Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0004177

Physical Location & Seq

Genomic Coordinates Forward (+)

33076785 .. 33091417

Gene Structure 14633 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG198300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAAGCCCAACCCCAAGAATCAGCAACAGCTGTTCTGGCCCAGAGTTGTGATGCGCAAATGGCTCAACATCTCCGCCAAAGAGTCCGATTACAGCGCCGATACCGAAGACGAAGACGACTGGGATCCTGACTCCCCAACAAGCCAGCAAGATTTTGATCAACGGGGAAGAGGATCAAGGTTTAAAGATATCAAAGAGGATGAGCCGGAGGATGATGATGACCTTGATGATCTTCCTAGAGTACGAAGACGAAAATCAGAGACCTTTAGAACACAGTATATAAATACAAAGGAACTCAGAATATGTGTTGGTACATGGAATGTTGGAGGACAGACTCCACCGGATGACCTGGATATTGATGGTTGGCTAGATATCAATGACCCAGCCGACATCTATGTAATTGGTCTTCAGGAGATCGTGCCACTCAATGCTGGGAATATATTTGGTGCCGAAGATAGCCGGCCAGTTAGTAAGTGGGAAAATGTCATTCGGGAAACGCTGGATAGATTTCGACCTGCCGGAAACAAGGTTAAATCCTTTAGTGATCCTCCATCACCCTCAAAATTTAGGCCATCTGATGATGTCCCTTATACGGAAGAGGAGATATTAGATGAAAGTGATAGTGATATTGGCAATGAAGTCCATCCATTGGATGACGAACCCAAAGATTTTGGTGTCAGCAATGGTACATCAGTCACAAGCGAAACAGTGAATGTTGATGGTCCTGTTTCTAACTTTACTGATAGTACTAAACCGGGGATGCCAATTGGAGAGGATTTACAGAGGCAACATTCTTCTCCAAAGAGATTAGATAGGTTATATTGCCTTCGGCCAGATAATTCTCCATTAGATGAAGACACTTCTGCTGTCCAACATAATGGCAAGTTAACCAAAATGCTTAGTGGGTCTGAAAGAATTGGTTTGAACTGGCCGGAGCGTCCATTGAACTTGCTATCTCAGCACTTATTAGAGCGACGAAATTCCTTTAGACCAACGAAGTCTTTCAAGTCCTCAAAATCTTTCAGGACACACAATTCTTTCAAGTCAGCTGCAAATGACATGGCACCAGAATTAGTTTTGCTTGGAGAGATTGATCTTGAATCTCTCATGAAACGGGAACGAAGATCATCATATGTAAGGATAGTAAGTAAGCAGATGGTTGGGATTTTCCTAACTGTATGGGTTCGTAGGAGCTTACGAAAACACATTCAGAACTTAAAGGTGTCAACTGTTGGTGTTGGTGTTATGGGATACATTGGTAACAAGGGATCTGTATCTGTGAGTATGTCCATATATCAGACGCTGTTTTGTTTCGTGTGCACTCACCTGACAGCAGGTGAAAGGGAGGTAGATGAATCAAAAAGAAATGCTGATGTGCATGAAATTCATCGGAGAACTCACTTTCATTCGTTTTCTGGTATTGGGCTTCCGAAAAGTATCCATGACCATGAAAGAATAATTTGGTTGGGTGATCTAAATTATCGTATCAACTTGTCATATGAGAAAACACAAGATCTTATCTCCAAAAAGGAGTGGTCCCAGTTGGCTGAGAAGGACCAGCTTGCACGACAATTGAAAAAAGGTCGTGCATTTGATGGATGGTCTGAGGGTGTTCTAAATTTCCCGCCAACGTATAAGTATGAGATGAATTCAGACAAGTATTATGGAGAGGATCCAAAGGGTGGAAGGCGGACTCCAGCATGGTGTGACCGCATTCTTTCATATGGCCGAGGAATGAGGTTACTGCAGTATAGAAGGACTGAACACAAATTTTCTGATCATCGACCAGTGACTGCTACTTATATGGCAGAGGTTGAGGTTTTTTCTGCTAGGAGGCTTCAGCGGGCCCTCACATTCACTGATGCAGAGATTGAAAATGAGGAAATTGCAACAGATATGGGTATTGAAGTTGGAATGAACAACTTAAAATTGGAACAGGTATGTACTTTACTAGGCATGTTGTGCATACACTGGTGGTACCTCCAGTTTCTTAAGAACTATATATCTGCTGTCACATTTGTTCTTTTTTTTTTTCTATGTTTTTATTTATTTATTTATTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0004445 GO:0005975 GO:0006066 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009791 GO:0009845 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0030258 GO:0032501 GO:0032502 GO:0032957 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0043647 GO:0044237 GO:0044238 GO:0044255 GO:0044262 GO:0044281 GO:0044282 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046486 GO:0046488 GO:0046838 GO:0046839 GO:0046855 GO:0046856 GO:0048856 GO:0052745 GO:0052866 GO:0071545 GO:0071704 GO:0090351 GO:0106019 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko03010 ko04070 map00562 map01100 map03010 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

687

Amino Acids

79.24

Weight (kDa)

5.78

Isoelectric Point (pI)

49.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	104 - 170	4e-07	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	366 - 599	3.8e-67	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71710 AT1G71710
fragaria_vesca	FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960
malus_domestica	MD05G1034300.v1.1 MD10G1036300.v1.1
prunus_persica	Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1
pyrus_communis	pycom05g02480 pycom10g02470
rosa_chinensis	RchiOBHm_Chr6g0274091
rosa_laevigata	RLG00000013579
rosa_multiflora	Rmu_co8515147.1_g000001 Rmu_ssc0000413.1_g000006
rosa_roxburghii	Rroxscaffold_7G00194670
rosa_rugosa	Rorug06G0078500 Rorug06G0078500 Rorug06G0078500
rosa_samantha	Rh6AG194400 Rh6BG198400 Rh6CG198300 Rh6DG189800
rosa_wichuraiana	Rw0G007940 Rw6G016940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1325
Acc16I	TGCGCA	1 cut(s)	56
Acc36I	ACCTGC	2 cut(s)	523, 1325
Acc65I	GGTACC	1 cut(s)	1977
AccB1I	GGYRCC	3 cut(s)	446, 1063, 1977
AccB7I	CCANNNNNTGG	2 cut(s)	649, 1682
AciI	CCGC	5 cut(s)	75, 1625, 1690, 1711, 1843
AclWI	GGATC	7 cut(s)	119, 132, 181, 539, 1276, 1667, 1680
AcoI	YGGCCR	4 cut(s)	461, 830, 929, 1726
AcsI	RAATTY	6 cut(s)	563, 979, 1383, 1618, 1648, 1769
AcuI	CTGAAG	2 cut(s)	392, 1823
AfaI	GTAC	6 cut(s)	243, 313, 688, 748, 1945, 1979
AfiI	CCNNNNNNNGG	3 cut(s)	592, 649, 1682
AflII	CTTAAG	1 cut(s)	1991
AgsI	TTSAA	8 cut(s)	925, 946, 1006, 1042, 1100, 1576, 1874, 1907
AjnI	CCWGG	1 cut(s)	348
AluBI	AGCT	4 cut(s)	31, 1049, 1194, 1561
AluI	AGCT	4 cut(s)	31, 1049, 1194, 1561
Alw21I	GWGCWC	1 cut(s)	1322
Alw26I	GTCTC	1 cut(s)	254
Alw44I	GTGCAC	1 cut(s)	1318
AlwI	GGATC	7 cut(s)	119, 132, 181, 539, 1276, 1667, 1680
AlwNI	CAGNNNCTG	2 cut(s)	1303, 1793
AoxI	GGCC	7 cut(s)	38, 461, 569, 830, 929, 1726, 1845
ApaI	GGGCCC	1 cut(s)	1849
ApaLI	GTGCAC	1 cut(s)	1318
ApeKI	GCWGC	1 cut(s)	1049
ApoI	RAATTY	6 cut(s)	563, 979, 1383, 1618, 1648, 1769
Asp700I	GAANNNNTTC	1 cut(s)	1001
Asp718I	GGTACC	1 cut(s)	1977
AspLEI	GCGC	2 cut(s)	57, 98
AspS9I	GGNCC	6 cut(s)	39, 722, 1536, 1555, 1845, 1846
AsuC2I	CCSGG	1 cut(s)	756
AsuHPI	GGTGA	4 cut(s)	546, 1316, 1349, 1481
AvaII	GGWCC	3 cut(s)	722, 1536, 1555
BaeGI	GKGCMC	2 cut(s)	1322, 1849
BaeI	ACNNNNGTAYC	4 cut(s)	678, 711, 1243, 1276
BamHI	GGATCC	2 cut(s)	124, 1672
BanI	GGYRCC	3 cut(s)	446, 1063, 1977
BanII	GRGCYC	1 cut(s)	1849
BarI	GAAGNNNNNNTAC	2 cut(s)	390, 422
BbsI	GAAGAC	5 cut(s)	114, 120, 253, 398, 861
Bbv12I	GWGCWC	1 cut(s)	1322
BbvI	GCAGC	1 cut(s)	1036
BccI	CCATC	8 cut(s)	353, 559, 580, 651, 713, 1150, 1589, 1593
BciT130I	CCWGG	1 cut(s)	350
BciVI	GTATCC	2 cut(s)	1244, 1448
BclI	TGATCA	2 cut(s)	157, 1777
BcnI	CCSGG	1 cut(s)	756
BcoDI	GTCTC	1 cut(s)	254
BfaI	CTAG	4 cut(s)	237, 368, 1830, 1952
BfmI	CTRYAG	1 cut(s)	1745
BfoI	RGCGCY	1 cut(s)	99
BfrI	CTTAAG	1 cut(s)	1991
BfuAI	ACCTGC	2 cut(s)	523, 1325
BfuI	GTATCC	2 cut(s)	1244, 1448
BglII	AGATCT	1 cut(s)	1513
BisI	GCNGC	1 cut(s)	1050
BlsI	GCNGC	1 cut(s)	1051
BmcAI	AGTACT	1 cut(s)	748
Bme1390I	CCNGG	2 cut(s)	350, 756
Bme18I	GGWCC	3 cut(s)	722, 1536, 1555
BmgT120I	GGNCC	6 cut(s)	39, 722, 1536, 1555, 1845, 1846
BmiI	GGNNCC	7 cut(s)	126, 448, 1065, 1538, 1674, 1847, 1979
BmrFI	CCNGG	2 cut(s)	350, 756
BmrI	ACTGGG	2 cut(s)	130, 1534
BmsI	GCATC	3 cut(s)	42, 750, 1852
BmuI	ACTGGG	2 cut(s)	130, 1534
BpiI	GAAGAC	5 cut(s)	114, 120, 253, 398, 861
BpmI	CTGGAG	2 cut(s)	1680, 1967
BpuMI	CCSGG	1 cut(s)	756
BsaBI	GATNNNNATC	2 cut(s)	156, 1273
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	2 cut(s)	755, 1729
BsaWI	WCCGGW	1 cut(s)	340
Bsc4I	CCNNNNNNNGG	3 cut(s)	592, 649, 1682
Bse118I	RCCGGY	1 cut(s)	459
Bse1I	ACTGG	7 cut(s)	125, 464, 932, 1540, 1787, 1976, 1984
Bse3DI	GCAATG	2 cut(s)	640, 688
Bse8I	GATNNNNATC	2 cut(s)	156, 1273
BseBI	CCWGG	1 cut(s)	350
BseDI	CCNNGG	2 cut(s)	755, 1729
BseGI	GGATG	7 cut(s)	205, 217, 349, 643, 658, 765, 1604
BseJI	GATNNNNATC	2 cut(s)	156, 1273
BseLI	CCNNNNNNNGG	3 cut(s)	592, 649, 1682
BseMI	GCAATG	2 cut(s)	640, 688
BseMII	CTCAG	4 cut(s)	310, 971, 1539, 1596
BseNI	ACTGG	7 cut(s)	125, 464, 932, 1540, 1787, 1976, 1984
BseRI	GAGGAG	1 cut(s)	614
BseSI	GKGCMC	2 cut(s)	1322, 1849
BseXI	GCAGC	1 cut(s)	1036
BseYI	CCCAGC	2 cut(s)	382, 431
BshFI	GGCC	7 cut(s)	40, 463, 571, 832, 931, 1728, 1847
BshNI	GGYRCC	3 cut(s)	446, 1063, 1977
BsiHKAI	GWGCWC	1 cut(s)	1322
BsiSI	CCGG	6 cut(s)	206, 341, 460, 519, 755, 932
BslFI	GGGAC	2 cut(s)	569, 1522
BslI	CCNNNNNNNGG	3 cut(s)	592, 649, 1682
BsmAI	GTCTC	1 cut(s)	254
BsmFI	GGGAC	2 cut(s)	569, 1522
BsmI	GAATGC	1 cut(s)	1713
BsnI	GGCC	7 cut(s)	40, 463, 571, 832, 931, 1728, 1847
Bso31I	GGTCTC	1 cut(s)	254
Bsp120I	GGGCCC	1 cut(s)	1845
Bsp1286I	GDGCHC	2 cut(s)	1322, 1849
BspACI	CCGC	5 cut(s)	75, 1625, 1690, 1711, 1843
BspANI	GGCC	7 cut(s)	40, 463, 571, 832, 931, 1728, 1847
BspCNI	CTCAG	4 cut(s)	309, 970, 1540, 1597
BspHI	TCATGA	1 cut(s)	1107
BspLI	GGNNCC	7 cut(s)	126, 448, 1065, 1538, 1674, 1847, 1979
BspMAI	CTGCAG	1 cut(s)	1749
BspMI	ACCTGC	2 cut(s)	523, 1325
BspPI	GGATC	7 cut(s)	119, 132, 181, 539, 1276, 1667, 1680
BspT107I	GGYRCC	3 cut(s)	446, 1063, 1977
BspTI	CTTAAG	1 cut(s)	1991
BspTNI	GGTCTC	1 cut(s)	254
BsrDI	GCAATG	2 cut(s)	640, 688
BsrFI	RCCGGY	1 cut(s)	459
BsrI	ACTGG	7 cut(s)	125, 464, 932, 1540, 1787, 1976, 1984
BssAI	RCCGGY	1 cut(s)	459
BssECI	CCNNGG	2 cut(s)	755, 1729
Bst2UI	CCWGG	1 cut(s)	350
Bst4CI	ACNGT	4 cut(s)	276, 709, 1177, 1231
Bst6I	CTCTTC	2 cut(s)	163, 591
BstAFI	CTTAAG	1 cut(s)	1991
BstAPI	GCANNNNNTGC	1 cut(s)	1962
BstC8I	GCNNGC	4 cut(s)	146, 461, 1563, 1845
BstDEI	CTNAG	5 cut(s)	296, 899, 957, 1548, 1605
BstF5I	GGATG	7 cut(s)	205, 217, 349, 643, 658, 765, 1604
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	2 cut(s)	57, 98
BstMAI	GTCTC	1 cut(s)	254
BstMWI	GCNNNNNNNGC	4 cut(s)	37, 61, 958, 1962
BstNI	CCWGG	1 cut(s)	350
BstNSI	RCATGY	1 cut(s)	1960
BstSCI	CCNGG	2 cut(s)	348, 754
BstSFI	CTRYAG	1 cut(s)	1745
BstSLI	GKGCMC	2 cut(s)	1322, 1849
BstV1I	GCAGC	1 cut(s)	1036
BstV2I	GAAGAC	5 cut(s)	114, 120, 253, 398, 861
BstX2I	RGATCY	4 cut(s)	124, 1268, 1513, 1672
BstXI	CCANNNNNNTGG	1 cut(s)	878
BstYI	RGATCY	4 cut(s)	124, 1268, 1513, 1672
BsuI	GTATCC	2 cut(s)	1244, 1448
BsuRI	GGCC	7 cut(s)	40, 463, 571, 832, 931, 1728, 1847
BtsCI	GGATG	7 cut(s)	205, 217, 349, 643, 658, 765, 1604
BtsIMutI	CAGTG	4 cut(s)	714, 1794, 1857, 1969
BveI	ACCTGC	2 cut(s)	523, 1325
Cac8I	GCNNGC	4 cut(s)	146, 461, 1563, 1845
CaiI	CAGNNNCTG	2 cut(s)	1303, 1793
CciI	TCATGA	1 cut(s)	1107
CfoI	GCGC	2 cut(s)	57, 98
Cfr10I	RCCGGY	1 cut(s)	459
Cfr13I	GGNCC	6 cut(s)	39, 722, 1536, 1555, 1845, 1846
CseI	GACGC	2 cut(s)	926, 1309
Csp6I	GTAC	6 cut(s)	242, 312, 687, 747, 1944, 1978
CviAII	CATG	8 cut(s)	315, 1060, 1108, 1379, 1442, 1448, 1701, 1957
CviQI	GTAC	6 cut(s)	242, 312, 687, 747, 1944, 1978
DdeI	CTNAG	5 cut(s)	296, 899, 957, 1548, 1605
DraI	TTTAAA	1 cut(s)	184
EaeI	YGGCCR	4 cut(s)	461, 830, 929, 1726
Eam1104I	CTCTTC	2 cut(s)	163, 591
EarI	CTCTTC	2 cut(s)	163, 591
EciI	GGCGGA	2 cut(s)	64, 1705
Eco24I	GRGCYC	1 cut(s)	1849
Eco31I	GGTCTC	1 cut(s)	254
Eco32I	GATATC	2 cut(s)	190, 373
Eco47I	GGWCC	3 cut(s)	722, 1536, 1555
Eco57I	CTGAAG	2 cut(s)	392, 1823
EcoO109I	RGGNCCY	1 cut(s)	1846
EcoRI	GAATTC	1 cut(s)	1648
EcoRII	CCWGG	1 cut(s)	348
EcoRV	GATATC	2 cut(s)	190, 373
EcoT38I	GRGCYC	1 cut(s)	1849
FaeI	CATG	8 cut(s)	318, 1063, 1111, 1382, 1445, 1451, 1704, 1960
FaqI	GGGAC	2 cut(s)	569, 1522
FatI	CATG	8 cut(s)	314, 1059, 1107, 1378, 1441, 1447, 1700, 1956
FauI	CCCGC	2 cut(s)	1632, 1836
FauNDI	CATATG	3 cut(s)	1132, 1498, 1723
FbaI	TGATCA	2 cut(s)	157, 1777
Fnu4HI	GCNGC	1 cut(s)	1050
FokI	GGATG	7 cut(s)	212, 224, 356, 630, 665, 772, 1611
FriOI	GRGCYC	1 cut(s)	1849
Fsp4HI	GCNGC	1 cut(s)	1050
FspBI	CTAG	4 cut(s)	237, 368, 1830, 1952
FspI	TGCGCA	1 cut(s)	56
GlaI	GCGC	2 cut(s)	56, 97
GluI	GCNGC	1 cut(s)	1050
GsaI	CCCAGC	2 cut(s)	386, 435
GsuI	CTGGAG	2 cut(s)	1680, 1967
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	7 cut(s)	40, 463, 571, 832, 931, 1728, 1847
HapII	CCGG	6 cut(s)	206, 341, 460, 519, 755, 932
HgaI	GACGC	2 cut(s)	926, 1309
HhaI	GCGC	2 cut(s)	57, 98
Hin1II	CATG	8 cut(s)	318, 1063, 1111, 1382, 1445, 1451, 1704, 1960
Hin6I	GCGC	2 cut(s)	55, 96
HinP1I	GCGC	2 cut(s)	55, 96
HincII	GTYRAC	2 cut(s)	888, 1227
HindII	GTYRAC	2 cut(s)	888, 1227
HinfI	GANTC	7 cut(s)	19, 83, 131, 334, 1100, 1355, 1693
HpaI	GTTAAC	1 cut(s)	888
HpaII	CCGG	6 cut(s)	206, 341, 460, 519, 755, 932
HphI	GGTGA	4 cut(s)	546, 1316, 1349, 1481
Hpy166II	GTNNAC	3 cut(s)	888, 1227, 1320
Hpy188III	TCNNGA	6 cut(s)	128, 410, 491, 1024, 1097, 1108
Hpy8I	GTNNAC	3 cut(s)	888, 1227, 1320
Hpy99I	CGWCG	1 cut(s)	978
HpyAV	CCTTC	4 cut(s)	836, 1546, 1680, 1749
HpyCH4III	ACNGT	4 cut(s)	276, 709, 1177, 1231
HpyCH4IV	ACGT	1 cut(s)	1631
HpyCH4V	TGCA	9 cut(s)	1052, 1320, 1378, 1565, 1589, 1747, 1865, 1889, 1965
HpyF10VI	GCNNNNNNNGC	4 cut(s)	37, 61, 958, 1962
HpyF3I	CTNAG	5 cut(s)	296, 899, 957, 1548, 1605
HpySE526I	ACGT	1 cut(s)	1631
Hsp92II	CATG	8 cut(s)	318, 1063, 1111, 1382, 1445, 1451, 1704, 1960
HspAI	GCGC	2 cut(s)	55, 96
KpnI	GGTACC	1 cut(s)	1981
KroI	GCCGGC	1 cut(s)	459
KroNI	GCCGGC	1 cut(s)	461
Ksp22I	TGATCA	2 cut(s)	157, 1777
KspAI	GTTAAC	1 cut(s)	888
LmnI	GCTCC	2 cut(s)	934, 1191
Lsp1109I	GCAGC	1 cut(s)	1036
LweI	GCATC	3 cut(s)	42, 750, 1852
MaeI	CTAG	4 cut(s)	237, 368, 1830, 1952
MaeII	ACGT	1 cut(s)	1631
MaeIII	GTNAC	6 cut(s)	694, 1259, 1706, 1740, 1789, 2011
MfeI	CAATTG	2 cut(s)	765, 1571
MflI	RGATCY	4 cut(s)	124, 1268, 1513, 1672
MhlI	GDGCHC	2 cut(s)	1322, 1849
MlyI	GAGTC	4 cut(s)	92, 125, 328, 1687
MmeI	TCCRAC	3 cut(s)	304, 895, 1891
MroNI	GCCGGC	1 cut(s)	459
MroXI	GAANNNNTTC	1 cut(s)	1001
MseI	TTAA	7 cut(s)	183, 531, 887, 1217, 1925, 1992, 2062
MslI	CAYNNNNRTG	1 cut(s)	1446
MspA1I	CMGCKG	3 cut(s)	31, 1049, 1843
MspCI	CTTAAG	1 cut(s)	1991
MspI	CCGG	6 cut(s)	206, 341, 460, 519, 755, 932
MspR9I	CCNGG	2 cut(s)	350, 756
MunI	CAATTG	2 cut(s)	765, 1571
Mva1269I	GAATGC	1 cut(s)	1713
MvaI	CCWGG	1 cut(s)	350
MwoI	GCNNNNNNNGC	4 cut(s)	37, 61, 958, 1962
NaeI	GCCGGC	1 cut(s)	461
NciI	CCSGG	1 cut(s)	756
NdeI	CATATG	3 cut(s)	1132, 1498, 1723
NgoMIV	GCCGGC	1 cut(s)	459
NlaIII	CATG	8 cut(s)	318, 1063, 1111, 1382, 1445, 1451, 1704, 1960
NlaIV	GGNNCC	7 cut(s)	126, 448, 1065, 1538, 1674, 1847, 1979
NmeAIII	GCCGAG	1 cut(s)	1754
NmuCI	GTSAC	4 cut(s)	694, 1706, 1789, 2011
NsbI	TGCGCA	1 cut(s)	56
NspI	RCATGY	1 cut(s)	1960
PagI	TCATGA	1 cut(s)	1107
PaqCI	CACCTGC	1 cut(s)	1325
PctI	GAATGC	1 cut(s)	1713
PdiI	GCCGGC	1 cut(s)	461
PdmI	GAANNNNTTC	1 cut(s)	1001
PfeI	GAWTC	3 cut(s)	19, 1100, 1355
PflMI	CCANNNNNTGG	2 cut(s)	649, 1682
PkrI	GCNGC	1 cut(s)	1051
PleI	GAGTC	4 cut(s)	91, 125, 328, 1687
PpsI	GAGTC	4 cut(s)	91, 125, 328, 1687
Psp6I	CCWGG	1 cut(s)	348
PspFI	CCCAGC	2 cut(s)	382, 431
PspGI	CCWGG	1 cut(s)	348
PspN4I	GGNNCC	7 cut(s)	126, 448, 1065, 1538, 1674, 1847, 1979
PspOMI	GGGCCC	1 cut(s)	1845
PspPI	GGNCC	6 cut(s)	39, 722, 1536, 1555, 1845, 1846
PstI	CTGCAG	1 cut(s)	1749
PstNI	CAGNNNCTG	2 cut(s)	1303, 1793
PsuI	RGATCY	4 cut(s)	124, 1268, 1513, 1672
PvuII	CAGCTG	2 cut(s)	31, 1049
RsaI	GTAC	6 cut(s)	243, 313, 688, 748, 1945, 1979
RsaNI	GTAC	6 cut(s)	242, 312, 687, 747, 1944, 1978
RseI	CAYNNNNRTG	1 cut(s)	1446
SaqAI	TTAA	7 cut(s)	183, 531, 887, 1217, 1925, 1992, 2062
SatI	GCNGC	1 cut(s)	1050
Sau96I	GGNCC	6 cut(s)	39, 722, 1536, 1555, 1845, 1846
ScaI	AGTACT	1 cut(s)	748
SchI	GAGTC	4 cut(s)	92, 125, 328, 1687
ScrFI	CCNGG	2 cut(s)	350, 756
SduI	GDGCHC	2 cut(s)	1322, 1849
SfaNI	GCATC	3 cut(s)	42, 750, 1852
SfcI	CTRYAG	1 cut(s)	1745
SinI	GGWCC	3 cut(s)	722, 1536, 1555
SmiMI	CAYNNNNRTG	1 cut(s)	1446
SmlI	CTYRAG	1 cut(s)	1991
SmoI	CTYRAG	1 cut(s)	1991
SsiI	CCGC	5 cut(s)	75, 1625, 1690, 1711, 1843
SspMI	CTAG	4 cut(s)	237, 368, 1830, 1952
StyD4I	CCNGG	2 cut(s)	348, 754
TaaI	ACNGT	4 cut(s)	276, 709, 1177, 1231
TaiI	ACGT	1 cut(s)	1634
TaqI	TCGA	2 cut(s)	511, 1783
TatI	WGTACW	2 cut(s)	746, 1943
TfiI	GAWTC	3 cut(s)	19, 1100, 1355
Tru1I	TTAA	7 cut(s)	183, 531, 887, 1217, 1925, 1992, 2062
Tru9I	TTAA	7 cut(s)	183, 531, 887, 1217, 1925, 1992, 2062
TscAI	CASTG	4 cut(s)	714, 1794, 1864, 1976
TseFI	GTSAC	4 cut(s)	694, 1706, 1789, 2011
TseI	GCWGC	1 cut(s)	1049
Tsp45I	GTSAC	4 cut(s)	694, 1706, 1789, 2011
TspGWI	ACGGA	1 cut(s)	608
TspRI	CASTG	4 cut(s)	714, 1794, 1864, 1976
Van91I	CCANNNNNTGG	2 cut(s)	649, 1682
Vha464I	CTTAAG	1 cut(s)	1991
VneI	GTGCAC	1 cut(s)	1318
VpaK11BI	GGWCC	3 cut(s)	722, 1536, 1555
XapI	RAATTY	6 cut(s)	563, 979, 1383, 1618, 1648, 1769
XceI	RCATGY	1 cut(s)	1960
XcmI	CCANNNNNNNNNTGG	1 cut(s)	471
XmnI	GAANNNNTTC	1 cut(s)	1001
XspI	CTAG	4 cut(s)	237, 368, 1830, 1952
ZrmI	AGTACT	1 cut(s)	748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.