Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004177

Physical Location & Seq

Genomic Coordinates Reverse (-)

4356130 .. 4366574

Gene Structure 10445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G042000.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGCATTCTGAATCACAGATGAAGCCCCAGTCAAAGAACCAGCAGCAGAGGAGTTGGGCTGAAATGTGTTGTTTGGATTGGTCGTGCCTACAGCTCTTCTGGCCCAGAGTCGTCATGCGCAAATGGCTCAACATCTCCGGCAAAGAATCCGATTACAGCGCCGACACCGACGCCGATTCCGACTGTGATGCCGACTCCGATACCCAAGAGTTTCCTCAACGGGGAAGAGAATCAAGGTTTAAAGACATTAAGGAAGATGAGTCTGAGAGTGATGATGCTAGTGAAGCGCTTCCAAGGGTACGAAGACGAAAGTCAGAGACGTTCAGGGCACAGTATATAAACACTAAGGAATTGAGAGTATGTGCTACAACATGGAATGTCGGAGGAGAAATTCCACCTGATGACTTGGATATTGATGGTTGGCTAGATATTAATGAGCCAGCTGACTTTTATGTGATTGGCCTTCAGGAGATTGTACCCTTAAATGCTGGAAATATCTTTGGTGCTGAAGATAGGCGCCCAATCACTAAGTGGGAAACAATTATTCGTGAAGCACTGGATAGAGTTCGACCTGCGGCAAGTAAGGTTAAATCCTTTAGTGATCCTCCATCTCCATCCAAGTATAAGCCATCTGGTGATGTCCCTGATATAGAAGAGGAGATGTTACTCCAAAGTGATAGTGATGTTGGTGAAGAAGTGCATCCATTGGATGACGAACCCAAAGATTTTGGTGACAGCAACGATACATCAATCACTAGTGAAATAGTGAATGTTGATTCTCGAGTTCCAGACTTTAGTGATAGTAGCAAGCCACGCATGCCAATTGGCCAGGATTTACAAAGGCAAAGTTCTTCTCCAAAGAGATTAGATAGGTTATATTGCTTGAGGACCGATGATTGTTCATTAGATGAAGAAACTTCTAGTATCCAACAAAATCGAAAGTTAACCAAAATGCTTAGTGGGTCTGAAAGGATTGGTTTGAGCTGGCCGGAGCCTCCATTAAACTTGCTATCTCAGCACTTGTTAGACAGACGAAATTCCTTTCGAACAATGAAGTCTTTCAAGTCCTCTAAGTCTTTCAGAACCCACAATTCTTTCAAGTCAGCTACGAATGACGTGACACCAGAAATAGCTCTGCTTGCAGAGATTGATCTTGAGTCTCTAATGAAACGGAAAAGAAGATCATCATATGTAAGGATTGTAAGTAAGCAGATGGTTGGGATTTTCCTCACTGTATGGGTTCGTAGGAGCTTGCGTAAACATATTCAGAACGTAAAGGTGTCTACTGTTGGTGTTGGTGTCATGGGATATATTGGTAACAAGGGATCTATATCTGTCAGCATGTCAGTGTATCAGACGTTTTTTTGTTTTGTGTGCACTCACCTGACAGCAGGTGAGAAAGATGGAGATGAAATAAAAAGGAATGCTGATGTGCATGAAATACATCGAAGAACTCACTTTCATTCATTTTCTGATATTGGACTTCCCAGAAGTATCTATGATCATGAAAAAATAATTTGGTTGGGCGATCTAAATTATCGCCTTAACTTGTCATATGAAAAAACACGAGAACTTATCTCCAAAAAGGAGTGGTCCAAGTTGTTTGAGAACGACCAGCTTGCACGACAATTTAAGAAAGGTCGTCCATTTGATGGATGGTCTGAGGGTGTTCTGAAGTTTCCACCAACATATAAATATGAGGCTAATTCAGAGAAGTACTACGGTGATGATCCGAAGACTGGGAGGCGGACTCCAGCATGGTGTGACCGCATTCTTTCTTATGGCCGAGGAATGAGGTTACTGAGCTATAGAAGGGCTGAACTTAAACTTTCTGATCATCGACCAGTAACTGCCACATATATGGCCGAGGTTGAGGTGTTCTCTTCTAGGAAGCTTCAACGGGCCCTCACATTCACTGATGCAGAGATTGAAAATGAGGAAATCTCAATGGATATGGGTATTGATGTTGGAATGAACTGCTTAAAATTGGAACAAGATATTTCTGATTGGGAGCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0004445 GO:0005975 GO:0006066 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009791 GO:0009845 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0030258 GO:0032501 GO:0032502 GO:0032957 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0043647 GO:0044237 GO:0044238 GO:0044255 GO:0044262 GO:0044281 GO:0044282 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046486 GO:0046488 GO:0046838 GO:0046839 GO:0046855 GO:0046856 GO:0048856 GO:0052745 GO:0052866 GO:0071545 GO:0071704 GO:0090351 GO:0106019 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko03010 ko04070 map00562 map01100 map03010 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

673

Amino Acids

77.41

Weight (kDa)

5.76

Isoelectric Point (pI)

56.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71710 AT1G71710
fragaria_vesca	FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960
malus_domestica	MD05G1034300.v1.1 MD10G1036300.v1.1
prunus_persica	Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1
pyrus_communis	pycom05g02480 pycom10g02470
rosa_chinensis	RchiOBHm_Chr6g0274091
rosa_laevigata	RLG00000013579
rosa_multiflora	Rmu_co8515147.1_g000001 Rmu_ssc0000413.1_g000006
rosa_roxburghii	Rroxscaffold_7G00194670
rosa_rugosa	Rorug06G0078500 Rorug06G0078500 Rorug06G0078500
rosa_samantha	Rh6AG194400 Rh6BG198400 Rh6CG198300 Rh6DG189800
rosa_wichuraiana	Rw0G007940 Rw6G016940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1382
Acc16I	TGCGCA	1 cut(s)	119
Acc36I	ACCTGC	2 cut(s)	580, 1382
AccB1I	GGYRCC	1 cut(s)	516
AccB7I	CCANNNNNTGG	1 cut(s)	1652
AccI	GTMKAC	1 cut(s)	1283
AciI	CCGC	3 cut(s)	575, 1747, 1768
AclWI	GGATC	3 cut(s)	596, 1333, 1724
AcoI	YGGCCR	4 cut(s)	826, 986, 1783, 1863
AcsI	RAATTY	2 cut(s)	390, 1036
AcuI	CTGAAG	3 cut(s)	449, 528, 1694
AcyI	GRCGYC	2 cut(s)	171, 517
AdeI	CACNNNGTG	1 cut(s)	531
AfaI	GTAC	3 cut(s)	300, 477, 1718
AfeI	AGCGCT	1 cut(s)	288
AfiI	CCNNNNNNNGG	3 cut(s)	221, 1652, 1739
AgsI	TTSAA	4 cut(s)	1063, 1099, 1898, 1931
AhlI	ACTAGT	1 cut(s)	755
AjiI	CACGTC	1 cut(s)	1117
AjnI	CCWGG	1 cut(s)	828
AluBI	AGCT	9 cut(s)	94, 443, 984, 1106, 1133, 1251, 1618, 1806, 1894
AluI	AGCT	9 cut(s)	94, 443, 984, 1106, 1133, 1251, 1618, 1806, 1894
Alw21I	GWGCWC	1 cut(s)	1379
Alw26I	GTCTC	2 cut(s)	311, 1164
Alw44I	GTGCAC	1 cut(s)	1375
AlwI	GGATC	3 cut(s)	596, 1333, 1724
AlwNI	CAGNNNCTG	1 cut(s)	1850
Ama87I	CYCGRG	1 cut(s)	780
Aor51HI	AGCGCT	1 cut(s)	288
AoxI	GGCC	7 cut(s)	101, 460, 826, 986, 1783, 1863, 1902
ApaI	GGGCCC	1 cut(s)	1906
ApaLI	GTGCAC	1 cut(s)	1375
ApeKI	GCWGC	1 cut(s)	43
ApoI	RAATTY	2 cut(s)	390, 1036
AseI	ATTAAT	1 cut(s)	432
Asp700I	GAANNNNTTC	2 cut(s)	288, 1058
AspLEI	GCGC	4 cut(s)	120, 161, 289, 519
AspS9I	GGNCC	5 cut(s)	102, 888, 1593, 1902, 1903
AsuHPI	GGTGA	6 cut(s)	647, 701, 743, 1373, 1406, 1736
AsuII	TTCGAA	1 cut(s)	1045
AvaI	CYCGRG	1 cut(s)	780
AvaII	GGWCC	2 cut(s)	888, 1593
BaeGI	GKGCMC	3 cut(s)	331, 1379, 1906
BalI	TGGCCA	1 cut(s)	828
BanI	GGYRCC	1 cut(s)	516
BanII	GRGCYC	1 cut(s)	1906
BauI	CACGAG	1 cut(s)	1566
BbsI	GAAGAC	2 cut(s)	310, 1742
Bbv12I	GWGCWC	1 cut(s)	1379
BbvI	GCAGC	1 cut(s)	55
BccI	CCATC	8 cut(s)	410, 616, 622, 637, 1207, 1397, 1646, 1650
BcgI	CGANNNNNNTGC	4 cut(s)	170, 204, 1601, 1635
BciT130I	CCWGG	1 cut(s)	830
BciVI	GTATCC	1 cut(s)	935
BclI	TGATCA	2 cut(s)	1501, 1834
BcoDI	GTCTC	2 cut(s)	311, 1164
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	5 cut(s)	279, 425, 756, 921, 1887
BfmI	CTRYAG	2 cut(s)	89, 1807
BfoI	RGCGCY	3 cut(s)	162, 290, 520
BfuAI	ACCTGC	2 cut(s)	580, 1382
BfuI	GTATCC	1 cut(s)	935
BisI	GCNGC	2 cut(s)	44, 576
BlsI	GCNGC	2 cut(s)	45, 577
BmcAI	AGTACT	1 cut(s)	1718
Bme1390I	CCNGG	1 cut(s)	830
Bme18I	GGWCC	2 cut(s)	888, 1593
BmeT110I	CYCGRG	1 cut(s)	780
BmgBI	CACGTC	1 cut(s)	1117
BmgT120I	GGNCC	5 cut(s)	102, 888, 1593, 1902, 1903
BmiI	GGNNCC	3 cut(s)	518, 993, 1904
BmrFI	CCNGG	1 cut(s)	830
BmrI	ACTGGG	2 cut(s)	22, 1749
BmsI	GCATC	4 cut(s)	178, 265, 709, 1909
BmuI	ACTGGG	2 cut(s)	22, 1749
BoxI	GACNNNNGTC	1 cut(s)	310
BpiI	GAAGAC	2 cut(s)	310, 1742
BplI	GAGNNNNNCTC	6 cut(s)	1735, 1767, 1865, 1897, 1928, 1960
BpmI	CTGGAG	1 cut(s)	1737
Bpu14I	TTCGAA	1 cut(s)	1045
BpuEI	CTTGAG	2 cut(s)	904, 1175
BsaBI	GATNNNNATC	1 cut(s)	1330
BsaHI	GRCGYC	2 cut(s)	171, 517
BsaJI	CCNNGG	3 cut(s)	293, 1786, 1866
BsaXI	ACNNNNNCTCC	2 cut(s)	1240, 1270
Bsc4I	CCNNNNNNNGG	3 cut(s)	221, 1652, 1739
Bse1I	ACTGG	4 cut(s)	28, 561, 1744, 1844
Bse8I	GATNNNNATC	1 cut(s)	1330
BseBI	CCWGG	1 cut(s)	830
BseDI	CCNNGG	3 cut(s)	293, 1786, 1866
BseGI	GGATG	4 cut(s)	614, 700, 715, 1661
BseJI	GATNNNNATC	1 cut(s)	1330
BseLI	CCNNNNNNNGG	3 cut(s)	221, 1652, 1739
BseMII	CTCAG	4 cut(s)	255, 1028, 1653, 1793
BseNI	ACTGG	4 cut(s)	28, 561, 1744, 1844
BseRI	GAGGAG	3 cut(s)	64, 399, 671
BseSI	GKGCMC	3 cut(s)	331, 1379, 1906
BseXI	GCAGC	1 cut(s)	55
BshFI	GGCC	7 cut(s)	103, 462, 828, 988, 1785, 1865, 1904
BshNI	GGYRCC	1 cut(s)	516
BsiHKAI	GWGCWC	1 cut(s)	1379
BsiHKCI	CYCGRG	1 cut(s)	780
BsiSI	CCGG	2 cut(s)	138, 989
BslFI	GGGAC	1 cut(s)	626
BslI	CCNNNNNNNGG	3 cut(s)	221, 1652, 1739
BsmAI	GTCTC	2 cut(s)	311, 1164
BsmBI	CGTCTC	1 cut(s)	311
BsmFI	GGGAC	1 cut(s)	626
BsmI	GAATGC	3 cut(s)	4, 1429, 1770
BsnI	GGCC	7 cut(s)	103, 462, 828, 988, 1785, 1865, 1904
BsoBI	CYCGRG	1 cut(s)	780
Bsp119I	TTCGAA	1 cut(s)	1045
Bsp120I	GGGCCC	1 cut(s)	1902
Bsp1286I	GDGCHC	3 cut(s)	331, 1379, 1906
Bsp143I	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
BspACI	CCGC	3 cut(s)	575, 1747, 1768
BspANI	GGCC	7 cut(s)	103, 462, 828, 988, 1785, 1865, 1904
BspCNI	CTCAG	4 cut(s)	256, 1027, 1654, 1794
BspHI	TCATGA	1 cut(s)	1504
BspLI	GGNNCC	3 cut(s)	518, 993, 1904
BspMI	ACCTGC	2 cut(s)	580, 1382
BspPI	GGATC	3 cut(s)	596, 1333, 1724
BspQI	GCTCTTC	1 cut(s)	101
BspT104I	TTCGAA	1 cut(s)	1045
BspT107I	GGYRCC	1 cut(s)	516
BsrI	ACTGG	4 cut(s)	28, 561, 1744, 1844
BssECI	CCNNGG	3 cut(s)	293, 1786, 1866
BssMI	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
BssNI	GRCGYC	2 cut(s)	171, 517
BssSI	CACGAG	1 cut(s)	1566
BssT1I	CCWWGG	1 cut(s)	293
Bst2BI	CACGAG	1 cut(s)	1566
Bst2UI	CCWGG	1 cut(s)	830
Bst4CI	ACNGT	5 cut(s)	185, 333, 1234, 1288, 1724
Bst6I	CTCTTC	4 cut(s)	101, 220, 648, 1888
BstACI	GRCGYC	2 cut(s)	171, 517
BstBI	TTCGAA	1 cut(s)	1045
BstC8I	GCNNGC	7 cut(s)	441, 809, 818, 986, 1140, 1253, 1620
BstDEI	CTNAG	8 cut(s)	264, 345, 528, 956, 1014, 1071, 1662, 1802
BstF5I	GGATG	4 cut(s)	614, 700, 715, 1661
BstH2I	RGCGCY	3 cut(s)	162, 290, 520
BstHHI	GCGC	4 cut(s)	120, 161, 289, 519
BstKTI	GATC	8 cut(s)	604, 1153, 1184, 1328, 1504, 1531, 1732, 1837
BstMAI	GTCTC	2 cut(s)	311, 1164
BstMBI	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
BstMWI	GCNNNNNNNGC	7 cut(s)	100, 124, 284, 813, 817, 1015, 1139
BstNI	CCWGG	1 cut(s)	830
BstNSI	RCATGY	2 cut(s)	820, 1345
BstPAI	GACNNNNGTC	1 cut(s)	310
BstSCI	CCNGG	1 cut(s)	828
BstSFI	CTRYAG	2 cut(s)	89, 1807
BstSLI	GKGCMC	3 cut(s)	331, 1379, 1906
BstV1I	GCAGC	1 cut(s)	55
BstV2I	GAAGAC	2 cut(s)	310, 1742
BstX2I	RGATCY	1 cut(s)	1325
BstXI	CCANNNNNNTGG	1 cut(s)	1861
BstYI	RGATCY	1 cut(s)	1325
BsuI	GTATCC	1 cut(s)	935
BsuRI	GGCC	7 cut(s)	103, 462, 828, 988, 1785, 1865, 1904
BtrI	CACGTC	1 cut(s)	1117
BtsCI	GGATG	4 cut(s)	614, 700, 715, 1661
BtsIMutI	CAGTG	4 cut(s)	554, 1230, 1353, 1914
BveI	ACCTGC	2 cut(s)	580, 1382
Cac8I	GCNNGC	7 cut(s)	441, 809, 818, 986, 1140, 1253, 1620
CaiI	CAGNNNCTG	1 cut(s)	1850
CciI	TCATGA	1 cut(s)	1504
CfoI	GCGC	4 cut(s)	120, 161, 289, 519
Cfr13I	GGNCC	5 cut(s)	102, 888, 1593, 1902, 1903
CseI	GACGC	1 cut(s)	179
Csp6I	GTAC	3 cut(s)	299, 476, 1717
CviAII	CATG	8 cut(s)	115, 372, 817, 1303, 1342, 1436, 1505, 1758
CviQI	GTAC	3 cut(s)	299, 476, 1717
DdeI	CTNAG	8 cut(s)	264, 345, 528, 956, 1014, 1071, 1662, 1802
DinI	GGCGCC	1 cut(s)	518
DpnI	GATC	8 cut(s)	603, 1152, 1183, 1327, 1503, 1530, 1731, 1836
DpnII	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
DraI	TTTAAA	1 cut(s)	241
DraIII	CACNNNGTG	1 cut(s)	531
EaeI	YGGCCR	4 cut(s)	826, 986, 1783, 1863
Eam1104I	CTCTTC	4 cut(s)	101, 220, 648, 1888
EarI	CTCTTC	4 cut(s)	101, 220, 648, 1888
EciI	GGCGGA	1 cut(s)	1762
Eco130I	CCWWGG	1 cut(s)	293
Eco24I	GRGCYC	1 cut(s)	1906
Eco47I	GGWCC	2 cut(s)	888, 1593
Eco47III	AGCGCT	1 cut(s)	288
Eco57I	CTGAAG	3 cut(s)	449, 528, 1694
Eco88I	CYCGRG	1 cut(s)	780
EcoO109I	RGGNCCY	1 cut(s)	1903
EcoRII	CCWGG	1 cut(s)	828
EcoT14I	CCWWGG	1 cut(s)	293
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	1906
EgeI	GGCGCC	1 cut(s)	518
EheI	GGCGCC	1 cut(s)	518
ErhI	CCWWGG	1 cut(s)	293
Esp3I	CGTCTC	1 cut(s)	311
FaeI	CATG	8 cut(s)	118, 375, 820, 1306, 1345, 1439, 1508, 1761
FaqI	GGGAC	1 cut(s)	626
FatI	CATG	8 cut(s)	114, 371, 816, 1302, 1341, 1435, 1504, 1757
FauNDI	CATATG	2 cut(s)	1189, 1555
FbaI	TGATCA	2 cut(s)	1501, 1834
FblI	GTMKAC	1 cut(s)	1283
Fnu4HI	GCNGC	2 cut(s)	44, 576
FokI	GGATG	4 cut(s)	601, 687, 722, 1668
FriOI	GRGCYC	1 cut(s)	1906
Fsp4HI	GCNGC	2 cut(s)	44, 576
FspBI	CTAG	5 cut(s)	279, 425, 756, 921, 1887
FspI	TGCGCA	1 cut(s)	119
GlaI	GCGC	4 cut(s)	119, 160, 288, 518
GluI	GCNGC	2 cut(s)	44, 576
GsuI	CTGGAG	1 cut(s)	1737
HaeII	RGCGCY	3 cut(s)	162, 290, 520
HaeIII	GGCC	7 cut(s)	103, 462, 828, 988, 1785, 1865, 1904
HapII	CCGG	2 cut(s)	138, 989
HgaI	GACGC	1 cut(s)	179
HhaI	GCGC	4 cut(s)	120, 161, 289, 519
Hin1I	GRCGYC	2 cut(s)	171, 517
Hin1II	CATG	8 cut(s)	118, 375, 820, 1306, 1345, 1439, 1508, 1761
Hin6I	GCGC	4 cut(s)	118, 159, 287, 517
HinP1I	GCGC	4 cut(s)	118, 159, 287, 517
HincII	GTYRAC	1 cut(s)	945
HindII	GTYRAC	1 cut(s)	945
HindIII	AAGCTT	1 cut(s)	1892
HpaI	GTTAAC	1 cut(s)	945
HpaII	CCGG	2 cut(s)	138, 989
HphI	GGTGA	6 cut(s)	647, 701, 743, 1373, 1406, 1736
Hpy166II	GTNNAC	4 cut(s)	945, 1259, 1284, 1377
Hpy188III	TCNNGA	6 cut(s)	467, 548, 780, 788, 1154, 1505
Hpy8I	GTNNAC	4 cut(s)	945, 1259, 1284, 1377
Hpy99I	CGWCG	1 cut(s)	173
HpyAV	CCTTC	2 cut(s)	473, 1806
HpyCH4III	ACNGT	5 cut(s)	185, 333, 1234, 1288, 1724
HpyCH4IV	ACGT	4 cut(s)	320, 1116, 1272, 1358
HpyCH4V	TGCA	7 cut(s)	4, 700, 1142, 1377, 1435, 1622, 1922
HpyF10VI	GCNNNNNNNGC	7 cut(s)	100, 124, 284, 813, 817, 1015, 1139
HpyF3I	CTNAG	8 cut(s)	264, 345, 528, 956, 1014, 1071, 1662, 1802
HpySE526I	ACGT	4 cut(s)	320, 1116, 1272, 1358
Hsp92I	GRCGYC	2 cut(s)	171, 517
Hsp92II	CATG	8 cut(s)	118, 375, 820, 1306, 1345, 1439, 1508, 1761
HspAI	GCGC	4 cut(s)	118, 159, 287, 517
KasI	GGCGCC	1 cut(s)	516
Ksp22I	TGATCA	2 cut(s)	1501, 1834
KspAI	GTTAAC	1 cut(s)	945
Kzo9I	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
LguI	GCTCTTC	1 cut(s)	101
LmnI	GCTCC	3 cut(s)	991, 1248, 2011
Lsp1109I	GCAGC	1 cut(s)	55
LweI	GCATC	4 cut(s)	178, 265, 709, 1909
MaeI	CTAG	5 cut(s)	279, 425, 756, 921, 1887
MaeII	ACGT	4 cut(s)	320, 1116, 1272, 1358
MaeIII	GTNAC	7 cut(s)	663, 731, 1117, 1316, 1763, 1797, 1846
MalI	GATC	8 cut(s)	603, 1152, 1183, 1327, 1503, 1530, 1731, 1836
MboI	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
MfeI	CAATTG	1 cut(s)	822
MflI	RGATCY	1 cut(s)	1325
MhlI	GDGCHC	3 cut(s)	331, 1379, 1906
MlsI	TGGCCA	1 cut(s)	828
MluNI	TGGCCA	1 cut(s)	828
Mly113I	GGCGCC	1 cut(s)	517
MlyI	GAGTC	5 cut(s)	117, 188, 269, 1166, 1744
MmeI	TCCRAC	4 cut(s)	204, 361, 952, 1948
Mox20I	TGGCCA	1 cut(s)	828
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	288, 1058
MscI	TGGCCA	1 cut(s)	828
MslI	CAYNNNNRTG	2 cut(s)	1346, 1859
Msp20I	TGGCCA	1 cut(s)	828
MspA1I	CMGCKG	1 cut(s)	443
MspI	CCGG	2 cut(s)	138, 989
MspR9I	CCNGG	1 cut(s)	830
MunI	CAATTG	1 cut(s)	822
Mva1269I	GAATGC	3 cut(s)	4, 1429, 1770
MvaI	CCWGG	1 cut(s)	830
MwoI	GCNNNNNNNGC	7 cut(s)	100, 124, 284, 813, 817, 1015, 1139
NarI	GGCGCC	1 cut(s)	517
NdeI	CATATG	2 cut(s)	1189, 1555
NdeII	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
NlaIII	CATG	8 cut(s)	118, 375, 820, 1306, 1345, 1439, 1508, 1761
NlaIV	GGNNCC	3 cut(s)	518, 993, 1904
NmeAIII	GCCGAG	2 cut(s)	1811, 1891
NmuCI	GTSAC	3 cut(s)	731, 1117, 1763
NsbI	TGCGCA	1 cut(s)	119
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	820, 1345
NspV	TTCGAA	1 cut(s)	1045
PaeI	GCATGC	1 cut(s)	820
PaeR7I	CTCGAG	1 cut(s)	780
PagI	TCATGA	1 cut(s)	1504
PaqCI	CACCTGC	1 cut(s)	1382
PciSI	GCTCTTC	1 cut(s)	101
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	3 cut(s)	4, 1429, 1770
PdmI	GAANNNNTTC	2 cut(s)	288, 1058
PfeI	GAWTC	5 cut(s)	11, 146, 176, 230, 776
PflMI	CCANNNNNTGG	1 cut(s)	1652
PkrI	GCNGC	2 cut(s)	45, 577
PleI	GAGTC	5 cut(s)	116, 188, 268, 1165, 1744
PluTI	GGCGCC	1 cut(s)	520
PpsI	GAGTC	5 cut(s)	116, 188, 268, 1165, 1744
PshAI	GACNNNNGTC	1 cut(s)	310
PshBI	ATTAAT	1 cut(s)	432
Psp6I	CCWGG	1 cut(s)	828
PspGI	CCWGG	1 cut(s)	828
PspN4I	GGNNCC	3 cut(s)	518, 993, 1904
PspOMI	GGGCCC	1 cut(s)	1902
PspPI	GGNCC	5 cut(s)	102, 888, 1593, 1902, 1903
PstNI	CAGNNNCTG	1 cut(s)	1850
PsuI	RGATCY	1 cut(s)	1325
PvuII	CAGCTG	1 cut(s)	443
RsaI	GTAC	3 cut(s)	300, 477, 1718
RsaNI	GTAC	3 cut(s)	299, 476, 1717
RseI	CAYNNNNRTG	2 cut(s)	1346, 1859
SapI	GCTCTTC	1 cut(s)	101
SatI	GCNGC	2 cut(s)	44, 576
Sau3AI	GATC	8 cut(s)	601, 1150, 1181, 1325, 1501, 1528, 1729, 1834
Sau96I	GGNCC	5 cut(s)	102, 888, 1593, 1902, 1903
ScaI	AGTACT	1 cut(s)	1718
SchI	GAGTC	5 cut(s)	117, 188, 269, 1166, 1744
ScrFI	CCNGG	1 cut(s)	830
SduI	GDGCHC	3 cut(s)	331, 1379, 1906
SfaNI	GCATC	4 cut(s)	178, 265, 709, 1909
SfcI	CTRYAG	2 cut(s)	89, 1807
SfoI	GGCGCC	1 cut(s)	518
Sfr274I	CTCGAG	1 cut(s)	780
SfuI	TTCGAA	1 cut(s)	1045
SinI	GGWCC	2 cut(s)	888, 1593
SlaI	CTCGAG	1 cut(s)	780
SmiMI	CAYNNNNRTG	2 cut(s)	1346, 1859
SmlI	CTYRAG	3 cut(s)	780, 883, 1154
SmoI	CTYRAG	3 cut(s)	780, 883, 1154
SpeI	ACTAGT	1 cut(s)	755
SphI	GCATGC	1 cut(s)	820
SsiI	CCGC	3 cut(s)	575, 1747, 1768
SspDI	GGCGCC	1 cut(s)	516
SspMI	CTAG	5 cut(s)	279, 425, 756, 921, 1887
StyD4I	CCNGG	1 cut(s)	828
StyI	CCWWGG	1 cut(s)	293
TaaI	ACNGT	5 cut(s)	185, 333, 1234, 1288, 1724
TaiI	ACGT	4 cut(s)	323, 1119, 1275, 1361
TaqI	TCGA	6 cut(s)	568, 781, 937, 1045, 1447, 1840
TaqII	GACCGA	1 cut(s)	905
TatI	WGTACW	1 cut(s)	1716
TauI	GCSGC	1 cut(s)	578
TfiI	GAWTC	5 cut(s)	11, 146, 176, 230, 776
TscAI	CASTG	4 cut(s)	561, 1237, 1353, 1921
TseFI	GTSAC	3 cut(s)	731, 1117, 1763
TseI	GCWGC	1 cut(s)	43
Tsp45I	GTSAC	3 cut(s)	731, 1117, 1763
TspGWI	ACGGA	1 cut(s)	1186
TspRI	CASTG	4 cut(s)	561, 1237, 1353, 1921
Van91I	CCANNNNNTGG	1 cut(s)	1652
VneI	GTGCAC	1 cut(s)	1375
VpaK11BI	GGWCC	2 cut(s)	888, 1593
VspI	ATTAAT	1 cut(s)	432
XapI	RAATTY	2 cut(s)	390, 1036
XceI	RCATGY	2 cut(s)	820, 1345
XcmI	CCANNNNNNNNNTGG	2 cut(s)	528, 1653
XhoI	CTCGAG	1 cut(s)	780
XmiI	GTMKAC	1 cut(s)	1283
XmnI	GAANNNNTTC	2 cut(s)	288, 1058
XspI	CTAG	5 cut(s)	279, 425, 756, 921, 1887
ZrmI	AGTACT	1 cut(s)	1718
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.