	2 cut(s)	483, 1559
Bse8I	GATNNNNATC	5 cut(s)	888, 1725, 1974, 1989, 2220
BseAI	TCCGGA	1 cut(s)	191
BseBI	CCWGG	4 cut(s)	467, 1054, 1427, 1445
BseCI	ATCGAT	1 cut(s)	957
BseDI	CCNNGG	6 cut(s)	319, 466, 1042, 1426, 1443, 1489
BseGI	GGATG	8 cut(s)	172, 297, 493, 737, 1337, 1675, 1872, 2293
BseJI	GATNNNNATC	5 cut(s)	888, 1725, 1974, 1989, 2220
BseLI	CCNNNNNNNGG	5 cut(s)	15, 1111, 1571, 1862, 2240
BseMI	GCAATG	2 cut(s)	483, 1559
BseMII	CTCAG	3 cut(s)	63, 713, 2100
BseNI	ACTGG	5 cut(s)	20, 555, 1644, 1792, 2039
BseRI	GAGGAG	1 cut(s)	1365
BseSI	GKGCMC	2 cut(s)	817, 999
BseX3I	CGGCCG	1 cut(s)	858
BseYI	CCCAGC	1 cut(s)	741
BsgI	GTGCAG	3 cut(s)	345, 675, 1607
Bsh1236I	CGCG	1 cut(s)	1680
Bsh1285I	CGRYCG	1 cut(s)	861
BshFI	GGCC	8 cut(s)	105, 471, 860, 992, 1172, 1643, 1801, 1847
BshNI	GGYRCC	4 cut(s)	179, 1362, 2332, 2401
BshVI	ATCGAT	1 cut(s)	957
BsiEI	CGRYCG	1 cut(s)	861
BsiHKAI	GWGCWC	1 cut(s)	817
BslFI	GGGAC	4 cut(s)	1128, 1143, 1506, 2170
BslI	CCNNNNNNNGG	5 cut(s)	15, 1111, 1571, 1862, 2240
BsmAI	GTCTC	6 cut(s)	145, 189, 598, 642, 790, 1721
BsmBI	CGTCTC	2 cut(s)	598, 642
BsmFI	GGGAC	4 cut(s)	1128, 1143, 1506, 2170
BsnI	GGCC	8 cut(s)	105, 471, 860, 992, 1172, 1643, 1801, 1847
Bsp1286I	GDGCHC	2 cut(s)	817, 999
Bsp13I	TCCGGA	1 cut(s)	191
BspANI	GGCC	8 cut(s)	105, 471, 860, 992, 1172, 1643, 1801, 1847
BspCNI	CTCAG	3 cut(s)	64, 714, 2099
BspDI	ATCGAT	1 cut(s)	957
BspEI	TCCGGA	1 cut(s)	191
BspFNI	CGCG	1 cut(s)	1680
BspHI	TCATGA	3 cut(s)	220, 2176, 2218
BspLI	GGNNCC	6 cut(s)	7, 181, 1364, 2334, 2403, 2439
BspMAI	CTGCAG	1 cut(s)	847
BspMI	ACCTGC	1 cut(s)	836
BspPI	GGATC	4 cut(s)	53, 498, 620, 962
BspT107I	GGYRCC	4 cut(s)	179, 1362, 2332, 2401
BsrBI	CCGCTC	1 cut(s)	153
BsrDI	GCAATG	2 cut(s)	483, 1559
BsrFI	RCCGGY	2 cut(s)	733, 2233
BsrI	ACTGG	5 cut(s)	20, 555, 1644, 1792, 2039
BssAI	RCCGGY	2 cut(s)	733, 2233
BssECI	CCNNGG	6 cut(s)	319, 466, 1042, 1426, 1443, 1489
BssNI	GRCGYC	1 cut(s)	2333
BssSI	CACGAG	2 cut(s)	1329, 1625
BssT1I	CCWWGG	1 cut(s)	319
Bst2BI	CACGAG	2 cut(s)	1329, 1625
Bst2UI	CCWGG	4 cut(s)	467, 1054, 1427, 1445
Bst4CI	ACNGT	7 cut(s)	592, 653, 1043, 2135, 2284, 2340, 2449
Bst6I	CTCTTC	4 cut(s)	601, 1102, 1307, 1393
BstACI	GRCGYC	1 cut(s)	2333
BstC8I	GCNNGC	9 cut(s)	531, 909, 1386, 1605, 1795, 1799, 1907, 1925, 2235
BstDEI	CTNAG	4 cut(s)	72, 156, 722, 2086
BstDSI	CCRYGG	1 cut(s)	1042
BstF5I	GGATG	8 cut(s)	172, 297, 493, 737, 1337, 1675, 1872, 2293
BstFNI	CGCG	1 cut(s)	1680
BstH2I	RGCGCY	2 cut(s)	2240, 2336
BstHHI	GCGC	3 cut(s)	529, 2239, 2335
BstMAI	GTCTC	6 cut(s)	145, 189, 598, 642, 790, 1721
BstMCI	CGRYCG	1 cut(s)	861
BstNI	CCWGG	4 cut(s)	467, 1054, 1427, 1445
BstNSI	RCATGY	1 cut(s)	533
BstPAI	GACNNNNGTC	1 cut(s)	137
BstSCI	CCNGG	5 cut(s)	465, 1052, 1425, 1443, 1488
BstSFI	CTRYAG	2 cut(s)	843, 2163
BstSLI	GKGCMC	2 cut(s)	817, 999
BstUI	CGCG	1 cut(s)	1680
BstX2I	RGATCY	2 cut(s)	1417, 1984
BstXI	CCANNNNNNTGG	1 cut(s)	1373
BstYI	RGATCY	2 cut(s)	1417, 1984
BstZI	CGGCCG	1 cut(s)	858
Bsu15I	ATCGAT	1 cut(s)	957
BsuRI	GGCC	8 cut(s)	105, 471, 860, 992, 1172, 1643, 1801, 1847
BsuTUI	ATCGAT	1 cut(s)	957
BtgI	CCRYGG	1 cut(s)	1042
BtgZI	GCGATG	1 cut(s)	1456
BtrI	CACGTC	1 cut(s)	1534
BtsCI	GGATG	8 cut(s)	172, 297, 493, 737, 1337, 1675, 1872, 2293
BtsI	GCAGTG	2 cut(s)	817, 1857
BtsIMutI	CAGTG	4 cut(s)	817, 1857, 1890, 2280
BveI	ACCTGC	1 cut(s)	836
Cac8I	GCNNGC	9 cut(s)	531, 909, 1386, 1605, 1795, 1799, 1907, 1925, 2235
CaiI	CAGNNNCTG	2 cut(s)	1621, 1738
CciI	TCATGA	3 cut(s)	220, 2176, 2218
CfoI	GCGC	3 cut(s)	529, 2239, 2335
Cfr10I	RCCGGY	2 cut(s)	733, 2233
Cfr13I	GGNCC	2 cut(s)	469, 921
ClaI	ATCGAT	1 cut(s)	957
DdeI	CTNAG	4 cut(s)	72, 156, 722, 2086
DinI	GGCGCC	1 cut(s)	2334
DrdI	GACNNNNNNGTC	1 cut(s)	656
DriI	GACNNNNNGTC	1 cut(s)	1537
DseDI	GACNNNNNNGTC	1 cut(s)	656
EaeI	YGGCCR	4 cut(s)	103, 858, 1641, 1799
EagI	CGGCCG	1 cut(s)	858
Eam1104I	CTCTTC	4 cut(s)	601, 1102, 1307, 1393
Eam1105I	GACNNNNNGTC	1 cut(s)	1537
EarI	CTCTTC	4 cut(s)	601, 1102, 1307, 1393
EclXI	CGGCCG	1 cut(s)	858
Eco130I	CCWWGG	1 cut(s)	319
Eco32I	GATATC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	921
Eco52I	CGGCCG	1 cut(s)	858
Eco57I	CTGAAG	1 cut(s)	1991
EcoRII	CCWGG	4 cut(s)	465, 1052, 1425, 1443
EcoRV	GATATC	1 cut(s)	69
EcoT14I	CCWWGG	1 cut(s)	319
EcoT22I	ATGCAT	2 cut(s)	535, 1872
EgeI	GGCGCC	1 cut(s)	2334
EheI	GGCGCC	1 cut(s)	2334
ErhI	CCWWGG	1 cut(s)	319
Esp3I	CGTCTC	2 cut(s)	598, 642
FaqI	GGGAC	4 cut(s)	1128, 1143, 1506, 2170
FauI	CCCGC	2 cut(s)	940, 1898
FauNDI	CATATG	1 cut(s)	1465
FbaI	TGATCA	5 cut(s)	82, 708, 1672, 2173, 2221
FblI	GTMKAC	2 cut(s)	1260, 2369
FokI	GGATG	8 cut(s)	179, 304, 480, 724, 1324, 1682, 1879, 2300
FspBI	CTAG	9 cut(s)	137, 519, 801, 807, 969, 1190, 1524, 1704, 2240
FspI	TGCGCA	1 cut(s)	528
GlaI	GCGC	3 cut(s)	528, 2238, 2334
GsaI	CCCAGC	1 cut(s)	745
GsuI	CTGGAG	2 cut(s)	1568, 1809
HaeII	RGCGCY	2 cut(s)	2240, 2336
HaeIII	GGCC	8 cut(s)	105, 471, 860, 992, 1172, 1643, 1801, 1847
HhaI	GCGC	3 cut(s)	529, 2239, 2335
Hin1I	GRCGYC	1 cut(s)	2333
Hin6I	GCGC	3 cut(s)	527, 2237, 2333
HinP1I	GCGC	3 cut(s)	527, 2237, 2333
HincII	GTYRAC	2 cut(s)	2044, 2370
HindII	GTYRAC	2 cut(s)	2044, 2370
HindIII	AAGCTT	1 cut(s)	1951
HinfI	GANTC	6 cut(s)	227, 314, 727, 820, 1633, 2069
HphI	GGTGA	4 cut(s)	336, 574, 1604, 2239
Hpy166II	GTNNAC	5 cut(s)	369, 815, 1261, 2044, 2370
Hpy188I	TCNGA	7 cut(s)	73, 127, 166, 376, 625, 883, 2215
Hpy8I	GTNNAC	5 cut(s)	369, 815, 1261, 2044, 2370
Hpy99I	CGWCG	3 cut(s)	1535, 1649, 2374
HpyAV	CCTTC	2 cut(s)	1302, 2368
HpyCH4III	ACNGT	7 cut(s)	592, 653, 1043, 2135, 2284, 2340, 2449
HpyCH4IV	ACGT	3 cut(s)	1533, 1596, 1776
HpyF3I	CTNAG	4 cut(s)	72, 156, 722, 2086
HpySE526I	ACGT	3 cut(s)	1533, 1596, 1776
Hsp92I	GRCGYC	1 cut(s)	2333
HspAI	GCGC	3 cut(s)	527, 2237, 2333
KasI	GGCGCC	1 cut(s)	2332
Kpn2I	TCCGGA	1 cut(s)	191
KpnI	GGTACC	1 cut(s)	183
KroI	GCCGGC	1 cut(s)	2233
KroNI	GCCGGC	1 cut(s)	2235
Ksp22I	TGATCA	5 cut(s)	82, 708, 1672, 2173, 2221
LmnI	GCTCC	3 cut(s)	253, 1790, 2443
LweI	GCATC	9 cut(s)	175, 282, 746, 786, 1307, 1346, 1627, 1857, 2278
MaeI	CTAG	9 cut(s)	137, 519, 801, 807, 969, 1190, 1524, 1704, 2240
MaeII	ACGT	3 cut(s)	1533, 1596, 1776
MaeIII	GTNAC	4 cut(s)	662, 1048, 1354, 1504
MbiI	CCGCTC	1 cut(s)	153
MboII	GAAGA	9 cut(s)	571, 588, 1119, 1175, 1324, 1410, 1979, 2312, 2346
MfeI	CAATTG	1 cut(s)	2395
MflI	RGATCY	2 cut(s)	1417, 1984
MhlI	GDGCHC	2 cut(s)	817, 999
MlsI	TGGCCA	1 cut(s)	1801
MluCI	AATT	8 cut(s)	214, 912, 1484, 1894, 1942, 2026, 2095, 2395
MluNI	TGGCCA	1 cut(s)	1801
Mly113I	GGCGCC	1 cut(s)	2333
MlyI	GAGTC	4 cut(s)	221, 308, 814, 1627
MmeI	TCCRAC	3 cut(s)	86, 813, 2441
Mox20I	TGGCCA	1 cut(s)	1801
Mph1103I	ATGCAT	2 cut(s)	535, 1872
MroI	TCCGGA	1 cut(s)	191
MroNI	GCCGGC	1 cut(s)	2233
MroXI	GAANNNNTTC	1 cut(s)	48
MscI	TGGCCA	1 cut(s)	1801
MseI	TTAA	5 cut(s)	393, 561, 669, 1497, 1815
MslI	CAYNNNNRTG	1 cut(s)	1371
Msp20I	TGGCCA	1 cut(s)	1801
MspA1I	CMGCKG	3 cut(s)	745, 926, 1832
MspR9I	CCNGG	5 cut(s)	467, 1054, 1427, 1445, 1490
MunI	CAATTG	1 cut(s)	2395
MvaI	CCWGG	4 cut(s)	467, 1054, 1427, 1445
MvnI	CGCG	1 cut(s)	1680
NaeI	GCCGGC	1 cut(s)	2235
NarI	GGCGCC	1 cut(s)	2333
NciI	CCSGG	1 cut(s)	1490
NdeI	CATATG	1 cut(s)	1465
NgoMIV	GCCGGC	1 cut(s)	2233
NlaIV	GGNNCC	6 cut(s)	7, 181, 1364, 2334, 2403, 2439
NmuCI	GTSAC	1 cut(s)	1354
NsbI	TGCGCA	1 cut(s)	528
NsiI	ATGCAT	2 cut(s)	535, 1872
NspI	RCATGY	1 cut(s)	533
PaeI	GCATGC	1 cut(s)	533
PagI	TCATGA	3 cut(s)	220, 2176, 2218
PaqCI	CACCTGC	1 cut(s)	836
PdiI	GCCGGC	1 cut(s)	2235
PdmI	GAANNNNTTC	1 cut(s)	48
PfeI	GAWTC	2 cut(s)	727, 2069
PflMI	CCANNNNNTGG	1 cut(s)	15
PleI	GAGTC	4 cut(s)	221, 308, 814, 1627
PluTI	GGCGCC	1 cut(s)	2336
PpsI	GAGTC	4 cut(s)	221, 308, 814, 1627
PshAI	GACNNNNGTC	1 cut(s)	137
PshBI	ATTAAT	2 cut(s)	561, 669
PsiI	TTATAA	1 cut(s)	2295
Psp6I	CCWGG	4 cut(s)	465, 1052, 1425, 1443
PspFI	CCCAGC	1 cut(s)	741
PspGI	CCWGG	4 cut(s)	465, 1052, 1425, 1443
PspN4I	GGNNCC	6 cut(s)	7, 181, 1364, 2334, 2403, 2439
PspPI	GGNCC	2 cut(s)	469, 921
PsrI	GAACNNNNNNTAC	4 cut(s)	505, 537, 1423, 1455
PstI	CTGCAG	1 cut(s)	847
PstNI	CAGNNNCTG	2 cut(s)	1621, 1738
PsuI	RGATCY	2 cut(s)	1417, 1984
PvuII	CAGCTG	1 cut(s)	745
RseI	CAYNNNNRTG	1 cut(s)	1371
SalI	GTCGAC	1 cut(s)	2368
SaqAI	TTAA	5 cut(s)	393, 561, 669, 1497, 1815
Sau96I	GGNCC	2 cut(s)	469, 921
ScaI	AGTACT	7 cut(s)	161, 799, 805, 841, 2020, 2062, 2272
SchI	GAGTC	4 cut(s)	221, 308, 814, 1627
ScrFI	CCNGG	5 cut(s)	467, 1054, 1427, 1445, 1490
SduI	GDGCHC	2 cut(s)	817, 999
SfaNI	GCATC	9 cut(s)	175, 282, 746, 786, 1307, 1346, 1627, 1857, 2278
SfcI	CTRYAG	2 cut(s)	843, 2163
SfoI	GGCGCC	1 cut(s)	2334
SinI	GGWCC	1 cut(s)	921
SmiMI	CAYNNNNRTG	1 cut(s)	1371
SmlI	CTYRAG	2 cut(s)	39, 2263
SmoI	CTYRAG	2 cut(s)	39, 2263
SpeI	ACTAGT	5 cut(s)	136, 518, 800, 968, 1703
SphI	GCATGC	1 cut(s)	533
Sse9I	AATT	8 cut(s)	214, 912, 1484, 1894, 1942, 2026, 2095, 2395
SspDI	GGCGCC	1 cut(s)	2332
SspI	AATATT	2 cut(s)	694, 1205
SspMI	CTAG	9 cut(s)	137, 519, 801, 807, 969, 1190, 1524, 1704, 2240
StyD4I	CCNGG	5 cut(s)	465, 1052, 1425, 1443, 1488
StyI	CCWWGG	1 cut(s)	319
TaaI	ACNGT	7 cut(s)	592, 653, 1043, 2135, 2284, 2340, 2449
TaiI	ACGT	3 cut(s)	1536, 1599, 1779
TasI	AATT	8 cut(s)	214, 912, 1484, 1894, 1942, 2026, 2095, 2395
TatI	WGTACW	7 cut(s)	159, 797, 803, 839, 2018, 2060, 2270
TauI	GCSGC	4 cut(s)	1175, 1826, 1850, 1858
TfiI	GAWTC	2 cut(s)	727, 2069
Tru1I	TTAA	5 cut(s)	393, 561, 669, 1497, 1815
Tru9I	TTAA	5 cut(s)	393, 561, 669, 1497, 1815
TscAI	CASTG	4 cut(s)	817, 1857, 1890, 2287
TseFI	GTSAC	1 cut(s)	1354
Tsp45I	GTSAC	1 cut(s)	1354
TspGWI	ACGGA	4 cut(s)	600, 660, 1662, 2081
TspRI	CASTG	4 cut(s)	817, 1857, 1890, 2287
Van91I	CCANNNNNTGG	1 cut(s)	15
VneI	GTGCAC	1 cut(s)	813
VpaK11BI	GGWCC	1 cut(s)	921
VspI	ATTAAT	2 cut(s)	561, 669
XapI	RAATTY	1 cut(s)	1484
XceI	RCATGY	1 cut(s)	533
XcmI	CCANNNNNNNNNTGG	1 cut(s)	16
XmiI	GTMKAC	2 cut(s)	1260, 2369
XmnI	GAANNNNTTC	1 cut(s)	48
XspI	CTAG	9 cut(s)	137, 519, 801, 807, 969, 1190, 1524, 1704, 2240
ZrmI	AGTACT	7 cut(s)	161, 799, 805, 841, 2020, 2062, 2272
Zsp2I	ATGCAT	2 cut(s)	535, 1872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.