Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00292

Orthogroup ID

OG0004177

Physical Location & Seq

Genomic Coordinates Reverse (-)

60380 .. 66984

Gene Structure 6605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G007940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGCCTCCACAGATGAAGCCCAACTCCAAGAATCAGCAACAGCTGTTCTGGCCCAGAGTTGTGATGCGCAAATGGCTCAACATCTCCGCCAAAGAGTCCGATTACAGCGCCGATACCGAAGACGAAGACGACTGGGATCCTGACTCCCCAACAAGCCAGCAAGATTTTGATCAACGGGGAAGAGGATCAAGGTTTAAAGATATCAAAGAGGATGAGTCTGAGGATGATGATGACCTTGATGATCTTCCTAGAGTACGAAGACGAAAATCAGAGACCTTTAGAACACAGTATATAAATACAAAGGAACTCAGAATAAGAGTTGGTACATGGAATGTTGGAGGACAGACTCCACCCGATGACCTGGATATTGATGGTTGGCTAGATATCAATGACCCAGCCGACATCTATGTAATTGGTCTTCAGGAGATCGTGCCACTCAATGCTGGGAATATATTTGGTGCCGAAGATAGCCGGCCAGTTAGTAAGTGGGAAAATGTCATCCGTGAAACGCTGGATAGATTTCGACCTGCGGGCAACAAGGTTAAATCCTTTAGTGATCCTCCATCACCCTCAAAATTTAGGCCATCTGATGATGTCCCTTATATGGAAGAGGAAATATTAGATGAAAGTGATAGTGATATTGGCAATGAAGTCCATCCATTGGATGACGAACCCAAAGATTTTGGTGTCAGCAATGGTACATCAGTCACAAGCAAAACAGTGAATGTTGATGGTCCTGTTTCTAACTTTACTGATAGTACTAAACCGGGGATGCCAATTGGAGAGGATTTACAGAGGCAACATTCTTCTCCAAAGAGATTAGATAGGTTATATTGCCTTCGGCCAGATGATTGTCCATTAGATGAAGACACTTCTGCTGTCCAACATAATGGCAAGTTAACCAAAATGCTTAGTGGGTCTGAAAGAATTGGTTTGAACTGGCCGGAGCGACCATTGAACTTGCTATCTCAGCACTTATTAGAGCGACGAAATTCCTTTAGACCAACGAAGTCTTTCAAGTCCTCAAAATCGTTCAGGACACACAATTCTTTCAAGTCAGCTGCAAATGACATGGCACCAGAATTAGCTTTGCTTGAAGAGATTGATCTTGAATCTCTCATGAAACGGGAACGAAGACCATCATATGTAAGGATAGTAAGTAAGCAGATGGTTGGGATTTTCCTAACTGTATGGGTTCGTAGGAGCTTACGTAAACACATTCAGAACTTAAAGGTGTCAACTGTTGGTGTTGGTGTTATGGGATACATTGGTAACAAGGGATCTGTATCTGTGAGTATGTCCATATATCAGACACTGTTTTGTTTCGTGTGCACTCACCTGACAGCAGGTGAAAGGGAGGTAGATGAATCAAAAAGAAATGCTGATGTGCAAGAAATTCATCGGAGAACTCACTTTCATTCGTTTTCTGGTATTGGGCTTCCGAAAAGTATCCATGACCATGAAAGAATAATTTGGTTGGGTGATCTAAATTATCGTATCAACTTGTCATATGAGAAAACACAAGAACTCATCTCCAAAAAGGAGTGGTCCCAGTTGGCTGAGAAGGACCAGCTTGCACGACAATTTAAAAAAGGTCTTGCATTTGATGGATGGTCTGAGGGTGTTCTAAATTTCCCGCCAACGTATAAGTATGAGATGAATTCAGACAAGTATTATGGAGAGGATCCAAAGGGTGGAAGGCGGACTCCAGCATGGTGTGACCGCATTCTTTCATATGGCCGAGGAATGAGGTTACTGCAGTATAGAAGGATTGAACATAAATTTTCTGATCATCGACCAGTGACTGCTACTTATATGGCAGAGGTTGAGGTTTTTTCTGCTAGGAGGCTTCAGCGGGCTCTCACATTCACTGATGCAGAGATTGAAAATGAGGAAATTGCAACGGATATGGGTATTGATGTTGGAATGAACAACTTAAAATTGGAACAGGGTATATCTGATTGGGATCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0004445 GO:0005975 GO:0006066 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009791 GO:0009845 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0019751 GO:0030258 GO:0032501 GO:0032502 GO:0032957 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0043647 GO:0044237 GO:0044238 GO:0044255 GO:0044262 GO:0044281 GO:0044282 GO:0046030 GO:0046164 GO:0046174 GO:0046434 GO:0046486 GO:0046488 GO:0046838 GO:0046839 GO:0046855 GO:0046856 GO:0048856 GO:0052745 GO:0052866 GO:0071545 GO:0071704 GO:0090351 GO:0106019 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko03010 ko04070 map00562 map01100 map03010 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

657

Amino Acids

75.54

Weight (kDa)

5.58

Isoelectric Point (pI)

51.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	108 - 174	3.7e-07	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	370 - 603	1.1e-66	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71710 AT1G71710
fragaria_vesca	FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960 FvH4_2g12960
malus_domestica	MD05G1034300.v1.1 MD10G1036300.v1.1
prunus_persica	Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1 Prupe.8G042000_v2.0.a1
pyrus_communis	pycom05g02480 pycom10g02470
rosa_chinensis	RchiOBHm_Chr6g0274091
rosa_laevigata	RLG00000013579
rosa_multiflora	Rmu_co8515147.1_g000001 Rmu_ssc0000413.1_g000006
rosa_roxburghii	Rroxscaffold_7G00194670
rosa_rugosa	Rorug06G0078500 Rorug06G0078500 Rorug06G0078500
rosa_samantha	Rh6AG194400 Rh6BG198400 Rh6CG198300 Rh6DG189800
rosa_wichuraiana	Rw0G007940 Rw6G016940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1337
Acc16I	TGCGCA	1 cut(s)	68
Acc36I	ACCTGC	2 cut(s)	535, 1337
AccB1I	GGYRCC	2 cut(s)	458, 1075
AccB7I	CCANNNNNTGG	2 cut(s)	661, 1694
AciI	CCGC	6 cut(s)	87, 530, 1637, 1702, 1723, 1855
AclWI	GGATC	7 cut(s)	131, 144, 193, 551, 1288, 1679, 1692
AcoI	YGGCCR	4 cut(s)	473, 842, 941, 1738
AcsI	RAATTY	6 cut(s)	575, 991, 1395, 1630, 1660, 1781
AcuI	CTGAAG	2 cut(s)	404, 1835
AfaI	GTAC	4 cut(s)	255, 325, 700, 760
AfiI	CCNNNNNNNGG	3 cut(s)	604, 661, 1694
AgsI	TTSAA	8 cut(s)	937, 958, 1018, 1054, 1097, 1112, 1775, 1886
AjnI	CCWGG	1 cut(s)	360
AluBI	AGCT	5 cut(s)	43, 1061, 1088, 1206, 1573
AluI	AGCT	5 cut(s)	43, 1061, 1088, 1206, 1573
Alw21I	GWGCWC	1 cut(s)	1334
Alw26I	GTCTC	1 cut(s)	266
Alw44I	GTGCAC	1 cut(s)	1330
AlwI	GGATC	7 cut(s)	131, 144, 193, 551, 1288, 1679, 1692
AlwNI	CAGNNNCTG	2 cut(s)	1315, 1805
AoxI	GGCC	6 cut(s)	50, 473, 581, 842, 941, 1738
ApaLI	GTGCAC	1 cut(s)	1330
ApeKI	GCWGC	1 cut(s)	1061
ApoI	RAATTY	6 cut(s)	575, 991, 1395, 1630, 1660, 1781
Asp700I	GAANNNNTTC	1 cut(s)	1013
AspLEI	GCGC	2 cut(s)	69, 110
AspS9I	GGNCC	4 cut(s)	51, 734, 1548, 1567
AsuC2I	CCSGG	1 cut(s)	768
AsuHPI	GGTGA	4 cut(s)	558, 1328, 1361, 1493
AvaII	GGWCC	3 cut(s)	734, 1548, 1567
BaeGI	GKGCMC	1 cut(s)	1334
BaeI	ACNNNNGTAYC	4 cut(s)	690, 723, 1255, 1288
BamHI	GGATCC	2 cut(s)	136, 1684
BanI	GGYRCC	2 cut(s)	458, 1075
BanII	GRGCYC	1 cut(s)	1861
BarI	GAAGNNNNNNTAC	2 cut(s)	402, 434
BbsI	GAAGAC	6 cut(s)	126, 132, 265, 410, 873, 1141
Bbv12I	GWGCWC	1 cut(s)	1334
BbvI	GCAGC	1 cut(s)	1048
BccI	CCATC	9 cut(s)	365, 571, 592, 663, 725, 1147, 1162, 1601, 1605
BciT130I	CCWGG	1 cut(s)	362
BciVI	GTATCC	2 cut(s)	1256, 1460
BclI	TGATCA	2 cut(s)	169, 1789
BcnI	CCSGG	1 cut(s)	768
BcoDI	GTCTC	1 cut(s)	266
BfaI	CTAG	3 cut(s)	249, 380, 1842
BfmI	CTRYAG	1 cut(s)	1757
BfoI	RGCGCY	1 cut(s)	111
BfuAI	ACCTGC	2 cut(s)	535, 1337
BfuI	GTATCC	2 cut(s)	1256, 1460
BisI	GCNGC	1 cut(s)	1062
BlsI	GCNGC	1 cut(s)	1063
BmcAI	AGTACT	1 cut(s)	760
Bme1390I	CCNGG	2 cut(s)	362, 768
Bme18I	GGWCC	3 cut(s)	734, 1548, 1567
BmgT120I	GGNCC	4 cut(s)	51, 734, 1548, 1567
BmiI	GGNNCC	5 cut(s)	138, 460, 1077, 1550, 1686
BmrFI	CCNGG	2 cut(s)	362, 768
BmrI	ACTGGG	2 cut(s)	142, 1546
BmsI	GCATC	3 cut(s)	54, 762, 1864
BmuI	ACTGGG	2 cut(s)	142, 1546
BpiI	GAAGAC	6 cut(s)	126, 132, 265, 410, 873, 1141
BpmI	CTGGAG	1 cut(s)	1692
BpuMI	CCSGG	1 cut(s)	768
BsaAI	YACGTR	1 cut(s)	1211
BsaBI	GATNNNNATC	3 cut(s)	168, 1285, 1965
BsaI	GGTCTC	1 cut(s)	266
BsaJI	CCNNGG	2 cut(s)	767, 1741
BsaXI	ACNNNNNCTCC	2 cut(s)	1195, 1225
Bsc4I	CCNNNNNNNGG	3 cut(s)	604, 661, 1694
Bse118I	RCCGGY	1 cut(s)	471
Bse1I	ACTGG	5 cut(s)	137, 476, 944, 1552, 1799
Bse3DI	GCAATG	2 cut(s)	652, 700
Bse8I	GATNNNNATC	3 cut(s)	168, 1285, 1965
BseBI	CCWGG	1 cut(s)	362
BseDI	CCNNGG	2 cut(s)	767, 1741
BseGI	GGATG	7 cut(s)	217, 229, 498, 655, 670, 777, 1616
BseJI	GATNNNNATC	3 cut(s)	168, 1285, 1965
BseLI	CCNNNNNNNGG	3 cut(s)	604, 661, 1694
BseMI	GCAATG	2 cut(s)	652, 700
BseMII	CTCAG	5 cut(s)	210, 322, 983, 1551, 1608
BseNI	ACTGG	5 cut(s)	137, 476, 944, 1552, 1799
BseSI	GKGCMC	1 cut(s)	1334
BseXI	GCAGC	1 cut(s)	1048
BseYI	CCCAGC	2 cut(s)	394, 443
BshFI	GGCC	6 cut(s)	52, 475, 583, 844, 943, 1740
BshNI	GGYRCC	2 cut(s)	458, 1075
BsiHKAI	GWGCWC	1 cut(s)	1334
BsiSI	CCGG	3 cut(s)	472, 767, 944
BslFI	GGGAC	2 cut(s)	581, 1534
BslI	CCNNNNNNNGG	3 cut(s)	604, 661, 1694
BsmAI	GTCTC	1 cut(s)	266
BsmFI	GGGAC	2 cut(s)	581, 1534
BsmI	GAATGC	1 cut(s)	1725
BsnI	GGCC	6 cut(s)	52, 475, 583, 844, 943, 1740
Bso31I	GGTCTC	1 cut(s)	266
Bsp1286I	GDGCHC	2 cut(s)	1334, 1861
BspACI	CCGC	6 cut(s)	87, 530, 1637, 1702, 1723, 1855
BspANI	GGCC	6 cut(s)	52, 475, 583, 844, 943, 1740
BspCNI	CTCAG	5 cut(s)	211, 321, 982, 1552, 1609
BspHI	TCATGA	1 cut(s)	1119
BspLI	GGNNCC	5 cut(s)	138, 460, 1077, 1550, 1686
BspMAI	CTGCAG	1 cut(s)	1761
BspMI	ACCTGC	2 cut(s)	535, 1337
BspPI	GGATC	7 cut(s)	131, 144, 193, 551, 1288, 1679, 1692
BspT107I	GGYRCC	2 cut(s)	458, 1075
BspTNI	GGTCTC	1 cut(s)	266
BsrDI	GCAATG	2 cut(s)	652, 700
BsrFI	RCCGGY	1 cut(s)	471
BsrI	ACTGG	5 cut(s)	137, 476, 944, 1552, 1799
BssAI	RCCGGY	1 cut(s)	471
BssECI	CCNNGG	2 cut(s)	767, 1741
Bst2UI	CCWGG	1 cut(s)	362
Bst4CI	ACNGT	5 cut(s)	288, 721, 1189, 1243, 1317
Bst6I	CTCTTC	3 cut(s)	175, 603, 1092
BstBAI	YACGTR	1 cut(s)	1211
BstC8I	GCNNGC	5 cut(s)	158, 473, 532, 1575, 1857
BstDEI	CTNAG	6 cut(s)	219, 308, 911, 969, 1560, 1617
BstF5I	GGATG	7 cut(s)	217, 229, 498, 655, 670, 777, 1616
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	2 cut(s)	69, 110
BstMAI	GTCTC	1 cut(s)	266
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 73, 970
BstNI	CCWGG	1 cut(s)	362
BstSCI	CCNGG	2 cut(s)	360, 766
BstSFI	CTRYAG	1 cut(s)	1757
BstSLI	GKGCMC	1 cut(s)	1334
BstSNI	TACGTA	1 cut(s)	1211
BstV1I	GCAGC	1 cut(s)	1048
BstV2I	GAAGAC	6 cut(s)	126, 132, 265, 410, 873, 1141
BstX2I	RGATCY	3 cut(s)	136, 1280, 1684
BstXI	CCANNNNNNTGG	1 cut(s)	890
BstYI	RGATCY	3 cut(s)	136, 1280, 1684
BsuI	GTATCC	2 cut(s)	1256, 1460
BsuRI	GGCC	6 cut(s)	52, 475, 583, 844, 943, 1740
BtsCI	GGATG	7 cut(s)	217, 229, 498, 655, 670, 777, 1616
BtsIMutI	CAGTG	4 cut(s)	726, 1313, 1806, 1869
BveI	ACCTGC	2 cut(s)	535, 1337
Cac8I	GCNNGC	5 cut(s)	158, 473, 532, 1575, 1857
CaiI	CAGNNNCTG	2 cut(s)	1315, 1805
CciI	TCATGA	1 cut(s)	1119
CfoI	GCGC	2 cut(s)	69, 110
Cfr10I	RCCGGY	1 cut(s)	471
Cfr13I	GGNCC	4 cut(s)	51, 734, 1548, 1567
Csp6I	GTAC	4 cut(s)	254, 324, 699, 759
CviAII	CATG	6 cut(s)	327, 1072, 1120, 1454, 1460, 1713
CviQI	GTAC	4 cut(s)	254, 324, 699, 759
DdeI	CTNAG	6 cut(s)	219, 308, 911, 969, 1560, 1617
DraI	TTTAAA	2 cut(s)	196, 1588
EaeI	YGGCCR	4 cut(s)	473, 842, 941, 1738
Eam1104I	CTCTTC	3 cut(s)	175, 603, 1092
EarI	CTCTTC	3 cut(s)	175, 603, 1092
EciI	GGCGGA	2 cut(s)	76, 1717
Eco105I	TACGTA	1 cut(s)	1211
Eco24I	GRGCYC	1 cut(s)	1861
Eco31I	GGTCTC	1 cut(s)	266
Eco32I	GATATC	2 cut(s)	202, 385
Eco47I	GGWCC	3 cut(s)	734, 1548, 1567
Eco57I	CTGAAG	2 cut(s)	404, 1835
EcoRI	GAATTC	1 cut(s)	1660
EcoRII	CCWGG	1 cut(s)	360
EcoRV	GATATC	2 cut(s)	202, 385
EcoT38I	GRGCYC	1 cut(s)	1861
FaeI	CATG	6 cut(s)	330, 1075, 1123, 1457, 1463, 1716
FaqI	GGGAC	2 cut(s)	581, 1534
FatI	CATG	6 cut(s)	326, 1071, 1119, 1453, 1459, 1712
FauI	CCCGC	3 cut(s)	523, 1644, 1848
FauNDI	CATATG	3 cut(s)	1144, 1510, 1735
FbaI	TGATCA	2 cut(s)	169, 1789
Fnu4HI	GCNGC	1 cut(s)	1062
FokI	GGATG	7 cut(s)	224, 236, 485, 642, 677, 784, 1623
FriOI	GRGCYC	1 cut(s)	1861
Fsp4HI	GCNGC	1 cut(s)	1062
FspBI	CTAG	3 cut(s)	249, 380, 1842
FspI	TGCGCA	1 cut(s)	68
GlaI	GCGC	2 cut(s)	68, 109
GluI	GCNGC	1 cut(s)	1062
GsaI	CCCAGC	2 cut(s)	398, 447
GsuI	CTGGAG	1 cut(s)	1692
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	6 cut(s)	52, 475, 583, 844, 943, 1740
HapII	CCGG	3 cut(s)	472, 767, 944
HhaI	GCGC	2 cut(s)	69, 110
Hin1II	CATG	6 cut(s)	330, 1075, 1123, 1457, 1463, 1716
Hin6I	GCGC	2 cut(s)	67, 108
HinP1I	GCGC	2 cut(s)	67, 108
HincII	GTYRAC	2 cut(s)	900, 1239
HindII	GTYRAC	2 cut(s)	900, 1239
HinfI	GANTC	8 cut(s)	31, 95, 143, 215, 346, 1112, 1367, 1705
HpaI	GTTAAC	1 cut(s)	900
HpaII	CCGG	3 cut(s)	472, 767, 944
HphI	GGTGA	4 cut(s)	558, 1328, 1361, 1493
Hpy166II	GTNNAC	4 cut(s)	900, 1214, 1239, 1332
Hpy188III	TCNNGA	5 cut(s)	140, 422, 1036, 1109, 1120
Hpy8I	GTNNAC	4 cut(s)	900, 1214, 1239, 1332
Hpy99I	CGWCG	1 cut(s)	990
HpyAV	CCTTC	4 cut(s)	848, 1558, 1692, 1761
HpyCH4III	ACNGT	5 cut(s)	288, 721, 1189, 1243, 1317
HpyCH4IV	ACGT	2 cut(s)	1210, 1643
HpyCH4V	TGCA	8 cut(s)	1064, 1332, 1390, 1577, 1601, 1759, 1877, 1901
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 73, 970
HpyF3I	CTNAG	6 cut(s)	219, 308, 911, 969, 1560, 1617
HpySE526I	ACGT	2 cut(s)	1210, 1643
Hsp92II	CATG	6 cut(s)	330, 1075, 1123, 1457, 1463, 1716
HspAI	GCGC	2 cut(s)	67, 108
KroI	GCCGGC	1 cut(s)	471
KroNI	GCCGGC	1 cut(s)	473
Ksp22I	TGATCA	2 cut(s)	169, 1789
KspAI	GTTAAC	1 cut(s)	900
LmnI	GCTCC	2 cut(s)	946, 1203
Lsp1109I	GCAGC	1 cut(s)	1048
LweI	GCATC	3 cut(s)	54, 762, 1864
MaeI	CTAG	3 cut(s)	249, 380, 1842
MaeII	ACGT	2 cut(s)	1210, 1643
MaeIII	GTNAC	5 cut(s)	706, 1271, 1718, 1752, 1801
MfeI	CAATTG	1 cut(s)	777
MflI	RGATCY	3 cut(s)	136, 1280, 1684
MhlI	GDGCHC	2 cut(s)	1334, 1861
MlyI	GAGTC	5 cut(s)	104, 137, 224, 340, 1699
MmeI	TCCRAC	3 cut(s)	316, 907, 1903
MroNI	GCCGGC	1 cut(s)	471
MroXI	GAANNNNTTC	1 cut(s)	1013
MseI	TTAA	7 cut(s)	195, 543, 899, 1229, 1587, 1937, 1972
MslI	CAYNNNNRTG	1 cut(s)	1458
MspA1I	CMGCKG	3 cut(s)	43, 1061, 1855
MspI	CCGG	3 cut(s)	472, 767, 944
MspR9I	CCNGG	2 cut(s)	362, 768
MunI	CAATTG	1 cut(s)	777
Mva1269I	GAATGC	1 cut(s)	1725
MvaI	CCWGG	1 cut(s)	362
MwoI	GCNNNNNNNGC	3 cut(s)	49, 73, 970
NaeI	GCCGGC	1 cut(s)	473
NciI	CCSGG	1 cut(s)	768
NdeI	CATATG	3 cut(s)	1144, 1510, 1735
NgoMIV	GCCGGC	1 cut(s)	471
NlaIII	CATG	6 cut(s)	330, 1075, 1123, 1457, 1463, 1716
NlaIV	GGNNCC	5 cut(s)	138, 460, 1077, 1550, 1686
NmeAIII	GCCGAG	1 cut(s)	1766
NmuCI	GTSAC	3 cut(s)	706, 1718, 1801
NsbI	TGCGCA	1 cut(s)	68
PagI	TCATGA	1 cut(s)	1119
PaqCI	CACCTGC	1 cut(s)	1337
PctI	GAATGC	1 cut(s)	1725
PdiI	GCCGGC	1 cut(s)	473
PdmI	GAANNNNTTC	1 cut(s)	1013
PfeI	GAWTC	3 cut(s)	31, 1112, 1367
PflMI	CCANNNNNTGG	2 cut(s)	661, 1694
PkrI	GCNGC	1 cut(s)	1063
PleI	GAGTC	5 cut(s)	103, 137, 223, 340, 1699
PpsI	GAGTC	5 cut(s)	103, 137, 223, 340, 1699
Ppu21I	YACGTR	1 cut(s)	1211
Psp6I	CCWGG	1 cut(s)	360
PspFI	CCCAGC	2 cut(s)	394, 443
PspGI	CCWGG	1 cut(s)	360
PspN4I	GGNNCC	5 cut(s)	138, 460, 1077, 1550, 1686
PspPI	GGNCC	4 cut(s)	51, 734, 1548, 1567
PstI	CTGCAG	1 cut(s)	1761
PstNI	CAGNNNCTG	2 cut(s)	1315, 1805
PsuI	RGATCY	3 cut(s)	136, 1280, 1684
PvuII	CAGCTG	2 cut(s)	43, 1061
RsaI	GTAC	4 cut(s)	255, 325, 700, 760
RsaNI	GTAC	4 cut(s)	254, 324, 699, 759
RseI	CAYNNNNRTG	1 cut(s)	1458
SaqAI	TTAA	7 cut(s)	195, 543, 899, 1229, 1587, 1937, 1972
SatI	GCNGC	1 cut(s)	1062
Sau96I	GGNCC	4 cut(s)	51, 734, 1548, 1567
ScaI	AGTACT	1 cut(s)	760
SchI	GAGTC	5 cut(s)	104, 137, 224, 340, 1699
ScrFI	CCNGG	2 cut(s)	362, 768
SduI	GDGCHC	2 cut(s)	1334, 1861
SfaNI	GCATC	3 cut(s)	54, 762, 1864
SfcI	CTRYAG	1 cut(s)	1757
SinI	GGWCC	3 cut(s)	734, 1548, 1567
SmiMI	CAYNNNNRTG	1 cut(s)	1458
SnaBI	TACGTA	1 cut(s)	1211
SsiI	CCGC	6 cut(s)	87, 530, 1637, 1702, 1723, 1855
SspI	AATATT	1 cut(s)	618
SspMI	CTAG	3 cut(s)	249, 380, 1842
StyD4I	CCNGG	2 cut(s)	360, 766
TaaI	ACNGT	5 cut(s)	288, 721, 1189, 1243, 1317
TaiI	ACGT	2 cut(s)	1213, 1646
TaqI	TCGA	2 cut(s)	523, 1795
TatI	WGTACW	1 cut(s)	758
TfiI	GAWTC	3 cut(s)	31, 1112, 1367
Tru1I	TTAA	7 cut(s)	195, 543, 899, 1229, 1587, 1937, 1972
Tru9I	TTAA	7 cut(s)	195, 543, 899, 1229, 1587, 1937, 1972
TscAI	CASTG	4 cut(s)	726, 1320, 1806, 1876
TseFI	GTSAC	3 cut(s)	706, 1718, 1801
TseI	GCWGC	1 cut(s)	1061
Tsp45I	GTSAC	3 cut(s)	706, 1718, 1801
TspGWI	ACGGA	2 cut(s)	491, 1919
TspRI	CASTG	4 cut(s)	726, 1320, 1806, 1876
Van91I	CCANNNNNTGG	2 cut(s)	661, 1694
VneI	GTGCAC	1 cut(s)	1330
VpaK11BI	GGWCC	3 cut(s)	734, 1548, 1567
XapI	RAATTY	6 cut(s)	575, 991, 1395, 1630, 1660, 1781
XcmI	CCANNNNNNNNNTGG	1 cut(s)	483
XmnI	GAANNNNTTC	1 cut(s)	1013
XspI	CTAG	3 cut(s)	249, 380, 1842
ZrmI	AGTACT	1 cut(s)	760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.