Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009103

Physical Location & Seq

Genomic Coordinates Forward (+)

828723 .. 831581

Gene Structure 2859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G010500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 753 bp

ATGGCCTGTCATTGTGCTTATTATGTATTTCCACCATCACCACTGAGGAAGAACTTGTACAAGACCACTACCCTTCTCTCATCAAAAAGACCCAAGTCTCTTTTGCTTTCTGCCATCAGCAACAATAGAGACTCTTACAATACTTTGGTTTCTGAGGCTGTTAGTCTTTTGGGTCCAGCAACATTCGACGCTTCAAAGCTCAAAGTTGAATTTATAGGAGAAGAGTTCAATAATTATGTAGGAATCATCCCAAGAACTTACATCCTATCACATTGTGACTTCACAGCTAACCTGACCTTAACGATCTCCAATGTCATCAACCTCGATCAGTTGAAAGGATGGTACAGCAAGGATGACGTGGTTGCAGAATGGAAAAGGGTGAATGGTGAAATGTGCCTACATATTCATTGCTATGTGAGCGGTCCCAATCTCATGCTGGACCTGGCCGCAGAGTTCAGATATCACATATTCTCCAAAGAAATGCCTTTGGTACTCAAAGCTGTGTTACATGGAGACTCTCTACTTTTCAGAGAGCATCCTGAGCTAGTGGATGCCATGGTTCGGGTTTATTTTCATTCCAATTTGAAGAAGTACAATAGAATTGAATGCTGGGGGCCTCTCAAGGATGCTGTAGAGGGAAGACAAGGGGATCATACCAAAGGAATAACTGCACATATGGATTCTTCCCATCCTCAGGTCAAGCAGCGAACGCCAAAATCCATATTTCAAGTTCTATTTGCATTCCTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00860 ko01110 map00860 map01110

Pfam Domains

Protein Families

Staygreen

Protein Analysis

251

Amino Acids

28.47

Weight (kDa)

8.65

Isoelectric Point (pI)

35.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44000
fragaria_vesca	FvH4_2g01060 FvH4_2g01060 FvH4_2g05260
malus_domestica	MD05G1008700.v1.1
prunus_persica	Prupe.8G010500_v2.0.a1 Prupe.8G010500_v2.0.a1 Prupe.8G010500_v2.0.a1 Prupe.8G010500_v2.0.a1
pyrus_communis	pycom05g00440
rosa_chinensis	RchiOBHm_Chr6g0251541
rosa_laevigata	RLG00000015460
rosa_multiflora	Rmu_sc0001382.1_g000021 Rmu_sc0006171.1_g000003
rosa_roxburghii	Rroxscaffold_7G00216600
rosa_rugosa	Rorug05G0503000
rosa_samantha	Rh6AG011700 Rh6BG000400 Rh6BG010500 Rh6CG009100 Rh6DG010100
rosa_wichuraiana	Rw6G001350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	420
AciI	CCGC	2 cut(s)	420, 447
AclWI	GGATC	1 cut(s)	657
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	1 cut(s)	209
AdeI	CACNNNGTG	1 cut(s)	275
AfaI	GTAC	4 cut(s)	59, 344, 492, 593
AfiI	CCNNNNNNNGG	2 cut(s)	561, 694
AgsI	TTSAA	7 cut(s)	195, 209, 229, 334, 586, 605, 728
AjiI	CACGTC	1 cut(s)	358
AjnI	CCWGG	1 cut(s)	441
AluBI	AGCT	4 cut(s)	199, 287, 500, 544
AluI	AGCT	4 cut(s)	199, 287, 500, 544
Alw26I	GTCTC	3 cut(s)	102, 123, 507
AlwI	GGATC	1 cut(s)	657
AoxI	GGCC	3 cut(s)	3, 444, 614
ApeKI	GCWGC	1 cut(s)	703
ApoI	RAATTY	1 cut(s)	209
AspS9I	GGNCC	4 cut(s)	173, 422, 439, 614
AsuHPI	GGTGA	3 cut(s)	30, 391, 398
AvaII	GGWCC	3 cut(s)	173, 422, 439
AxyI	CCTNAGG	1 cut(s)	693
BarI	GAAGNNNNNNTAC	2 cut(s)	41, 73
BbsI	GAAGAC	1 cut(s)	646
BbvI	GCAGC	1 cut(s)	715
BccI	CCATC	4 cut(s)	43, 122, 333, 696
BciT130I	CCWGG	1 cut(s)	443
BcoDI	GTCTC	3 cut(s)	102, 123, 507
BfaI	CTAG	1 cut(s)	545
BfmI	CTRYAG	1 cut(s)	630
BisI	GCNGC	2 cut(s)	447, 704
BlsI	GCNGC	2 cut(s)	448, 705
Bme1390I	CCNGG	1 cut(s)	443
Bme18I	GGWCC	3 cut(s)	173, 422, 439
BmgBI	CACGTC	1 cut(s)	358
BmgT120I	GGNCC	4 cut(s)	173, 422, 439, 614
BmiI	GGNNCC	3 cut(s)	174, 424, 615
BmrFI	CCNGG	1 cut(s)	443
BmsI	GCATC	3 cut(s)	541, 544, 616
BoxI	GACNNNNGTC	1 cut(s)	94
BpiI	GAAGAC	1 cut(s)	646
Bpu10I	CCTNAGC	1 cut(s)	540
BpuEI	CTTGAG	1 cut(s)	605
BsaJI	CCNNGG	1 cut(s)	555
BsaXI	ACNNNNNCTCC	2 cut(s)	455, 485
Bsc4I	CCNNNNNNNGG	2 cut(s)	561, 694
Bse21I	CCTNAGG	1 cut(s)	693
Bse3DI	GCAATG	1 cut(s)	406
BseBI	CCWGG	1 cut(s)	443
BseDI	CCNNGG	1 cut(s)	555
BseGI	GGATG	8 cut(s)	246, 261, 344, 358, 535, 556, 631, 688
BseLI	CCNNNNNNNGG	2 cut(s)	561, 694
BseMI	GCAATG	1 cut(s)	406
BseMII	CTCAG	4 cut(s)	35, 144, 531, 707
BseXI	GCAGC	1 cut(s)	715
BseYI	CCCAGC	1 cut(s)	609
BsgI	GTGCAG	1 cut(s)	654
BshFI	GGCC	3 cut(s)	5, 446, 616
BslFI	GGGAC	1 cut(s)	408
BslI	CCNNNNNNNGG	2 cut(s)	561, 694
BsmAI	GTCTC	3 cut(s)	102, 123, 507
BsmFI	GGGAC	1 cut(s)	408
BsmI	GAATGC	2 cut(s)	611, 740
BsnI	GGCC	3 cut(s)	5, 446, 616
Bsp1407I	TGTACA	1 cut(s)	57
Bsp143I	GATC	3 cut(s)	303, 325, 649
Bsp19I	CCATGG	1 cut(s)	555
BspACI	CCGC	2 cut(s)	420, 447
BspANI	GGCC	3 cut(s)	5, 446, 616
BspCNI	CTCAG	4 cut(s)	36, 145, 532, 706
BspLI	GGNNCC	3 cut(s)	174, 424, 615
BspPI	GGATC	1 cut(s)	657
BsrBI	CCGCTC	1 cut(s)	420
BsrDI	GCAATG	1 cut(s)	406
BsrGI	TGTACA	1 cut(s)	57
BssECI	CCNNGG	1 cut(s)	555
BssMI	GATC	3 cut(s)	303, 325, 649
BssT1I	CCWWGG	1 cut(s)	555
Bst2UI	CCWGG	1 cut(s)	443
Bst6I	CTCTTC	1 cut(s)	216
BstAUI	TGTACA	1 cut(s)	57
BstDEI	CTNAG	4 cut(s)	44, 153, 540, 693
BstDSI	CCRYGG	1 cut(s)	555
BstF5I	GGATG	8 cut(s)	246, 261, 344, 358, 535, 556, 631, 688
BstKTI	GATC	3 cut(s)	306, 328, 652
BstMAI	GTCTC	3 cut(s)	102, 123, 507
BstMBI	GATC	3 cut(s)	303, 325, 649
BstMWI	GCNNNNNNNGC	3 cut(s)	417, 541, 709
BstNI	CCWGG	1 cut(s)	443
BstPAI	GACNNNNGTC	1 cut(s)	94
BstSCI	CCNGG	1 cut(s)	441
BstSFI	CTRYAG	1 cut(s)	630
BstV1I	GCAGC	1 cut(s)	715
BstV2I	GAAGAC	1 cut(s)	646
Bsu36I	CCTNAGG	1 cut(s)	693
BsuRI	GGCC	3 cut(s)	5, 446, 616
BtgI	CCRYGG	1 cut(s)	555
BtrI	CACGTC	1 cut(s)	358
BtsCI	GGATG	8 cut(s)	246, 261, 344, 358, 535, 556, 631, 688
BtsIMutI	CAGTG	1 cut(s)	41
Cfr13I	GGNCC	4 cut(s)	173, 422, 439, 614
CseI	GACGC	1 cut(s)	197
Csp6I	GTAC	4 cut(s)	58, 343, 491, 592
CviAII	CATG	3 cut(s)	433, 509, 556
CviJI	RGCY	8 cut(s)	5, 158, 199, 287, 446, 500, 544, 616
CviKI_1	RGCY	8 cut(s)	5, 158, 199, 287, 446, 500, 544, 616
CviQI	GTAC	4 cut(s)	58, 343, 491, 592
DdeI	CTNAG	4 cut(s)	44, 153, 540, 693
DpnI	GATC	3 cut(s)	305, 327, 651
DpnII	GATC	3 cut(s)	303, 325, 649
DraIII	CACNNNGTG	1 cut(s)	275
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	1 cut(s)	216
EarI	CTCTTC	1 cut(s)	216
Eco130I	CCWWGG	1 cut(s)	555
Eco32I	GATATC	1 cut(s)	461
Eco47I	GGWCC	3 cut(s)	173, 422, 439
Eco81I	CCTNAGG	1 cut(s)	693
EcoO109I	RGGNCCY	1 cut(s)	614
EcoRII	CCWGG	1 cut(s)	441
EcoRV	GATATC	1 cut(s)	461
EcoT14I	CCWWGG	1 cut(s)	555
ErhI	CCWWGG	1 cut(s)	555
FaeI	CATG	3 cut(s)	436, 512, 559
FaqI	GGGAC	1 cut(s)	408
FatI	CATG	3 cut(s)	432, 508, 555
FauNDI	CATATG	1 cut(s)	675
Fnu4HI	GCNGC	2 cut(s)	447, 704
FokI	GGATG	8 cut(s)	233, 248, 351, 365, 522, 563, 638, 675
Fsp4HI	GCNGC	2 cut(s)	447, 704
FspBI	CTAG	1 cut(s)	545
GluI	GCNGC	2 cut(s)	447, 704
GsaI	CCCAGC	1 cut(s)	613
HaeIII	GGCC	3 cut(s)	5, 446, 616
HgaI	GACGC	1 cut(s)	197
Hin1II	CATG	3 cut(s)	436, 512, 559
HinfI	GANTC	4 cut(s)	131, 243, 515, 680
HphI	GGTGA	3 cut(s)	30, 391, 398
Hpy188I	TCNGA	3 cut(s)	154, 458, 530
Hpy188III	TCNNGA	1 cut(s)	539
Hpy99I	CGWCG	1 cut(s)	191
HpyAV	CCTTC	1 cut(s)	83
HpyCH4IV	ACGT	1 cut(s)	357
HpyCH4V	TGCA	3 cut(s)	365, 671, 740
HpyF10VI	GCNNNNNNNGC	3 cut(s)	417, 541, 709
HpyF3I	CTNAG	4 cut(s)	44, 153, 540, 693
HpySE526I	ACGT	1 cut(s)	357
Hsp92II	CATG	3 cut(s)	436, 512, 559
Kzo9I	GATC	3 cut(s)	303, 325, 649
LpnPI	CCDG	9 cut(s)	19, 189, 305, 422, 428, 455, 552, 595, 680
Lsp1109I	GCAGC	1 cut(s)	715
LweI	GCATC	3 cut(s)	541, 544, 616
MaeI	CTAG	1 cut(s)	545
MaeII	ACGT	1 cut(s)	357
MaeIII	GTNAC	2 cut(s)	275, 504
MalI	GATC	3 cut(s)	305, 327, 651
MbiI	CCGCTC	1 cut(s)	420
MboI	GATC	3 cut(s)	303, 325, 649
MboII	GAAGA	5 cut(s)	61, 233, 598, 651, 675
MluCI	AATT	4 cut(s)	209, 232, 580, 600
MlyI	GAGTC	2 cut(s)	125, 509
MnlI	CCTC	6 cut(s)	39, 148, 332, 627, 628, 702
MseI	TTAA	1 cut(s)	299
MslI	CAYNNNNRTG	1 cut(s)	411
MspR9I	CCNGG	1 cut(s)	443
Mva1269I	GAATGC	2 cut(s)	611, 740
MvaI	CCWGG	1 cut(s)	443
MwoI	GCNNNNNNNGC	3 cut(s)	417, 541, 709
NcoI	CCATGG	1 cut(s)	555
NdeI	CATATG	1 cut(s)	675
NdeII	GATC	3 cut(s)	303, 325, 649
NlaIII	CATG	3 cut(s)	436, 512, 559
NlaIV	GGNNCC	3 cut(s)	174, 424, 615
NmuCI	GTSAC	1 cut(s)	275
PctI	GAATGC	2 cut(s)	611, 740
PfeI	GAWTC	2 cut(s)	243, 680
PkrI	GCNGC	2 cut(s)	448, 705
PleI	GAGTC	2 cut(s)	125, 509
PpsI	GAGTC	2 cut(s)	125, 509
PshAI	GACNNNNGTC	1 cut(s)	94
Psp6I	CCWGG	1 cut(s)	441
PspFI	CCCAGC	1 cut(s)	609
PspGI	CCWGG	1 cut(s)	441
PspN4I	GGNNCC	3 cut(s)	174, 424, 615
PspPI	GGNCC	4 cut(s)	173, 422, 439, 614
RsaI	GTAC	4 cut(s)	59, 344, 492, 593
RsaNI	GTAC	4 cut(s)	58, 343, 491, 592
RseI	CAYNNNNRTG	1 cut(s)	411
SaqAI	TTAA	1 cut(s)	299
SatI	GCNGC	2 cut(s)	447, 704
Sau3AI	GATC	3 cut(s)	303, 325, 649
Sau96I	GGNCC	4 cut(s)	173, 422, 439, 614
SchI	GAGTC	2 cut(s)	125, 509
ScrFI	CCNGG	1 cut(s)	443
SfaNI	GCATC	3 cut(s)	541, 544, 616
SfcI	CTRYAG	1 cut(s)	630
SinI	GGWCC	3 cut(s)	173, 422, 439
SmiMI	CAYNNNNRTG	1 cut(s)	411
SmlI	CTYRAG	1 cut(s)	620
SmoI	CTYRAG	1 cut(s)	620
Sse9I	AATT	4 cut(s)	209, 232, 580, 600
SsiI	CCGC	2 cut(s)	420, 447
SspMI	CTAG	1 cut(s)	545
StyD4I	CCNGG	1 cut(s)	441
StyI	CCWWGG	1 cut(s)	555
TaiI	ACGT	1 cut(s)	360
TaqI	TCGA	2 cut(s)	186, 324
TasI	AATT	4 cut(s)	209, 232, 580, 600
TatI	WGTACW	2 cut(s)	57, 591
TauI	GCSGC	1 cut(s)	449
TfiI	GAWTC	2 cut(s)	243, 680
Tru1I	TTAA	1 cut(s)	299
Tru9I	TTAA	1 cut(s)	299
TscAI	CASTG	1 cut(s)	48
TseFI	GTSAC	1 cut(s)	275
TseI	GCWGC	1 cut(s)	703
Tsp45I	GTSAC	1 cut(s)	275
TspDTI	ATGAA	2 cut(s)	395, 563
TspRI	CASTG	1 cut(s)	48
VpaK11BI	GGWCC	3 cut(s)	173, 422, 439
XapI	RAATTY	1 cut(s)	209
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XspI	CTAG	1 cut(s)	545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.