Rh6CG009200

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0009646
Physical Location & Seq
Reverse (-)
1104690 .. 1110115
5426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG009200.1

Sequence Viewer

Length: 1188 bp
ATGGCCGACGAGTATGTCCTCATTCCAAACGGAGAAGAAGACCATGCAGTCATCGCCACCACTCCCAAGCCTCCACGTGTCGCCTCCCTCGACGTCTTCCGCGGCCTCTGCGTCTTCCTGATGATGGTGGTGGATTACGGCGGCTCGATTATTCCGGCGATTACTCATTCGCCGTGGAACGGTCTCCGCTTGGCTGACTTTGTGATGCCGTTCTTTCTCTTCATTGCCGGAGTTTCTCTTGCTCTGGTCTACAAGAGAGTGACTAACAGAGTGGAAGCTACATGGAAGGCCGTCTTTCGGGCCCTTAAACTTTTTCTCTTAGGCGTTTTTCTTCAAGGTGGTTATTTTCATGGAGTGAGTTCCTTGACTTATGGAGTTGACATTGAAAGAATACGGTGGTTTGGCATTTTGCAGAGGATAGCCATTGGATATATTGTTGCGGCTTTATGCGAAATCTGGCTTTCACATCGGACCTCGAGGGAAGTGGGGTTTTTCAGGAGCTATTACTGGCACTGGTGTGTCATCTTTTTGTTATCAGCAATATACGCTGGGTTGCTGTATGGTTTGTATGTTCCAGATTGGGAATTCAAAGCATCAACACCTACCTCTTTGCCTCCTTCTGATGATACTCATGTTTACGCGGTGAAATGTTCTCTGAGAGGAGATCTTGGACCCGCTTGTAATTCTGCTGGGATGATTGATCGTTACATTGTGGGTGTTGATCATCTATATTCAAAACCCGTTTACAGGAACCTGAAGGATTGCAATATGTCTACTGATGGTCGCATTCCAGAGAGTTCGCCTTCATGGTGTCATACTCCTTTTGATCCTGAAGGTATATTAAGCACCCTAACAGCAGCAGTGACTTGCATAATTGGACTTCAATATGGTCACATTCTTGCACACATACAGGACCACAAAGGGCGCCTAAATATTTGGTCCCTGTTTTCAGTTTCAATGTTTGTCCTTGGATCATTTCTTGCCTTCATAGGTGTTCCTGTAAATAAATCTCTGTACACCATCAGTTATATGCTAATTACTTCTGCATCTGCAGGAATGACATTTTGCGCTCTATATCTGCTGGTCAGTTTTAAGAGTTTAGTCTTGTCATTTGAAGTGATACCTATACAGCTATACATGTCTATTGCTTTATCATTTTCACAATGCTTTCTGTCTATGGTGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

395

Amino Acids

44.09

Weight (kDa)

7.58

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HGSNAT_cat PF07786 26 - 150 3.4e-06 Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 14, 47
AatII GACGTC 1 cut(s) 96
AbsI CCTCGAGG 1 cut(s) 475
AccB1I GGYRCC 1 cut(s) 924
AccI GTMKAC 2 cut(s) 249, 773
AccII CGCG 2 cut(s) 102, 641
AciI CCGC 7 cut(s) 100, 102, 141, 187, 440, 641, 675
AclWI GGATC 2 cut(s) 821, 979
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 584
AcuI CTGAAG 2 cut(s) 776, 852
AcvI CACGTG 1 cut(s) 77
AcyI GRCGYC 2 cut(s) 93, 925
AfaI GTAC 1 cut(s) 1016
AfiI CCNNNNNNNGG 4 cut(s) 124, 179, 297, 747
AflIII ACRYGT 2 cut(s) 76, 1137
AgsI TTSAA 7 cut(s) 335, 386, 589, 735, 884, 957, 1115
AleI CACNNNNGTG 1 cut(s) 516
AluBI AGCT 3 cut(s) 278, 501, 1132
AluI AGCT 3 cut(s) 278, 501, 1132
Alw26I GTCTC 1 cut(s) 188
AlwI GGATC 2 cut(s) 821, 979
Ama87I CYCGRG 1 cut(s) 475
AoxI GGCC 4 cut(s) 3, 103, 288, 300
ApaI GGGCCC 1 cut(s) 304
ApeKI GCWGC 1 cut(s) 857
ApoI RAATTY 1 cut(s) 584
AspLEI GCGC 2 cut(s) 927, 1070
AspS9I GGNCC 6 cut(s) 300, 301, 471, 671, 913, 939
AsuHPI GGTGA 1 cut(s) 655
AvaI CYCGRG 1 cut(s) 475
AvaII GGWCC 4 cut(s) 471, 671, 913, 939
BaeGI GKGCMC 1 cut(s) 304
BaeI ACNNNNGTAYC 2 cut(s) 618, 651
BanI GGYRCC 1 cut(s) 924
BanII GRGCYC 1 cut(s) 304
BbrPI CACGTG 1 cut(s) 77
BbsI GAAGAC 3 cut(s) 45, 88, 106
BbvI GCAGC 1 cut(s) 869
BccI CCATC 3 cut(s) 118, 773, 1028
BceAI ACGGC 4 cut(s) 154, 157, 193, 275
BclI TGATCA 1 cut(s) 721
BcoDI GTCTC 1 cut(s) 188
BfmI CTRYAG 1 cut(s) 1050
BfoI RGCGCY 1 cut(s) 928
BglII AGATCT 1 cut(s) 664
BisI GCNGC 4 cut(s) 103, 142, 441, 858
BlsI GCNGC 4 cut(s) 104, 143, 442, 859
Bme18I GGWCC 4 cut(s) 471, 671, 913, 939
BmeT110I CYCGRG 1 cut(s) 475
BmgT120I GGNCC 6 cut(s) 300, 301, 471, 671, 913, 939
BmiI GGNNCC 5 cut(s) 302, 673, 752, 926, 941
BmsI GCATC 3 cut(s) 195, 602, 1055
BpiI GAAGAC 3 cut(s) 45, 88, 106
BsaAI YACGTR 1 cut(s) 77
BsaHI GRCGYC 2 cut(s) 93, 925
BsaI GGTCTC 1 cut(s) 188
BsaJI CCNNGG 3 cut(s) 100, 173, 967
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 179, 297, 747
Bse1I ACTGG 2 cut(s) 512, 518
Bse3DI GCAATG 1 cut(s) 222
BseDI CCNNGG 3 cut(s) 100, 173, 967
BseGI GGATG 1 cut(s) 699
BseLI CCNNNNNNNGG 4 cut(s) 124, 179, 297, 747
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 1 cut(s) 647
BseNI ACTGG 2 cut(s) 512, 518
BseRI GAGGAG 1 cut(s) 675
BseSI GKGCMC 1 cut(s) 304
BseXI GCAGC 1 cut(s) 869
BseYI CCCAGC 2 cut(s) 548, 689
Bsh1236I CGCG 2 cut(s) 102, 641
BshFI GGCC 4 cut(s) 5, 105, 290, 302
BshNI GGYRCC 1 cut(s) 924
BsiHKCI CYCGRG 1 cut(s) 475
BsiSI CCGG 2 cut(s) 155, 228
BslFI GGGAC 1 cut(s) 925
BslI CCNNNNNNNGG 4 cut(s) 124, 179, 297, 747
BsmAI GTCTC 1 cut(s) 188
BsmFI GGGAC 1 cut(s) 925
BsmI GAATGC 1 cut(s) 786
BsnI GGCC 4 cut(s) 5, 105, 290, 302
Bso31I GGTCTC 1 cut(s) 188
BsoBI CYCGRG 1 cut(s) 475
Bsp120I GGGCCC 1 cut(s) 300
Bsp1286I GDGCHC 1 cut(s) 304
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 5 cut(s) 664, 700, 721, 826, 971
BspACI CCGC 7 cut(s) 100, 102, 141, 187, 440, 641, 675
BspANI GGCC 4 cut(s) 5, 105, 290, 302
BspCNI CTCAG 1 cut(s) 648
BspFNI CGCG 2 cut(s) 102, 641
BspLI GGNNCC 5 cut(s) 302, 673, 752, 926, 941
BspMAI CTGCAG 1 cut(s) 1054
BspPI GGATC 2 cut(s) 821, 979
BspT107I GGYRCC 1 cut(s) 924
BspTNI GGTCTC 1 cut(s) 188
BsrDI GCAATG 1 cut(s) 222
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 2 cut(s) 512, 518
BssECI CCNNGG 3 cut(s) 100, 173, 967
BssMI GATC 5 cut(s) 664, 700, 721, 826, 971
BssNI GRCGYC 2 cut(s) 93, 925
BssT1I CCWWGG 1 cut(s) 967
Bst4CI ACNGT 2 cut(s) 182, 396
Bst6I CTCTTC 1 cut(s) 224
BstACI GRCGYC 2 cut(s) 93, 925
BstAUI TGTACA 1 cut(s) 1014
BstBAI YACGTR 1 cut(s) 77
BstDEI CTNAG 2 cut(s) 319, 656
BstDSI CCRYGG 2 cut(s) 100, 173
BstF5I GGATG 1 cut(s) 699
BstFNI CGCG 2 cut(s) 102, 641
BstH2I RGCGCY 1 cut(s) 928
BstHHI GCGC 2 cut(s) 927, 1070
BstKTI GATC 5 cut(s) 667, 703, 724, 829, 974
BstMAI GTCTC 1 cut(s) 188
BstMBI GATC 5 cut(s) 664, 700, 721, 826, 971
BstMWI GCNNNNNNNGC 3 cut(s) 53, 108, 545
BstNSI RCATGY 1 cut(s) 1141
BstSFI CTRYAG 1 cut(s) 1050
BstSLI GKGCMC 1 cut(s) 304
BstUI CGCG 2 cut(s) 102, 641
BstV1I GCAGC 1 cut(s) 869
BstV2I GAAGAC 3 cut(s) 45, 88, 106
BstX2I RGATCY 1 cut(s) 664
BstYI RGATCY 1 cut(s) 664
BsuRI GGCC 4 cut(s) 5, 105, 290, 302
BtgI CCRYGG 2 cut(s) 100, 173
BtgZI GCGATG 1 cut(s) 37
BtsCI GGATG 1 cut(s) 699
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 2 cut(s) 511, 867
CfoI GCGC 2 cut(s) 927, 1070
Cfr13I GGNCC 6 cut(s) 300, 301, 471, 671, 913, 939
Cfr42I CCGCGG 1 cut(s) 103
CseI GACGC 1 cut(s) 100
Csp6I GTAC 1 cut(s) 1015
CviAII CATG 6 cut(s) 44, 282, 350, 632, 807, 1138
CviQI GTAC 1 cut(s) 1015
DdeI CTNAG 2 cut(s) 319, 656
DinI GGCGCC 1 cut(s) 926
DpnI GATC 5 cut(s) 666, 702, 723, 828, 973
DpnII GATC 5 cut(s) 664, 700, 721, 826, 971
DrdI GACNNNNNNGTC 2 cut(s) 14, 47
DseDI GACNNNNNNGTC 2 cut(s) 14, 47
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 224
EarI CTCTTC 1 cut(s) 224
Eco130I CCWWGG 1 cut(s) 967
Eco24I GRGCYC 1 cut(s) 304
Eco31I GGTCTC 1 cut(s) 188
Eco47I GGWCC 4 cut(s) 471, 671, 913, 939
Eco57I CTGAAG 2 cut(s) 776, 852
Eco72I CACGTG 1 cut(s) 77
Eco88I CYCGRG 1 cut(s) 475
EcoO109I RGGNCCY 1 cut(s) 301
EcoRI GAATTC 1 cut(s) 584
EcoT14I CCWWGG 1 cut(s) 967
EcoT38I GRGCYC 1 cut(s) 304
EgeI GGCGCC 1 cut(s) 926
EheI GGCGCC 1 cut(s) 926
ErhI CCWWGG 1 cut(s) 967
FaeI CATG 6 cut(s) 47, 285, 353, 635, 810, 1141
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FaqI GGGAC 1 cut(s) 925
FatI CATG 6 cut(s) 43, 281, 349, 631, 806, 1137
FauI CCCGC 1 cut(s) 682
FbaI TGATCA 1 cut(s) 721
FblI GTMKAC 2 cut(s) 249, 773
Fnu4HI GCNGC 4 cut(s) 103, 142, 441, 858
FokI GGATG 1 cut(s) 706
FriOI GRGCYC 1 cut(s) 304
Fsp4HI GCNGC 4 cut(s) 103, 142, 441, 858
GlaI GCGC 2 cut(s) 926, 1069
GluI GCNGC 4 cut(s) 103, 142, 441, 858
GsaI CCCAGC 2 cut(s) 552, 693
HaeII RGCGCY 1 cut(s) 928
HaeIII GGCC 4 cut(s) 5, 105, 290, 302
HapII CCGG 2 cut(s) 155, 228
HgaI GACGC 1 cut(s) 100
HhaI GCGC 2 cut(s) 927, 1070
Hin1I GRCGYC 2 cut(s) 93, 925
Hin1II CATG 6 cut(s) 47, 285, 353, 635, 810, 1141
Hin6I GCGC 2 cut(s) 925, 1068
HinP1I GCGC 2 cut(s) 925, 1068
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HpaII CCGG 2 cut(s) 155, 228
HphI GGTGA 1 cut(s) 655
Hpy166II GTNNAC 6 cut(s) 250, 379, 637, 745, 774, 1017
Hpy188I TCNGA 3 cut(s) 471, 622, 657
Hpy188III TCNNGA 5 cut(s) 118, 496, 575, 791, 830
Hpy8I GTNNAC 6 cut(s) 250, 379, 637, 745, 774, 1017
Hpy99I CGWCG 2 cut(s) 11, 95
HpyAV CCTTC 6 cut(s) 280, 627, 751, 813, 827, 994
HpyCH4III ACNGT 2 cut(s) 182, 396
HpyCH4IV ACGT 2 cut(s) 76, 93
HpyCH4V TGCA 7 cut(s) 47, 412, 765, 870, 902, 1046, 1052
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 108, 545
HpyF3I CTNAG 2 cut(s) 319, 656
HpySE526I ACGT 2 cut(s) 76, 93
Hsp92I GRCGYC 2 cut(s) 93, 925
Hsp92II CATG 6 cut(s) 47, 285, 353, 635, 810, 1141
HspAI GCGC 2 cut(s) 925, 1068
KasI GGCGCC 1 cut(s) 924
Ksp22I TGATCA 1 cut(s) 721
KspI CCGCGG 1 cut(s) 103
Kzo9I GATC 5 cut(s) 664, 700, 721, 826, 971
LmnI GCTCC 1 cut(s) 498
Lsp1109I GCAGC 1 cut(s) 869
LweI GCATC 3 cut(s) 195, 602, 1055
MaeII ACGT 2 cut(s) 76, 93
MaeIII GTNAC 5 cut(s) 259, 704, 862, 890, 1180
MalI GATC 5 cut(s) 666, 702, 723, 828, 973
MboI GATC 5 cut(s) 664, 700, 721, 826, 971
MboII GAAGA 6 cut(s) 47, 50, 88, 106, 211, 323
MflI RGATCY 1 cut(s) 664
MhlI GDGCHC 1 cut(s) 304
MluCI AATT 4 cut(s) 584, 682, 873, 1035
Mly113I GGCGCC 1 cut(s) 925
MseI TTAA 3 cut(s) 306, 842, 1092
MslI CAYNNNNRTG 1 cut(s) 516
MspA1I CMGCKG 1 cut(s) 102
MspI CCGG 2 cut(s) 155, 228
Mva1269I GAATGC 1 cut(s) 786
MvnI CGCG 2 cut(s) 102, 641
MwoI GCNNNNNNNGC 3 cut(s) 53, 108, 545
NarI GGCGCC 1 cut(s) 925
NdeII GATC 5 cut(s) 664, 700, 721, 826, 971
NlaIII CATG 6 cut(s) 47, 285, 353, 635, 810, 1141
NlaIV GGNNCC 5 cut(s) 302, 673, 752, 926, 941
NmuCI GTSAC 4 cut(s) 259, 862, 890, 1180
NspI RCATGY 1 cut(s) 1141
OliI CACNNNNGTG 1 cut(s) 516
PaeR7I CTCGAG 1 cut(s) 475
PciI ACATGT 1 cut(s) 1137
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 1 cut(s) 786
PkrI GCNGC 4 cut(s) 104, 143, 442, 859
PluTI GGCGCC 1 cut(s) 928
PmaCI CACGTG 1 cut(s) 77
PmlI CACGTG 1 cut(s) 77
Ppu21I YACGTR 1 cut(s) 77
PscI ACATGT 1 cut(s) 1137
PspCI CACGTG 1 cut(s) 77
PspFI CCCAGC 2 cut(s) 548, 689
PspN4I GGNNCC 5 cut(s) 302, 673, 752, 926, 941
PspOMI GGGCCC 1 cut(s) 300
PspPI GGNCC 6 cut(s) 300, 301, 471, 671, 913, 939
PspXI VCTCGAGB 1 cut(s) 475
PstI CTGCAG 1 cut(s) 1054
PsuI RGATCY 1 cut(s) 664
RsaI GTAC 1 cut(s) 1016
RsaNI GTAC 1 cut(s) 1015
RseI CAYNNNNRTG 1 cut(s) 516
SacII CCGCGG 1 cut(s) 103
SaqAI TTAA 3 cut(s) 306, 842, 1092
SatI GCNGC 4 cut(s) 103, 142, 441, 858
Sau3AI GATC 5 cut(s) 664, 700, 721, 826, 971
Sau96I GGNCC 6 cut(s) 300, 301, 471, 671, 913, 939
SduI GDGCHC 1 cut(s) 304
SfaNI GCATC 3 cut(s) 195, 602, 1055
SfcI CTRYAG 1 cut(s) 1050
SfoI GGCGCC 1 cut(s) 926
Sfr274I CTCGAG 1 cut(s) 475
Sfr303I CCGCGG 1 cut(s) 103
SgrBI CCGCGG 1 cut(s) 103
SinI GGWCC 4 cut(s) 471, 671, 913, 939
SlaI CTCGAG 1 cut(s) 475
SmiMI CAYNNNNRTG 1 cut(s) 516
SmlI CTYRAG 1 cut(s) 475
SmoI CTYRAG 1 cut(s) 475
Sse9I AATT 4 cut(s) 584, 682, 873, 1035
SsiI CCGC 7 cut(s) 100, 102, 141, 187, 440, 641, 675
SspDI GGCGCC 1 cut(s) 924
SspI AATATT 1 cut(s) 934
StyI CCWWGG 1 cut(s) 967
TaaI ACNGT 2 cut(s) 182, 396
TaiI ACGT 2 cut(s) 79, 96
TaqI TCGA 3 cut(s) 90, 146, 476
TasI AATT 4 cut(s) 584, 682, 873, 1035
TatI WGTACW 1 cut(s) 1014
TauI GCSGC 3 cut(s) 105, 144, 443
Tru1I TTAA 3 cut(s) 306, 842, 1092
Tru9I TTAA 3 cut(s) 306, 842, 1092
TscAI CASTG 2 cut(s) 518, 867
TseFI GTSAC 4 cut(s) 259, 862, 890, 1180
TseI GCWGC 1 cut(s) 857
Tsp45I GTSAC 4 cut(s) 259, 862, 890, 1180
TspDTI ATGAA 4 cut(s) 211, 338, 795, 976
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 2 cut(s) 518, 867
VpaK11BI GGWCC 4 cut(s) 471, 671, 913, 939
XapI RAATTY 1 cut(s) 584
XceI RCATGY 1 cut(s) 1141
XhoI CTCGAG 1 cut(s) 475
XmiI GTMKAC 2 cut(s) 249, 773
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.