Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004177

Physical Location & Seq

Genomic Coordinates Reverse (-)

33508290 .. 33520852

Gene Structure 12563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013579

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGCTAGCTTCATCATCCAACCAAAGCCAGATTCCGATGAAGCCCAACTCCAAGAATCAGCAACAGCTGTTCTGGCCCAGAGTTGTGATGCGCAAATGGCTCAACATCTCCGCCAACGAGTCCGATTACAGCGCCGATACCGAAGACGAAGACGACTGGGATCCTGACTCCCCAACAAGCCAGCAAGATTTTGGTCAGCGGGGAAGAGGATCAAGGTTTAAAGATATCAAAGAGGATGAGTCTGAGGATGATGACGACCTTGATGATCTTCCTAGAGTACGAAGACGAAAATCAGAGACCTTTAGAACACAGTATATAAATACAAAGGAACTCAGAATATGTGTTGGTACATGGAATGTAGGAGGACAGACTCCACCTGATGACCTGGATATTGATGGTTGGCTAGATATCAATGACCCAGCCGACATCTATGTAATTGGTCTTCAGGAGATCGTGCCACTCAATGCTGGGAATATATTTGGTGCCGAAGATAGCCGGCCAGTTAGTAAGTGGGAAAATGTCATTCGTGAAACGCTGGATAGATTTCGACCTGCTGGCAACAAGGTTAAATCCTTTAGTGATCCTCCGTCACCCTCAAAATTTAGGCCATCTGATGATGTCCCTTATATGGAAGAGGAGATATTAGATGAAAGTGATAGTGATATTGGCAATGAAGTCCATCCATTGGATGACGAACCCAAAGATTTTGGTGTCAGCAATGGTACATCAGTCACAAGCGAAACAGTGAATGTTGATGGTCCTGTTTCTAACTTTACTGATAGTACTAAACCGGGGATGCCAATTGGAGAGGATTTACAGAGGCAACATTCTTCTCCAAAGAGATTAGATAGGTTATATTGCCTTCGGCCAGATAATTGTCCATTAGATGAAGACACTTCTGCTGTCCAACATAATGGCAAGTTAACCAAAACGCTTAGTGGGTCTGAAAGAATTGGTTTGAACTGGCCGGAGCGTCCATTGAACTTGCTATCTCAGCACTTATTAGAGCGACGAAATTCCTTTAGACCAACAAAGTCTTTCAAGTCCTCAAAATCTTTCAGGACACACAATTCTTTCAAGTCAGCTGCAAATGACATGGCACCAGAATTAGCTTTGCTTGGAGAGATTGATCTTGAATCTCTCATGAAACGGGAACGAAGATCATCATATGTAAGGATAGTAAGTAAGCAGATGGTTGGGATTTTCCTAACTGTATGGGTTCGTAGGAGCTTACGTAAACACATTCAGAACTTAAAGGTGTCAACTGTTGGTGTTGGTGTTATGGGATACATTGGTAACAAGGGATCTGTATCTGTGAGTATGTCCATATATCAGACGCTGTTTTGTTTCGTGTGCACTCACCTGACAGCAGGTGAAAGGGAGGTAGATGAATCAAAAAGAAATGCTGATGTGCATGAAATTCATCGGAGAACTCACTTTCATTCGTATTCTGGTATTGGGCTTCCGAAAAGTATCCATGACCATGAAAGAATAATTTGGTTGGGTGATCTAAATTATCGTATCAACTTGTCATATGAGAAAACAAAAGAACTTATCTCCAAAAAGGAGTGGTCCCAGTTGGCTGAGAAGGACCAGCTTGCACGACAATTTAAAAAAGGTCGTGCATTTGATGGATGGTCTGAGGGTGTTTTAAATTTCCCGCCAACGTATAAGTATGAGATGAATTCAGACAAGTATTATGGAGAGGATCCAAAGGGTGGAAGGCGGACTCCAGCATGGTGTGACCGCATTCTTTCATATGGCCGAGGAATGAGGTTACTGCAGTATAGAAGTACTGAACATAAATTTTCTGATCATCGACCAGTGACTGCTACTTATATGGCAGAGGTTGAGGTTTTTTCTGCTAGGAGGCTTCAGCGGGCCCTCACATTCACTGATGCAGAGATTGAAAATGAGGAAATTGCAACGGATATGGGTATTGATATTGCAATGAACAACTTAAAATTGGAACAGGGTATATCTGATTGGGAACTTGAGTGGAGTCATAACATAGTTCAGAGTCTTGTAGCTTTTTTCTTGGTCACTAAGCAAAGATTTGAGAAGATGAAAAACGAAATGAAAAGACATCCAATAGAGGATATGCAGGACTGCTCTGGACAATCTCATTTCCAGCAACAGGACTTGATTGACTTGAATCCGAACTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0004445 GO:0005975 GO:0006066 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009791 GO:0009845 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0030258 GO:0032501 GO:0032502 GO:0032957 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0043647 GO:0044237 GO:0044238 GO:0044255 GO:0044262 GO:0044281 GO:0044282 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046486 GO:0046488 GO:0046838 GO:0046839 GO:0046855 GO:0046856 GO:0048856 GO:0052745 GO:0052866 GO:0071545 GO:0071704 GO:0090351 GO:0106019 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko03010 ko04070 map00562 map01100 map03010 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

723

Amino Acids

82.87

Weight (kDa)

5.59

Isoelectric Point (pI)

51.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	116 - 182	4.2e-07	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	378 - 611	4.3e-67	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71710 AT1G71710
fragaria_vesca	FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960
malus_domestica	MD05G1034300.v1.1 MD10G1036300.v1.1
prunus_persica	Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1
pyrus_communis	pycom05g02480 pycom10g02470
rosa_chinensis	RchiOBHm_Chr6g0274091
rosa_laevigata	RLG00000013579
rosa_multiflora	Rmu_co8515147.1_g000001 Rmu_ssc0000413.1_g000006
rosa_roxburghii	Rroxscaffold_7G00194670
rosa_rugosa	Rorug06G0078500 Rorug06G0078500 Rorug06G0078500
rosa_samantha	Rh6AG194400 Rh6BG198400 Rh6CG198300 Rh6DG189800
rosa_wichuraiana	Rw0G007940 Rw6G016940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1361
Acc16I	TGCGCA	1 cut(s)	92
Acc36I	ACCTGC	2 cut(s)	559, 1361
AccB1I	GGYRCC	2 cut(s)	482, 1099
AccB7I	CCANNNNNTGG	2 cut(s)	685, 1718
AciI	CCGC	6 cut(s)	111, 199, 1661, 1726, 1747, 1879
AclWI	GGATC	7 cut(s)	155, 168, 217, 575, 1312, 1703, 1716
AcoI	YGGCCR	4 cut(s)	497, 866, 965, 1762
AcsI	RAATTY	6 cut(s)	599, 1015, 1419, 1654, 1684, 1805
AcuI	CTGAAG	2 cut(s)	428, 1859
AfaI	GTAC	5 cut(s)	279, 349, 724, 784, 1795
AfiI	CCNNNNNNNGG	4 cut(s)	628, 685, 1718, 2137
AgsI	TTSAA	7 cut(s)	961, 982, 1042, 1078, 1136, 1910, 2155
AjnI	CCWGG	1 cut(s)	384
AjuI	GAANNNNNNNTTGG	2 cut(s)	15, 47
AluBI	AGCT	7 cut(s)	8, 67, 1085, 1112, 1230, 1597, 2030
AluI	AGCT	7 cut(s)	8, 67, 1085, 1112, 1230, 1597, 2030
Alw21I	GWGCWC	1 cut(s)	1358
Alw26I	GTCTC	1 cut(s)	290
Alw44I	GTGCAC	1 cut(s)	1354
AlwI	GGATC	7 cut(s)	155, 168, 217, 575, 1312, 1703, 1716
AlwNI	CAGNNNCTG	2 cut(s)	1339, 1829
AoxI	GGCC	7 cut(s)	74, 497, 605, 866, 965, 1762, 1881
ApaI	GGGCCC	1 cut(s)	1885
ApaLI	GTGCAC	1 cut(s)	1354
ApeKI	GCWGC	1 cut(s)	1085
ApoI	RAATTY	6 cut(s)	599, 1015, 1419, 1654, 1684, 1805
AspLEI	GCGC	2 cut(s)	93, 134
AspS9I	GGNCC	6 cut(s)	75, 758, 1572, 1591, 1881, 1882
AsuC2I	CCSGG	1 cut(s)	792
AsuHPI	GGTGA	4 cut(s)	582, 1352, 1385, 1517
AsuNHI	GCTAGC	1 cut(s)	4
AvaII	GGWCC	3 cut(s)	758, 1572, 1591
BaeGI	GKGCMC	2 cut(s)	1358, 1885
BaeI	ACNNNNGTAYC	4 cut(s)	714, 747, 1279, 1312
BamHI	GGATCC	2 cut(s)	160, 1708
BanI	GGYRCC	2 cut(s)	482, 1099
BanII	GRGCYC	1 cut(s)	1885
BarI	GAAGNNNNNNTAC	2 cut(s)	426, 458
BbsI	GAAGAC	5 cut(s)	150, 156, 289, 434, 897
Bbv12I	GWGCWC	1 cut(s)	1358
BbvI	GCAGC	1 cut(s)	1072
BccI	CCATC	7 cut(s)	389, 616, 687, 749, 1186, 1625, 1629
BciT130I	CCWGG	1 cut(s)	386
BciVI	GTATCC	2 cut(s)	1280, 1484
BclI	TGATCA	1 cut(s)	1813
BcnI	CCSGG	1 cut(s)	792
BcoDI	GTCTC	1 cut(s)	290
BfaI	CTAG	4 cut(s)	5, 273, 404, 1866
BfmI	CTRYAG	1 cut(s)	1781
BfoI	RGCGCY	1 cut(s)	135
BfuAI	ACCTGC	2 cut(s)	559, 1361
BfuI	GTATCC	2 cut(s)	1280, 1484
BisI	GCNGC	1 cut(s)	1086
BlsI	GCNGC	1 cut(s)	1087
BmcAI	AGTACT	2 cut(s)	784, 1795
Bme1390I	CCNGG	2 cut(s)	386, 792
Bme18I	GGWCC	3 cut(s)	758, 1572, 1591
BmgT120I	GGNCC	6 cut(s)	75, 758, 1572, 1591, 1881, 1882
BmiI	GGNNCC	6 cut(s)	162, 484, 1101, 1574, 1710, 1883
BmrFI	CCNGG	2 cut(s)	386, 792
BmrI	ACTGGG	2 cut(s)	166, 1570
BmsI	GCATC	3 cut(s)	78, 786, 1888
BmtI	GCTAGC	1 cut(s)	8
BmuI	ACTGGG	2 cut(s)	166, 1570
BpiI	GAAGAC	5 cut(s)	150, 156, 289, 434, 897
BpmI	CTGGAG	1 cut(s)	1716
BpuEI	CTTGAG	1 cut(s)	2015
BpuMI	CCSGG	1 cut(s)	792
BsaAI	YACGTR	1 cut(s)	1235
BsaBI	GATNNNNATC	1 cut(s)	1309
BsaI	GGTCTC	1 cut(s)	290
BsaJI	CCNNGG	2 cut(s)	791, 1765
BsaXI	ACNNNNNCTCC	2 cut(s)	1219, 1249
Bsc4I	CCNNNNNNNGG	4 cut(s)	628, 685, 1718, 2137
Bse118I	RCCGGY	1 cut(s)	495
Bse1I	ACTGG	5 cut(s)	161, 500, 968, 1576, 1823
Bse3DI	GCAATG	3 cut(s)	676, 724, 1956
Bse8I	GATNNNNATC	1 cut(s)	1309
BseBI	CCWGG	1 cut(s)	386
BseDI	CCNNGG	2 cut(s)	791, 1765
BseGI	GGATG	8 cut(s)	14, 241, 253, 679, 694, 801, 1640, 2086
BseJI	GATNNNNATC	1 cut(s)	1309
BseLI	CCNNNNNNNGG	4 cut(s)	628, 685, 1718, 2137
BseMI	GCAATG	3 cut(s)	676, 724, 1956
BseMII	CTCAG	5 cut(s)	234, 346, 1007, 1575, 1632
BseNI	ACTGG	5 cut(s)	161, 500, 968, 1576, 1823
BseRI	GAGGAG	1 cut(s)	650
BseSI	GKGCMC	2 cut(s)	1358, 1885
BseXI	GCAGC	1 cut(s)	1072
BseYI	CCCAGC	2 cut(s)	418, 467
BshFI	GGCC	7 cut(s)	76, 499, 607, 868, 967, 1764, 1883
BshNI	GGYRCC	2 cut(s)	482, 1099
BsiHKAI	GWGCWC	1 cut(s)	1358
BsiSI	CCGG	3 cut(s)	496, 791, 968
BslFI	GGGAC	2 cut(s)	605, 1558
BslI	CCNNNNNNNGG	4 cut(s)	628, 685, 1718, 2137
BsmAI	GTCTC	1 cut(s)	290
BsmFI	GGGAC	2 cut(s)	605, 1558
BsmI	GAATGC	1 cut(s)	1749
BsnI	GGCC	7 cut(s)	76, 499, 607, 868, 967, 1764, 1883
Bso31I	GGTCTC	1 cut(s)	290
Bsp120I	GGGCCC	1 cut(s)	1881
Bsp1286I	GDGCHC	2 cut(s)	1358, 1885
BspACI	CCGC	6 cut(s)	111, 199, 1661, 1726, 1747, 1879
BspANI	GGCC	7 cut(s)	76, 499, 607, 868, 967, 1764, 1883
BspCNI	CTCAG	5 cut(s)	235, 345, 1006, 1576, 1633
BspHI	TCATGA	2 cut(s)	1143, 2165
BspLI	GGNNCC	6 cut(s)	162, 484, 1101, 1574, 1710, 1883
BspMAI	CTGCAG	1 cut(s)	1785
BspMI	ACCTGC	2 cut(s)	559, 1361
BspOI	GCTAGC	1 cut(s)	8
BspPI	GGATC	7 cut(s)	155, 168, 217, 575, 1312, 1703, 1716
BspT107I	GGYRCC	2 cut(s)	482, 1099
BspTNI	GGTCTC	1 cut(s)	290
BsrDI	GCAATG	3 cut(s)	676, 724, 1956
BsrFI	RCCGGY	1 cut(s)	495
BsrI	ACTGG	5 cut(s)	161, 500, 968, 1576, 1823
BssAI	RCCGGY	1 cut(s)	495
BssECI	CCNNGG	2 cut(s)	791, 1765
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	4 cut(s)	312, 745, 1213, 1267
Bst6I	CTCTTC	2 cut(s)	199, 627
BstBAI	YACGTR	1 cut(s)	1235
BstC8I	GCNNGC	6 cut(s)	6, 182, 497, 556, 1599, 1881
BstDEI	CTNAG	7 cut(s)	243, 332, 935, 993, 1584, 1641, 2046
BstF5I	GGATG	8 cut(s)	14, 241, 253, 679, 694, 801, 1640, 2086
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	2 cut(s)	93, 134
BstMAI	GTCTC	1 cut(s)	290
BstMWI	GCNNNNNNNGC	3 cut(s)	73, 97, 994
BstNI	CCWGG	1 cut(s)	386
BstSCI	CCNGG	2 cut(s)	384, 790
BstSFI	CTRYAG	1 cut(s)	1781
BstSLI	GKGCMC	2 cut(s)	1358, 1885
BstSNI	TACGTA	1 cut(s)	1235
BstV1I	GCAGC	1 cut(s)	1072
BstV2I	GAAGAC	5 cut(s)	150, 156, 289, 434, 897
BstX2I	RGATCY	3 cut(s)	160, 1304, 1708
BstXI	CCANNNNNNTGG	1 cut(s)	914
BstYI	RGATCY	3 cut(s)	160, 1304, 1708
BsuI	GTATCC	2 cut(s)	1280, 1484
BsuRI	GGCC	7 cut(s)	76, 499, 607, 868, 967, 1764, 1883
BtsCI	GGATG	8 cut(s)	14, 241, 253, 679, 694, 801, 1640, 2086
BtsIMutI	CAGTG	3 cut(s)	750, 1830, 1893
BveI	ACCTGC	2 cut(s)	559, 1361
Cac8I	GCNNGC	6 cut(s)	6, 182, 497, 556, 1599, 1881
CaiI	CAGNNNCTG	2 cut(s)	1339, 1829
CciI	TCATGA	2 cut(s)	1143, 2165
CfoI	GCGC	2 cut(s)	93, 134
Cfr10I	RCCGGY	1 cut(s)	495
Cfr13I	GGNCC	6 cut(s)	75, 758, 1572, 1591, 1881, 1882
CseI	GACGC	2 cut(s)	962, 1345
Csp6I	GTAC	5 cut(s)	278, 348, 723, 783, 1794
CviAII	CATG	8 cut(s)	351, 1096, 1144, 1415, 1478, 1484, 1737, 2166
CviQI	GTAC	5 cut(s)	278, 348, 723, 783, 1794
DdeI	CTNAG	7 cut(s)	243, 332, 935, 993, 1584, 1641, 2046
DraI	TTTAAA	3 cut(s)	220, 1612, 1653
EaeI	YGGCCR	4 cut(s)	497, 866, 965, 1762
Eam1104I	CTCTTC	2 cut(s)	199, 627
EarI	CTCTTC	2 cut(s)	199, 627
EciI	GGCGGA	2 cut(s)	100, 1741
Eco105I	TACGTA	1 cut(s)	1235
Eco24I	GRGCYC	1 cut(s)	1885
Eco31I	GGTCTC	1 cut(s)	290
Eco32I	GATATC	2 cut(s)	226, 409
Eco47I	GGWCC	3 cut(s)	758, 1572, 1591
Eco57I	CTGAAG	2 cut(s)	428, 1859
EcoO109I	RGGNCCY	1 cut(s)	1882
EcoRI	GAATTC	1 cut(s)	1684
EcoRII	CCWGG	1 cut(s)	384
EcoRV	GATATC	2 cut(s)	226, 409
EcoT38I	GRGCYC	1 cut(s)	1885
FaeI	CATG	8 cut(s)	354, 1099, 1147, 1418, 1481, 1487, 1740, 2169
FaqI	GGGAC	2 cut(s)	605, 1558
FatI	CATG	8 cut(s)	350, 1095, 1143, 1414, 1477, 1483, 1736, 2165
FauI	CCCGC	3 cut(s)	192, 1668, 1872
FauNDI	CATATG	3 cut(s)	1168, 1534, 1759
FbaI	TGATCA	1 cut(s)	1813
Fnu4HI	GCNGC	1 cut(s)	1086
FokI	GGATG	7 cut(s)	248, 260, 666, 701, 808, 1647, 2073
FriOI	GRGCYC	1 cut(s)	1885
Fsp4HI	GCNGC	1 cut(s)	1086
FspBI	CTAG	4 cut(s)	5, 273, 404, 1866
FspI	TGCGCA	1 cut(s)	92
GlaI	GCGC	2 cut(s)	92, 133
GluI	GCNGC	1 cut(s)	1086
GsaI	CCCAGC	2 cut(s)	422, 471
GsuI	CTGGAG	1 cut(s)	1716
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	7 cut(s)	76, 499, 607, 868, 967, 1764, 1883
HapII	CCGG	3 cut(s)	496, 791, 968
HgaI	GACGC	2 cut(s)	962, 1345
HhaI	GCGC	2 cut(s)	93, 134
Hin1II	CATG	8 cut(s)	354, 1099, 1147, 1418, 1481, 1487, 1740, 2169
Hin6I	GCGC	2 cut(s)	91, 132
HinP1I	GCGC	2 cut(s)	91, 132
HincII	GTYRAC	2 cut(s)	924, 1263
HindII	GTYRAC	2 cut(s)	924, 1263
HpaI	GTTAAC	1 cut(s)	924
HpaII	CCGG	3 cut(s)	496, 791, 968
HphI	GGTGA	4 cut(s)	582, 1352, 1385, 1517
Hpy166II	GTNNAC	4 cut(s)	924, 1238, 1263, 1356
Hpy188III	TCNNGA	8 cut(s)	164, 446, 527, 1060, 1133, 1144, 2115, 2166
Hpy8I	GTNNAC	4 cut(s)	924, 1238, 1263, 1356
Hpy99I	CGWCG	1 cut(s)	1014
HpyAV	CCTTC	3 cut(s)	872, 1582, 1716
HpyCH4III	ACNGT	4 cut(s)	312, 745, 1213, 1267
HpyCH4IV	ACGT	2 cut(s)	1234, 1667
HpyF10VI	GCNNNNNNNGC	3 cut(s)	73, 97, 994
HpyF3I	CTNAG	7 cut(s)	243, 332, 935, 993, 1584, 1641, 2046
HpySE526I	ACGT	2 cut(s)	1234, 1667
Hsp92II	CATG	8 cut(s)	354, 1099, 1147, 1418, 1481, 1487, 1740, 2169
HspAI	GCGC	2 cut(s)	91, 132
KroI	GCCGGC	1 cut(s)	495
KroNI	GCCGGC	1 cut(s)	497
Ksp22I	TGATCA	1 cut(s)	1813
KspAI	GTTAAC	1 cut(s)	924
LmnI	GCTCC	2 cut(s)	970, 1227
Lsp1109I	GCAGC	1 cut(s)	1072
LweI	GCATC	3 cut(s)	78, 786, 1888
MaeI	CTAG	4 cut(s)	5, 273, 404, 1866
MaeII	ACGT	2 cut(s)	1234, 1667
MaeIII	GTNAC	7 cut(s)	588, 730, 1295, 1742, 1776, 1825, 2041
MfeI	CAATTG	1 cut(s)	801
MflI	RGATCY	3 cut(s)	160, 1304, 1708
MhlI	GDGCHC	2 cut(s)	1358, 1885
MlyI	GAGTC	7 cut(s)	128, 161, 248, 364, 1723, 2011, 2029
MmeI	TCCRAC	2 cut(s)	42, 931
MroNI	GCCGGC	1 cut(s)	495
MseI	TTAA	7 cut(s)	219, 567, 923, 1253, 1611, 1652, 1961
MslI	CAYNNNNRTG	1 cut(s)	1482
MspA1I	CMGCKG	4 cut(s)	67, 199, 1085, 1879
MspI	CCGG	3 cut(s)	496, 791, 968
MspR9I	CCNGG	2 cut(s)	386, 792
MunI	CAATTG	1 cut(s)	801
Mva1269I	GAATGC	1 cut(s)	1749
MvaI	CCWGG	1 cut(s)	386
MwoI	GCNNNNNNNGC	3 cut(s)	73, 97, 994
NaeI	GCCGGC	1 cut(s)	497
NciI	CCSGG	1 cut(s)	792
NdeI	CATATG	3 cut(s)	1168, 1534, 1759
NgoMIV	GCCGGC	1 cut(s)	495
NheI	GCTAGC	1 cut(s)	4
NlaIII	CATG	8 cut(s)	354, 1099, 1147, 1418, 1481, 1487, 1740, 2169
NlaIV	GGNNCC	6 cut(s)	162, 484, 1101, 1574, 1710, 1883
NmeAIII	GCCGAG	1 cut(s)	1790
NmuCI	GTSAC	5 cut(s)	588, 730, 1742, 1825, 2041
NsbI	TGCGCA	1 cut(s)	92
PagI	TCATGA	2 cut(s)	1143, 2165
PaqCI	CACCTGC	1 cut(s)	1361
PctI	GAATGC	1 cut(s)	1749
PdiI	GCCGGC	1 cut(s)	497
PfeI	GAWTC	5 cut(s)	31, 55, 1136, 1391, 2155
PflMI	CCANNNNNTGG	2 cut(s)	685, 1718
PkrI	GCNGC	1 cut(s)	1087
PleI	GAGTC	7 cut(s)	127, 161, 247, 364, 1723, 2010, 2028
PpsI	GAGTC	7 cut(s)	127, 161, 247, 364, 1723, 2010, 2028
Ppu21I	YACGTR	1 cut(s)	1235
Psp6I	CCWGG	1 cut(s)	384
PspFI	CCCAGC	2 cut(s)	418, 467
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	6 cut(s)	162, 484, 1101, 1574, 1710, 1883
PspOMI	GGGCCC	1 cut(s)	1881
PspPI	GGNCC	6 cut(s)	75, 758, 1572, 1591, 1881, 1882
PstI	CTGCAG	1 cut(s)	1785
PstNI	CAGNNNCTG	2 cut(s)	1339, 1829
PsuI	RGATCY	3 cut(s)	160, 1304, 1708
PvuII	CAGCTG	2 cut(s)	67, 1085
RsaI	GTAC	5 cut(s)	279, 349, 724, 784, 1795
RsaNI	GTAC	5 cut(s)	278, 348, 723, 783, 1794
RseI	CAYNNNNRTG	1 cut(s)	1482
SaqAI	TTAA	7 cut(s)	219, 567, 923, 1253, 1611, 1652, 1961
SatI	GCNGC	1 cut(s)	1086
Sau96I	GGNCC	6 cut(s)	75, 758, 1572, 1591, 1881, 1882
ScaI	AGTACT	2 cut(s)	784, 1795
SchI	GAGTC	7 cut(s)	128, 161, 248, 364, 1723, 2011, 2029
ScrFI	CCNGG	2 cut(s)	386, 792
SduI	GDGCHC	2 cut(s)	1358, 1885
SfaNI	GCATC	3 cut(s)	78, 786, 1888
SfcI	CTRYAG	1 cut(s)	1781
SinI	GGWCC	3 cut(s)	758, 1572, 1591
SmiMI	CAYNNNNRTG	1 cut(s)	1482
SmlI	CTYRAG	1 cut(s)	1994
SmoI	CTYRAG	1 cut(s)	1994
SnaBI	TACGTA	1 cut(s)	1235
SsiI	CCGC	6 cut(s)	111, 199, 1661, 1726, 1747, 1879
SspMI	CTAG	4 cut(s)	5, 273, 404, 1866
StyD4I	CCNGG	2 cut(s)	384, 790
TaaI	ACNGT	4 cut(s)	312, 745, 1213, 1267
TaiI	ACGT	2 cut(s)	1237, 1670
TaqI	TCGA	2 cut(s)	547, 1819
TatI	WGTACW	2 cut(s)	782, 1793
TfiI	GAWTC	5 cut(s)	31, 55, 1136, 1391, 2155
Tru1I	TTAA	7 cut(s)	219, 567, 923, 1253, 1611, 1652, 1961
Tru9I	TTAA	7 cut(s)	219, 567, 923, 1253, 1611, 1652, 1961
TscAI	CASTG	3 cut(s)	750, 1830, 1900
TseFI	GTSAC	5 cut(s)	588, 730, 1742, 1825, 2041
TseI	GCWGC	1 cut(s)	1085
Tsp45I	GTSAC	5 cut(s)	588, 730, 1742, 1825, 2041
TspGWI	ACGGA	2 cut(s)	576, 1943
TspRI	CASTG	3 cut(s)	750, 1830, 1900
Van91I	CCANNNNNTGG	2 cut(s)	685, 1718
VneI	GTGCAC	1 cut(s)	1354
VpaK11BI	GGWCC	3 cut(s)	758, 1572, 1591
XapI	RAATTY	6 cut(s)	599, 1015, 1419, 1654, 1684, 1805
XcmI	CCANNNNNNNNNTGG	2 cut(s)	188, 507
XspI	CTAG	4 cut(s)	5, 273, 404, 1866
ZrmI	AGTACT	2 cut(s)	784, 1795

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.