Rorug05G0503000

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0009103
Physical Location & Seq
Forward (+)
68548481 .. 68557060
8580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0503000.1

Sequence Viewer

Length: 3327 bp
ATGGCCTCGAGCAGCCAAAGAGCCTCTGAATCTTTTCCTTCAGCCAAGTCAACGGCTCTCAAGTGGAAGTATGATGTGTTTTTGAGTTTTAGGGGTGAAGACATTCGGAACAATTTTCTCTCTTATTTATACCATGAATTGCAAATCATCAGAAGGATTAATACATTCAAGGATGATGAAGAGCTTGAAGTCGGGGAGCCTATTTCTCCAAGTCTCCTTAAAGCAATTGATGAATCGAGGTTTGCTATTATTGTTCTGTCGCCAAACTATGCTTCTTCTCCATGGTGTTTGGAGGAACTTACAAAAATTATTCATTGCATGGAAGACACCAGGAGAATTCTGCCACTTTTTTATCATGTGGAACCAGCTGATGTACGACATCAAAAAAATAGTTTTGAAGTAGCCTTCACTAAGCATGAAGAAAAGTCAAGGCATGACACAGAGAAGGTGAAGCAGTGGAGAGATGCTTTAAAAAAAGTGGCTAATTTATCTGGATGGCATACGCAGAGATATCAGACAGAAAGAGAACTTGTTGAAGCCATTGCAGATTATGTGTGCACTAAGGTACGACCAATTGAAATGGAGTTCTCAAAGTCCACTGGAGATTTTGAAGCATTTGAAGCAACAAGGCAAGCCATGGATGAGGTCTGGAAGGCACTAAAAGATGATAAGGTCACTGCCATTGCGGTGTACGGAATGGGAGGTGTTGGGAAGACAACTATGGTAGAATATGTCGGTGTACAAGCTCAAAATAGTGGGATTTTCCATCATGTGATTATGGTTGTTATATCCCAAAGGCCCAACTTGAGAAATATCCAAGGCGCATTGGCAGATCTGCTGGGCCTTGAATTGAAGGAGGAGACAGACATTGGAAGAGCCAATAGACTGAAGAAGGAGATAATGAGAAGAAATAAGATCCTTATAATCTTGGATGACATTTGGGAGAGAATAGACTTGTCAAGCATAGGGATCCCCAGTTACGACAAGCTTCAGAAATGCAATTCAAAAGTCCTACTCACCACAAGGAGATTGAATGTTTGTCATTCTATGGAAACACAACCAAGCATTCCTCTCAATATCTTATCAGAAGAAGATTCTTGGAACTTGTTTGTGAAGAAAGCAAGAAAGTCTATCGAAAAATCAACTGAATTCTATGATGTAGCGAGGAAGGTAGCCAGCGAGTGTGCTGGTCTCCCTGTTGCACTGAGAGCAGTTGCGAGGGCACTTGGAGACAAAGATTTTGAGGAATGGAAAGAAGCAGCTCGAAAGCTGGAAATGTCTCAACGTGCTAGCCTCGATGATGATGGAGATGTGTTTAAATGTATAAAGTTAAGTTATGATTACTTGGACAGTATTGATGCCAAGTCATGCTTCTTGCTGTGCTGCCTATTCCCAGAAGATGATGATATCCTAATAGAAGACTTGATGAAGTATGGGTTTGGAAAAGGACTGTTTCGAGATGTCAACAGCACAATAGAAGATGCCAGAGTCAAAGCAAATTTAGTGACTAAATACCTTAAAGCTTCTTGTTTGCTTTTGGACGGTAAAGAGGATGGATGTGTAAGGATGCATGATGTCATTCGAGATATGGCCATGTCAATTGCATTATCTGAAGATGGCTATGGGTTTTTGGTAAAAACTCGTTGTGAATTGAAAGAATGGCCAATGGATGCACATGAGGGATACTCGGCAATCTCATTAATGGAGAACAACATTTCCAAGCTGCCTAATGAGTTGGTATGTTCAAAACTCCAAATTTTATTGTTACAGAGAAACATTGGTTTGAAAAATATCCCAGACACTTTTTTTCAGAGTCCCAAGGAATTAAAAGTCTTAGATCTTAGCCGCACCAATATTTTGTTAAGATCCCCATCATTCAATCTCATAACCAACCTCCAAGCTCTGTACTTAGATTATTGTGAGTCAATGATTGACATATCCATGCTTAAAAGCCTGAAAAAACTTGAGATTCTTAGTATAAGAGGATGTGATATTAAGGAATTTCCAAGAGAAATAGGACAACTGACCAATTTGAGGATGTTGGACCTCACTAATATTGGAGACATTGATACAGTTCCATCTCAAGTGATTTCGAGGTTGCACAGATTAGAAGAACTGTACATGAAGTGTAAATTTGGGGATTGGGGCAGTAAAGTTGAGGGAGGCTTATATTCTTTCTTTTTTGGTAAAAATGCTGGCTTTGAAGAGTTAACTGACTTGTCGCATCTAAACATTTTGGAGGTGTCCATATTTGGTCCAGAGTGCTTGCCTAAAACCGTTGAGTTCGATCCAAATTGGGTAAGCTTCGATATATGTATCAACAAAAACTCGTTTAGGGGAATATCCTCTCTGCAACGTGACCATTCACATCATCATTCAAGAACTCTGAGCCTTGACACAACCATCAATACATTACCGGATTGGTTTATCAACGTAGTGACAAAGAAAGCAGAGACGCTATTTTATTTCGAGTGCAAGGGCTTAAATAGCATTGTTGTAGAACATGACCATGGAAGACTACACAGACTGAAGCGGCTCGCTGTACATTCCAATGACAACTTGAAAGAGTTGTTGAACCTAACTACACGGGTCTCAAATGAACCTGTGTTTGAGAATTTGGAAGAATTGCATCTCAAGGACATGGGTTGCCTGAAGAAGTTATGTGTTGGTGAATTACCACTTGGGTCTCTACGGAAGCTGAAGGTATTGGACATCAGACAGTGTCGTGACTTGGTCGATGAACTTTTACCATCAAATTTACTGCAAATACTGCAAAATATGGAACAAATAATTTGTCATGATTTGAGGCAAATGAAATATGTGTTTGGATTTGAAGGGCTGAAGCCAGAACAGATTATCTTGACGAAATTGAGAAAGATGAGATTGTACAATCAACATAAGGTGTTACGCATATGGAAAGGTCCTGCTCCACATGCAGTCTTCCATAATCTTCGAAGTTTGACAGTTGACTACTACACTAAACTGAAATACCTCTTCACATCCAATGTTGCTCAATGTCTTTTGCATTTGGAAGACCTGTGGCTACAAAGTTGCAGTAGCTTAGACAGAATTGTTGAAGCAAGTGATGAGGAAATGATCGTCTTTCCAGAATTGAAGAACTTTATTTTGAAACATCTTCCACAGCTGAAAAGTTTTTGCAGTCCTATTTCAGTAGATATTGAATTCCCTTCATTGGAACACTTGTATGTGCGTGACTGCCCCCAGTTGATAATCTGTGCTTTTGACTTCAAAAGCAGGAACCATGTAAAACTGAATGATGAACAACATATGTCGTCTCTGTGCAGAAGGTTGTGGGATTTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

1108

Amino Acids

127.64

Weight (kDa)

6.24

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 23 - 195 1.4e-49 TIR domain
TIR_2 PF13676 26 - 130 5.6e-14 TIR domain
NB-ARC PF00931 211 - 375 9.3e-31 NB-ARC domain
LRR_8 PF13855 583 - 640 3.5e-06 Leucine rich repeat
LRR_14 PF23598 624 - 709 2.8e-09 Leucine-rich repeat region
LRR_RPS2 PF23247 872 - 1018 3e-24 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 923
AciI CCGC 3 cut(s) 686, 1846, 2533
AclWI GGATC 5 cut(s) 910, 964, 977, 1860, 2282
AcoI YGGCCR 2 cut(s) 1590, 1661
AcsI RAATTY 9 cut(s) 336, 1148, 1498, 1755, 2000, 2132, 2614, 2755, 3182
AcuI CTGAAG 8 cut(s) 24, 908, 974, 1632, 2549, 2672, 2720, 2861
AfaI GTAC 8 cut(s) 375, 567, 692, 741, 1907, 2120, 2544, 2888
AfiI CCNNNNNNNGG 2 cut(s) 2034, 3193
AjnI CCWGG 1 cut(s) 329
AjuI GAANNNNNNNTTGG 6 cut(s) 256, 288, 1355, 1387, 2664, 2696
AloI GAACNNNNNNTCC 2 cut(s) 1700, 1732
Alw21I GWGCWC 1 cut(s) 560
Alw44I GTGCAC 1 cut(s) 556
AlwI GGATC 5 cut(s) 910, 964, 977, 1860, 2282
Ama87I CYCGRG 1 cut(s) 7
AoxI GGCC 5 cut(s) 3, 797, 841, 1590, 1661
ApaLI GTGCAC 1 cut(s) 556
ApeKI GCWGC 4 cut(s) 12, 1259, 1383, 1723
ApoI RAATTY 9 cut(s) 336, 1148, 1498, 1755, 2000, 2132, 2614, 2755, 3182
ArsI GACNNNNNNTTYG 4 cut(s) 1223, 1255, 2779, 2811
AseI ATTAAT 2 cut(s) 159, 1700
Asp700I GAANNNNTTC 2 cut(s) 33, 102
AspLEI GCGC 1 cut(s) 824
AspS9I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
AsuHPI GGTGA 4 cut(s) 107, 460, 1009, 2681
AsuII TTCGAA 1 cut(s) 2953
AsuNHI GCTAGC 1 cut(s) 1289
AvaI CYCGRG 1 cut(s) 7
AvaII GGWCC 3 cut(s) 2044, 2255, 2921
BaeGI GKGCMC 2 cut(s) 560, 1225
BalI TGGCCA 2 cut(s) 1592, 1663
BamHI GGATCC 1 cut(s) 969
BarI GAAGNNNNNNTAC 2 cut(s) 145, 177
BbsI GAAGAC 7 cut(s) 105, 330, 719, 1425, 2521, 2932, 3039
Bbv12I GWGCWC 1 cut(s) 560
BbvI GCAGC 4 cut(s) 24, 1271, 1370, 1710
BccI CCATC 9 cut(s) 489, 774, 1298, 1547, 1610, 1879, 2086, 2411, 2758
BceAI ACGGC 1 cut(s) 69
BciT130I CCWGG 1 cut(s) 331
BciVI GTATCC 1 cut(s) 1676
BfaI CTAG 1 cut(s) 1290
BfuI GTATCC 1 cut(s) 1676
BglII AGATCT 2 cut(s) 832, 1837
BisI GCNGC 6 cut(s) 13, 1260, 1384, 1724, 1846, 2534
BlsI GCNGC 6 cut(s) 14, 1261, 1385, 1725, 1847, 2535
Bme1390I CCNGG 1 cut(s) 331
Bme18I GGWCC 3 cut(s) 2044, 2255, 2921
BmeT110I CYCGRG 1 cut(s) 7
BmgT120I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
BmiI GGNNCC 4 cut(s) 198, 363, 971, 3260
BmrFI CCNGG 1 cut(s) 331
BmrI ACTGGG 2 cut(s) 969, 3217
BmsI GCATC 7 cut(s) 454, 1348, 1471, 1557, 1660, 2233, 2638
BmtI GCTAGC 1 cut(s) 1293
BmuI ACTGGG 2 cut(s) 969, 3217
BpiI GAAGAC 7 cut(s) 105, 330, 719, 1425, 2521, 2932, 3039
BplI GAGNNNNNCTC 2 cut(s) 1670, 1702
BpmI CTGGAG 1 cut(s) 621
Bpu14I TTCGAA 1 cut(s) 2953
BpuEI CTTGAG 5 cut(s) 44, 826, 1985, 2067, 2618
BsaBI GATNNNNATC 1 cut(s) 1870
BsaI GGTCTC 3 cut(s) 1196, 2596, 2691
BsaJI CCNNGG 5 cut(s) 281, 636, 817, 1818, 2509
BsaWI WCCGGW 1 cut(s) 2416
Bsc4I CCNNNNNNNGG 2 cut(s) 2034, 3193
Bse1I ACTGG 3 cut(s) 604, 975, 3223
Bse3DI GCAATG 3 cut(s) 313, 540, 681
Bse8I GATNNNNATC 1 cut(s) 1870
BseBI CCWGG 1 cut(s) 331
BseDI CCNNGG 5 cut(s) 281, 636, 817, 1818, 2509
BseJI GATNNNNATC 1 cut(s) 1870
BseLI CCNNNNNNNGG 2 cut(s) 2034, 3193
BseMI GCAATG 3 cut(s) 313, 540, 681
BseMII CTCAG 2 cut(s) 1196, 2378
BseNI ACTGG 3 cut(s) 604, 975, 3223
BseRI GAGGAG 1 cut(s) 872
BseSI GKGCMC 2 cut(s) 560, 1225
BseXI GCAGC 4 cut(s) 24, 1271, 1370, 1710
BseYI CCCAGC 1 cut(s) 838
BsgI GTGCAG 1 cut(s) 3322
BshFI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
BsiHKAI GWGCWC 1 cut(s) 560
BsiHKCI CYCGRG 1 cut(s) 7
BsiSI CCGG 1 cut(s) 2417
BslFI GGGAC 1 cut(s) 1800
BslI CCNNNNNNNGG 2 cut(s) 2034, 3193
BsmBI CGTCTC 2 cut(s) 2447, 3300
BsmFI GGGAC 1 cut(s) 1800
BsmI GAATGC 1 cut(s) 1065
BsnI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
Bso31I GGTCTC 3 cut(s) 1196, 2596, 2691
BsoBI CYCGRG 1 cut(s) 7
Bsp119I TTCGAA 1 cut(s) 2953
Bsp1286I GDGCHC 2 cut(s) 560, 1225
Bsp1407I TGTACA 4 cut(s) 739, 2118, 2542, 2886
Bsp143I GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
Bsp19I CCATGG 3 cut(s) 281, 636, 2509
BspACI CCGC 3 cut(s) 686, 1846, 2533
BspANI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
BspCNI CTCAG 2 cut(s) 1197, 2379
BspHI TCATGA 1 cut(s) 2797
BspLI GGNNCC 4 cut(s) 198, 363, 971, 3260
BspOI GCTAGC 1 cut(s) 1293
BspPI GGATC 5 cut(s) 910, 964, 977, 1860, 2282
BspQI GCTCTTC 2 cut(s) 174, 868
BspT104I TTCGAA 1 cut(s) 2953
BspTNI GGTCTC 3 cut(s) 1196, 2596, 2691
BsrDI GCAATG 3 cut(s) 313, 540, 681
BsrGI TGTACA 4 cut(s) 739, 2118, 2542, 2886
BsrI ACTGG 3 cut(s) 604, 975, 3223
BssECI CCNNGG 5 cut(s) 281, 636, 817, 1818, 2509
BssMI GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
BssT1I CCWWGG 5 cut(s) 281, 636, 817, 1818, 2509
Bst2UI CCWGG 1 cut(s) 331
Bst4CI ACNGT 8 cut(s) 1352, 1452, 1544, 2074, 2118, 2278, 2721, 2965
Bst6I CTCTTC 4 cut(s) 174, 868, 2199, 2999
BstAPI GCANNNNNTGC 1 cut(s) 2770
BstAUI TGTACA 4 cut(s) 739, 2118, 2542, 2886
BstBI TTCGAA 1 cut(s) 2953
BstC8I GCNNGC 6 cut(s) 633, 1177, 1291, 2197, 2267, 2538
BstDEI CTNAG 9 cut(s) 411, 561, 1205, 1834, 1841, 1909, 1973, 2387, 3061
BstDSI CCRYGG 3 cut(s) 281, 636, 2509
BstHHI GCGC 1 cut(s) 824
BstKTI GATC 7 cut(s) 835, 918, 972, 1840, 1868, 2290, 3099
BstMBI GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
BstMWI GCNNNNNNNGC 5 cut(s) 620, 1208, 2487, 2770, 2933
BstNI CCWGG 1 cut(s) 331
BstNSI RCATGY 1 cut(s) 2936
BstSCI CCNGG 1 cut(s) 329
BstSLI GKGCMC 2 cut(s) 560, 1225
BstV1I GCAGC 4 cut(s) 24, 1271, 1370, 1710
BstV2I GAAGAC 7 cut(s) 105, 330, 719, 1425, 2521, 2932, 3039
BstX2I RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
BstYI RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
BsuI GTATCC 1 cut(s) 1676
BsuRI GGCC 5 cut(s) 5, 799, 843, 1592, 1663
BtgI CCRYGG 3 cut(s) 281, 636, 2509
BtsI GCAGTG 2 cut(s) 461, 675
BtsIMutI CAGTG 5 cut(s) 461, 597, 675, 1202, 2726
Cac8I GCNNGC 6 cut(s) 633, 1177, 1291, 2197, 2267, 2538
CciI TCATGA 1 cut(s) 2797
CfoI GCGC 1 cut(s) 824
Cfr13I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
CseI GACGC 1 cut(s) 2464
Csp6I GTAC 8 cut(s) 374, 566, 691, 740, 1906, 2119, 2543, 2887
CviQI GTAC 8 cut(s) 374, 566, 691, 740, 1906, 2119, 2543, 2887
DdeI CTNAG 9 cut(s) 411, 561, 1205, 1834, 1841, 1909, 1973, 2387, 3061
DpnI GATC 7 cut(s) 834, 917, 971, 1839, 1867, 2289, 3098
DpnII GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
DraI TTTAAA 2 cut(s) 471, 1318
EaeI YGGCCR 2 cut(s) 1590, 1661
Eam1104I CTCTTC 4 cut(s) 174, 868, 2199, 2999
EarI CTCTTC 4 cut(s) 174, 868, 2199, 2999
Eco130I CCWWGG 5 cut(s) 281, 636, 817, 1818, 2509
Eco31I GGTCTC 3 cut(s) 1196, 2596, 2691
Eco32I GATATC 2 cut(s) 512, 1408
Eco47I GGWCC 3 cut(s) 2044, 2255, 2921
Eco57I CTGAAG 8 cut(s) 24, 908, 974, 1632, 2549, 2672, 2720, 2861
Eco88I CYCGRG 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 2921
EcoRI GAATTC 3 cut(s) 336, 1148, 3182
EcoRII CCWGG 1 cut(s) 329
EcoRV GATATC 2 cut(s) 512, 1408
EcoT14I CCWWGG 5 cut(s) 281, 636, 817, 1818, 2509
EcoT22I ATGCAT 1 cut(s) 1572
ErhI CCWWGG 5 cut(s) 281, 636, 817, 1818, 2509
Esp3I CGTCTC 2 cut(s) 2447, 3300
FalI AAGNNNNNCTT 2 cut(s) 1355, 1387
FaqI GGGAC 1 cut(s) 1800
FauNDI CATATG 2 cut(s) 2912, 3288
Fnu4HI GCNGC 6 cut(s) 13, 1260, 1384, 1724, 1846, 2534
Fsp4HI GCNGC 6 cut(s) 13, 1260, 1384, 1724, 1846, 2534
FspBI CTAG 1 cut(s) 1290
GlaI GCGC 1 cut(s) 823
GluI GCNGC 6 cut(s) 13, 1260, 1384, 1724, 1846, 2534
GsaI CCCAGC 1 cut(s) 842
GsuI CTGGAG 1 cut(s) 621
HaeIII GGCC 5 cut(s) 5, 799, 843, 1592, 1663
HapII CCGG 1 cut(s) 2417
HgaI GACGC 1 cut(s) 2464
HhaI GCGC 1 cut(s) 824
Hin6I GCGC 1 cut(s) 822
HinP1I GCGC 1 cut(s) 822
HincII GTYRAC 4 cut(s) 51, 1465, 2211, 2968
HindII GTYRAC 4 cut(s) 51, 1465, 2211, 2968
HindIII AAGCTT 3 cut(s) 986, 1521, 2302
HinfI GANTC 7 cut(s) 29, 233, 1094, 1488, 1813, 1922, 1969
HpaI GTTAAC 1 cut(s) 2211
HpaII CCGG 1 cut(s) 2417
HphI GGTGA 4 cut(s) 107, 460, 1009, 2681
Hpy166II GTNNAC 8 cut(s) 51, 558, 597, 691, 740, 1465, 2211, 2968
Hpy8I GTNNAC 8 cut(s) 51, 558, 597, 691, 740, 1465, 2211, 2968
HpyCH4III ACNGT 8 cut(s) 1352, 1452, 1544, 2074, 2118, 2278, 2721, 2965
HpyCH4IV ACGT 3 cut(s) 1285, 2356, 2433
HpyF10VI GCNNNNNNNGC 5 cut(s) 620, 1208, 2487, 2770, 2933
HpyF3I CTNAG 9 cut(s) 411, 561, 1205, 1834, 1841, 1909, 1973, 2387, 3061
HpySE526I ACGT 3 cut(s) 1285, 2356, 2433
HspAI GCGC 1 cut(s) 822
KspAI GTTAAC 1 cut(s) 2211
Kzo9I GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
LguI GCTCTTC 2 cut(s) 174, 868
LmnI GCTCC 2 cut(s) 196, 2932
Lsp1109I GCAGC 4 cut(s) 24, 1271, 1370, 1710
LweI GCATC 7 cut(s) 454, 1348, 1471, 1557, 1660, 2233, 2638
MaeI CTAG 1 cut(s) 1290
MaeII ACGT 3 cut(s) 1285, 2356, 2433
MaeIII GTNAC 9 cut(s) 673, 977, 1504, 1764, 2357, 2437, 2726, 2904, 3212
MalI GATC 7 cut(s) 834, 917, 971, 1839, 1867, 2289, 3098
MboI GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
MfeI CAATTG 3 cut(s) 225, 573, 1599
MflI RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
MhlI GDGCHC 2 cut(s) 560, 1225
MlsI TGGCCA 2 cut(s) 1592, 1663
MluNI TGGCCA 2 cut(s) 1592, 1663
MlyI GAGTC 3 cut(s) 1497, 1822, 1931
MmeI TCCRAC 1 cut(s) 2022
Mox20I TGGCCA 2 cut(s) 1592, 1663
Mph1103I ATGCAT 1 cut(s) 1572
MroXI GAANNNNTTC 2 cut(s) 33, 102
MscI TGGCCA 2 cut(s) 1592, 1663
MslI CAYNNNNRTG 5 cut(s) 686, 1940, 2508, 2550, 3204
Msp20I TGGCCA 2 cut(s) 1592, 1663
MspA1I CMGCKG 2 cut(s) 368, 3145
MspI CCGG 1 cut(s) 2417
MspR9I CCNGG 1 cut(s) 331
MunI CAATTG 3 cut(s) 225, 573, 1599
Mva1269I GAATGC 1 cut(s) 1065
MvaI CCWGG 1 cut(s) 331
MwoI GCNNNNNNNGC 5 cut(s) 620, 1208, 2487, 2770, 2933
NcoI CCATGG 3 cut(s) 281, 636, 2509
NdeI CATATG 2 cut(s) 2912, 3288
NdeII GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
NheI GCTAGC 1 cut(s) 1289
NlaIV GGNNCC 4 cut(s) 198, 363, 971, 3260
NmeAIII GCCGAG 1 cut(s) 1667
NmuCI GTSAC 6 cut(s) 673, 1504, 2357, 2437, 2726, 3212
NsiI ATGCAT 1 cut(s) 1572
NspI RCATGY 1 cut(s) 2936
NspV TTCGAA 1 cut(s) 2953
PaeR7I CTCGAG 1 cut(s) 7
PagI TCATGA 1 cut(s) 2797
PciSI GCTCTTC 2 cut(s) 174, 868
PctI GAATGC 1 cut(s) 1065
PdmI GAANNNNTTC 2 cut(s) 33, 102
PfeI GAWTC 4 cut(s) 29, 233, 1094, 1969
PflFI GACNNNGTC 2 cut(s) 2721, 2732
PkrI GCNGC 6 cut(s) 14, 1261, 1385, 1725, 1847, 2535
PleI GAGTC 3 cut(s) 1496, 1821, 1930
PpsI GAGTC 3 cut(s) 1496, 1821, 1930
PpuMI RGGWCCY 1 cut(s) 2921
PshBI ATTAAT 2 cut(s) 159, 1700
PsiI TTATAA 1 cut(s) 923
Psp5II RGGWCCY 1 cut(s) 2921
Psp6I CCWGG 1 cut(s) 329
PspFI CCCAGC 1 cut(s) 838
PspGI CCWGG 1 cut(s) 329
PspN4I GGNNCC 4 cut(s) 198, 363, 971, 3260
PspPI GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
PspPPI RGGWCCY 1 cut(s) 2921
PspXI VCTCGAGB 1 cut(s) 7
PsuI RGATCY 5 cut(s) 832, 915, 969, 1837, 1865
PsyI GACNNNGTC 2 cut(s) 2721, 2732
PvuII CAGCTG 2 cut(s) 368, 3145
RsaI GTAC 8 cut(s) 375, 567, 692, 741, 1907, 2120, 2544, 2888
RsaNI GTAC 8 cut(s) 374, 566, 691, 740, 1906, 2119, 2543, 2887
RseI CAYNNNNRTG 5 cut(s) 686, 1940, 2508, 2550, 3204
SapI GCTCTTC 2 cut(s) 174, 868
SatI GCNGC 6 cut(s) 13, 1260, 1384, 1724, 1846, 2534
Sau3AI GATC 7 cut(s) 832, 915, 969, 1837, 1865, 2287, 3096
Sau96I GGNCC 5 cut(s) 798, 841, 2044, 2255, 2921
SchI GAGTC 3 cut(s) 1497, 1822, 1931
ScrFI CCNGG 1 cut(s) 331
SduI GDGCHC 2 cut(s) 560, 1225
SfaNI GCATC 7 cut(s) 454, 1348, 1471, 1557, 1660, 2233, 2638
Sfr274I CTCGAG 1 cut(s) 7
SfuI TTCGAA 1 cut(s) 2953
SinI GGWCC 3 cut(s) 2044, 2255, 2921
SlaI CTCGAG 1 cut(s) 7
SmiMI CAYNNNNRTG 5 cut(s) 686, 1940, 2508, 2550, 3204
SmlI CTYRAG 6 cut(s) 7, 59, 805, 1964, 2082, 2633
SmoI CTYRAG 6 cut(s) 7, 59, 805, 1964, 2082, 2633
SsiI CCGC 3 cut(s) 686, 1846, 2533
SspI AATATT 2 cut(s) 1855, 2056
SspMI CTAG 1 cut(s) 1290
StyD4I CCNGG 1 cut(s) 329
StyI CCWWGG 5 cut(s) 281, 636, 817, 1818, 2509
TaaI ACNGT 8 cut(s) 1352, 1452, 1544, 2074, 2118, 2278, 2721, 2965
TaiI ACGT 3 cut(s) 1288, 2359, 2436
TatI WGTACW 5 cut(s) 739, 1905, 2118, 2542, 2886
TauI GCSGC 2 cut(s) 1848, 2536
TfiI GAWTC 4 cut(s) 29, 233, 1094, 1969
TscAI CASTG 5 cut(s) 461, 604, 682, 1209, 2726
TseFI GTSAC 6 cut(s) 673, 1504, 2357, 2437, 2726, 3212
TseI GCWGC 4 cut(s) 12, 1259, 1383, 1723
Tsp45I GTSAC 6 cut(s) 673, 1504, 2357, 2437, 2726, 3212
TspGWI ACGGA 2 cut(s) 708, 2707
TspRI CASTG 5 cut(s) 461, 604, 682, 1209, 2726
Tth111I GACNNNGTC 2 cut(s) 2721, 2732
VneI GTGCAC 1 cut(s) 556
VpaK11BI GGWCC 3 cut(s) 2044, 2255, 2921
VspI ATTAAT 2 cut(s) 159, 1700
XapI RAATTY 9 cut(s) 336, 1148, 1498, 1755, 2000, 2132, 2614, 2755, 3182
XceI RCATGY 1 cut(s) 2936
XhoI CTCGAG 1 cut(s) 7
XmnI GAANNNNTTC 2 cut(s) 33, 102
XspI CTAG 1 cut(s) 1290
Zsp2I ATGCAT 1 cut(s) 1572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.