Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004177

Physical Location & Seq

Genomic Coordinates Reverse (-)

5474667 .. 5486437

Gene Structure 11771 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1034300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGATAGGGTAGGAGGGGACATGTGTTTTTTATTTCGTTTAAGTTGGGTGTTAGTCATGGGAAAAAATGAGAGAAATGTGCAGAGGAGTTGGGCTGAAATCATGTGTTGTTTGGATTATTGGTCCTGCATACAGCTCTTCTGGCCAAGAGTCGTCATGCGCAAGTGGCTCAACATCTCCGCCAAAGATTCTGATTACAGCGCCGACACGGAGGACGAAGACGACTGTGACGCCGACTCCGACACCCAAGAGTTTTATCAACGGGGAAGAGATTCGAGGTTTAAAGATATCAAAGAAGATGAGACTGCGAGTGATGATGCTATTGACGATCTTCCAAGGGCACGAAGGCGAATGTCAGAGACTCTTAGGACACAGTATATAAACACAAAGGAATTCAGAGTATTTGCTACAACATGGAATGTTGGAGGACAAATTCCACCCGATGACCTGGACATTGATGGTTGGTTAGATGTCAATGAGCCATCTGATTTCTATGTGATTGGTCTTCAGGAGATTGTACCATTAAATGCTGGGAATATCTTTGGCGCCGAAGATAGCCGCCCAATTACTAAGTGGGAAAACATTATTCGTGAAACACTGGATAGAGTTCGACCTGCAACGAGCAAGGTTAAATCCTTCAGTGATCCTCCATCTCCATCAAAGTTTAAGCCAGCTGATGATATCCCTGATATAGAAGAGGAGATCCTACTTGAAAGTGATAGTGATATTGGTGAAGAAGTCCATCCATTGGATGACGAAACCATAAATTCTGGTGACAGCAAGGGTATATCAGTCACAAATGAAATAGTGAATATTGGTTCTCAAGTTCAAGAATTTACTGATAGCAAACCAGGCATGCCAACCGGACAGGATTTACTGAGGCAAAGTTATCCTGCAAAGAGATTGGATAGGTTATATAGCCTTCAGACAGATGATTGTTCATTAGATGATGAAGCAACTTCTGGTGTCCAATTTAATGGCAAGTTAACCAGAATGCTTAGTGGATCTGAAAGGATTGGTTTGAGCTGGCCGGAGCCTCCATTAAACTTGCTATCTCAGCACTTACTAGAAAGACGGAATTCCTTTCGAACAATGAAGTCTTTCAAATCCCCAAAATCTTTGAAAACGTACAATTCTGTCAAGTCAACTGTGAATGATGTGCCATCAGAAATAGCATTGCTTGCAGAGGTTGATCTTGAATCTCTCATGAAACGAAAAAGAAGATCATCCTATGTAAGGATTGTAAGCAAGCAGATGGTCGGGGTGTTCCTAACTGTATGGGTTCGTAGGGGGTTGCGTAAACATATTCAGAACGTTAAGGTGTCTACTGTTGGTGTTGGTGTTATGGGATACATTGGTAACAAGGGATCTATATCTGTCAGCATGTCTGTATATCAGACACTTTTTTGTTTTGTGTGCACTCACCTGACAGCAGGTGAGAAAGAGGCAGATGAAATAAAAAGAAATGCTGATGTGCAAGAAATACATCGGAGAACTCACTTTCGTTCGTTTTCTGGTATTGGGCTTCCCAAAACTATCTATGACCATGAAAGAATAATTTGGTTGGGTGATCTAAATTATCGTCTTAATTTGTCATATGAGAAAACACGAGATCTTATCTCCCAAAAGGCGTGGTCCACGTTGGTTGAGAAGGACCAGCTTGCAAAACAGCTTAAAAAAGGCCGTGCATTTGATGGATGGTCAGAGGGTGTTCTAAATTTTCCACCAACGTACAAGTATGAGACCAATTCAGAGAAGTACTATAGGGAGGATGCAAAGACCGGGAGGCGAACTCCAGCATGGTGTGACCGCATTCTTTCATATGGACGAGCAATGAGGTTACTGAGTTATAGAAGGGCTGAACTTAAACTTTCTGATCATCGGCCAGTGACTGCCACATATGCAGTTGAGGTTGAGGTGTTTTGTCCTAGGAGGCTACAACGGGCCCTCACGTTCACTGATGCCGAGATTGAAAATGAGGACATCGTAATGGATATGGGTATTGATGTTGGAGTGAACTGCTTAAAATTGGAACAGGATATTTCTGATTGGGAGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0004445 GO:0005975 GO:0006066 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009791 GO:0009845 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0030258 GO:0032501 GO:0032502 GO:0032957 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0043647 GO:0044237 GO:0044238 GO:0044255 GO:0044262 GO:0044281 GO:0044282 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046486 GO:0046488 GO:0046838 GO:0046839 GO:0046855 GO:0046856 GO:0048856 GO:0052745 GO:0052866 GO:0071545 GO:0071704 GO:0090351 GO:0106019 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko03010 ko04070 map00562 map01100 map03010 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

687

Amino Acids

78.73

Weight (kDa)

5.34

Isoelectric Point (pI)

48.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	137 - 202	3.2e-06	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	398 - 632	5.2e-67	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71710 AT1G71710
fragaria_vesca	FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960
malus_domestica	MD05G1034300.v1.1 MD10G1036300.v1.1
prunus_persica	Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1
pyrus_communis	pycom05g02480 pycom10g02470
rosa_chinensis	RchiOBHm_Chr6g0274091
rosa_laevigata	RLG00000013579
rosa_multiflora	Rmu_co8515147.1_g000001 Rmu_ssc0000413.1_g000006
rosa_roxburghii	Rroxscaffold_7G00194670
rosa_rugosa	Rorug06G0078500 Rorug06G0078500 Rorug06G0078500
rosa_samantha	Rh6AG194400 Rh6BG198400 Rh6CG198300 Rh6DG189800
rosa_wichuraiana	Rw0G007940 Rw6G016940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1424
Acc16I	TGCGCA	1 cut(s)	161
Acc36I	ACCTGC	2 cut(s)	622, 1424
AccB1I	GGYRCC	1 cut(s)	545
AccB7I	CCANNNNNTGG	1 cut(s)	748
AccI	GTMKAC	1 cut(s)	1325
AciI	CCGC	3 cut(s)	180, 559, 1810
AclI	AACGTT	1 cut(s)	1314
AclWI	GGATC	4 cut(s)	638, 697, 1012, 1375
AcoI	YGGCCR	3 cut(s)	143, 1028, 1883
AcsI	RAATTY	6 cut(s)	392, 432, 766, 833, 1078, 1717
AcuI	CTGAAG	3 cut(s)	491, 622, 908
AcyI	GRCGYC	2 cut(s)	231, 546
AfaI	GTAC	4 cut(s)	519, 1130, 1733, 1760
AfiI	CCNNNNNNNGG	2 cut(s)	748, 1236
AflIII	ACRYGT	1 cut(s)	21
AgsI	TTSAA	6 cut(s)	713, 830, 1105, 1123, 1199, 1973
AjnI	CCWGG	2 cut(s)	447, 850
AluBI	AGCT	5 cut(s)	136, 674, 1026, 1660, 1672
AluI	AGCT	5 cut(s)	136, 674, 1026, 1660, 1672
Alw21I	GWGCWC	1 cut(s)	1421
Alw26I	GTCTC	3 cut(s)	296, 353, 1736
Alw44I	GTGCAC	1 cut(s)	1417
AlwI	GGATC	4 cut(s)	638, 697, 1012, 1375
AlwNI	CAGNNNCTG	1 cut(s)	1892
AoxI	GGCC	5 cut(s)	143, 1028, 1681, 1883, 1944
ApaI	GGGCCC	1 cut(s)	1948
ApaLI	GTGCAC	1 cut(s)	1417
ApoI	RAATTY	6 cut(s)	392, 432, 766, 833, 1078, 1717
Asp700I	GAANNNNTTC	2 cut(s)	271, 1100
AspA2I	CCTAGG	1 cut(s)	1928
AspLEI	GCGC	3 cut(s)	162, 203, 548
AspS9I	GGNCC	5 cut(s)	123, 1635, 1654, 1944, 1945
AsuC2I	CCSGG	1 cut(s)	1783
AsuHPI	GGTGA	5 cut(s)	743, 785, 1415, 1448, 1580
AsuII	TTCGAA	1 cut(s)	1087
AvaII	GGWCC	3 cut(s)	123, 1635, 1654
AvrII	CCTAGG	1 cut(s)	1928
BaeGI	GKGCMC	3 cut(s)	343, 1421, 1948
BaeI	ACNNNNGTAYC	2 cut(s)	1342, 1375
BalI	TGGCCA	1 cut(s)	145
BanI	GGYRCC	1 cut(s)	545
BanII	GRGCYC	1 cut(s)	1948
BauI	CACGAG	1 cut(s)	1608
BbsI	GAAGAC	2 cut(s)	225, 497
Bbv12I	GWGCWC	1 cut(s)	1421
BccI	CCATC	9 cut(s)	452, 490, 658, 664, 750, 1171, 1249, 1688, 1692
BceAI	ACGGC	1 cut(s)	1668
BciT130I	CCWGG	2 cut(s)	449, 852
BciVI	GTATCC	1 cut(s)	1343
BclI	TGATCA	1 cut(s)	1876
BcnI	CCSGG	1 cut(s)	1783
BcoDI	GTCTC	3 cut(s)	296, 353, 1736
BfaI	CTAG	2 cut(s)	1067, 1929
BfmI	CTRYAG	1 cut(s)	1762
BfoI	RGCGCY	2 cut(s)	204, 549
BfuAI	ACCTGC	2 cut(s)	622, 1424
BfuI	GTATCC	1 cut(s)	1343
BglII	AGATCT	1 cut(s)	1612
BisI	GCNGC	1 cut(s)	559
BlnI	CCTAGG	1 cut(s)	1928
BlsI	GCNGC	1 cut(s)	560
BmcAI	AGTACT	1 cut(s)	1760
Bme1390I	CCNGG	3 cut(s)	449, 852, 1783
Bme18I	GGWCC	3 cut(s)	123, 1635, 1654
BmgT120I	GGNCC	5 cut(s)	123, 1635, 1654, 1944, 1945
BmiI	GGNNCC	3 cut(s)	547, 1035, 1946
BmrFI	CCNGG	3 cut(s)	449, 852, 1783
BmsI	GCATC	3 cut(s)	307, 1762, 1951
BpiI	GAAGAC	2 cut(s)	225, 497
BplI	GAGNNNNNCTC	2 cut(s)	1777, 1809
BpmI	CTGGAG	1 cut(s)	1779
Bpu14I	TTCGAA	1 cut(s)	1087
BpuEI	CTTGAG	1 cut(s)	807
BpuMI	CCSGG	1 cut(s)	1783
BsaBI	GATNNNNATC	1 cut(s)	1372
BsaHI	GRCGYC	2 cut(s)	231, 546
BsaI	GGTCTC	1 cut(s)	1736
BsaJI	CCNNGG	2 cut(s)	335, 1928
BsaWI	WCCGGW	1 cut(s)	863
BsaXI	ACNNNNNCTCC	2 cut(s)	221, 251
Bsc4I	CCNNNNNNNGG	2 cut(s)	748, 1236
Bse1I	ACTGG	2 cut(s)	603, 1886
Bse3DI	GCAATG	2 cut(s)	1175, 1839
Bse8I	GATNNNNATC	1 cut(s)	1372
BseBI	CCWGG	2 cut(s)	449, 852
BseDI	CCNNGG	2 cut(s)	335, 1928
BseGI	GGATG	5 cut(s)	742, 757, 1226, 1703, 1777
BseJI	GATNNNNATC	1 cut(s)	1372
BseLI	CCNNNNNNNGG	2 cut(s)	748, 1236
BseMI	GCAATG	2 cut(s)	1175, 1839
BseMII	CTCAG	3 cut(s)	869, 1070, 1835
BseNI	ACTGG	2 cut(s)	603, 1886
BseRI	GAGGAG	2 cut(s)	100, 713
BseSI	GKGCMC	3 cut(s)	343, 1421, 1948
BseYI	CCCAGC	1 cut(s)	530
BsgI	GTGCAG	1 cut(s)	101
BshFI	GGCC	5 cut(s)	145, 1030, 1683, 1885, 1946
BshNI	GGYRCC	1 cut(s)	545
BsiHKAI	GWGCWC	1 cut(s)	1421
BsiSI	CCGG	3 cut(s)	864, 1031, 1782
BslFI	GGGAC	1 cut(s)	32
BslI	CCNNNNNNNGG	2 cut(s)	748, 1236
BsmAI	GTCTC	3 cut(s)	296, 353, 1736
BsmFI	GGGAC	1 cut(s)	32
BsmI	GAATGC	2 cut(s)	999, 1812
BsnI	GGCC	5 cut(s)	145, 1030, 1683, 1885, 1946
Bso31I	GGTCTC	1 cut(s)	1736
Bsp119I	TTCGAA	1 cut(s)	1087
Bsp120I	GGGCCC	1 cut(s)	1944
Bsp1286I	GDGCHC	3 cut(s)	343, 1421, 1948
BspACI	CCGC	3 cut(s)	180, 559, 1810
BspANI	GGCC	5 cut(s)	145, 1030, 1683, 1885, 1946
BspCNI	CTCAG	3 cut(s)	870, 1069, 1836
BspHI	TCATGA	1 cut(s)	1206
BspLI	GGNNCC	3 cut(s)	547, 1035, 1946
BspMI	ACCTGC	2 cut(s)	622, 1424
BspPI	GGATC	4 cut(s)	638, 697, 1012, 1375
BspQI	GCTCTTC	1 cut(s)	143
BspT104I	TTCGAA	1 cut(s)	1087
BspT107I	GGYRCC	1 cut(s)	545
BspTNI	GGTCTC	1 cut(s)	1736
BsrDI	GCAATG	2 cut(s)	1175, 1839
BsrI	ACTGG	2 cut(s)	603, 1886
BssECI	CCNNGG	2 cut(s)	335, 1928
BssNI	GRCGYC	2 cut(s)	231, 546
BssSI	CACGAG	1 cut(s)	1608
BssT1I	CCWWGG	2 cut(s)	335, 1928
Bst2BI	CACGAG	1 cut(s)	1608
Bst2UI	CCWGG	2 cut(s)	449, 852
Bst4CI	ACNGT	5 cut(s)	227, 375, 1150, 1276, 1330
Bst6I	CTCTTC	3 cut(s)	143, 262, 690
BstACI	GRCGYC	2 cut(s)	231, 546
BstAPI	GCANNNNNTGC	1 cut(s)	1181
BstBI	TTCGAA	1 cut(s)	1087
BstC8I	GCNNGC	6 cut(s)	672, 857, 1028, 1182, 1250, 1662
BstDEI	CTNAG	6 cut(s)	365, 570, 878, 998, 1056, 1844
BstENI	CCTNNNNNAGG	1 cut(s)	1234
BstF5I	GGATG	5 cut(s)	742, 757, 1226, 1703, 1777
BstH2I	RGCGCY	2 cut(s)	204, 549
BstHHI	GCGC	3 cut(s)	162, 203, 548
BstMAI	GTCTC	3 cut(s)	296, 353, 1736
BstMWI	GCNNNNNNNGC	6 cut(s)	142, 166, 852, 1057, 1181, 1901
BstNI	CCWGG	2 cut(s)	449, 852
BstNSI	RCATGY	3 cut(s)	25, 859, 1387
BstSCI	CCNGG	3 cut(s)	447, 850, 1781
BstSFI	CTRYAG	1 cut(s)	1762
BstSLI	GKGCMC	3 cut(s)	343, 1421, 1948
BstV2I	GAAGAC	2 cut(s)	225, 497
BstX2I	RGATCY	4 cut(s)	702, 1004, 1367, 1612
BstXI	CCANNNNNNTGG	1 cut(s)	977
BstYI	RGATCY	4 cut(s)	702, 1004, 1367, 1612
BsuI	GTATCC	1 cut(s)	1343
BsuRI	GGCC	5 cut(s)	145, 1030, 1683, 1885, 1946
BtsCI	GGATG	5 cut(s)	742, 757, 1226, 1703, 1777
BtsIMutI	CAGTG	4 cut(s)	596, 646, 1893, 1956
BveI	ACCTGC	2 cut(s)	622, 1424
Cac8I	GCNNGC	6 cut(s)	672, 857, 1028, 1182, 1250, 1662
CaiI	CAGNNNCTG	1 cut(s)	1892
CciI	TCATGA	1 cut(s)	1206
CfoI	GCGC	3 cut(s)	162, 203, 548
Cfr13I	GGNCC	5 cut(s)	123, 1635, 1654, 1944, 1945
CseI	GACGC	1 cut(s)	239
Csp6I	GTAC	4 cut(s)	518, 1129, 1732, 1759
CspCI	CAANNNNNGTGG	4 cut(s)	1613, 1627, 1648, 1662
CviQI	GTAC	4 cut(s)	518, 1129, 1732, 1759
DdeI	CTNAG	6 cut(s)	365, 570, 878, 998, 1056, 1844
DinI	GGCGCC	1 cut(s)	547
DraI	TTTAAA	1 cut(s)	283
EaeI	YGGCCR	3 cut(s)	143, 1028, 1883
Eam1104I	CTCTTC	3 cut(s)	143, 262, 690
EarI	CTCTTC	3 cut(s)	143, 262, 690
EciI	GGCGGA	1 cut(s)	169
Eco130I	CCWWGG	2 cut(s)	335, 1928
Eco24I	GRGCYC	1 cut(s)	1948
Eco31I	GGTCTC	1 cut(s)	1736
Eco32I	GATATC	2 cut(s)	289, 682
Eco47I	GGWCC	3 cut(s)	123, 1635, 1654
Eco57I	CTGAAG	3 cut(s)	491, 622, 908
EcoNI	CCTNNNNNAGG	1 cut(s)	1234
EcoO109I	RGGNCCY	1 cut(s)	1945
EcoRI	GAATTC	2 cut(s)	392, 1078
EcoRII	CCWGG	2 cut(s)	447, 850
EcoRV	GATATC	2 cut(s)	289, 682
EcoT14I	CCWWGG	2 cut(s)	335, 1928
EcoT38I	GRGCYC	1 cut(s)	1948
EgeI	GGCGCC	1 cut(s)	547
EheI	GGCGCC	1 cut(s)	547
ErhI	CCWWGG	2 cut(s)	335, 1928
FaqI	GGGAC	1 cut(s)	32
FauNDI	CATATG	3 cut(s)	1597, 1822, 1900
FbaI	TGATCA	1 cut(s)	1876
FblI	GTMKAC	1 cut(s)	1325
Fnu4HI	GCNGC	1 cut(s)	559
FokI	GGATG	5 cut(s)	729, 764, 1213, 1710, 1784
FriOI	GRGCYC	1 cut(s)	1948
Fsp4HI	GCNGC	1 cut(s)	559
FspBI	CTAG	2 cut(s)	1067, 1929
FspI	TGCGCA	1 cut(s)	161
GlaI	GCGC	3 cut(s)	161, 202, 547
GluI	GCNGC	1 cut(s)	559
GsaI	CCCAGC	1 cut(s)	534
GsuI	CTGGAG	1 cut(s)	1779
HaeII	RGCGCY	2 cut(s)	204, 549
HaeIII	GGCC	5 cut(s)	145, 1030, 1683, 1885, 1946
HapII	CCGG	3 cut(s)	864, 1031, 1782
HgaI	GACGC	1 cut(s)	239
HhaI	GCGC	3 cut(s)	162, 203, 548
Hin1I	GRCGYC	2 cut(s)	231, 546
Hin6I	GCGC	3 cut(s)	160, 201, 546
HinP1I	GCGC	3 cut(s)	160, 201, 546
HincII	GTYRAC	2 cut(s)	987, 1146
HindII	GTYRAC	2 cut(s)	987, 1146
HinfI	GANTC	6 cut(s)	150, 188, 236, 272, 361, 1199
HpaI	GTTAAC	1 cut(s)	987
HpaII	CCGG	3 cut(s)	864, 1031, 1782
HphI	GGTGA	5 cut(s)	743, 785, 1415, 1448, 1580
Hpy166II	GTNNAC	8 cut(s)	987, 1146, 1301, 1326, 1419, 1638, 1956, 2017
Hpy188III	TCNNGA	5 cut(s)	509, 590, 830, 1196, 1207
Hpy8I	GTNNAC	8 cut(s)	987, 1146, 1301, 1326, 1419, 1638, 1956, 2017
HpyAV	CCTTC	5 cut(s)	339, 646, 932, 1645, 1848
HpyCH4III	ACNGT	5 cut(s)	227, 375, 1150, 1276, 1330
HpyCH4IV	ACGT	5 cut(s)	1127, 1314, 1640, 1730, 1952
HpyF10VI	GCNNNNNNNGC	6 cut(s)	142, 166, 852, 1057, 1181, 1901
HpyF3I	CTNAG	6 cut(s)	365, 570, 878, 998, 1056, 1844
HpySE526I	ACGT	5 cut(s)	1127, 1314, 1640, 1730, 1952
Hsp92I	GRCGYC	2 cut(s)	231, 546
HspAI	GCGC	3 cut(s)	160, 201, 546
KasI	GGCGCC	1 cut(s)	545
Ksp22I	TGATCA	1 cut(s)	1876
KspAI	GTTAAC	1 cut(s)	987
LguI	GCTCTTC	1 cut(s)	143
LmnI	GCTCC	2 cut(s)	1033, 2053
LweI	GCATC	3 cut(s)	307, 1762, 1951
MaeI	CTAG	2 cut(s)	1067, 1929
MaeII	ACGT	5 cut(s)	1127, 1314, 1640, 1730, 1952
MaeIII	GTNAC	7 cut(s)	227, 773, 793, 1358, 1805, 1839, 1888
MflI	RGATCY	4 cut(s)	702, 1004, 1367, 1612
MhlI	GDGCHC	3 cut(s)	343, 1421, 1948
MlsI	TGGCCA	1 cut(s)	145
MluNI	TGGCCA	1 cut(s)	145
Mly113I	GGCGCC	1 cut(s)	546
MlyI	GAGTC	3 cut(s)	159, 230, 355
MmeI	TCCRAC	3 cut(s)	264, 403, 1990
Mox20I	TGGCCA	1 cut(s)	145
MroXI	GAANNNNTTC	2 cut(s)	271, 1100
MscI	TGGCCA	1 cut(s)	145
MslI	CAYNNNNRTG	1 cut(s)	1988
Msp20I	TGGCCA	1 cut(s)	145
MspA1I	CMGCKG	1 cut(s)	674
MspI	CCGG	3 cut(s)	864, 1031, 1782
MspR9I	CCNGG	3 cut(s)	449, 852, 1783
Mva1269I	GAATGC	2 cut(s)	999, 1812
MvaI	CCWGG	2 cut(s)	449, 852
MwoI	GCNNNNNNNGC	6 cut(s)	142, 166, 852, 1057, 1181, 1901
NarI	GGCGCC	1 cut(s)	546
NciI	CCSGG	1 cut(s)	1783
NdeI	CATATG	3 cut(s)	1597, 1822, 1900
NlaIV	GGNNCC	3 cut(s)	547, 1035, 1946
NmeAIII	GCCGAG	1 cut(s)	1990
NmuCI	GTSAC	5 cut(s)	227, 773, 793, 1805, 1888
NsbI	TGCGCA	1 cut(s)	161
NspI	RCATGY	3 cut(s)	25, 859, 1387
NspV	TTCGAA	1 cut(s)	1087
PaeI	GCATGC	1 cut(s)	859
PagI	TCATGA	1 cut(s)	1206
PaqCI	CACCTGC	1 cut(s)	1424
PciI	ACATGT	1 cut(s)	21
PciSI	GCTCTTC	1 cut(s)	143
PcsI	WCGNNNNNNNCGW	1 cut(s)	237
PctI	GAATGC	2 cut(s)	999, 1812
PdmI	GAANNNNTTC	2 cut(s)	271, 1100
PfeI	GAWTC	3 cut(s)	188, 272, 1199
PflMI	CCANNNNNTGG	1 cut(s)	748
PkrI	GCNGC	1 cut(s)	560
PleI	GAGTC	3 cut(s)	158, 230, 355
PluTI	GGCGCC	1 cut(s)	549
PpsI	GAGTC	3 cut(s)	158, 230, 355
PscI	ACATGT	1 cut(s)	21
Psp1406I	AACGTT	1 cut(s)	1314
Psp6I	CCWGG	2 cut(s)	447, 850
PspFI	CCCAGC	1 cut(s)	530
PspGI	CCWGG	2 cut(s)	447, 850
PspN4I	GGNNCC	3 cut(s)	547, 1035, 1946
PspOMI	GGGCCC	1 cut(s)	1944
PspPI	GGNCC	5 cut(s)	123, 1635, 1654, 1944, 1945
PstNI	CAGNNNCTG	1 cut(s)	1892
PsuI	RGATCY	4 cut(s)	702, 1004, 1367, 1612
PvuII	CAGCTG	1 cut(s)	674
RsaI	GTAC	4 cut(s)	519, 1130, 1733, 1760
RsaNI	GTAC	4 cut(s)	518, 1129, 1732, 1759
RseI	CAYNNNNRTG	1 cut(s)	1988
SapI	GCTCTTC	1 cut(s)	143
SatI	GCNGC	1 cut(s)	559
Sau96I	GGNCC	5 cut(s)	123, 1635, 1654, 1944, 1945
ScaI	AGTACT	1 cut(s)	1760
SchI	GAGTC	3 cut(s)	159, 230, 355
ScrFI	CCNGG	3 cut(s)	449, 852, 1783
SduI	GDGCHC	3 cut(s)	343, 1421, 1948
SfaNI	GCATC	3 cut(s)	307, 1762, 1951
SfcI	CTRYAG	1 cut(s)	1762
SfoI	GGCGCC	1 cut(s)	547
SfuI	TTCGAA	1 cut(s)	1087
SinI	GGWCC	3 cut(s)	123, 1635, 1654
SmiMI	CAYNNNNRTG	1 cut(s)	1988
SmlI	CTYRAG	1 cut(s)	822
SmoI	CTYRAG	1 cut(s)	822
SphI	GCATGC	1 cut(s)	859
SsiI	CCGC	3 cut(s)	180, 559, 1810
SspDI	GGCGCC	1 cut(s)	545
SspI	AATATT	1 cut(s)	814
SspMI	CTAG	2 cut(s)	1067, 1929
StyD4I	CCNGG	3 cut(s)	447, 850, 1781
StyI	CCWWGG	2 cut(s)	335, 1928
TaaI	ACNGT	5 cut(s)	227, 375, 1150, 1276, 1330
TaiI	ACGT	5 cut(s)	1130, 1317, 1643, 1733, 1955
TaqI	TCGA	3 cut(s)	275, 610, 1087
TatI	WGTACW	1 cut(s)	1758
TauI	GCSGC	1 cut(s)	561
TfiI	GAWTC	3 cut(s)	188, 272, 1199
TscAI	CASTG	4 cut(s)	603, 646, 1893, 1963
TseFI	GTSAC	5 cut(s)	227, 773, 793, 1805, 1888
Tsp45I	GTSAC	5 cut(s)	227, 773, 793, 1805, 1888
TspDTI	ATGAA	8 cut(s)	816, 930, 966, 1109, 1223, 1467, 1563, 1809
TspGWI	ACGGA	2 cut(s)	224, 1090
TspRI	CASTG	4 cut(s)	603, 646, 1893, 1963
Van91I	CCANNNNNTGG	1 cut(s)	748
VneI	GTGCAC	1 cut(s)	1417
VpaK11BI	GGWCC	3 cut(s)	123, 1635, 1654
XagI	CCTNNNNNAGG	1 cut(s)	1234
XapI	RAATTY	6 cut(s)	392, 432, 766, 833, 1078, 1717
XceI	RCATGY	3 cut(s)	25, 859, 1387
XcmI	CCANNNNNNNNNTGG	1 cut(s)	570
XmaJI	CCTAGG	1 cut(s)	1928
XmiI	GTMKAC	1 cut(s)	1325
XmnI	GAANNNNTTC	2 cut(s)	271, 1100
XspI	CTAG	2 cut(s)	1067, 1929
ZrmI	AGTACT	1 cut(s)	1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.