MD05G1122500.v1.1

Heparan-alpha-glucosaminide N-acetyltransferase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
24524755 .. 24531214
6460 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1122500.v1.1.491

Sequence Viewer

Length: 1254 bp
ATGGCTGATTACTCGCCGCTGCTAACCGCATACGACGGTCCCGGGACCGCCAGTCCGAAGCCTCCACGCGTCGCCTCTCTTGATGTGTTCCGCGGCCTCTGCGTCTTCCTGATGATGCTAGTTGATTACGGCGGCTCAATTCTTCCGATTATCGCTCACTCCCCATGGAACGGGCTCCATTTGGCTGACTTTGTTATGCCTTTCTTTTTATTCATCGCCGGCGTTTCTCTTGCTCTTGTATACAAGAGAGTGACAAACAGAGTAGAAGCTACATGGAAGGCGGTGTTTAAGGCTGTAAAACTTTTTCTTCTAGGCGTCCTGCTTCAAGGTGGTTATTTCCATGGAGTAGCATCTTTGACTTATGGAGTTGACATTGAAAGAATACGGTGGTTTGGCATTTTGCAGAGGATAGCTATTGGATATATTGCAGCAGCTTTATGCGAGATCTGGCTTTCACGCCAGACATTGGGGGAGGTGGGATTTTTCAGGACTTATTACTGGCACTGGTGTGTCATCTTTTCATTATCAGCAATATATGCTGGGTTACTGTATGGTTTGTATGTTCCAGATTGGGAATTCAAAGCATCAACACCATCCTCTTTGCCTCCCTCTAATGCTACTACTACTTATGTGGTGAAATGTTCTGTAAGAGGAGATCTTGGACCTGCCTGTAACTCTGCTAGGATGATTGATCGTTATATTCTGGGTTTTGATCATCTATATTTGAAACCTGTTTACAGGAACCTGAAGGAATGCAATGTCTCTGCTGATGGTCGGGTTCCAGAGAGTTCACCTTCATGGTGTCATACTCCTTTTGATCCTGAAGGTATTTTAAGCTCCCTAACAGCTGCAGTGACATGCATAATTGGACTTCAATATGGTCACATACTTGCACACATACAGGACCACAAAGAGCGCCTGAACATTTGGTTCTTCTCTTCAGTTTTAATGTTTGTTCTTGGTTTGTTTCTTGCATTCATAGGCATTCCTGTAAATAAATCTCTGTATACTATCAGTTATATGCTAATTACTTCTGCATCTGCGGGAATCACATTTTGCACTCTGTATCTGCTGGTAGATGTTTACGGTTATAGATGCATGACATATGTGTTGGAGTGGATGGGAATACATTCTTTGACTATTTTTGTTGTGGTAACTTCCAACCTAGCTGTTATTGCGATTCAAGGATTCTACTTGGCCGATCCTCAAAATAACATTGTTCATTGGATCATAACACGGTTTGTGCACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

418

Amino Acids

46.65

Weight (kDa)

8.25

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 673
AccB7I CCANNNNNTGG 1 cut(s) 466
AccI GTMKAC 2 cut(s) 240, 1007
AccII CGCG 2 cut(s) 69, 93
AciI CCGC 8 cut(s) 17, 27, 48, 91, 93, 132, 281, 1043
AclWI GGATC 3 cut(s) 812, 1196, 1235
AcoI YGGCCR 1 cut(s) 1197
AcsI RAATTY 1 cut(s) 575
AcuI CTGAAG 3 cut(s) 767, 843, 924
AcyI GRCGYC 1 cut(s) 315
AfiI CCNNNNNNNGG 2 cut(s) 170, 466
AflIII ACRYGT 1 cut(s) 67
AgsI TTSAA 6 cut(s) 326, 377, 580, 727, 875, 1184
AhdI GACNNNNNGTC 1 cut(s) 51
AleI CACNNNNGTG 1 cut(s) 507
AluBI AGCT 6 cut(s) 269, 413, 434, 837, 848, 1169
AluI AGCT 6 cut(s) 269, 413, 434, 837, 848, 1169
Alw21I GWGCWC 1 cut(s) 1248
Alw26I GTCTC 1 cut(s) 766
Alw44I GTGCAC 1 cut(s) 1244
AlwI GGATC 3 cut(s) 812, 1196, 1235
Ama87I CYCGRG 1 cut(s) 41
AoxI GGCC 2 cut(s) 94, 1197
ApaLI GTGCAC 1 cut(s) 1244
ApeKI GCWGC 4 cut(s) 19, 428, 431, 848
ApoI RAATTY 1 cut(s) 575
Asp700I GAANNNNTTC 1 cut(s) 1129
AspLEI GCGC 1 cut(s) 918
AspS9I GGNCC 4 cut(s) 38, 45, 662, 904
AsuC2I CCSGG 2 cut(s) 42, 43
AsuHPI GGTGA 2 cut(s) 646, 783
AvaI CYCGRG 1 cut(s) 41
AvaII GGWCC 4 cut(s) 38, 45, 662, 904
BaeGI GKGCMC 1 cut(s) 1248
BanII GRGCYC 1 cut(s) 177
BbsI GAAGAC 1 cut(s) 97
Bbv12I GWGCWC 1 cut(s) 1248
BbvI GCAGC 4 cut(s) 6, 440, 443, 835
BccI CCATC 3 cut(s) 601, 764, 1114
BceAI ACGGC 1 cut(s) 145
BclI TGATCA 1 cut(s) 712
BcnI CCSGG 2 cut(s) 42, 43
BcoDI GTCTC 1 cut(s) 766
BfaI CTAG 4 cut(s) 119, 311, 681, 1166
BfmI CTRYAG 1 cut(s) 849
BfoI RGCGCY 1 cut(s) 919
BfuAI ACCTGC 1 cut(s) 673
BglII AGATCT 2 cut(s) 444, 655
BisI GCNGC 7 cut(s) 17, 20, 94, 133, 429, 432, 849
BlsI GCNGC 7 cut(s) 18, 21, 95, 134, 430, 433, 850
Bme1390I CCNGG 2 cut(s) 42, 43
Bme18I GGWCC 4 cut(s) 38, 45, 662, 904
BmeRI GACNNNNNGTC 1 cut(s) 51
BmeT110I CYCGRG 1 cut(s) 41
BmgT120I GGNCC 4 cut(s) 38, 45, 662, 904
BmiI GGNNCC 5 cut(s) 40, 46, 176, 743, 780
BmrFI CCNGG 2 cut(s) 42, 43
BmsI GCATC 5 cut(s) 105, 359, 593, 1046, 1085
BpiI GAAGAC 1 cut(s) 97
BpuMI CCSGG 2 cut(s) 42, 43
BsaHI GRCGYC 1 cut(s) 315
BsaJI CCNNGG 4 cut(s) 41, 91, 164, 340
Bsc4I CCNNNNNNNGG 2 cut(s) 170, 466
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 51, 503, 509
Bse3DI GCAATG 1 cut(s) 763
BseDI CCNNGG 4 cut(s) 41, 91, 164, 340
BseGI GGATG 3 cut(s) 593, 690, 1125
BseLI CCNNNNNNNGG 2 cut(s) 170, 466
BseMI GCAATG 1 cut(s) 763
BseNI ACTGG 3 cut(s) 51, 503, 509
BseRI GAGGAG 1 cut(s) 666
BseSI GKGCMC 1 cut(s) 1248
BseXI GCAGC 4 cut(s) 6, 440, 443, 835
BseYI CCCAGC 1 cut(s) 539
Bsh1236I CGCG 2 cut(s) 69, 93
BshFI GGCC 2 cut(s) 96, 1199
BsiHKAI GWGCWC 1 cut(s) 1248
BsiHKCI CYCGRG 1 cut(s) 41
BsiSI CCGG 2 cut(s) 42, 219
BslFI GGGAC 2 cut(s) 24, 58
BslI CCNNNNNNNGG 2 cut(s) 170, 466
BsmAI GTCTC 1 cut(s) 766
BsmFI GGGAC 2 cut(s) 24, 58
BsmI GAATGC 3 cut(s) 758, 974, 984
BsnI GGCC 2 cut(s) 96, 1199
BsoBI CYCGRG 1 cut(s) 41
Bsp1286I GDGCHC 2 cut(s) 177, 1248
Bsp143I GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
Bsp19I CCATGG 2 cut(s) 164, 340
BspACI CCGC 8 cut(s) 17, 27, 48, 91, 93, 132, 281, 1043
BspANI GGCC 2 cut(s) 96, 1199
BspFNI CGCG 2 cut(s) 69, 93
BspLI GGNNCC 5 cut(s) 40, 46, 176, 743, 780
BspMAI CTGCAG 1 cut(s) 853
BspMI ACCTGC 1 cut(s) 673
BspPI GGATC 3 cut(s) 812, 1196, 1235
BsrDI GCAATG 1 cut(s) 763
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 3 cut(s) 51, 503, 509
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 4 cut(s) 41, 91, 164, 340
BssMI GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
BssNAI GTATAC 2 cut(s) 241, 1008
BssNI GRCGYC 1 cut(s) 315
BssT1I CCWWGG 2 cut(s) 164, 340
Bst1107I GTATAC 2 cut(s) 241, 1008
Bst4CI ACNGT 5 cut(s) 38, 387, 549, 1088, 1239
Bst6I CTCTTC 1 cut(s) 943
BstACI GRCGYC 1 cut(s) 315
BstAPI GCANNNNNTGC 1 cut(s) 536
BstC8I GCNNGC 1 cut(s) 220
BstDSI CCRYGG 3 cut(s) 91, 164, 340
BstF5I GGATG 3 cut(s) 593, 690, 1125
BstFNI CGCG 2 cut(s) 69, 93
BstH2I RGCGCY 1 cut(s) 919
BstHHI GCGC 1 cut(s) 918
BstKTI GATC 7 cut(s) 447, 658, 694, 715, 820, 1204, 1230
BstMAI GTCTC 1 cut(s) 766
BstMBI GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
BstMWI GCNNNNNNNGC 3 cut(s) 99, 536, 1175
BstNSI RCATGY 1 cut(s) 861
BstSCI CCNGG 2 cut(s) 40, 41
BstSFI CTRYAG 1 cut(s) 849
BstSLI GKGCMC 1 cut(s) 1248
BstUI CGCG 2 cut(s) 69, 93
BstV1I GCAGC 4 cut(s) 6, 440, 443, 835
BstV2I GAAGAC 1 cut(s) 97
BstX2I RGATCY 2 cut(s) 444, 655
BstYI RGATCY 2 cut(s) 444, 655
BstZ17I GTATAC 2 cut(s) 241, 1008
BsuRI GGCC 2 cut(s) 96, 1199
BtgI CCRYGG 3 cut(s) 91, 164, 340
BtgZI GCGATG 1 cut(s) 199
BtsCI GGATG 3 cut(s) 593, 690, 1125
BtsI GCAGTG 1 cut(s) 858
BtsIMutI CAGTG 2 cut(s) 502, 858
BveI ACCTGC 1 cut(s) 673
Cac8I GCNNGC 1 cut(s) 220
CfoI GCGC 1 cut(s) 918
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 4 cut(s) 38, 45, 662, 904
Cfr42I CCGCGG 1 cut(s) 94
Cfr9I CCCGGG 1 cut(s) 41
CseI GACGC 3 cut(s) 58, 91, 304
CviAII CATG 6 cut(s) 165, 273, 341, 798, 858, 1099
DpnI GATC 7 cut(s) 446, 657, 693, 714, 819, 1203, 1229
DpnII GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
DriI GACNNNNNGTC 1 cut(s) 51
EaeI YGGCCR 1 cut(s) 1197
Eam1104I CTCTTC 1 cut(s) 943
Eam1105I GACNNNNNGTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 943
Eco130I CCWWGG 2 cut(s) 164, 340
Eco24I GRGCYC 1 cut(s) 177
Eco47I GGWCC 4 cut(s) 38, 45, 662, 904
Eco57I CTGAAG 3 cut(s) 767, 843, 924
Eco88I CYCGRG 1 cut(s) 41
EcoRI GAATTC 1 cut(s) 575
EcoT14I CCWWGG 2 cut(s) 164, 340
EcoT22I ATGCAT 2 cut(s) 863, 1100
EcoT38I GRGCYC 1 cut(s) 177
ErhI CCWWGG 2 cut(s) 164, 340
FaeI CATG 6 cut(s) 168, 276, 344, 801, 861, 1102
FaqI GGGAC 2 cut(s) 24, 58
FatI CATG 6 cut(s) 164, 272, 340, 797, 857, 1098
FauI CCCGC 1 cut(s) 1036
FauNDI CATATG 1 cut(s) 1105
FbaI TGATCA 1 cut(s) 712
FblI GTMKAC 2 cut(s) 240, 1007
Fnu4HI GCNGC 7 cut(s) 17, 20, 94, 133, 429, 432, 849
FokI GGATG 3 cut(s) 580, 697, 1132
FriOI GRGCYC 1 cut(s) 177
Fsp4HI GCNGC 7 cut(s) 17, 20, 94, 133, 429, 432, 849
FspBI CTAG 4 cut(s) 119, 311, 681, 1166
GlaI GCGC 1 cut(s) 917
GluI GCNGC 7 cut(s) 17, 20, 94, 133, 429, 432, 849
GsaI CCCAGC 1 cut(s) 543
HaeII RGCGCY 1 cut(s) 919
HaeIII GGCC 2 cut(s) 96, 1199
HapII CCGG 2 cut(s) 42, 219
HgaI GACGC 3 cut(s) 58, 91, 304
HhaI GCGC 1 cut(s) 918
Hin1I GRCGYC 1 cut(s) 315
Hin1II CATG 6 cut(s) 168, 276, 344, 801, 861, 1102
Hin6I GCGC 1 cut(s) 916
HinP1I GCGC 1 cut(s) 916
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HinfI GANTC 3 cut(s) 1047, 1180, 1188
HpaII CCGG 2 cut(s) 42, 219
HphI GGTGA 2 cut(s) 646, 783
Hpy166II GTNNAC 7 cut(s) 241, 370, 736, 791, 1008, 1084, 1246
Hpy188I TCNGA 2 cut(s) 57, 147
Hpy188III TCNNGA 6 cut(s) 80, 109, 487, 566, 782, 821
Hpy8I GTNNAC 7 cut(s) 241, 370, 736, 791, 1008, 1084, 1246
Hpy99I CGWCG 2 cut(s) 38, 74
HpyAV CCTTC 4 cut(s) 271, 742, 804, 818
HpyCH4III ACNGT 5 cut(s) 38, 387, 549, 1088, 1239
HpyF10VI GCNNNNNNNGC 3 cut(s) 99, 536, 1175
Hsp92I GRCGYC 1 cut(s) 315
Hsp92II CATG 6 cut(s) 168, 276, 344, 801, 861, 1102
HspAI GCGC 1 cut(s) 916
KroI GCCGGC 1 cut(s) 218
KroNI GCCGGC 1 cut(s) 220
Ksp22I TGATCA 1 cut(s) 712
KspI CCGCGG 1 cut(s) 94
Kzo9I GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
LmnI GCTCC 2 cut(s) 180, 842
Lsp1109I GCAGC 4 cut(s) 6, 440, 443, 835
LweI GCATC 5 cut(s) 105, 359, 593, 1046, 1085
MaeI CTAG 4 cut(s) 119, 311, 681, 1166
MaeIII GTNAC 6 cut(s) 250, 543, 671, 853, 881, 1153
MalI GATC 7 cut(s) 446, 657, 693, 714, 819, 1203, 1229
MboI GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
MboII GAAGA 5 cut(s) 97, 134, 299, 925, 930
MfeI CAATTG 1 cut(s) 1249
MflI RGATCY 2 cut(s) 444, 655
MhlI GDGCHC 2 cut(s) 177, 1248
MluCI AATT 5 cut(s) 138, 575, 864, 1026, 1249
MluI ACGCGT 1 cut(s) 67
MmeI TCCRAC 2 cut(s) 1092, 1185
Mph1103I ATGCAT 2 cut(s) 863, 1100
MreI CGCCGGCG 1 cut(s) 218
MroNI GCCGGC 1 cut(s) 218
MroXI GAANNNNTTC 1 cut(s) 1129
MseI TTAA 3 cut(s) 288, 833, 947
MslI CAYNNNNRTG 2 cut(s) 507, 796
MspA1I CMGCKG 3 cut(s) 19, 93, 848
MspI CCGG 2 cut(s) 42, 219
MspR9I CCNGG 2 cut(s) 42, 43
MunI CAATTG 1 cut(s) 1249
Mva1269I GAATGC 3 cut(s) 758, 974, 984
MvnI CGCG 2 cut(s) 69, 93
MwoI GCNNNNNNNGC 3 cut(s) 99, 536, 1175
NaeI GCCGGC 1 cut(s) 220
NciI CCSGG 2 cut(s) 42, 43
NcoI CCATGG 2 cut(s) 164, 340
NdeI CATATG 1 cut(s) 1105
NdeII GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
NgoMIV GCCGGC 1 cut(s) 218
NlaIII CATG 6 cut(s) 168, 276, 344, 801, 861, 1102
NlaIV GGNNCC 5 cut(s) 40, 46, 176, 743, 780
NmuCI GTSAC 3 cut(s) 250, 853, 881
NsiI ATGCAT 2 cut(s) 863, 1100
NspI RCATGY 1 cut(s) 861
OliI CACNNNNGTG 1 cut(s) 507
PctI GAATGC 3 cut(s) 758, 974, 984
PdiI GCCGGC 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 1129
PfeI GAWTC 3 cut(s) 1047, 1180, 1188
PflMI CCANNNNNTGG 1 cut(s) 466
PkrI GCNGC 7 cut(s) 18, 21, 95, 134, 430, 433, 850
PspFI CCCAGC 1 cut(s) 539
PspN4I GGNNCC 5 cut(s) 40, 46, 176, 743, 780
PspPI GGNCC 4 cut(s) 38, 45, 662, 904
PstI CTGCAG 1 cut(s) 853
PsuI RGATCY 2 cut(s) 444, 655
PvuII CAGCTG 1 cut(s) 848
RseI CAYNNNNRTG 2 cut(s) 507, 796
SacII CCGCGG 1 cut(s) 94
SaqAI TTAA 3 cut(s) 288, 833, 947
SatI GCNGC 7 cut(s) 17, 20, 94, 133, 429, 432, 849
Sau3AI GATC 7 cut(s) 444, 655, 691, 712, 817, 1201, 1227
Sau96I GGNCC 4 cut(s) 38, 45, 662, 904
ScrFI CCNGG 2 cut(s) 42, 43
SduI GDGCHC 2 cut(s) 177, 1248
SfaNI GCATC 5 cut(s) 105, 359, 593, 1046, 1085
SfcI CTRYAG 1 cut(s) 849
Sfr303I CCGCGG 1 cut(s) 94
SgrAI CRCCGGYG 1 cut(s) 218
SgrBI CCGCGG 1 cut(s) 94
SinI GGWCC 4 cut(s) 38, 45, 662, 904
SmaI CCCGGG 1 cut(s) 43
SmiMI CAYNNNNRTG 2 cut(s) 507, 796
Sse9I AATT 5 cut(s) 138, 575, 864, 1026, 1249
SsiI CCGC 8 cut(s) 17, 27, 48, 91, 93, 132, 281, 1043
SspMI CTAG 4 cut(s) 119, 311, 681, 1166
StyD4I CCNGG 2 cut(s) 40, 41
StyI CCWWGG 2 cut(s) 164, 340
TaaI ACNGT 5 cut(s) 38, 387, 549, 1088, 1239
TasI AATT 5 cut(s) 138, 575, 864, 1026, 1249
TauI GCSGC 3 cut(s) 19, 96, 135
TfiI GAWTC 3 cut(s) 1047, 1180, 1188
Tru1I TTAA 3 cut(s) 288, 833, 947
Tru9I TTAA 3 cut(s) 288, 833, 947
TscAI CASTG 2 cut(s) 509, 858
TseFI GTSAC 3 cut(s) 250, 853, 881
TseI GCWGC 4 cut(s) 19, 428, 431, 848
Tsp45I GTSAC 3 cut(s) 250, 853, 881
TspDTI ATGAA 5 cut(s) 202, 510, 786, 967, 1211
TspMI CCCGGG 1 cut(s) 41
TspRI CASTG 2 cut(s) 509, 858
Van91I CCANNNNNTGG 1 cut(s) 466
VneI GTGCAC 1 cut(s) 1244
VpaK11BI GGWCC 4 cut(s) 38, 45, 662, 904
XapI RAATTY 1 cut(s) 575
XceI RCATGY 1 cut(s) 861
XmaI CCCGGG 1 cut(s) 41
XmiI GTMKAC 2 cut(s) 240, 1007
XmnI GAANNNNTTC 1 cut(s) 1129
XspI CTAG 4 cut(s) 119, 311, 681, 1166
Zsp2I ATGCAT 2 cut(s) 863, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.