RLG00000015459

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0009646
Physical Location & Seq
Forward (+)
66396442 .. 66400938
4497 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015459

Sequence Viewer

Length: 1200 bp
ATGGCCGACGATTATGTCCTCATTCCAAACGGAGAAGACGACCATGCAGTCATCGCCACCACTCCCAAGCCTCCACGTGTCGCCTCCATCGATGTCTTCCGCGGCCTCTGCGTCTTCCTGATGATGGTGGTGGATTACGGCGGTTCGATTATTCCGGCGATTTCTCACTCGCCGTGGAACGGTCTCCACTTGGCTGACTTTGTGATGCCCTTCTTTCTCTTCATTGCCGGAGTTTCTCTTGCTCTGGTCTATAAGAGAGTGACTAACAGAGTTGAAGCTACATGGAAGGCCATGTTTCGGTCCCTTAAGCTTTTTCTTTTAGGCGTTCTTCTTCAAGGTGGTTATTTTCATGGAGTGAGTTCCTTGACTTATGGAGTTGACATTGAAAGAATACGGTGGTTTGGCATTTTGCAGAGGATAGCCATTGGATATATTGTTGCGGCCTTATGCGAAATCTGGCTTTCACATCGCACCTCGAGGGAAGTGAGGTTTTTCAGGAGCTATTACTGGCACTGCAAATGTTCACATCATCGAACTTTTATTATTTGGTTATTTATGATAATATTTTCTTTTTCTCTTGCTGTGAGATGTTCTCTGAGAGGAGATCTTGGACCTGCTTGTAATTCTGCTGGGATGATTGATCGTTACATTGTGGGTGTTGATCATCTCTATTCAAAACCCGTTTACAGGAACCTGAAGGATTGCAATATGTCTACTGATGGTTGGATTCCAGAGAGTTCGCCTTCATGGTGTCATACTCCTTTTGATCCTGAAGGTATATTAAGCACCCTAACAGCAGCAGTGACTTGCATAATTGGACTTCAATATGGTCACATTCTTGCACACATACAGGACCACAAAGGGCGCCTAAATATTTGGTCCTTGTTTTCAGTTTCAATGTTTGTCCTCGGATCATTTCTTGCCTTCATAGGCGTTCCTGTAAATAAATCTCTGTACACTATCAGTTATATGCTAATTACTTCTGCATCTGCAGGAATGACATTTTGCGCTCTATATCTGCTGAGAGATGTTTACGGTTACCAGTGCATAACGTTTGTGTTGGAGTGGATGGGCATACATTCTTTGAGTATTTTCATAATTGTAACTTCCAACCTAGCTGTTATTGCGATTCAGGGATTCTACTGGATTGATCCTGAGAATAATATTGTTCACTGGATCATATCTTTTGTGCACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

400

Amino Acids

45.16

Weight (kDa)

8.25

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HGSNAT_cat PF07786 26 - 149 7.2e-07 Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 14, 47
AbsI CCTCGAGG 1 cut(s) 475
Acc36I ACCTGC 1 cut(s) 622
AccB1I GGYRCC 1 cut(s) 864
AccI GTMKAC 1 cut(s) 713
AccII CGCG 1 cut(s) 102
AciI CCGC 4 cut(s) 100, 102, 141, 440
AclI AACGTT 1 cut(s) 1052
AclWI GGATC 4 cut(s) 761, 919, 1145, 1184
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 716, 792
AcvI CACGTG 1 cut(s) 77
AcyI GRCGYC 1 cut(s) 865
AfaI GTAC 1 cut(s) 956
AfiI CCNNNNNNNGG 4 cut(s) 124, 179, 297, 687
AflII CTTAAG 1 cut(s) 305
AflIII ACRYGT 1 cut(s) 76
AgsI TTSAA 6 cut(s) 275, 335, 386, 675, 824, 897
AluBI AGCT 4 cut(s) 278, 310, 501, 1118
AluI AGCT 4 cut(s) 278, 310, 501, 1118
Alw21I GWGCWC 1 cut(s) 1194
Alw26I GTCTC 1 cut(s) 188
Alw44I GTGCAC 1 cut(s) 1190
AlwI GGATC 4 cut(s) 761, 919, 1145, 1184
Ama87I CYCGRG 1 cut(s) 475
AoxI GGCC 4 cut(s) 3, 103, 288, 441
ApaLI GTGCAC 1 cut(s) 1190
ApeKI GCWGC 1 cut(s) 797
AspLEI GCGC 2 cut(s) 867, 1010
AspS9I GGNCC 4 cut(s) 300, 611, 853, 879
AvaI CYCGRG 1 cut(s) 475
AvaII GGWCC 4 cut(s) 300, 611, 853, 879
BaeGI GKGCMC 1 cut(s) 1194
BanI GGYRCC 1 cut(s) 864
BbrPI CACGTG 1 cut(s) 77
BbsI GAAGAC 3 cut(s) 42, 88, 106
Bbv12I GWGCWC 1 cut(s) 1194
BbvI GCAGC 1 cut(s) 809
BccI CCATC 4 cut(s) 95, 118, 713, 1063
BceAI ACGGC 2 cut(s) 154, 157
BclI TGATCA 1 cut(s) 661
BcoDI GTCTC 1 cut(s) 188
BfaI CTAG 1 cut(s) 1115
BfmI CTRYAG 1 cut(s) 990
BfoI RGCGCY 1 cut(s) 868
BfrI CTTAAG 1 cut(s) 305
BfuAI ACCTGC 1 cut(s) 622
BglII AGATCT 1 cut(s) 604
BisI GCNGC 3 cut(s) 103, 441, 798
BlsI GCNGC 3 cut(s) 104, 442, 799
Bme18I GGWCC 4 cut(s) 300, 611, 853, 879
BmeT110I CYCGRG 1 cut(s) 475
BmgT120I GGNCC 4 cut(s) 300, 611, 853, 879
BmiI GGNNCC 3 cut(s) 302, 692, 866
BmsI GCATC 2 cut(s) 195, 995
BpiI GAAGAC 3 cut(s) 42, 88, 106
BplI GAGNNNNNCTC 2 cut(s) 577, 609
Bsa29I ATCGAT 1 cut(s) 90
BsaAI YACGTR 1 cut(s) 77
BsaHI GRCGYC 1 cut(s) 865
BsaI GGTCTC 1 cut(s) 188
BsaJI CCNNGG 3 cut(s) 100, 173, 907
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 179, 297, 687
Bse1I ACTGG 4 cut(s) 512, 1042, 1148, 1178
Bse3DI GCAATG 1 cut(s) 222
BseCI ATCGAT 1 cut(s) 90
BseDI CCNNGG 3 cut(s) 100, 173, 907
BseGI GGATG 2 cut(s) 639, 1074
BseLI CCNNNNNNNGG 4 cut(s) 124, 179, 297, 687
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 3 cut(s) 587, 1013, 1146
BseNI ACTGG 4 cut(s) 512, 1042, 1148, 1178
BseRI GAGGAG 1 cut(s) 615
BseSI GKGCMC 1 cut(s) 1194
BseXI GCAGC 1 cut(s) 809
BseYI CCCAGC 1 cut(s) 629
Bsh1236I CGCG 1 cut(s) 102
BshFI GGCC 4 cut(s) 5, 105, 290, 443
BshNI GGYRCC 1 cut(s) 864
BshVI ATCGAT 1 cut(s) 90
BsiHKAI GWGCWC 1 cut(s) 1194
BsiHKCI CYCGRG 1 cut(s) 475
BsiSI CCGG 2 cut(s) 155, 228
BslFI GGGAC 1 cut(s) 286
BslI CCNNNNNNNGG 4 cut(s) 124, 179, 297, 687
BsmAI GTCTC 1 cut(s) 188
BsmFI GGGAC 1 cut(s) 286
BsnI GGCC 4 cut(s) 5, 105, 290, 443
Bso31I GGTCTC 1 cut(s) 188
BsoBI CYCGRG 1 cut(s) 475
Bsp1286I GDGCHC 1 cut(s) 1194
Bsp1407I TGTACA 1 cut(s) 954
Bsp143I GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
BspACI CCGC 4 cut(s) 100, 102, 141, 440
BspANI GGCC 4 cut(s) 5, 105, 290, 443
BspCNI CTCAG 3 cut(s) 588, 1014, 1147
BspDI ATCGAT 1 cut(s) 90
BspFNI CGCG 1 cut(s) 102
BspLI GGNNCC 3 cut(s) 302, 692, 866
BspMAI CTGCAG 1 cut(s) 994
BspMI ACCTGC 1 cut(s) 622
BspPI GGATC 4 cut(s) 761, 919, 1145, 1184
BspT107I GGYRCC 1 cut(s) 864
BspTI CTTAAG 1 cut(s) 305
BspTNI GGTCTC 1 cut(s) 188
BsrDI GCAATG 1 cut(s) 222
BsrGI TGTACA 1 cut(s) 954
BsrI ACTGG 4 cut(s) 512, 1042, 1148, 1178
BssECI CCNNGG 3 cut(s) 100, 173, 907
BssMI GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
BssNI GRCGYC 1 cut(s) 865
Bst4CI ACNGT 3 cut(s) 182, 396, 1037
Bst6I CTCTTC 1 cut(s) 224
BstACI GRCGYC 1 cut(s) 865
BstAFI CTTAAG 1 cut(s) 305
BstAUI TGTACA 1 cut(s) 954
BstBAI YACGTR 1 cut(s) 77
BstDEI CTNAG 3 cut(s) 596, 1022, 1155
BstDSI CCRYGG 2 cut(s) 100, 173
BstEII GGTNACC 1 cut(s) 1037
BstF5I GGATG 2 cut(s) 639, 1074
BstFNI CGCG 1 cut(s) 102
BstH2I RGCGCY 1 cut(s) 868
BstHHI GCGC 2 cut(s) 867, 1010
BstKTI GATC 7 cut(s) 607, 643, 664, 769, 914, 1153, 1179
BstMAI GTCTC 1 cut(s) 188
BstMBI GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
BstMWI GCNNNNNNNGC 3 cut(s) 53, 108, 1124
BstPI GGTNACC 1 cut(s) 1037
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 1 cut(s) 1194
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 1 cut(s) 809
BstV2I GAAGAC 3 cut(s) 42, 88, 106
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
Bsu15I ATCGAT 1 cut(s) 90
BsuRI GGCC 4 cut(s) 5, 105, 290, 443
BsuTUI ATCGAT 1 cut(s) 90
BtgI CCRYGG 2 cut(s) 100, 173
BtgZI GCGATG 2 cut(s) 37, 452
BtsCI GGATG 2 cut(s) 639, 1074
BtsI GCAGTG 2 cut(s) 511, 807
BtsIMutI CAGTG 4 cut(s) 511, 807, 1049, 1171
BveI ACCTGC 1 cut(s) 622
CfoI GCGC 2 cut(s) 867, 1010
Cfr13I GGNCC 4 cut(s) 300, 611, 853, 879
Cfr42I CCGCGG 1 cut(s) 103
ClaI ATCGAT 1 cut(s) 90
CseI GACGC 1 cut(s) 100
Csp6I GTAC 1 cut(s) 955
CviAII CATG 5 cut(s) 44, 282, 292, 350, 747
CviQI GTAC 1 cut(s) 955
DdeI CTNAG 3 cut(s) 596, 1022, 1155
DinI GGCGCC 1 cut(s) 866
DpnI GATC 7 cut(s) 606, 642, 663, 768, 913, 1152, 1178
DpnII GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
DrdI GACNNNNNNGTC 2 cut(s) 14, 47
DseDI GACNNNNNNGTC 2 cut(s) 14, 47
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 224
EarI CTCTTC 1 cut(s) 224
Eco31I GGTCTC 1 cut(s) 188
Eco47I GGWCC 4 cut(s) 300, 611, 853, 879
Eco57I CTGAAG 2 cut(s) 716, 792
Eco72I CACGTG 1 cut(s) 77
Eco88I CYCGRG 1 cut(s) 475
Eco91I GGTNACC 1 cut(s) 1037
EcoO65I GGTNACC 1 cut(s) 1037
EgeI GGCGCC 1 cut(s) 866
EheI GGCGCC 1 cut(s) 866
FaeI CATG 5 cut(s) 47, 285, 295, 353, 750
FaqI GGGAC 1 cut(s) 286
FatI CATG 5 cut(s) 43, 281, 291, 349, 746
FbaI TGATCA 1 cut(s) 661
FblI GTMKAC 1 cut(s) 713
Fnu4HI GCNGC 3 cut(s) 103, 441, 798
FokI GGATG 2 cut(s) 646, 1081
Fsp4HI GCNGC 3 cut(s) 103, 441, 798
FspBI CTAG 1 cut(s) 1115
GlaI GCGC 2 cut(s) 866, 1009
GluI GCNGC 3 cut(s) 103, 441, 798
GsaI CCCAGC 1 cut(s) 633
HaeII RGCGCY 1 cut(s) 868
HaeIII GGCC 4 cut(s) 5, 105, 290, 443
HapII CCGG 2 cut(s) 155, 228
HgaI GACGC 1 cut(s) 100
HhaI GCGC 2 cut(s) 867, 1010
Hin1I GRCGYC 1 cut(s) 865
Hin1II CATG 5 cut(s) 47, 285, 295, 353, 750
Hin6I GCGC 2 cut(s) 865, 1008
HinP1I GCGC 2 cut(s) 865, 1008
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 3 cut(s) 727, 1129, 1137
HpaII CCGG 2 cut(s) 155, 228
Hpy166II GTNNAC 8 cut(s) 379, 524, 685, 714, 957, 1033, 1171, 1192
Hpy188I TCNGA 2 cut(s) 597, 911
Hpy188III TCNNGA 5 cut(s) 118, 496, 731, 770, 1154
Hpy8I GTNNAC 8 cut(s) 379, 524, 685, 714, 957, 1033, 1171, 1192
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 6 cut(s) 220, 280, 691, 753, 767, 934
HpyCH4III ACNGT 3 cut(s) 182, 396, 1037
HpyCH4IV ACGT 2 cut(s) 76, 1052
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 108, 1124
HpyF3I CTNAG 3 cut(s) 596, 1022, 1155
HpySE526I ACGT 2 cut(s) 76, 1052
Hsp92I GRCGYC 1 cut(s) 865
Hsp92II CATG 5 cut(s) 47, 285, 295, 353, 750
HspAI GCGC 2 cut(s) 865, 1008
KasI GGCGCC 1 cut(s) 864
Ksp22I TGATCA 1 cut(s) 661
KspI CCGCGG 1 cut(s) 103
Kzo9I GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
LmnI GCTCC 1 cut(s) 498
Lsp1109I GCAGC 1 cut(s) 809
LweI GCATC 2 cut(s) 195, 995
MaeI CTAG 1 cut(s) 1115
MaeII ACGT 2 cut(s) 76, 1052
MaeIII GTNAC 6 cut(s) 259, 644, 802, 830, 1037, 1102
MalI GATC 7 cut(s) 606, 642, 663, 768, 913, 1152, 1178
MboI GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
MboII GAAGA 6 cut(s) 47, 88, 106, 211, 320, 323
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 1 cut(s) 1194
MluCI AATT 4 cut(s) 622, 813, 975, 1098
Mly113I GGCGCC 1 cut(s) 865
MmeI TCCRAC 3 cut(s) 704, 1041, 1134
MseI TTAA 2 cut(s) 306, 782
MspA1I CMGCKG 1 cut(s) 102
MspCI CTTAAG 1 cut(s) 305
MspI CCGG 2 cut(s) 155, 228
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 3 cut(s) 53, 108, 1124
NarI GGCGCC 1 cut(s) 865
NdeII GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
NlaIII CATG 5 cut(s) 47, 285, 295, 353, 750
NlaIV GGNNCC 3 cut(s) 302, 692, 866
NmuCI GTSAC 3 cut(s) 259, 802, 830
PaeR7I CTCGAG 1 cut(s) 475
PcsI WCGNNNNNNNCGW 2 cut(s) 36, 87
PfeI GAWTC 3 cut(s) 727, 1129, 1137
PkrI GCNGC 3 cut(s) 104, 442, 799
PluTI GGCGCC 1 cut(s) 868
PmaCI CACGTG 1 cut(s) 77
PmlI CACGTG 1 cut(s) 77
Ppu21I YACGTR 1 cut(s) 77
Psp1406I AACGTT 1 cut(s) 1052
PspCI CACGTG 1 cut(s) 77
PspEI GGTNACC 1 cut(s) 1037
PspFI CCCAGC 1 cut(s) 629
PspN4I GGNNCC 3 cut(s) 302, 692, 866
PspPI GGNCC 4 cut(s) 300, 611, 853, 879
PspXI VCTCGAGB 1 cut(s) 475
PstI CTGCAG 1 cut(s) 994
PsuI RGATCY 1 cut(s) 604
RsaI GTAC 1 cut(s) 956
RsaNI GTAC 1 cut(s) 955
SacII CCGCGG 1 cut(s) 103
SaqAI TTAA 2 cut(s) 306, 782
SatI GCNGC 3 cut(s) 103, 441, 798
Sau3AI GATC 7 cut(s) 604, 640, 661, 766, 911, 1150, 1176
Sau96I GGNCC 4 cut(s) 300, 611, 853, 879
SduI GDGCHC 1 cut(s) 1194
SfaNI GCATC 2 cut(s) 195, 995
SfcI CTRYAG 1 cut(s) 990
SfoI GGCGCC 1 cut(s) 866
Sfr274I CTCGAG 1 cut(s) 475
Sfr303I CCGCGG 1 cut(s) 103
SgrBI CCGCGG 1 cut(s) 103
SinI GGWCC 4 cut(s) 300, 611, 853, 879
SlaI CTCGAG 1 cut(s) 475
SmlI CTYRAG 2 cut(s) 305, 475
SmoI CTYRAG 2 cut(s) 305, 475
Sse9I AATT 4 cut(s) 622, 813, 975, 1098
SsiI CCGC 4 cut(s) 100, 102, 141, 440
SspDI GGCGCC 1 cut(s) 864
SspI AATATT 3 cut(s) 564, 874, 1165
SspMI CTAG 1 cut(s) 1115
TaaI ACNGT 3 cut(s) 182, 396, 1037
TaiI ACGT 2 cut(s) 79, 1055
TaqI TCGA 4 cut(s) 90, 146, 476, 532
TaqII GACCGA 1 cut(s) 288
TasI AATT 4 cut(s) 622, 813, 975, 1098
TatI WGTACW 1 cut(s) 954
TauI GCSGC 2 cut(s) 105, 443
TfiI GAWTC 3 cut(s) 727, 1129, 1137
Tru1I TTAA 2 cut(s) 306, 782
Tru9I TTAA 2 cut(s) 306, 782
TscAI CASTG 4 cut(s) 518, 807, 1049, 1178
TseFI GTSAC 3 cut(s) 259, 802, 830
TseI GCWGC 1 cut(s) 797
Tsp45I GTSAC 3 cut(s) 259, 802, 830
TspDTI ATGAA 5 cut(s) 211, 338, 735, 916, 1084
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 4 cut(s) 518, 807, 1049, 1178
Vha464I CTTAAG 1 cut(s) 305
VneI GTGCAC 1 cut(s) 1190
VpaK11BI GGWCC 4 cut(s) 300, 611, 853, 879
XhoI CTCGAG 1 cut(s) 475
XmiI GTMKAC 1 cut(s) 713
XspI CTAG 1 cut(s) 1115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.